{"meta":{"query_hash":"50b75acbea9a","filters":{"topic":"Immune Response and Inflammation"},"cohort_total":1935,"direct_labels_cover":2,"predictions_cover":1935,"exported":1935,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/50b75acbea9a","api":"https://metacan.xera.ac/api/v1/cohort?topic=Immune+Response+and+Inflammation"},"results":[{"id":"W1000939785","doi":"10.3233/ch-2008-1073","title":"Effects of N-acetylcysteine and tirilazad mesylate on intestinal functional capillary density, leukocyte adherence, mesenteric plasma extravasation and cytokine levels in experimental endotoxemia in rats","year":2008,"lang":"en","type":"article","venue":"Clinical Hemorheology and Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Victoria General Hospital; Dalhousie University","funders":"","keywords":"Extravasation; Medicine; Intravital microscopy; Cytokine; Tumor necrosis factor alpha; Malondialdehyde; Intestinal mucosa; Internal medicine; Endocrinology; Microcirculation; Pathology; Oxidative stress","score_opus":0.03709535530129232,"score_gpt":0.2876576985636404,"score_spread":0.25056234326234805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1000939785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984938,0.00082665536,0.00023666765,0.00006235412,0.000024284971,0.00003971233,0.00011873903,0.000035124038,0.00016260904],"genre_scores_gemma":[0.9951763,0.0013957185,0.0014579202,0.00011333317,0.000045517227,0.00016779198,0.0003652318,0.000012232117,0.001265808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997632,0.000041652285,0.000028924176,0.000046056182,0.000048071644,0.0000721184],"domain_scores_gemma":[0.9994855,0.000041630108,0.00019684515,0.000052214065,0.000052685904,0.00017112496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032883216,0.0007227372,0.0008978217,0.0004562022,0.00021733501,0.00021240521,0.00037598374,0.00055730686,0.0011343689],"category_scores_gemma":[0.00034554658,0.00030740935,0.00047053548,0.00017903531,0.00049776596,0.00042955557,0.00021318025,0.00085030636,0.00020439891],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.037212897,0.0036294493,0.0020579707,0.00025782513,0.00009894703,0.00017228695,0.00008300158,0.00020917482,0.94733596,0.00006709908,0.00014265993,0.008732748],"study_design_scores_gemma":[0.001660374,0.08212199,0.017730953,0.000026471182,0.00019762073,0.00032054685,0.00010894155,0.0008383784,0.8953294,0.00006344985,0.0015644667,0.00003735877],"about_ca_topic_score_codex":0.00059453206,"about_ca_topic_score_gemma":0.000951338,"teacher_disagreement_score":0.0011343689,"about_ca_system_score_codex":0.0002695722,"about_ca_system_score_gemma":0.0005372928,"threshold_uncertainty_score":0.003794849},"labels":[],"label_agreement":null},{"id":"W1016066146","doi":"10.1016/j.mvr.2015.06.004","title":"Experimental TLR4 inhibition improves intestinal microcirculation in endotoxemic rats","year":2015,"lang":"en","type":"article","venue":"Microvascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Microcirculation; TLR4; Intravital microscopy; Lipopolysaccharide; Perfusion; Cytokine; Sepsis; Antagonist; Internal medicine; Endocrinology; Medicine; Inflammation; Receptor; Immunology","score_opus":0.07335272145623967,"score_gpt":0.34412594364319216,"score_spread":0.2707732221869525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1016066146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963887,0.0007332003,0.0014699787,0.0003459887,0.000148633,0.000036689355,0.000226286,0.00013292713,0.0005176319],"genre_scores_gemma":[0.9925323,0.0011903151,0.0019335249,0.0001854227,0.00009182976,0.00014746617,0.0004078461,0.000029234958,0.0034820363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997725,0.00003112761,0.000021030522,0.000043362885,0.000035452693,0.00009668562],"domain_scores_gemma":[0.9996259,0.00002914564,0.00011887479,0.000041501728,0.00002994342,0.00015459252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027155562,0.0011518268,0.0009346753,0.00054706796,0.00039661434,0.00035553315,0.00049953884,0.00067897525,0.0031255896],"category_scores_gemma":[0.00026231984,0.00034088598,0.0006510222,0.00024787558,0.00075747556,0.0007052221,0.00042263092,0.002262358,0.00034381423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.021046992,0.0019716697,0.0005255224,0.00021299752,0.00004726374,0.00024791982,0.00006661862,0.00024927166,0.9683069,0.00029604477,0.0002809983,0.0067478423],"study_design_scores_gemma":[0.0010315544,0.012593131,0.007101399,0.000035492383,0.00022687424,0.00028268335,0.00023912404,0.0016387536,0.9742139,0.0004048731,0.0021954495,0.000036802903],"about_ca_topic_score_codex":0.0006143747,"about_ca_topic_score_gemma":0.0007702788,"teacher_disagreement_score":0.0031255896,"about_ca_system_score_codex":0.00040475497,"about_ca_system_score_gemma":0.000617338,"threshold_uncertainty_score":0.010456085},"labels":[],"label_agreement":null},{"id":"W1016323489","doi":"10.1097/shk.0000000000000430","title":"TEMPORAL LINKS BETWEEN ENDOTOXIN ACTIVITY LEVELS AND INTERLEUKIN 6 CONCENTRATIONS IN ABDOMINAL SEPSIS","year":2015,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hudbay Minerals (Canada)","funders":"","keywords":"Medicine; Peritonitis; Sepsis; Pathophysiology; Gastroenterology; Internal medicine; Interleukin; Immune system; Concomitant; Prospective cohort study; Cytokine; Abdominal surgery; Immunology","score_opus":0.04514622776759107,"score_gpt":0.2889174221153578,"score_spread":0.24377119434776673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1016323489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989127,0.00047345532,0.00039833778,0.000014597997,0.000003921948,0.000004314748,0.000046458972,0.0000037658242,0.00014257678],"genre_scores_gemma":[0.9995198,0.0001223108,0.00021751007,0.000010710142,0.000008566021,0.0000062160943,0.00006548274,0.000001048105,0.000048431157],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994143,0.00024643508,0.0000747813,0.000102546095,0.00009235307,0.00006950345],"domain_scores_gemma":[0.9961112,0.0012916187,0.0018347802,0.00019528237,0.00022179964,0.00034536692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073597673,0.00020319707,0.00030705202,0.00056672364,0.00016797596,0.00044829954,0.00012172224,0.00043186816,0.0007267313],"category_scores_gemma":[0.003648007,0.00016866498,0.0001759394,0.0004662928,0.00032758678,0.0003096977,0.00030217782,0.0005729369,0.00016252427],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003137422,0.00013013494,0.9757522,0.000057524147,0.00006106449,0.0004170158,0.00028262526,0.00019812954,0.01280264,0.00005792209,0.000035774825,0.0070674885],"study_design_scores_gemma":[0.000017723092,0.0015208308,0.9946095,0.000007329786,0.000037946673,0.00083045993,0.00014482842,0.00030455948,0.0022620584,0.000066147935,0.00018643128,0.0000122562715],"about_ca_topic_score_codex":0.00025235413,"about_ca_topic_score_gemma":0.00030749934,"teacher_disagreement_score":0.00073597673,"about_ca_system_score_codex":0.00012875284,"about_ca_system_score_gemma":0.00016537517,"threshold_uncertainty_score":0.0038923025},"labels":[],"label_agreement":null},{"id":"W1019982434","doi":"","title":"Toll-like receptors and sepsis","year":2007,"lang":"en","type":"article","venue":"Pure Amsterdam UMC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Toll; Sepsis; Receptor; Immunology; Medicine; Computer science; Internal medicine","score_opus":0.007771421272084892,"score_gpt":0.23488613319997562,"score_spread":0.22711471192789073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1019982434","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019178187,0.9300338,0.00042489442,0.022513632,0.0036529049,0.000010155186,0.00008389886,0.00003136935,0.024071053],"genre_scores_gemma":[0.32834992,0.5498079,0.0011115584,0.004566429,0.011777774,0.000049521055,0.00021313544,0.00003674825,0.10408697],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998405,0.000072547955,0.000012534607,0.00001480384,0.00003754783,0.000022057155],"domain_scores_gemma":[0.99988043,0.000051393297,0.000013417539,0.000008084526,0.000016958124,0.000029669818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054595113,0.00031095897,0.0003744326,0.00072391564,0.0002301525,0.0009994978,0.00018637712,0.001129641,0.0059336904],"category_scores_gemma":[0.0006833584,0.00019124468,0.00011135814,0.0003344804,0.00059681805,0.0005719592,0.00052918383,0.00094360934,0.00095957046],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018921464,0.00042285756,0.0054572835,0.0019304281,0.00019538644,0.0031268017,0.00086800946,0.0013131162,0.021055928,0.09403522,0.28110224,0.58860064],"study_design_scores_gemma":[0.00015095546,0.00032747813,0.016616104,0.0019106378,0.00007921484,0.005864944,0.00048453922,0.0015560561,0.004066437,0.05210859,0.91678315,0.000051899257],"about_ca_topic_score_codex":0.00093013473,"about_ca_topic_score_gemma":0.00095210876,"teacher_disagreement_score":0.0059336904,"about_ca_system_score_codex":0.00045951654,"about_ca_system_score_gemma":0.00038723776,"threshold_uncertainty_score":0.019850194},"labels":[],"label_agreement":null},{"id":"W104083718","doi":"10.2119/molmed.2012.00033","title":"R-roscovitine Reduces Lung Inflammation Induced by Lipoteichoic Acid and Streptococcus pneumoniae","year":2012,"lang":"en","type":"article","venue":"Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"College of Medicine, University of Cincinnati; Cincinnati Children's Hospital Medical Center","keywords":"Lipoteichoic acid; Proinflammatory cytokine; Streptococcus pneumoniae; Immunology; Biology; Apoptosis; Inflammation; Bronchoalveolar lavage; Microbiology; Lung; Medicine; Antibiotics; Staphylococcus aureus; Internal medicine; Biochemistry","score_opus":0.007580190862648992,"score_gpt":0.25136884313766616,"score_spread":0.24378865227501717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W104083718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919504,0.0055192527,0.00053313497,0.00009112844,0.00006327145,0.000055176075,0.00019232847,0.0000975956,0.0014978037],"genre_scores_gemma":[0.99351573,0.0025251633,0.0005981911,0.00006663955,0.000023030187,0.000048104434,0.00060435466,0.000016485337,0.0026022475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985075,0.00003844429,0.00001617896,0.0000170101,0.000031459265,0.000046100246],"domain_scores_gemma":[0.9998989,0.0000114895665,0.000022335324,0.000013416635,0.000020102472,0.00003374035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121592195,0.00043052633,0.00042927617,0.00023116611,0.00012286774,0.00021967484,0.00029409115,0.00032797648,0.0011666352],"category_scores_gemma":[0.00020349215,0.00010274282,0.00028159638,0.00016076732,0.00019306657,0.00019553333,0.00018433442,0.00069348287,0.0003143918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031434384,0.0009425505,0.00035998307,0.00018516809,0.00004653627,0.00009050365,0.00003146961,0.00014509537,0.9863754,0.00009559027,0.00021957715,0.008364722],"study_design_scores_gemma":[0.00032188467,0.010412136,0.012833506,0.00002998257,0.00009395543,0.00036325149,0.00006367901,0.00083698134,0.96955854,0.00006225456,0.005411763,0.000012023989],"about_ca_topic_score_codex":0.0010033242,"about_ca_topic_score_gemma":0.0016825693,"teacher_disagreement_score":0.0011666352,"about_ca_system_score_codex":0.00020974585,"about_ca_system_score_gemma":0.00034687424,"threshold_uncertainty_score":0.003902793},"labels":[],"label_agreement":null},{"id":"W111085397","doi":"10.4049/jimmunol.190.supp.63.17","title":"Regulatory T cell dysfunction in lipocalin 2 knockout mice exacerbates serum-induced arthritis (P1326)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"FOXP3; Arthritis; Immunology; Rheumatoid arthritis; Proinflammatory cytokine; CD11c; Inflammation; T cell; Regulatory T cell; Population; Immune system; Knockout mouse; Splenocyte; IL-2 receptor; Medicine; Innate immune system; Biology; Internal medicine; Phenotype; Receptor","score_opus":0.0066099185832974505,"score_gpt":0.1946627204751937,"score_spread":0.18805280189189624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W111085397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99413365,0.0011669846,0.0021791374,0.00019536045,0.00007670867,0.000064552194,0.00087645627,0.00030091,0.0010064406],"genre_scores_gemma":[0.9898678,0.00069060817,0.002875468,0.00016691475,0.000056473185,0.00016397977,0.000912198,0.0001234886,0.0051430557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995365,0.000073269075,0.000059496928,0.00012588897,0.000103486396,0.00010136765],"domain_scores_gemma":[0.99945813,0.000036792346,0.00021442915,0.000027113147,0.000029467776,0.00023405481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002779602,0.0015722876,0.00070490723,0.0010058082,0.00033534787,0.00044755856,0.00031617816,0.00093510293,0.0036727602],"category_scores_gemma":[0.0002034776,0.00042053795,0.0004993584,0.00025839685,0.00074729766,0.00041603102,0.00036265215,0.0015314099,0.0008786211],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005183332,0.00008699261,0.00027719323,0.00007752468,0.000007829491,0.00029635718,0.000022812677,0.000045418037,0.9980014,0.000056281875,0.000054381602,0.0005553434],"study_design_scores_gemma":[0.0006009856,0.0037055907,0.034625635,0.000093229726,0.00017639027,0.006110232,0.00028432554,0.0030887243,0.9460276,0.0003365294,0.0049097044,0.000041100553],"about_ca_topic_score_codex":0.0004588672,"about_ca_topic_score_gemma":0.0007471734,"teacher_disagreement_score":0.0036727602,"about_ca_system_score_codex":0.00037545362,"about_ca_system_score_gemma":0.0002848257,"threshold_uncertainty_score":0.012286544},"labels":[],"label_agreement":null},{"id":"W1128250901","doi":"","title":"Correlation of Loxl1 Expression in Lens Epithelial Cells With Clinical Signs of Pseudoexfoliation","year":2010,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"","keywords":"Pseudoexfoliation; Correlation; Ophthalmology; Expression (computer science); Medicine; Lens (geology); Pathology; Biology; Optometry; Computer science; Mathematics; Glaucoma","score_opus":0.03167062004052533,"score_gpt":0.32970956224233927,"score_spread":0.29803894220181393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1128250901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982054,0.00045868816,0.00029541398,0.000055682718,0.000007750766,0.000010385945,0.00014385235,0.000014409806,0.00080841634],"genre_scores_gemma":[0.99936205,0.00007537998,0.00014115038,0.000018280514,0.0000050340354,0.00000573456,0.00009872254,0.0000011228585,0.00029256134],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99974614,0.000042685573,0.00004801117,0.00004444527,0.00005986426,0.000058851114],"domain_scores_gemma":[0.998998,0.0003608585,0.00031307575,0.00005042687,0.00013453334,0.00014307347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034071377,0.0001556638,0.00024566866,0.000902135,0.00024126362,0.00044262482,0.00012968622,0.00044196838,0.0025252781],"category_scores_gemma":[0.00072231406,0.000118045995,0.00014792813,0.00033260902,0.0004308377,0.00026924803,0.00016617072,0.000464901,0.00028296976],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003912686,0.00021505966,0.425187,0.00018225976,0.00006229147,0.009864877,0.00059462746,0.00007361853,0.5531703,0.00026820513,0.00025370554,0.006215348],"study_design_scores_gemma":[0.00005394857,0.00074228435,0.828404,0.000017962673,0.000059769063,0.022656398,0.00095571374,0.00060020934,0.1451485,0.00016692266,0.001174082,0.000020223635],"about_ca_topic_score_codex":0.0004313072,"about_ca_topic_score_gemma":0.00046349366,"teacher_disagreement_score":0.0025252781,"about_ca_system_score_codex":0.00025600716,"about_ca_system_score_gemma":0.0001419948,"threshold_uncertainty_score":0.0084478855},"labels":[],"label_agreement":null},{"id":"W1140001397","doi":"10.1159/000430351","title":"The Innate Immune Receptor CD14 Mediates Lymphocyte Migration in EAE","year":2015,"lang":"en","type":"article","venue":"Cellular Physiology and Biochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Experimental autoimmune encephalomyelitis; Immunology; CD14; Innate immune system; Immune system; Multiple sclerosis; Biology; Innate lymphoid cell; Autoimmune disease; Inflammation; T cell; Medicine; Antibody","score_opus":0.006606253123857187,"score_gpt":0.19752667052804987,"score_spread":0.1909204174041927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1140001397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99038905,0.004430474,0.003187864,0.00015373917,0.000048636986,0.000043559096,0.0001463323,0.000047796988,0.0015524885],"genre_scores_gemma":[0.9934487,0.0018630865,0.002453123,0.00005248703,0.000037762904,0.00006411446,0.00021773076,0.000011823911,0.00185125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999816,0.000041346997,0.000020455565,0.00002891048,0.000034518886,0.000058663467],"domain_scores_gemma":[0.99986434,0.000014277394,0.000037603768,0.000012061531,0.00002903157,0.000042687363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018553261,0.0005784822,0.00029367983,0.00037922055,0.00018838585,0.00026537903,0.00025042493,0.00043547797,0.0019305951],"category_scores_gemma":[0.00015195289,0.00013008837,0.00029523368,0.00011149298,0.00023563785,0.00029271236,0.00038232908,0.0005996727,0.00070844666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005385348,0.00009835528,0.00087452435,0.00015586447,0.000008868891,0.00022117468,0.000020773843,0.000060954917,0.9948944,0.00017364821,0.00007183881,0.002881026],"study_design_scores_gemma":[0.00016546296,0.0011754208,0.04363706,0.00011203666,0.000102790815,0.0020407296,0.00013624196,0.0027494363,0.94329053,0.0006811104,0.0058959504,0.000013272436],"about_ca_topic_score_codex":0.0001451147,"about_ca_topic_score_gemma":0.00017517607,"teacher_disagreement_score":0.0019305951,"about_ca_system_score_codex":0.00022391368,"about_ca_system_score_gemma":0.00020918305,"threshold_uncertainty_score":0.0064584613},"labels":[],"label_agreement":null},{"id":"W114928251","doi":"10.1096/fasebj.26.1_supplement.835.11","title":"Expression of TLR10 in human lungs and neutrophils","year":2012,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Blot; Innate immune system; TLR2; Cell biology; Endocytosis; Receptor; TLR4; Toll-like receptor; Immune system; Immunology; Signal transduction; Gene; Biochemistry","score_opus":0.012207756459842073,"score_gpt":0.24527932584710116,"score_spread":0.2330715693872591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W114928251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98360854,0.0058086216,0.002856023,0.00026226504,0.00004261346,0.00008312186,0.0014096312,0.000067750145,0.005861436],"genre_scores_gemma":[0.9853351,0.0024815735,0.003184154,0.00014676926,0.000019790923,0.00009681586,0.0019416964,0.000012974155,0.0067810942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982893,0.000031910644,0.000013326841,0.000052677628,0.000038337785,0.00003467933],"domain_scores_gemma":[0.99991286,0.000015503227,0.000022539343,0.00001373743,0.000021989435,0.0000134086995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001972561,0.00015973378,0.00012332118,0.00026975627,0.00010808624,0.00024666192,0.000099636956,0.00027663462,0.0037719517],"category_scores_gemma":[0.00020830077,0.00013231787,0.0001359995,0.000118325814,0.00012987854,0.00013799292,0.0001882072,0.00017823919,0.00095256156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006564059,0.000033293676,0.0072289645,0.00014980648,0.00001052252,0.0005868747,0.00013003638,0.00004091538,0.98213655,0.00014849445,0.00038368927,0.008494414],"study_design_scores_gemma":[0.000103407816,0.0014671951,0.19919173,0.00015552559,0.000087863664,0.016194927,0.0009800821,0.0010566012,0.74848586,0.00031018056,0.03193929,0.000027353426],"about_ca_topic_score_codex":0.00089081563,"about_ca_topic_score_gemma":0.0008246628,"teacher_disagreement_score":0.0037719517,"about_ca_system_score_codex":0.00022933522,"about_ca_system_score_gemma":0.00014409998,"threshold_uncertainty_score":0.012618482},"labels":[],"label_agreement":null},{"id":"W125558691","doi":"10.1385/1-59745-167-3:237","title":"Micromethods for the Characterization of Lipid A-Core and O-Antigen Lipopolysaccharide","year":2006,"lang":"en","type":"review","venue":"Humana Press eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Lipopolysaccharide; Bacterial outer membrane; Biogenesis; Lipid A; Escherichia coli; Bacteria; Gram-negative bacteria; Microbiology; Bacterial cell structure; Antigen; Gene; Membrane; Chemistry; Biology; Biochemistry; Genetics; Immunology","score_opus":0.12552423622847447,"score_gpt":0.35155899112971817,"score_spread":0.2260347549012437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W125558691","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016295307,0.88202405,0.09089276,0.00091628014,0.0026992003,0.00024748768,0.0003946557,0.0006116431,0.02058428],"genre_scores_gemma":[0.006708346,0.8481467,0.11487638,0.0010642082,0.00097214285,0.0007084891,0.0010400201,0.00013207727,0.026351715],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99911684,0.00011422616,0.00007744615,0.00019829448,0.00044968072,0.00004348597],"domain_scores_gemma":[0.9994295,0.0002283723,0.00007117291,0.00005287447,0.00015780043,0.0000603103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013521018,0.0021439255,0.001605167,0.004609559,0.00055301527,0.00087160565,0.0019564545,0.0016693511,0.009299244],"category_scores_gemma":[0.00090809166,0.0008259046,0.00075876765,0.0028517898,0.0010446562,0.0014892834,0.00086590555,0.0030833534,0.014929593],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071418675,0.00017091588,0.0003271949,0.005979129,0.000074394324,0.00032407328,0.000100262616,0.0007103683,0.1237008,0.009239422,0.028028958,0.831273],"study_design_scores_gemma":[0.00002546832,0.00010366997,0.0010301876,0.00045000517,0.000035808385,0.0013538325,0.000044935805,0.00043308426,0.03328737,0.0036386184,0.9595517,0.000045311826],"about_ca_topic_score_codex":0.0007975948,"about_ca_topic_score_gemma":0.0016142774,"teacher_disagreement_score":0.009299244,"about_ca_system_score_codex":0.00086521154,"about_ca_system_score_gemma":0.0011326099,"threshold_uncertainty_score":0.031109095},"labels":[],"label_agreement":null},{"id":"W125755217","doi":"10.4049/jimmunol.178.supp.43.33","title":"The T cell response to staphylococcal superantigens is modulated by the bacterial cell wall (43.33)","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Superantigen; TLR2; T cell; Microbiology; Bacteria; Biology; Cell biology; Cell; Immunology; Inflammation; TLR4; Immune system; Biochemistry","score_opus":0.005669513578539035,"score_gpt":0.2169613136624787,"score_spread":0.21129180008393966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W125755217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99710375,0.0008921734,0.00084720703,0.00007541556,0.000026676278,0.000017497367,0.00008110106,0.000020663747,0.0009355757],"genre_scores_gemma":[0.99828964,0.00037890417,0.0005292706,0.00008305665,0.000027889562,0.000018770026,0.00009780112,0.000004634985,0.0005699947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998293,0.000043465545,0.0000131640245,0.000023805254,0.000025357846,0.00006487734],"domain_scores_gemma":[0.99990237,0.000019176876,0.000022973021,0.000010403531,0.0000126939385,0.000032425127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018909057,0.00035846143,0.00024051442,0.000121047786,0.000078517296,0.00022430599,0.00008267498,0.00037395334,0.0014554738],"category_scores_gemma":[0.00013364169,0.00011582078,0.00028757864,0.00007854417,0.00018470123,0.00013479199,0.00016736126,0.00044521416,0.00041182924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011209497,0.000018056047,0.0003107967,0.000022523058,0.0000018122836,0.00007059594,0.0000066827133,0.000021280499,0.9988883,0.0000139926615,0.00001213218,0.0005218685],"study_design_scores_gemma":[0.000059000882,0.0023744046,0.04708937,0.000023365885,0.000039181952,0.0011155765,0.00008917053,0.0015766523,0.94555813,0.00018220075,0.0018835367,0.000009398737],"about_ca_topic_score_codex":0.00007423124,"about_ca_topic_score_gemma":0.00008270503,"teacher_disagreement_score":0.0014554738,"about_ca_system_score_codex":0.00012607434,"about_ca_system_score_gemma":0.00007604379,"threshold_uncertainty_score":0.0048691034},"labels":[],"label_agreement":null},{"id":"W137712776","doi":"10.1007/s00418-004-0649-1","title":"Expression of integrin subunits av and �3 in acute lung inflammation","year":2004,"lang":"en","type":"article","venue":"Histochemistry and Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation; University of Saskatchewan","keywords":"Integrin; Inflammation; Biology; Immunohistochemistry; Streptococcus pneumoniae; Endothelium; Immunology; Molecular biology; Protein subunit; Microbiology; Receptor; Biochemistry; Endocrinology; Gene","score_opus":0.004597924178960794,"score_gpt":0.21024233380307197,"score_spread":0.20564440962411118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W137712776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99032706,0.004832893,0.0021522709,0.000106031366,0.000025195299,0.0000128302545,0.00009961314,0.000029068862,0.0024150216],"genre_scores_gemma":[0.99598503,0.0011352142,0.0007437859,0.000044297998,0.000024575782,0.000017730534,0.00015557872,0.000007674031,0.0018861864],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99960953,0.000082587205,0.00002808996,0.00003965352,0.00007516611,0.0001649195],"domain_scores_gemma":[0.9997427,0.00006150142,0.000058728907,0.000028007831,0.00004838622,0.000060617323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000323695,0.00020359967,0.00024584486,0.00076205743,0.0004515335,0.0008176223,0.00020838618,0.00065478554,0.0012240368],"category_scores_gemma":[0.00041694278,0.0002968611,0.00029460245,0.0003226305,0.00035060418,0.00048907375,0.00030932354,0.0006593456,0.0003532685],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008975814,0.000030512905,0.00244838,0.00004775496,0.0000085050815,0.00036570695,0.00010152177,0.000059727696,0.99295914,0.00060550676,0.00007261706,0.0024030388],"study_design_scores_gemma":[0.0001177501,0.000952343,0.21573822,0.0000750886,0.00012574554,0.0056334133,0.0015372478,0.004447135,0.7607133,0.0021932402,0.008436222,0.000030348752],"about_ca_topic_score_codex":0.0009864592,"about_ca_topic_score_gemma":0.0012384859,"teacher_disagreement_score":0.0012240368,"about_ca_system_score_codex":0.00056511565,"about_ca_system_score_gemma":0.00018449881,"threshold_uncertainty_score":0.0041002035},"labels":[],"label_agreement":null},{"id":"W1419959473","doi":"10.4049/jimmunol.190.supp.138.19","title":"The pro-inflammatory and anti-inflammatory TLR2 responses to <i>Staphylococcus aureus</i> can be uncoupled (P1242)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"","keywords":"TLR2; Peptidoglycan; Internalization; TLR4; Toll-like receptor; Staphylococcus aureus; Microbiology; Pattern recognition receptor; Acquired immune system; Immunology; Cytokine; Lipoteichoic acid; Biology; Lipopolysaccharide; Receptor; Inflammation; Innate immune system; Immune system; Bacteria; Cell wall; Biochemistry","score_opus":0.00834154803214477,"score_gpt":0.2222180192651134,"score_spread":0.21387647123296863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1419959473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885953,0.0010462063,0.0034746302,0.00051153626,0.000133835,0.000053067946,0.0009368578,0.00020826499,0.0050402293],"genre_scores_gemma":[0.98973256,0.00041898654,0.002506479,0.00018707366,0.000034856905,0.00007449662,0.0013566073,0.00004845364,0.0056405813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997521,0.000044943466,0.000023225019,0.000039563565,0.00007132609,0.00006882035],"domain_scores_gemma":[0.99984086,0.000018294208,0.000053619122,0.000018900057,0.0000177446,0.000050565915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011988494,0.00045927,0.00030442953,0.00016479431,0.00015053712,0.0002487888,0.00028573498,0.00038064126,0.004615553],"category_scores_gemma":[0.00013565175,0.0001183556,0.0002447622,0.000113079215,0.00026820422,0.00018770379,0.00031599976,0.0008496447,0.001216472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034795012,0.00005203966,0.000075773605,0.000030067418,0.0000047851627,0.000047929843,0.0000033470556,0.00003807488,0.99825066,0.00011805363,0.00013359827,0.0008975956],"study_design_scores_gemma":[0.00009124159,0.0005677837,0.004225757,0.000011121702,0.000011073675,0.0004440272,0.00002204106,0.00094445987,0.9887177,0.0001158697,0.004840656,0.000008357828],"about_ca_topic_score_codex":0.00041366238,"about_ca_topic_score_gemma":0.0004154019,"teacher_disagreement_score":0.004615553,"about_ca_system_score_codex":0.0002892703,"about_ca_system_score_gemma":0.0002192622,"threshold_uncertainty_score":0.015440524},"labels":[],"label_agreement":null},{"id":"W1425871090","doi":"10.3233/nib-2011-002","title":"Nomenclature and Significance of Innate/Natural Immune Mechanisms and of Species Specific Resistance","year":2011,"lang":"en","type":"article","venue":"Advances in Neuroimmune Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Innate immune system; Nomenclature; Natural (archaeology); Resistance (ecology); Biology; Immunology; Immune system; Zoology; Ecology; Taxonomy (biology)","score_opus":0.011542542274783482,"score_gpt":0.22070231585251582,"score_spread":0.20915977357773233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1425871090","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15737046,0.35312602,0.18699475,0.013683507,0.0213238,0.0004743116,0.0012621974,0.0009711191,0.26479387],"genre_scores_gemma":[0.6177962,0.14477156,0.1872158,0.0062786113,0.010958924,0.0011602577,0.0017042538,0.0004084183,0.029706012],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9983199,0.0005873122,0.00028159237,0.00036415487,0.00026318102,0.00018392125],"domain_scores_gemma":[0.99799216,0.00054170616,0.00043621374,0.00031897207,0.0004184893,0.00029242286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030578196,0.00062765233,0.00080439966,0.0028998153,0.0017009047,0.0031980537,0.001580827,0.0012468084,0.0018985522],"category_scores_gemma":[0.0022623923,0.00020371775,0.0006671472,0.0024641918,0.008654874,0.0034565313,0.0016716501,0.003425083,0.0009069614],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002708717,0.00005986833,0.0027726046,0.000763426,0.000052627332,0.00039337756,0.002719439,0.0005014963,0.013070541,0.8521578,0.0072222324,0.12001584],"study_design_scores_gemma":[0.000030821488,0.00047030198,0.010302146,0.0005647406,0.00008192557,0.0033661814,0.0016258195,0.0010427585,0.0033719938,0.3587833,0.62024665,0.00011334143],"about_ca_topic_score_codex":0.0005788576,"about_ca_topic_score_gemma":0.00038615064,"teacher_disagreement_score":0.0031980537,"about_ca_system_score_codex":0.0011633238,"about_ca_system_score_gemma":0.0016992262,"threshold_uncertainty_score":0.016171515},"labels":[],"label_agreement":null},{"id":"W142593898","doi":"10.4049/jimmunol.182.supp.95.11","title":"CD146+ T lymphocytes are increased in both the peripheral circulation and in the synovial fluids of patients with various musculoskeletal diseases and may facilitate T and B interactions (95.11)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"CD146; Immunology; Molecular biology; C-C chemokine receptor type 7; In vitro; Cell biology; Chemistry; Biology; Inflammation; Chemokine; CD34; Biochemistry; Stem cell","score_opus":0.005595078711960523,"score_gpt":0.21638834933299703,"score_spread":0.2107932706210365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W142593898","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99552274,0.0017138349,0.00088798354,0.00004931532,0.000014596361,0.000019072151,0.0003725847,0.000043323504,0.0013764787],"genre_scores_gemma":[0.99677926,0.00044404223,0.0010338647,0.000055854172,0.00004106776,0.000028015556,0.00037567137,0.0000074844456,0.0012347299],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99980193,0.0000487975,0.000027222342,0.00004473437,0.000044816232,0.000032582742],"domain_scores_gemma":[0.99970645,0.00005633036,0.00011927378,0.000019598148,0.00004224916,0.000055999823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013917878,0.00025202017,0.0003386214,0.0009023843,0.00028411136,0.00038691505,0.00008982603,0.00028240323,0.0052048108],"category_scores_gemma":[0.00061333715,0.00013517335,0.00014707471,0.00057520054,0.00012195205,0.00017944514,0.00017309232,0.0002722605,0.00065355265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018609614,0.00021873608,0.58472854,0.00033761942,0.00014252581,0.0036203216,0.00045350366,0.00005743853,0.35514206,0.00012724703,0.0011074127,0.05220364],"study_design_scores_gemma":[0.000055915298,0.0008440088,0.9542114,0.000043762237,0.00012955396,0.014296294,0.0003582296,0.00028314168,0.02615663,0.0001383897,0.003470453,0.000012266198],"about_ca_topic_score_codex":0.00029442357,"about_ca_topic_score_gemma":0.000366882,"teacher_disagreement_score":0.0052048108,"about_ca_system_score_codex":0.00005787943,"about_ca_system_score_gemma":0.000053758118,"threshold_uncertainty_score":0.017411768},"labels":[],"label_agreement":null},{"id":"W1486935504","doi":"10.4049/jimmunol.1302392","title":"TRIL Is Involved in Cytokine Production in the Brain following <i>Escherichia coli</i> Infection","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Institute of Allergy and Infectious Diseases","keywords":"TLR4; TLR3; Chemokine; Innate immune system; Proinflammatory cytokine; Biology; Cytokine; Immune system; Escherichia coli infection; Escherichia coli; Immunology; In vivo; Cell biology; Mediator; Inflammation; Toll-like receptor; Gene; Biochemistry","score_opus":0.010584720666382141,"score_gpt":0.23463256243369876,"score_spread":0.22404784176731662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1486935504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9906365,0.0027393852,0.0033943052,0.0004773112,0.000043381664,0.000042056014,0.0009094986,0.00021635856,0.0015412144],"genre_scores_gemma":[0.9889741,0.0014617947,0.004915732,0.00029878298,0.000034120447,0.000095223135,0.0013031935,0.00006082928,0.0028562488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996536,0.000052850326,0.00003696161,0.00006755844,0.00007847244,0.000110558714],"domain_scores_gemma":[0.99947006,0.000026225696,0.00028870103,0.00002972543,0.000043133386,0.00014216403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025520902,0.0005330363,0.00031592115,0.00077054277,0.00026260587,0.0007243932,0.00024254715,0.0006425342,0.001463565],"category_scores_gemma":[0.00022785399,0.00027205396,0.00038810069,0.00023228828,0.0005783629,0.00041778505,0.00043679425,0.0010326225,0.0006705716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002228628,0.00001685879,0.0002926787,0.0000307752,0.0000034411992,0.00011257768,0.0000118002845,0.000016836007,0.9986986,0.000041567317,0.000028686167,0.0005232908],"study_design_scores_gemma":[0.000029659162,0.00040822735,0.018647948,0.000032657703,0.000037641017,0.0015201952,0.00017460175,0.0007440312,0.97637296,0.00017309384,0.0018441365,0.000014878645],"about_ca_topic_score_codex":0.00034588788,"about_ca_topic_score_gemma":0.00044450024,"teacher_disagreement_score":0.001463565,"about_ca_system_score_codex":0.0006127671,"about_ca_system_score_gemma":0.00036814963,"threshold_uncertainty_score":0.0048961043},"labels":[],"label_agreement":null},{"id":"W1487322990","doi":"10.1016/j.immuni.2015.07.003","title":"Orphan Nuclear Receptor ERRα Controls Macrophage Metabolic Signaling and A20 Expression to Negatively Regulate TLR-Induced Inflammation","year":2015,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":135,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; National Research Foundation of Korea; Korea Research Institute of Bioscience and Biotechnology; Ministry of Education; Ministry of Science, ICT and Future Planning; Hanyang University","keywords":"Inflammation; Biology; Cell biology; Sirtuin; Nuclear receptor; Transcription factor; Receptor; Sirtuin 1; Regulator; Mitochondrial biogenesis; Signal transduction; Downregulation and upregulation; NAD+ kinase; Immunology; Function (biology); Biochemistry","score_opus":0.02388955111000435,"score_gpt":0.2522060438537986,"score_spread":0.22831649274379423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1487322990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97702867,0.0061654984,0.0075442735,0.00078976643,0.00029621326,0.00004110128,0.001065108,0.00026834113,0.0068009505],"genre_scores_gemma":[0.98571867,0.0021141972,0.0028053033,0.00027877078,0.000068067166,0.000034226843,0.0009173754,0.00010322697,0.007960112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994808,0.00010282653,0.00003450099,0.00009275527,0.000095345094,0.00019374864],"domain_scores_gemma":[0.9997521,0.000022914892,0.00008532082,0.000037959915,0.000041507643,0.00006017703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003827678,0.0005978348,0.00045204864,0.0005027602,0.00036995535,0.0006161509,0.00036977502,0.00045829258,0.0038843842],"category_scores_gemma":[0.00033293897,0.00034477675,0.00059731316,0.00020204755,0.00051866105,0.00049845985,0.00058931916,0.0008577409,0.0017114335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080861355,0.000034708653,0.0007393843,0.000054224776,0.000014473935,0.00016343885,0.000025337367,0.00008214907,0.9951925,0.00045653546,0.00019279965,0.0022358296],"study_design_scores_gemma":[0.00020050952,0.0005175743,0.035821628,0.000059904512,0.00008802967,0.0013040368,0.00045410762,0.0025821975,0.94031537,0.0010715632,0.017552689,0.000032367076],"about_ca_topic_score_codex":0.00044784704,"about_ca_topic_score_gemma":0.0008836691,"teacher_disagreement_score":0.0038843842,"about_ca_system_score_codex":0.0004267317,"about_ca_system_score_gemma":0.00031952604,"threshold_uncertainty_score":0.012994528},"labels":[],"label_agreement":null},{"id":"W1487730160","doi":"10.4049/jimmunol.179.8.5137","title":"<i>Mycobacterium bovis</i> Bacillus Calmette-Guerin Secreting Active Cathepsin S Stimulates Expression of Mature MHC Class II Molecules and Antigen Presentation in Human Macrophages","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Genentech; Michael Smith Health Research BC; British Columbia Lung Association","keywords":"MHC class II; Antigen presentation; Microbiology; Biology; MHC class I; Antigen processing; Mycobacterium bovis; Cathepsin S; Antigen; Phagosome; Secretion; T cell; Mycobacterium tuberculosis; Cathepsin L; Major histocompatibility complex; Cathepsin; Immunology; Immune system; Tuberculosis; Phagocytosis; Biochemistry; Medicine; Enzyme","score_opus":0.007039334085842811,"score_gpt":0.2508256958215871,"score_spread":0.24378636173574428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1487730160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970578,0.0013291711,0.00041957502,0.000075704644,0.000022171493,0.000020523003,0.00008435505,0.000047839392,0.00094282243],"genre_scores_gemma":[0.9974892,0.00044850036,0.0006460854,0.0000569049,0.000018126842,0.000018499193,0.00028725478,0.000010377818,0.0010251609],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989736,0.000025415817,0.000009568654,0.000013870598,0.0000182697,0.000035602756],"domain_scores_gemma":[0.9999478,0.000009685056,0.000014091538,0.0000082782235,0.000006927574,0.000013273248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111314075,0.00026160653,0.00024438865,0.00009715079,0.0000798299,0.00021948306,0.000077907505,0.00019668404,0.00072223257],"category_scores_gemma":[0.00010657958,0.00008594687,0.00018683741,0.00008414138,0.0001532704,0.00007927906,0.00016425231,0.00031594886,0.00038057705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002057473,0.000045105575,0.0002553434,0.000028758532,0.0000030994293,0.000039153212,0.000010099199,0.000024097475,0.998309,0.000016696753,0.000049056045,0.001013763],"study_design_scores_gemma":[0.000060449107,0.0018001364,0.008750515,0.000011342029,0.000017875504,0.00059154176,0.000032938813,0.0005749539,0.9851371,0.000033919157,0.002985356,0.000003883475],"about_ca_topic_score_codex":0.0005205609,"about_ca_topic_score_gemma":0.00055759057,"teacher_disagreement_score":0.00072223257,"about_ca_system_score_codex":0.00018636059,"about_ca_system_score_gemma":0.00013778162,"threshold_uncertainty_score":0.0024160743},"labels":[],"label_agreement":null},{"id":"W149187243","doi":"10.1096/fasebj.21.6.a849-c","title":"An essential role for endothelial TLR4 in leukocyte recruitment","year":2007,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"TLR4; Endothelium; Immunology; Biology; Innate immune system; Population; Transgene; Genetically modified mouse; Immune system; Cell biology; Medicine; Endocrinology; Gene; Biochemistry","score_opus":0.023729262882591896,"score_gpt":0.2930377915486155,"score_spread":0.26930852866602356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W149187243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96770704,0.006992588,0.017893154,0.0006986896,0.000109817025,0.000051467356,0.00045190015,0.00019931584,0.005895975],"genre_scores_gemma":[0.9855929,0.0018604662,0.0069748033,0.00014303548,0.00003792319,0.00006138342,0.00043032295,0.000015249581,0.004883814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997032,0.00008981455,0.00002335105,0.00004093752,0.000055322267,0.00008728184],"domain_scores_gemma":[0.99975747,0.00004602799,0.000057146513,0.000035363188,0.000055164157,0.000048882426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037848196,0.00025085532,0.00019445737,0.00028412463,0.00019045292,0.00045755226,0.00030137252,0.0004563283,0.001948252],"category_scores_gemma":[0.00028531248,0.0001661658,0.0002506485,0.00010245508,0.00022053381,0.00031638413,0.00049602485,0.0006247804,0.0006296592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035433666,0.00004971562,0.0013218835,0.00009039096,0.000011295396,0.00025146347,0.000014811992,0.00014684121,0.9904178,0.00092914724,0.00014097911,0.006271233],"study_design_scores_gemma":[0.00009954183,0.0006064185,0.0250473,0.000044847464,0.000057161575,0.0015508009,0.000100847355,0.0031503863,0.9544669,0.00095309224,0.013903629,0.000019052994],"about_ca_topic_score_codex":0.00029492172,"about_ca_topic_score_gemma":0.00031373216,"teacher_disagreement_score":0.001948252,"about_ca_system_score_codex":0.00028521023,"about_ca_system_score_gemma":0.00031950502,"threshold_uncertainty_score":0.0065175295},"labels":[],"label_agreement":null},{"id":"W1492075964","doi":"10.1096/fasebj.28.1_supplement.1095.18","title":"The significance of IL‐10 stimulation in cardiac innate responses (1095.18)","year":2014,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"TLR2; TLR4; Receptor; Downregulation and upregulation; Stimulation; Signal transduction; Innate immune system; p38 mitogen-activated protein kinases; Endocrinology; Knockout mouse; Toll-like receptor; Tumor necrosis factor alpha; Internal medicine; Biology; Cell biology; Chemistry; Immunology; Medicine; MAPK/ERK pathway; Biochemistry; Gene","score_opus":0.015429012610695106,"score_gpt":0.2528074185275402,"score_spread":0.2373784059168451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1492075964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9541199,0.022562684,0.004497544,0.0009321567,0.00065707497,0.00011877291,0.0013255064,0.0001316812,0.015654696],"genre_scores_gemma":[0.98161536,0.005151403,0.0021718247,0.00047318861,0.0001396658,0.00010808935,0.0010705746,0.000018130368,0.009251605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981135,0.000043712353,0.000013526457,0.000031532123,0.00003306524,0.00006697093],"domain_scores_gemma":[0.999863,0.000017126693,0.00003523851,0.000010276559,0.0000151148015,0.00005912218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022619507,0.0005768487,0.00016169158,0.00022469126,0.00012806605,0.00039841072,0.00014137386,0.00039195453,0.004040433],"category_scores_gemma":[0.000110370114,0.00010682663,0.0002631299,0.00007666889,0.00019021935,0.00019243216,0.00022497232,0.0007660146,0.0011529508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005002438,0.00006162655,0.0010847286,0.00014725933,0.0000068193262,0.00022358805,0.000015003785,0.000032750373,0.99181706,0.0002481857,0.00020254723,0.0056602266],"study_design_scores_gemma":[0.00011520229,0.002615096,0.07146485,0.00016104562,0.000064238775,0.002214891,0.0001377135,0.0008538708,0.8997139,0.00073848566,0.02190182,0.000018935598],"about_ca_topic_score_codex":0.0001664903,"about_ca_topic_score_gemma":0.00027249032,"teacher_disagreement_score":0.004040433,"about_ca_system_score_codex":0.00026695977,"about_ca_system_score_gemma":0.00017605854,"threshold_uncertainty_score":0.013516545},"labels":[],"label_agreement":null},{"id":"W1492105728","doi":"10.4049/jimmunol.173.11.7070","title":"TLR4 Contributes to Disease-Inducing Mechanisms Resulting in Central Nervous System Autoimmune Disease","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":207,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Cancer Foundation; University of Calgary","funders":"Fondation pour la Recherche Médicale; Multiple Sclerosis Society; Canada Research Chairs; Multiple Sclerosis Society of Canada; Canadian Association of Gastroenterology","keywords":"Experimental autoimmune encephalomyelitis; Immunology; Immune system; TLR4; Autoimmunity; Innate immune system; Biology; Autoimmune disease; Multiple sclerosis; Blood–brain barrier; Central nervous system; Neuroscience; Antibody","score_opus":0.007480739765957314,"score_gpt":0.21754916377503652,"score_spread":0.2100684240090792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1492105728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98966753,0.004588329,0.0024867533,0.0004446944,0.00004052417,0.000023452762,0.0000905513,0.000081386315,0.0025769062],"genre_scores_gemma":[0.993614,0.0024741886,0.0018197129,0.00013460682,0.000071135495,0.000024993638,0.00014169505,0.000013093724,0.0017066058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971706,0.00010231316,0.000032374628,0.000030608422,0.000040768336,0.000076862205],"domain_scores_gemma":[0.99974555,0.000034424043,0.00009980992,0.00002916645,0.000033015545,0.000058071935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038699972,0.00068666856,0.00033306214,0.0005373002,0.00027651698,0.00041020534,0.00028975308,0.00055226806,0.0019273805],"category_scores_gemma":[0.00030405534,0.0001944544,0.00034565682,0.00014838898,0.00040928702,0.00036882304,0.0006148782,0.0007514771,0.00054495945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013697202,0.00022797177,0.009444551,0.00032586887,0.000065598855,0.0022405963,0.00007744028,0.0002858766,0.9736264,0.000792522,0.00038178964,0.0111617595],"study_design_scores_gemma":[0.0004311006,0.0027614986,0.18534566,0.00021733102,0.00083331886,0.027033279,0.00052362145,0.0069174115,0.74768287,0.007001786,0.021195559,0.00005657493],"about_ca_topic_score_codex":0.00020827712,"about_ca_topic_score_gemma":0.00024399773,"teacher_disagreement_score":0.0019273805,"about_ca_system_score_codex":0.00032101487,"about_ca_system_score_gemma":0.00025280204,"threshold_uncertainty_score":0.0064477324},"labels":[],"label_agreement":null},{"id":"W1492668945","doi":"10.1096/fasebj.29.1_supplement.46.7","title":"Differential Role of Toll‐like Receptors in Elicitation of Cardiac Innate Response to IL‐10","year":2015,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"TLR2; TLR4; Receptor; Toll-like receptor; Cytokine; Signal transduction; Cell biology; Tumor necrosis factor alpha; Reperfusion injury; Medicine; Chemistry; Biology; Innate immune system; Immunology; Ischemia; Internal medicine","score_opus":0.011957341688118609,"score_gpt":0.2399698052330004,"score_spread":0.2280124635448818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1492668945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99565023,0.0015719496,0.0013903106,0.000073133015,0.000033331846,0.000023825467,0.00015305154,0.000020998186,0.001083217],"genre_scores_gemma":[0.9955923,0.00094083435,0.0016412684,0.00011161231,0.000026656526,0.00006211408,0.00023317974,0.00001016119,0.0013817353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996848,0.00006843599,0.000036343168,0.00004223487,0.000044225435,0.00012395075],"domain_scores_gemma":[0.99979514,0.000036883564,0.000038257163,0.000021611897,0.00002455176,0.000083586594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032566334,0.00032831184,0.00024749892,0.00029681358,0.00009258193,0.0003668986,0.00013761185,0.00034807908,0.0010590764],"category_scores_gemma":[0.00025380333,0.00018285432,0.00031882283,0.00009757657,0.00015770867,0.00031168733,0.00022163564,0.00051459746,0.00036981096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002737935,0.000022414662,0.0003868676,0.000030238896,0.0000029724738,0.000048495294,0.000014684636,0.000016880553,0.9985688,0.000039341285,0.000010426381,0.00058504246],"study_design_scores_gemma":[0.00008705813,0.0012496168,0.043960873,0.000026586245,0.00005432487,0.0007509164,0.00017696658,0.0012413848,0.9506205,0.0001942434,0.0016215295,0.00001606367],"about_ca_topic_score_codex":0.00009447361,"about_ca_topic_score_gemma":0.0001096782,"teacher_disagreement_score":0.0010590764,"about_ca_system_score_codex":0.00016650141,"about_ca_system_score_gemma":0.00012585969,"threshold_uncertainty_score":0.0035430193},"labels":[],"label_agreement":null},{"id":"W1493515173","doi":"10.4049/jimmunol.1101912","title":"IL-27 Enhances LPS-Induced Proinflammatory Cytokine Production via Upregulation of TLR4 Expression and Signaling in Human Monocytes","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Proinflammatory cytokine; TLR4; CD14; Cell biology; Priming (agriculture); Downregulation and upregulation; Innate immune system; Lipopolysaccharide; TLR2; Cytokine; Signal transduction; Biology; Inflammation; Immunology; Chemistry; Immune system; Biochemistry","score_opus":0.02005527351507492,"score_gpt":0.23672380171877044,"score_spread":0.21666852820369553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1493515173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99312055,0.002003689,0.0025740955,0.00016247945,0.000041396255,0.000053776974,0.0004397627,0.00004095067,0.0015633493],"genre_scores_gemma":[0.9935068,0.0016067012,0.0022978042,0.00014671065,0.00003799211,0.00009419168,0.0005615159,0.000010539057,0.0017377477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998227,0.00005331369,0.000013961208,0.000019543033,0.00003157816,0.00005890891],"domain_scores_gemma":[0.9999144,0.000016984499,0.00001574496,0.000011506917,0.000016696942,0.000024653922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016830671,0.00028058927,0.00024706885,0.00028113526,0.0001596674,0.00027012403,0.00007949701,0.00015101903,0.001772325],"category_scores_gemma":[0.00014951415,0.00014635645,0.00027735345,0.00016101587,0.00015313251,0.0000807114,0.00023944955,0.00047002127,0.00060305203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010991408,0.00010249943,0.0007824066,0.00009116104,0.000008264121,0.00026618876,0.000042638767,0.000097267715,0.99503076,0.00006862572,0.00012734877,0.002283741],"study_design_scores_gemma":[0.00015363656,0.0013806373,0.024270859,0.000027450638,0.000057500747,0.00070121064,0.00015188054,0.0013572954,0.96648574,0.00019798889,0.0052031833,0.00001268226],"about_ca_topic_score_codex":0.00045522346,"about_ca_topic_score_gemma":0.0005182054,"teacher_disagreement_score":0.001772325,"about_ca_system_score_codex":0.00022310301,"about_ca_system_score_gemma":0.00028411648,"threshold_uncertainty_score":0.005928993},"labels":[],"label_agreement":null},{"id":"W1494437758","doi":"10.4161/23723556.2014.981443","title":"The other face of TLR3: A driving force of breast cancer stem cells","year":2015,"lang":"en","type":"article","venue":"Molecular & Cellular Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Cancer research; Breast cancer; Cancer stem cell; Stem cell; TLR3; Cancer; Wnt signaling pathway; Biology; Cell biology; Signal transduction; Medicine; Chemistry; Immunology; Internal medicine; Immune system; Innate immune system","score_opus":0.011737603761048113,"score_gpt":0.24740811835809107,"score_spread":0.23567051459704297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1494437758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89221084,0.032202125,0.026930794,0.01908443,0.0014334236,0.0000650291,0.0011912683,0.00052844116,0.026353706],"genre_scores_gemma":[0.98560774,0.004364601,0.0025592754,0.0015171008,0.00018673121,0.000029730247,0.0002413142,0.000032103628,0.005461415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997603,0.00003387314,0.000008312378,0.000037360514,0.00007024337,0.00008994963],"domain_scores_gemma":[0.99985623,0.000020126436,0.00003523239,0.000011768622,0.00003093607,0.000045551773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021987224,0.000294159,0.00030298755,0.00025937925,0.00035305182,0.00081076584,0.00022986587,0.00065256644,0.005482981],"category_scores_gemma":[0.00024994143,0.00011387649,0.0004038448,0.00016155382,0.0004810468,0.0005915978,0.00058789755,0.0012200663,0.001260601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034549725,0.000037074413,0.00152492,0.0002858763,0.000020915126,0.00040874624,0.00007390142,0.00024127026,0.9777148,0.004228382,0.0014654906,0.013653317],"study_design_scores_gemma":[0.00006295359,0.0005818917,0.010536246,0.00009175502,0.00009273377,0.0023244435,0.0007659527,0.0032564604,0.93166465,0.006178238,0.04440197,0.000042754076],"about_ca_topic_score_codex":0.0003037074,"about_ca_topic_score_gemma":0.00042404866,"teacher_disagreement_score":0.005482981,"about_ca_system_score_codex":0.00039885892,"about_ca_system_score_gemma":0.00035225134,"threshold_uncertainty_score":0.018342376},"labels":[],"label_agreement":null},{"id":"W1497652734","doi":"10.1002/eji.201545564","title":"Soluble flagellin coimmunization attenuates Th1 priming to Salmonella and clearance by modulating dendritic cell activation and cytokine production","year":2015,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council","keywords":"TLR5; Flagellin; Priming (agriculture); Biology; Cell biology; Antigen; In vivo; T cell; Cytokine; Immunology; Immune system; Innate immune system; Toll-like receptor; Biochemistry; Receptor","score_opus":0.014925473531483447,"score_gpt":0.21211816424766733,"score_spread":0.1971926907161839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1497652734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986344,0.0004831408,0.00037429272,0.00005043573,0.000026800473,0.000014457605,0.00004706344,0.00003669421,0.00033274095],"genre_scores_gemma":[0.9973246,0.00040110576,0.0007016889,0.00005012968,0.000029524688,0.0000223002,0.00013634266,0.000011546387,0.001322794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997818,0.000036822654,0.000017299264,0.000027135637,0.00004127664,0.0000957691],"domain_scores_gemma":[0.9997943,0.000027994643,0.00006361171,0.000018213002,0.000014964003,0.00008085183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018522522,0.00041563224,0.00037671044,0.00022011912,0.000097505974,0.00023846077,0.0001823374,0.00037584666,0.0008924935],"category_scores_gemma":[0.00017527949,0.00016307052,0.00017776531,0.00010573948,0.00030332137,0.00020475412,0.00014212687,0.0009113659,0.00025333432],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096224516,0.00028032187,0.00020472695,0.000037436643,0.0000045323814,0.000034078294,0.000013604584,0.000057161426,0.996378,0.000035155193,0.00004270057,0.0019500254],"study_design_scores_gemma":[0.00012177878,0.006200237,0.0071173916,0.000009567112,0.000027348548,0.00023512414,0.000029798382,0.00091869157,0.98416543,0.000042682135,0.0011265468,0.0000053994263],"about_ca_topic_score_codex":0.00040500815,"about_ca_topic_score_gemma":0.00062189647,"teacher_disagreement_score":0.0008924935,"about_ca_system_score_codex":0.00026281827,"about_ca_system_score_gemma":0.00031932566,"threshold_uncertainty_score":0.0029856563},"labels":[],"label_agreement":null},{"id":"W1498007334","doi":"10.4049/jimmunol.164.6.3255","title":"CD14 Employs Hydrophilic Regions to “Capture” Lipopolysaccharides","year":2000,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"","keywords":"CD14; Epitope; Innate immune system; Lipid A; Serine; Lipopolysaccharide; Monoclonal antibody; Biology; Biochemistry; Chemistry; Cell biology; Microbiology; Receptor; Antigen; Phosphorylation; Antibody; Genetics; Immunology","score_opus":0.009909113761367902,"score_gpt":0.2307747331120445,"score_spread":0.22086561935067658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1498007334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978296,0.00015463206,0.0015614909,0.000037513575,0.0000067806786,0.000011428737,0.000014947079,0.000009575686,0.00037392153],"genre_scores_gemma":[0.9967758,0.0001249686,0.0024972884,0.000052401,0.000005003007,0.0000074790405,0.00007470261,0.000004295515,0.0004580701],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982387,0.000042780423,0.000011608465,0.000027673694,0.000044523014,0.00004953755],"domain_scores_gemma":[0.9998534,0.000027785527,0.000040091218,0.000023980165,0.000026044301,0.000028714487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017833726,0.00031785373,0.0001436715,0.00012503336,0.00017041215,0.00019191086,0.00019661036,0.00028575075,0.00064936554],"category_scores_gemma":[0.00020523436,0.00010663672,0.0002047016,0.00008252391,0.00028500365,0.00017565092,0.00025061864,0.00028566713,0.00028958655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052698815,0.000013203144,0.00056370033,0.000009660962,0.0000029200312,0.00005245473,0.0000068650425,0.000051615894,0.99838805,0.00009734315,0.000011081926,0.00075034215],"study_design_scores_gemma":[0.000017785622,0.00028584318,0.0051599955,0.000004198134,0.000014815559,0.0007156244,0.000027216634,0.0010032777,0.9912555,0.00007899126,0.0014328419,0.00000382025],"about_ca_topic_score_codex":0.00024207997,"about_ca_topic_score_gemma":0.00029085466,"teacher_disagreement_score":0.00064936554,"about_ca_system_score_codex":0.00023643386,"about_ca_system_score_gemma":0.00014973471,"threshold_uncertainty_score":0.0021723509},"labels":[],"label_agreement":null},{"id":"W1499659307","doi":"10.1038/82741","title":"Caspase inhibitors improve survival in sepsis: a critical role of the lymphocyte","year":2000,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":527,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"National Institute of General Medical Sciences","keywords":"Sepsis; Lymphocyte; Immunology; Apoptosis; Biology; Medicine; Cancer research; Genetics","score_opus":0.0025134630119720844,"score_gpt":0.22448418391898015,"score_spread":0.22197072090700806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1499659307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72452736,0.2290794,0.007765626,0.023183467,0.0035252527,0.00013479784,0.0006328766,0.00043630748,0.010714959],"genre_scores_gemma":[0.925472,0.06058439,0.0028521644,0.0034707314,0.0017998465,0.000120730765,0.00028312986,0.00008270542,0.005334227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971634,0.00009988613,0.000025625275,0.000027614697,0.000044194494,0.00008625722],"domain_scores_gemma":[0.99963224,0.00007773265,0.00009732978,0.000054993583,0.00006034175,0.00007738168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065003795,0.0006973021,0.000896554,0.00022375725,0.00018099789,0.00081823487,0.00033828276,0.0007691654,0.0037478178],"category_scores_gemma":[0.0007477322,0.00015152013,0.00046138637,0.00016828586,0.0005230107,0.0010070129,0.00044646283,0.0028529451,0.0006733859],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03875679,0.0016270468,0.0027691612,0.0019696518,0.0005162308,0.00057207525,0.00016386784,0.0013314333,0.4724242,0.005573441,0.017423976,0.45687202],"study_design_scores_gemma":[0.017674815,0.054783426,0.06073928,0.0016066028,0.0022062503,0.0048473743,0.0009101578,0.004715532,0.6220622,0.02259225,0.20765732,0.00020474664],"about_ca_topic_score_codex":0.00009426321,"about_ca_topic_score_gemma":0.00021622446,"teacher_disagreement_score":0.0037478178,"about_ca_system_score_codex":0.0002571057,"about_ca_system_score_gemma":0.00045378786,"threshold_uncertainty_score":0.012537718},"labels":[],"label_agreement":null},{"id":"W1501882952","doi":"10.1111/j.1365-2249.2010.04249.x","title":"Forward genetic dissection of innate response to infection in inbred mouse strains: selected success stories","year":2010,"lang":"en","type":"review","venue":"Clinical & Experimental Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Innate immune system; Biology; Effector; Host response; Immunology; Gene; Pathogen; Inflammatory response; Immune system; Genetics; Inflammation","score_opus":0.039433804620683126,"score_gpt":0.3985372066924559,"score_spread":0.35910340207177277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1501882952","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044476005,0.9950936,0.0014207666,0.00080162653,0.0004610839,0.00000778788,0.0000296477,0.0000298072,0.0017108896],"genre_scores_gemma":[0.0011699506,0.99553514,0.00134549,0.00052092655,0.00036712646,0.000013019072,0.00004648151,0.000008488436,0.0009933154],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.99956745,0.000069126756,0.000053646036,0.000080010155,0.00020085681,0.00002887216],"domain_scores_gemma":[0.9992568,0.00029624024,0.000075961165,0.000042534266,0.00021273362,0.000115728675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023008971,0.0015958992,0.0013742076,0.001964839,0.0002625931,0.0010548146,0.001493416,0.0015633219,0.0015032379],"category_scores_gemma":[0.001382563,0.00043626598,0.00043169488,0.0013344567,0.0016094017,0.0017692567,0.0008900711,0.003415698,0.002198852],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023486365,0.00018555748,0.00048578216,0.0073649813,0.00013896181,0.00075890945,0.000112202935,0.0006894007,0.027221128,0.020236608,0.050715443,0.89185625],"study_design_scores_gemma":[0.00006208976,0.00015941965,0.0013204253,0.0016916479,0.00009736832,0.0021353886,0.000053637552,0.00015367496,0.0072298567,0.005951288,0.98109645,0.00004881836],"about_ca_topic_score_codex":0.00088210235,"about_ca_topic_score_gemma":0.001236004,"teacher_disagreement_score":0.0023008971,"about_ca_system_score_codex":0.0011023502,"about_ca_system_score_gemma":0.0009376831,"threshold_uncertainty_score":0.012168467},"labels":[],"label_agreement":null},{"id":"W1507191114","doi":"10.4049/jimmunol.168.7.3570","title":"Modulation of Leukotriene B4 Receptor-1 Expression by Dexamethasone: Potential Mechanism for Enhanced Neutrophil Survival","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Leukotriene B4; Dexamethasone; Chemotaxis; Receptor; Endocrinology; Internal medicine; Apoptosis; Leukotriene; Antagonist; Glucocorticoid receptor; Arachidonate 5-lipoxygenase; Messenger RNA; Chemistry; Inflammation; Biology; Medicine; Enzyme; Biochemistry; Gene","score_opus":0.012295123824055723,"score_gpt":0.2226349720070287,"score_spread":0.21033984818297297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1507191114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9037479,0.07818985,0.0123337805,0.0014893073,0.00037964748,0.00014194305,0.00079483207,0.00024804368,0.0026746728],"genre_scores_gemma":[0.9852629,0.009556285,0.0021995394,0.00025078832,0.000059527927,0.000083388484,0.0003072289,0.000009942338,0.0022703656],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997924,0.00006888688,0.00001956228,0.00003476694,0.000027945054,0.000056510944],"domain_scores_gemma":[0.99986494,0.000025680316,0.000041654974,0.000019560302,0.000018230487,0.000030017747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021109045,0.00040131115,0.000487742,0.00021925948,0.00015329481,0.00040917157,0.00037906604,0.0005438212,0.0015481153],"category_scores_gemma":[0.00024155133,0.00010407708,0.00032997588,0.00014416059,0.000236259,0.00031989333,0.00023573157,0.00045633115,0.00032807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005362138,0.000039704508,0.00056661345,0.00021263573,0.000020345948,0.00026893622,0.000040045536,0.00006052713,0.9921051,0.00045019772,0.00012240431,0.0055772946],"study_design_scores_gemma":[0.00012419587,0.0010302697,0.0130877085,0.000053879197,0.00007618399,0.0009136488,0.00017730464,0.00080412906,0.9734572,0.0005001658,0.009756542,0.00001870694],"about_ca_topic_score_codex":0.00039267598,"about_ca_topic_score_gemma":0.0006400333,"teacher_disagreement_score":0.0015481153,"about_ca_system_score_codex":0.00047589198,"about_ca_system_score_gemma":0.00019501738,"threshold_uncertainty_score":0.0051789284},"labels":[],"label_agreement":null},{"id":"W1507795153","doi":"10.1155/2012/804173","title":"Interleukin-4 receptor −3223C→T Polymorphism is Associated with Increased Gastric Adenocarcinoma Risk","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Genotype; Gastroenterology; Internal medicine; Adenocarcinoma; Stomach cancer; Allele; Cancer; Population; Allele frequency; Oncology; Medicine; Biology; Genetics; Gene","score_opus":0.007515528627661343,"score_gpt":0.18452500848074183,"score_spread":0.1770094798530805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1507795153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983835,0.0008064932,0.000179391,0.000075075135,0.000020362384,0.000005246722,0.00010718507,0.000009819636,0.00041291703],"genre_scores_gemma":[0.9992593,0.00020612884,0.00017907999,0.000027770977,0.000020861402,0.0000057610314,0.000101326004,0.0000038851936,0.00019584144],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997683,0.00007547991,0.000026287216,0.000067669505,0.000035666195,0.000026590538],"domain_scores_gemma":[0.9990747,0.00018835795,0.00047827006,0.000074783275,0.00007656503,0.00010725713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034761528,0.0003137277,0.00039022294,0.00041481448,0.00025431515,0.00037034528,0.0002597106,0.00043578548,0.0027624813],"category_scores_gemma":[0.0014515932,0.00019843492,0.000548686,0.0006167188,0.00026262715,0.00008658779,0.00020484356,0.00044891148,0.00033755985],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006731861,0.000035039666,0.99233013,0.00003850726,0.00016484356,0.0006657812,0.00005335482,0.0000864623,0.0038566943,0.000030890416,0.00013474685,0.0019303417],"study_design_scores_gemma":[0.000037453483,0.00012132453,0.99630725,0.000015409449,0.00020176035,0.0021439216,0.000054740034,0.00034555004,0.00035810744,0.000076479024,0.00033297288,0.0000049558007],"about_ca_topic_score_codex":0.0011365311,"about_ca_topic_score_gemma":0.0007689969,"teacher_disagreement_score":0.0027624813,"about_ca_system_score_codex":0.00011459762,"about_ca_system_score_gemma":0.00016599224,"threshold_uncertainty_score":0.009241343},"labels":[],"label_agreement":null},{"id":"W1515961553","doi":"10.3390/toxins7051821","title":"Superantigens Modulate Bacterial Density during Staphylococcus aureus Nasal Colonization","year":2015,"lang":"en","type":"article","venue":"Toxins","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Superantigen; Staphylococcus aureus; Microbiology; Biology; Enterotoxin; Colonization; Staphylococcal infections; Immune system; Pathogen; Immunology; T cell; Bacteria; Gene; Escherichia coli; Genetics","score_opus":0.015020919522354332,"score_gpt":0.22513867705258364,"score_spread":0.21011775753022932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1515961553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989158,0.0003132032,0.00030504088,0.000018804703,0.0000061957126,0.000011759011,0.000023352333,0.000009900116,0.0003958857],"genre_scores_gemma":[0.99897826,0.00015980027,0.00038792365,0.000025911751,0.0000060965544,0.0000122494675,0.000044642733,0.0000052829505,0.00037987126],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997615,0.00005162168,0.000016457368,0.00003152511,0.00007104564,0.000067901114],"domain_scores_gemma":[0.9996929,0.000055314995,0.000083319166,0.000015345966,0.000049554023,0.00010351177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014185662,0.0002212868,0.00024707027,0.00020719526,0.00010968447,0.00038370746,0.00009639226,0.00033302658,0.0005774956],"category_scores_gemma":[0.00028568975,0.0001534412,0.0001166701,0.000113179645,0.00021940588,0.00030169764,0.0002575898,0.00056649355,0.00017121495],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011020198,0.000019509042,0.00055155327,0.000007592653,0.0000010829415,0.000039774088,0.000026449408,0.000013992542,0.99881506,0.000012141117,0.00000664053,0.000396017],"study_design_scores_gemma":[0.00002223663,0.001511205,0.07800332,0.00001348325,0.000019908412,0.00037614067,0.00040438893,0.0016244575,0.91716635,0.00010697315,0.0007383658,0.000013172644],"about_ca_topic_score_codex":0.0002850887,"about_ca_topic_score_gemma":0.00046354003,"teacher_disagreement_score":0.0005774956,"about_ca_system_score_codex":0.00024383678,"about_ca_system_score_gemma":0.00015093727,"threshold_uncertainty_score":0.0019319654},"labels":[],"label_agreement":null},{"id":"W1516895518","doi":"10.1002/9780470923733.ch7","title":"Interferon, Cytokine Induction, and other Potential<i>In Vivo</i>Toxicities","year":2010,"lang":"en","type":"other","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arbutus Biopharma (Canada)","funders":"","keywords":"In vivo; Cytokine; Interferon; Interferon γ; Immunology; Medicine; Biology; Interferon gamma; Biotechnology","score_opus":0.0063729104687867836,"score_gpt":0.21382161040174633,"score_spread":0.20744869993295953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1516895518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.841067,0.016601875,0.02031565,0.0014024227,0.0005320479,0.000446274,0.0022277362,0.00069775415,0.11670913],"genre_scores_gemma":[0.9491942,0.0058174133,0.0045110844,0.00037010433,0.00019470531,0.00023073389,0.0013977198,0.00014961368,0.038134452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999629,0.00011842775,0.000020793232,0.000032024793,0.00009215065,0.00010765132],"domain_scores_gemma":[0.99978405,0.000048403406,0.000044162854,0.00005956907,0.000023560979,0.000040125196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068405987,0.0010193367,0.00054655405,0.00062210986,0.0003034501,0.00056877726,0.00044901745,0.00056240184,0.006631369],"category_scores_gemma":[0.00028368935,0.00012891796,0.0005492124,0.0003006367,0.00029470076,0.0003749559,0.00032861248,0.0009540452,0.0011678399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029547454,0.0009692321,0.0018380973,0.00042647982,0.000048879996,0.00078247726,0.00005638547,0.0014726309,0.9317217,0.008595401,0.0025215978,0.04861243],"study_design_scores_gemma":[0.0001849207,0.0026278673,0.0056989496,0.00007586844,0.000091857044,0.0022895182,0.0000674869,0.0020025582,0.95715195,0.0017835615,0.028010335,0.000015114949],"about_ca_topic_score_codex":0.00023710955,"about_ca_topic_score_gemma":0.00046184793,"teacher_disagreement_score":0.006631369,"about_ca_system_score_codex":0.00042841872,"about_ca_system_score_gemma":0.0003288663,"threshold_uncertainty_score":0.022184134},"labels":[],"label_agreement":null},{"id":"W1521009884","doi":"10.4049/jimmunol.174.12.7823","title":"STAT-1 Mediates the Stimulatory Effect of IL-10 on CD14 Expression in Human Monocytic Cells","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"MAPK/ERK pathway; CD14; Cell biology; LY294002; PI3K/AKT/mTOR pathway; Phosphorylation; Proinflammatory cytokine; THP1 cell line; Protein kinase B; Chemistry; Biology; Signal transduction; Cancer research; Molecular biology; Cell culture; Immunology; Inflammation","score_opus":0.00724488019762277,"score_gpt":0.2481698516781561,"score_spread":0.24092497148053335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521009884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804309,0.0045746705,0.00617585,0.00046138643,0.00013950925,0.00006889342,0.001677956,0.00012420381,0.006346639],"genre_scores_gemma":[0.9864421,0.0025933986,0.0040124096,0.00014952426,0.00005616445,0.000048954535,0.002154612,0.000018560235,0.004524179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979395,0.000037139493,0.000015808448,0.00002102977,0.000058175803,0.000073855204],"domain_scores_gemma":[0.9998791,0.000024142833,0.00002238495,0.000017333485,0.000018130997,0.000038837403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015620457,0.0004047598,0.00023395017,0.00025613583,0.00024165155,0.00040534572,0.00011568027,0.00021353381,0.0042963596],"category_scores_gemma":[0.00015130443,0.00023551902,0.00033735475,0.00018463821,0.00020260082,0.00018329473,0.00023264378,0.0005991197,0.0021951152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032633613,0.000051111852,0.00029452448,0.00007335098,0.0000030533047,0.00008382691,0.000016844328,0.00006801289,0.99710554,0.00020887362,0.00013248798,0.0016360404],"study_design_scores_gemma":[0.00014234043,0.0004107178,0.019177899,0.000029057654,0.000023718789,0.00052268,0.00006140691,0.002847706,0.96999466,0.00034051973,0.0064408877,0.000008363673],"about_ca_topic_score_codex":0.0005496622,"about_ca_topic_score_gemma":0.0010196049,"teacher_disagreement_score":0.0042963596,"about_ca_system_score_codex":0.00035248228,"about_ca_system_score_gemma":0.00041517388,"threshold_uncertainty_score":0.014372766},"labels":[],"label_agreement":null},{"id":"W1523615188","doi":"10.1186/ar1381","title":"Regulation of innate and adaptive immunity and autoimmunity by Toll-like receptor 9","year":2004,"lang":"en","type":"article","venue":"Arthritis Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Arthritis Network; School of Medicine, University of California, San Diego; Menzies Institute for Medical Research; National Cancer Institute; Arthritis Society; University of North Carolina at Chapel Hill; Genentech; National Institutes of Health; Biogen; Lupus Research Institute; Pfizer; Natural Sciences and Engineering Research Council of Canada; Dutch Arthritis Association; Oesterreichische Nationalbank; Deutsche Forschungsgemeinschaft; Nuffield Foundation; Physiotherapy Foundation of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Lupus Research Alliance; Wellcome Trust; Newcastle University; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Austrian Science Fund; Arthritis Foundation","keywords":"TLR9; Immunology; Autoimmunity; Immune system; CpG Oligodeoxynucleotide; Acquired immune system; Disease; Medicine; Antigen; Immunotherapy; Cancer immunotherapy; Biology; Clinical trial; Bioinformatics; Internal medicine; Gene","score_opus":0.02473399126861568,"score_gpt":0.2878423621402361,"score_spread":0.2631083708716204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1523615188","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4019485,0.53832746,0.024005141,0.0072556646,0.0012355343,0.0003964852,0.0013710797,0.00023662923,0.025223559],"genre_scores_gemma":[0.8201297,0.1504104,0.017644875,0.0013982014,0.00037612257,0.00023041738,0.00062454614,0.000022052236,0.009163663],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989637,0.00066143204,0.00008380919,0.00007138017,0.00013203431,0.0000875209],"domain_scores_gemma":[0.9994418,0.00019241366,0.00019145764,0.000024441944,0.0001083715,0.000041451684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018308504,0.00033210302,0.00039434116,0.0010245909,0.00018192391,0.00063647475,0.00022616769,0.00029364091,0.0012466362],"category_scores_gemma":[0.00084071234,0.00014240143,0.00042335351,0.0003227505,0.00043645318,0.00042337715,0.00049581897,0.00050663133,0.00039973046],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020379978,0.00042370372,0.030917548,0.005931093,0.00027891056,0.0021192036,0.0005072385,0.001656897,0.35286328,0.012746431,0.00946608,0.5810516],"study_design_scores_gemma":[0.00077079824,0.0055502052,0.28659078,0.0030030287,0.0005817869,0.009333796,0.0016212492,0.0042047994,0.37617034,0.013969544,0.2980449,0.00015884993],"about_ca_topic_score_codex":0.0002811524,"about_ca_topic_score_gemma":0.00040040835,"teacher_disagreement_score":0.0018308504,"about_ca_system_score_codex":0.00035289014,"about_ca_system_score_gemma":0.00051621126,"threshold_uncertainty_score":0.009682536},"labels":[],"label_agreement":null},{"id":"W1524847211","doi":"10.1113/jphysiol.2007.132829","title":"Attenuated fever in rats during late pregnancy is linked to suppressed interleukin‐6 production after localized inflammation with turpentine","year":2007,"lang":"en","type":"article","venue":"The Journal of Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute","funders":"Canadian Institutes of Health Research; Health Canada; Canadian Bureau for International Education","keywords":"Endocrinology; Internal medicine; Prostaglandin E2; Inflammation; Pregnancy; Interleukin; Cytokine; Receptor antagonist; Thymic involution; Receptor; Interleukin 6; Medicine; Chemistry; Antagonist; Biology; Immunology; Immune system","score_opus":0.006458664983992609,"score_gpt":0.22629086830047954,"score_spread":0.21983220331648692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1524847211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972313,0.0007779053,0.0010961919,0.0001534748,0.00006143024,0.00003058588,0.0002442521,0.00008725604,0.00031758074],"genre_scores_gemma":[0.99278283,0.0014460966,0.0021279692,0.00015920168,0.000041298284,0.0001928653,0.00036973465,0.00003755839,0.002842442],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997799,0.000036364967,0.000019285846,0.00005659059,0.000032388954,0.000075409196],"domain_scores_gemma":[0.9994961,0.000038060338,0.00022576826,0.000056168,0.000025301068,0.0001586439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022226245,0.00069264433,0.00066893914,0.0005799043,0.00020414998,0.00033341223,0.0002466344,0.00039585942,0.0012846831],"category_scores_gemma":[0.00028916472,0.00037330436,0.00047052023,0.00017690397,0.0007533148,0.00033786215,0.00034195586,0.0015264308,0.00031432524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004117442,0.00025693362,0.00065341545,0.000063722,0.0000100607485,0.00020939617,0.00009797181,0.00006561264,0.99206513,0.0000961966,0.00004769745,0.0023163669],"study_design_scores_gemma":[0.00037833452,0.013883246,0.026720885,0.00004280382,0.00008691476,0.0006973904,0.0003438234,0.0011933629,0.95399785,0.00021321746,0.0023992844,0.00004291135],"about_ca_topic_score_codex":0.00069852115,"about_ca_topic_score_gemma":0.001116521,"teacher_disagreement_score":0.0012846831,"about_ca_system_score_codex":0.0003674659,"about_ca_system_score_gemma":0.0004352684,"threshold_uncertainty_score":0.0042977333},"labels":[],"label_agreement":null},{"id":"W1525588573","doi":"10.4049/jimmunol.179.6.4015","title":"Critical Negative Regulation of Type 1 T Cell Immunity and Immunopathology by Signaling Adaptor DAP12 during Intracellular Infection","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; McMaster University; McMaster University Medical Centre","funders":"National Institute of Allergy and Infectious Diseases; Colorado State University","keywords":"Biology; Immunopathology; Immunology; Intracellular; Immune system; Cytokine; T cell; Proinflammatory cytokine; Adoptive cell transfer; CD8; Innate immune system; Cell biology; Inflammation","score_opus":0.007668810529122281,"score_gpt":0.23228853837339128,"score_spread":0.224619727844269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1525588573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99714535,0.0010391382,0.001037349,0.00003523949,0.00001147331,0.000006529364,0.000073670584,0.000038021954,0.0006130934],"genre_scores_gemma":[0.998334,0.0003046403,0.00076664577,0.000018498235,0.00000731739,0.000015616955,0.000104515886,0.000009110757,0.000439686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999752,0.000051091352,0.000025015182,0.00004063131,0.00004482686,0.000086469336],"domain_scores_gemma":[0.99974245,0.00004752728,0.00008580584,0.00003173799,0.000024359344,0.00006814419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017099634,0.00039397593,0.00027456746,0.0001608371,0.00014625114,0.00037746207,0.0001946943,0.0003018366,0.00086482486],"category_scores_gemma":[0.00024040048,0.0001643004,0.00011363958,0.0000908866,0.00038250335,0.0003563586,0.0003166005,0.0005665405,0.00020996516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019660944,0.000011522068,0.0003505111,0.000023553644,0.0000012645161,0.00010979917,0.000009085815,0.00004629333,0.99834204,0.00008763083,0.000016819695,0.0008048274],"study_design_scores_gemma":[0.00003213593,0.00030748727,0.019062502,0.000011570268,0.000019025332,0.0012569347,0.00006357806,0.00086250383,0.97704595,0.0002326596,0.0010993191,0.0000063529787],"about_ca_topic_score_codex":0.00008371968,"about_ca_topic_score_gemma":0.00011343431,"teacher_disagreement_score":0.00086482486,"about_ca_system_score_codex":0.00026167012,"about_ca_system_score_gemma":0.00016493864,"threshold_uncertainty_score":0.0028931499},"labels":[],"label_agreement":null},{"id":"W1525997337","doi":"10.1111/j.1440-1843.2012.02244.x","title":"AA genotype of IL‐8 −251A/T is associated with low PaO<sub>2</sub>/FiO<sub>2</sub> in critically ill patients and with increased IL‐8 expression","year":2012,"lang":"en","type":"article","venue":"Respirology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Medicine; ARDS; Single-nucleotide polymorphism; Septic shock; Genotype; Mechanical ventilation; Cohort; Intensive care; Gastroenterology; SNP; Sepsis; Acute respiratory distress; Internal medicine; Anesthesia; Lung; Gene; Intensive care medicine; Genetics","score_opus":0.0048814771379294825,"score_gpt":0.19949813156632043,"score_spread":0.19461665442839093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1525997337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99962676,0.00007041963,0.00008127441,0.000032104595,0.000009194498,0.0000037229534,0.000059549246,0.0000029626035,0.000114024704],"genre_scores_gemma":[0.99956673,0.000026921858,0.000084677806,0.000032977143,0.000025984842,0.0000050971257,0.00011784097,0.000002665297,0.00013700919],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999699,0.00008429636,0.000037636295,0.000100246936,0.000038497812,0.000040333474],"domain_scores_gemma":[0.9989266,0.0002512757,0.00048812354,0.000065516375,0.00005548506,0.00021301284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038340891,0.00048202107,0.00038603286,0.00028087833,0.00037656268,0.0004503066,0.00020285384,0.0006143018,0.0025003168],"category_scores_gemma":[0.0010937195,0.00021800393,0.00031770108,0.0002664418,0.00037560632,0.00013480215,0.00019943016,0.00065938995,0.00033493157],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003752072,0.00023827274,0.9725739,0.000028179722,0.00014524955,0.0008281016,0.00009491602,0.0001412134,0.019798508,0.000048421985,0.00028900293,0.0020621407],"study_design_scores_gemma":[0.00011797942,0.0006775121,0.9952134,0.000010215883,0.00011745851,0.0021818206,0.00007654565,0.0005609674,0.00077302585,0.00006576182,0.00019672944,0.000008711017],"about_ca_topic_score_codex":0.00076217,"about_ca_topic_score_gemma":0.0008078218,"teacher_disagreement_score":0.0025003168,"about_ca_system_score_codex":0.000113698,"about_ca_system_score_gemma":0.00013873055,"threshold_uncertainty_score":0.008364439},"labels":[],"label_agreement":null},{"id":"W1527116370","doi":"10.1186/ar1347","title":"The nonsense allele oblivious reveals a sensor of di-acylglycerides acting in conjunction with TLR2 and TLR6","year":2004,"lang":"en","type":"article","venue":"Arthritis Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Arthritis Network; School of Medicine, University of California, San Diego; Menzies Institute for Medical Research; National Cancer Institute; Arthritis Society; University of North Carolina at Chapel Hill; Genentech; National Institutes of Health; Biogen; Lupus Research Institute; Pfizer; Natural Sciences and Engineering Research Council of Canada; Dutch Arthritis Association; Oesterreichische Nationalbank; Deutsche Forschungsgemeinschaft; Nuffield Foundation; Physiotherapy Foundation of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Lupus Research Alliance; Wellcome Trust; Newcastle University; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Austrian Science Fund; Arthritis Foundation","keywords":"Psychology","score_opus":0.024799723850251202,"score_gpt":0.29757744474379494,"score_spread":0.27277772089354374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1527116370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9409438,0.0025912547,0.025477236,0.0027713783,0.0019821436,0.00040774248,0.010840446,0.00095510215,0.014030867],"genre_scores_gemma":[0.97962224,0.00048400948,0.009934971,0.0009925727,0.0003042208,0.00011905984,0.002555102,0.00019190022,0.0057958737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928916,0.0001847259,0.00010036029,0.0001954098,0.00015540118,0.000074930984],"domain_scores_gemma":[0.99889636,0.00043799166,0.00039107638,0.000081273836,0.00007323241,0.00012006707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046757734,0.0009514907,0.0007171045,0.001116254,0.0006952351,0.0006784626,0.0006479214,0.0017413708,0.019900946],"category_scores_gemma":[0.0014000155,0.00014201444,0.0006630995,0.00079518795,0.0005960157,0.0003208634,0.00047908188,0.0009912518,0.0032190888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00780273,0.00090309983,0.121213995,0.00080886786,0.0006594221,0.07430855,0.0011303065,0.0010046114,0.69538456,0.008320602,0.015697574,0.072765745],"study_design_scores_gemma":[0.0008283495,0.004278779,0.36881763,0.0012101859,0.0015211476,0.19646376,0.0014725567,0.010138486,0.2591151,0.00995959,0.14572598,0.0004684218],"about_ca_topic_score_codex":0.0007841042,"about_ca_topic_score_gemma":0.0008641486,"teacher_disagreement_score":0.019900946,"about_ca_system_score_codex":0.00022355103,"about_ca_system_score_gemma":0.00022146771,"threshold_uncertainty_score":0.06657529},"labels":[],"label_agreement":null},{"id":"W1528669066","doi":"10.1111/j.1600-0897.2007.00558.x","title":"REVIEW ARTICLE: The Role of Toll‐Like Receptor Ligands/Agonists in Protection Against Genital HSV‐2 Infection","year":2007,"lang":"en","type":"review","venue":"American Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Innate immune system; Immunology; Herpes simplex virus; Toll-like receptor; Biology; Viral replication; Virology; Immune system; HSL and HSV; Virus","score_opus":0.0162361747718161,"score_gpt":0.29110289512168197,"score_spread":0.27486672034986587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1528669066","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027452025,0.9939301,0.00017180924,0.0005014534,0.00242474,0.0000117865775,0.0000310871,0.000015005639,0.0026395975],"genre_scores_gemma":[0.0009948751,0.99417394,0.00029402645,0.00047787125,0.0014737892,0.000011410977,0.000059004833,0.0000032667847,0.0025118508],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998605,0.000019245765,0.000019115272,0.000025871692,0.00006046822,0.000014836404],"domain_scores_gemma":[0.9997793,0.00006516702,0.00002740045,0.000004716498,0.00007788493,0.00004557464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003841624,0.0009273425,0.0011148534,0.001431402,0.00026371688,0.00077960116,0.0009244639,0.0011116512,0.0058231167],"category_scores_gemma":[0.0005333547,0.00018802192,0.00028535957,0.0015280509,0.00034332633,0.0013902156,0.00040579904,0.0014414137,0.005632636],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015986655,0.00009392971,0.00017911293,0.0116914045,0.000055252676,0.0003703201,0.00005495796,0.00024158244,0.003551689,0.0014539749,0.11488681,0.8672611],"study_design_scores_gemma":[0.000025350882,0.00012765602,0.00079134305,0.0015081075,0.00004886226,0.0018216857,0.00004199039,0.000043541222,0.00067307334,0.0005221278,0.99438345,0.0000128048805],"about_ca_topic_score_codex":0.00054609665,"about_ca_topic_score_gemma":0.0007794882,"teacher_disagreement_score":0.0058231167,"about_ca_system_score_codex":0.00042675246,"about_ca_system_score_gemma":0.0005723204,"threshold_uncertainty_score":0.019480228},"labels":[],"label_agreement":null},{"id":"W1530840473","doi":"10.17533/udea.rccp.324820","title":"Intestinal expression of pro-infammatory cytokines induced by oral intake of lipopolysaccharide (LPS) from E. coli in weaned pigs","year":2013,"lang":"en","type":"article","venue":"Revista Colombiana de Ciencias Pecuarias","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Lipopolysaccharide; Biology; Microbiology; Immunology","score_opus":0.01623270353752458,"score_gpt":0.24270555723572249,"score_spread":0.22647285369819792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1530840473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988569,0.00032657775,0.00020370925,0.000030452893,0.000019421645,0.000016276135,0.0002482755,0.000008259089,0.00029014228],"genre_scores_gemma":[0.99224335,0.00073512463,0.0009494902,0.00018592693,0.000021822938,0.000108163185,0.0009016982,0.000019752173,0.004834754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983346,0.000015778496,0.00001007173,0.00006397602,0.000026308844,0.00005026797],"domain_scores_gemma":[0.99965525,0.000067959976,0.00011121498,0.000018629897,0.000043745975,0.00010318656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018867257,0.00032869988,0.0004292234,0.00029329202,0.00016641966,0.00040398995,0.00014551792,0.0003919549,0.0013614778],"category_scores_gemma":[0.00021815157,0.00033599976,0.0002872224,0.00013453593,0.00036686417,0.00037409275,0.00014785919,0.0010426978,0.0002865359],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023847215,0.0003201402,0.0040500714,0.00008719455,0.000013320526,0.0001953355,0.000091847665,0.000026705498,0.9914665,0.00001567549,0.000036839952,0.0013115326],"study_design_scores_gemma":[0.00020412587,0.018443918,0.50266045,0.000093121474,0.0001567156,0.0007279016,0.0013287038,0.0004657073,0.47320452,0.00010249441,0.002566474,0.00004587183],"about_ca_topic_score_codex":0.0005700103,"about_ca_topic_score_gemma":0.0011131039,"teacher_disagreement_score":0.0013614778,"about_ca_system_score_codex":0.00034076412,"about_ca_system_score_gemma":0.00023648459,"threshold_uncertainty_score":0.0045546293},"labels":[],"label_agreement":null},{"id":"W1531846249","doi":"10.1159/000315914","title":"Endotoxin in the Pathogenesis of Sepsis","year":2010,"lang":"en","type":"review","venue":"Contributions to nephrology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Sepsis; Host response; Medicine; Immunology; Disease; Population; Innate immune system; Immune system; Pathogenesis; Intensive care medicine; Internal medicine","score_opus":0.01765592978184533,"score_gpt":0.31800125189239814,"score_spread":0.3003453221105528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1531846249","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006938956,0.99863166,0.000063693,0.00032319638,0.00041036808,0.0000016295145,0.0000024688447,0.0000035895453,0.0004939423],"genre_scores_gemma":[0.00057692325,0.99811745,0.000076130564,0.00023418598,0.0005255266,0.0000031716104,0.00000752255,9.600383e-7,0.00045810937],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975914,0.000060748764,0.000035327343,0.000034803335,0.00008764465,0.00002241112],"domain_scores_gemma":[0.99971575,0.00011255207,0.000040013587,0.000012927924,0.00007155227,0.000047153644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007735463,0.0012382682,0.0015797626,0.0017279538,0.0004001336,0.001301597,0.0011223311,0.0018246545,0.0018442622],"category_scores_gemma":[0.0007717943,0.00025085078,0.00033627005,0.0021062593,0.0013172069,0.0023291537,0.0011293837,0.00253333,0.002452097],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000120136174,0.00009055961,0.00030205832,0.009890231,0.00006699044,0.0005772952,0.00021527514,0.00054740097,0.0023090674,0.010141292,0.07073052,0.9050092],"study_design_scores_gemma":[0.00002742749,0.000086648775,0.0010211089,0.0034073764,0.000039196635,0.002264209,0.00013070156,0.00009996458,0.00034683885,0.00868338,0.98387295,0.000020275653],"about_ca_topic_score_codex":0.0007440112,"about_ca_topic_score_gemma":0.000852606,"teacher_disagreement_score":0.0018442622,"about_ca_system_score_codex":0.00087012985,"about_ca_system_score_gemma":0.0012508675,"threshold_uncertainty_score":0.0063132048},"labels":[],"label_agreement":null},{"id":"W1533007713","doi":"10.4049/jimmunol.0804135","title":"Leukotriene B4 Potentiates CpG Signaling for Enhanced Cytokine Secretion by Human Leukocytes","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"TLR9; Secretion; Proinflammatory cytokine; Leukotriene B4; CpG Oligodeoxynucleotide; p38 mitogen-activated protein kinases; Cell biology; Biology; Innate immune system; Cytokine; Signal transduction; Immune system; Immunology; Inflammation; MAPK/ERK pathway; Biochemistry; Gene expression","score_opus":0.00893805393672138,"score_gpt":0.24321132829724587,"score_spread":0.2342732743605245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1533007713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98960656,0.0053088735,0.0023910594,0.00024044327,0.00008131217,0.00011287506,0.0005509925,0.00006638589,0.0016415457],"genre_scores_gemma":[0.99053544,0.0025283461,0.0028155616,0.00026290497,0.00006926033,0.00018713204,0.0012882241,0.000015730702,0.0022973632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997012,0.00012417228,0.000025787422,0.000032361517,0.000057638677,0.000058835507],"domain_scores_gemma":[0.99992144,0.000017543767,0.0000208219,0.000009461391,0.0000120555505,0.00001870187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003209114,0.0003907748,0.00036696703,0.00021194233,0.00012776113,0.00032182626,0.00014187083,0.00024638008,0.003333352],"category_scores_gemma":[0.0003003259,0.00011542938,0.00033223475,0.00014383544,0.000113965565,0.00012825585,0.00031907123,0.00039749284,0.0010257175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011547378,0.000085474385,0.00026605534,0.00013540784,0.000012274172,0.0001515997,0.000034878572,0.00004918062,0.99458236,0.00003939639,0.000119117656,0.0033694592],"study_design_scores_gemma":[0.00027412467,0.0022940151,0.010583516,0.00004765735,0.00009001484,0.0008008698,0.00007551589,0.0008448394,0.97778535,0.00008751521,0.0071066497,0.000009999951],"about_ca_topic_score_codex":0.00042459124,"about_ca_topic_score_gemma":0.00057491247,"teacher_disagreement_score":0.003333352,"about_ca_system_score_codex":0.0001984514,"about_ca_system_score_gemma":0.00027412074,"threshold_uncertainty_score":0.011151195},"labels":[],"label_agreement":null},{"id":"W1536891080","doi":"10.1096/fasebj.29.1_supplement.lb435","title":"Neutrophilia Delays Equine Neutrophil Apoptosis","year":2015,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Neutrophilia; Propidium iodide; Apoptosis; Ex vivo; Annexin; Incubation; In vivo; Reperfusion injury; Andrology; Immunology; Granulocyte; In vitro; Medicine; Chemistry; Ischemia; Biology; Internal medicine; Programmed cell death; Biochemistry","score_opus":0.02664668583611306,"score_gpt":0.24220623008780387,"score_spread":0.2155595442516908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1536891080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99643326,0.0020649063,0.0008025324,0.000079930076,0.000025147732,0.000022717542,0.00004159927,0.000014911692,0.00051506975],"genre_scores_gemma":[0.9965927,0.0008162286,0.0008401427,0.00006534342,0.000022429458,0.00003635165,0.00012858598,0.0000045484107,0.001493617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997633,0.000095830736,0.000018250048,0.000030429816,0.000040955252,0.000051251318],"domain_scores_gemma":[0.999782,0.000060063816,0.000064700645,0.000023010665,0.000034099758,0.000036092202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002598582,0.0002289996,0.0002724137,0.000114491675,0.000105916675,0.00029157542,0.000120984776,0.00024850763,0.0014248983],"category_scores_gemma":[0.00047572347,0.00008528963,0.00014267652,0.00003504888,0.00022408346,0.00019648367,0.00015769874,0.00047427366,0.00027694678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022464818,0.00013070769,0.0011667332,0.00015263303,0.000009722373,0.00009729818,0.000084164494,0.00008396919,0.9886153,0.00008473566,0.00010786845,0.0072205053],"study_design_scores_gemma":[0.00016897437,0.011829056,0.031084727,0.0000775421,0.000048063583,0.0009184769,0.00023651544,0.00094302255,0.94781977,0.00012231726,0.006740969,0.000010644977],"about_ca_topic_score_codex":0.00027948632,"about_ca_topic_score_gemma":0.0008088582,"teacher_disagreement_score":0.0014248983,"about_ca_system_score_codex":0.00015743986,"about_ca_system_score_gemma":0.00015333707,"threshold_uncertainty_score":0.004766822},"labels":[],"label_agreement":null},{"id":"W1540886610","doi":"10.1111/j.1600-6143.2012.04196.x","title":"Induction of Alloimmune Tolerance in Heart Transplantation Through Gene Silencing of TLR Adaptors","year":2012,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Canadian Institutes of Health Research","keywords":"TRIF; Gene silencing; FOXP3; Medicine; Transplantation; Cancer research; Immune system; Receptor; Small interfering RNA; Immunology; In vivo; Signal transduction; Heart transplantation; Innate immune system; Cell biology; Biology; Toll-like receptor; Gene; Transfection; Internal medicine","score_opus":0.011502808539818164,"score_gpt":0.24742636638379797,"score_spread":0.2359235578439798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1540886610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99515176,0.0009840067,0.0025229508,0.00016865222,0.00012362262,0.000027257402,0.000074123265,0.00007578595,0.00087187096],"genre_scores_gemma":[0.99711347,0.0004300303,0.00092019665,0.00008220888,0.000028735709,0.00004858958,0.00009812117,0.000017603772,0.0012610138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996939,0.00006588782,0.00003333089,0.00005107465,0.000055841956,0.00009991952],"domain_scores_gemma":[0.9998419,0.00003107715,0.00004923865,0.000026565476,0.000012293495,0.000038851293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043484228,0.00035922482,0.00038669826,0.00027610577,0.00025392266,0.0005037745,0.00026191774,0.00042650336,0.0014608587],"category_scores_gemma":[0.00024367296,0.00018927222,0.00036723437,0.00013748476,0.0004424053,0.0003426137,0.00029574952,0.0016477909,0.00031476488],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006839245,0.00018338874,0.00013255434,0.000045321733,0.000011362734,0.000061781444,0.000026522144,0.00013647087,0.9958929,0.00040314716,0.00009048718,0.0023320888],"study_design_scores_gemma":[0.00016767177,0.0017073707,0.0021505523,0.000012519906,0.00006124344,0.00025123413,0.00007427501,0.0015344789,0.99220496,0.00022766658,0.001597658,0.00001031015],"about_ca_topic_score_codex":0.000105401625,"about_ca_topic_score_gemma":0.00022091872,"teacher_disagreement_score":0.0014608587,"about_ca_system_score_codex":0.00021603922,"about_ca_system_score_gemma":0.0002592813,"threshold_uncertainty_score":0.0048870444},"labels":[],"label_agreement":null},{"id":"W1542681822","doi":"10.1159/000430913","title":"TIR-Domain-Containing Adaptor-Inducing Interferon-β (TRIF) Mediates Antibacterial Defense during Gram-Negative Pneumonia by Inducing Interferon-&amp;#947;","year":2015,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TRIF; Microbiology; Interferon; Signal transducing adaptor protein; Klebsiella pneumoniae; Immunology; Biology; Toll-like receptor; Innate immune system; Signal transduction; Immune system; Cell biology; Escherichia coli; Biochemistry; Gene","score_opus":0.025773745312804786,"score_gpt":0.2580995220741041,"score_spread":0.23232577676129929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1542681822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834462,0.0039983033,0.007675845,0.00033620573,0.00007604687,0.000058078953,0.000788748,0.00042064712,0.0031999482],"genre_scores_gemma":[0.98742956,0.00183125,0.005642261,0.00011131864,0.000019410882,0.000055777204,0.0011364397,0.000045769768,0.0037281886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998273,0.000038076978,0.000014485537,0.00002605018,0.00005065278,0.00004338127],"domain_scores_gemma":[0.9998685,0.0000070835013,0.00005124967,0.000008038808,0.000014747004,0.000050321098],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019932333,0.00052178325,0.00026476214,0.00021130836,0.00017877124,0.00025367053,0.00021382353,0.00038945235,0.0014374707],"category_scores_gemma":[0.000091569236,0.00014499201,0.00024364368,0.00009251125,0.0003099068,0.00018905163,0.00029088266,0.00061469804,0.00091751845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002030643,0.000024262126,0.00022518642,0.00004102702,0.000004096968,0.000047358917,0.0000055626642,0.000032304193,0.99744993,0.00009431047,0.000096163865,0.0017768268],"study_design_scores_gemma":[0.00004948868,0.00061428023,0.009011411,0.000020963502,0.0000258469,0.0009150462,0.000030019322,0.0010349335,0.9831982,0.000106144435,0.004985459,0.000008083929],"about_ca_topic_score_codex":0.00028791168,"about_ca_topic_score_gemma":0.00027300155,"teacher_disagreement_score":0.0014374707,"about_ca_system_score_codex":0.00029304437,"about_ca_system_score_gemma":0.00025246988,"threshold_uncertainty_score":0.004808843},"labels":[],"label_agreement":null},{"id":"W1542844386","doi":"10.4049/jimmunol.174.8.5124","title":"Neutrophils That Infiltrate the Central Nervous System Regulate T Cell Responses","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Immunology; Experimental autoimmune encephalomyelitis; Biology; Central nervous system; T cell; Inflammation; Effector; Neuroscience; Immune system","score_opus":0.010592106160649116,"score_gpt":0.20847538762497944,"score_spread":0.19788328146433032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1542844386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9833323,0.011146965,0.0022113381,0.0002541178,0.00005814682,0.0000349145,0.00017120365,0.000056179186,0.0027349098],"genre_scores_gemma":[0.991476,0.004546525,0.0015888215,0.0000931162,0.000043770142,0.000023929319,0.00012592254,0.0000069901243,0.0020949726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998847,0.000033825963,0.0000070614724,0.000020409987,0.00001898797,0.0000350789],"domain_scores_gemma":[0.9999211,0.000010617282,0.000027408207,0.0000075840308,0.00001646337,0.000016785423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013441002,0.00021598587,0.00016494728,0.00016534963,0.00012067231,0.00029089264,0.00008620756,0.00018225917,0.00093571475],"category_scores_gemma":[0.00014072936,0.00006222103,0.000084002444,0.00009838813,0.00017603186,0.00020996876,0.00016979694,0.00027583135,0.0003633744],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001965428,0.00002126386,0.004044168,0.00008097917,0.0000066372677,0.0001940334,0.0000449744,0.000049428596,0.985285,0.00031043674,0.00016419229,0.009602379],"study_design_scores_gemma":[0.00009885888,0.0009552814,0.11177004,0.00013531029,0.000115724215,0.0037379381,0.00054852094,0.0016118337,0.8603603,0.0017766037,0.018871196,0.000018342162],"about_ca_topic_score_codex":0.00024152575,"about_ca_topic_score_gemma":0.00049439794,"teacher_disagreement_score":0.00093571475,"about_ca_system_score_codex":0.00015822757,"about_ca_system_score_gemma":0.00010755522,"threshold_uncertainty_score":0.0031302571},"labels":[],"label_agreement":null},{"id":"W1543052543","doi":"10.4049/jimmunol.0901140","title":"MyD88 Adaptor-Like Is Not Essential for TLR2 Signaling and Inhibits Signaling by TLR3","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Biotechnology and Biological Sciences Research Council","keywords":"TLR2; TLR3; TLR4; Signal transducing adaptor protein; Toll-like receptor; Cell biology; Signal transduction; Ligand (biochemistry); Receptor; Chemistry; Innate immune system; Biology; Biochemistry","score_opus":0.00941090005275775,"score_gpt":0.23400659470039456,"score_spread":0.22459569464763682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1543052543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99483466,0.0011908783,0.0023562715,0.00008772228,0.00002637744,0.000023573592,0.0005272118,0.00008720171,0.00086623954],"genre_scores_gemma":[0.9941643,0.00038253746,0.0018815547,0.00007868026,0.000009304152,0.000046770452,0.0017816852,0.00003500143,0.0016200984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997162,0.000048549722,0.000027892684,0.000042301865,0.000080559745,0.000084451814],"domain_scores_gemma":[0.9997863,0.000032554028,0.00008093249,0.00003735607,0.00002376814,0.00003909107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016342216,0.00033599194,0.00030052292,0.00015607162,0.00014980597,0.00030203408,0.00020519797,0.00026358466,0.001675195],"category_scores_gemma":[0.000179249,0.00017324886,0.00038487758,0.00012517627,0.00018975268,0.00022035473,0.00031294054,0.0005001785,0.0009773648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009814823,0.000014209427,0.00042441787,0.000029885341,0.0000041278386,0.00006039608,0.000006627138,0.000025148373,0.9986505,0.000035623496,0.0000256055,0.0006253475],"study_design_scores_gemma":[0.000020800428,0.00016546604,0.013879382,0.000009657538,0.000010707092,0.0010997341,0.000032636963,0.00070218724,0.9798783,0.0000406339,0.004154767,0.0000056666686],"about_ca_topic_score_codex":0.00019359488,"about_ca_topic_score_gemma":0.0002770387,"teacher_disagreement_score":0.001675195,"about_ca_system_score_codex":0.00025872793,"about_ca_system_score_gemma":0.00018277674,"threshold_uncertainty_score":0.0056040883},"labels":[],"label_agreement":null},{"id":"W1544979073","doi":"10.25011/cim.v31i3.3469","title":"The significance of Toll-like receptor 4 (TLR4) expression in patients with chronic hepatitis B","year":2008,"lang":"en","type":"article","venue":"Clinical and investigative medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"TLR4; Toll; Toll-like receptor; Chronic hepatitis; Medicine; Receptor; Expression (computer science); Internal medicine; Immunology; Innate immune system; Virus; Computer science","score_opus":0.04360572244852938,"score_gpt":0.27141934116505884,"score_spread":0.22781361871652944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1544979073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985875,0.0009204323,0.000070179434,0.0000375275,0.000005363882,0.0000049525456,0.00009080534,0.000004262827,0.00027906735],"genre_scores_gemma":[0.99939084,0.00019885646,0.0000879156,0.00002577096,0.0000125102715,0.000006377823,0.00013587564,0.0000010667767,0.0001407862],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983335,0.00004857227,0.000019310213,0.000034393663,0.000028566012,0.000035693527],"domain_scores_gemma":[0.9996953,0.00006663998,0.00013009665,0.000012111345,0.0000356033,0.00006017264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021506115,0.00028073668,0.00027969983,0.0006110723,0.00039982438,0.00028660015,0.00010645384,0.00039300777,0.0016551156],"category_scores_gemma":[0.0005463314,0.00017523757,0.00017984769,0.00036814436,0.00025387717,0.00024643203,0.0002304643,0.0002238522,0.00019039807],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006977536,0.000042159176,0.98949593,0.000069356036,0.00003878426,0.0003722005,0.00008302723,0.00003121626,0.005401858,0.000013891129,0.00011152872,0.0036422699],"study_design_scores_gemma":[0.000031091644,0.00026710107,0.9965432,0.000017212193,0.00004668632,0.001577112,0.00021211061,0.0001429084,0.00070953055,0.000026514064,0.00042193008,0.000004658898],"about_ca_topic_score_codex":0.0009794747,"about_ca_topic_score_gemma":0.00088929926,"teacher_disagreement_score":0.0016551156,"about_ca_system_score_codex":0.00015091195,"about_ca_system_score_gemma":0.00010955204,"threshold_uncertainty_score":0.0055368543},"labels":[],"label_agreement":null},{"id":"W15494169","doi":"10.4049/jimmunol.190.supp.187.9","title":"SIGIRR limits colitic and epithelial homeostatic responses, but promotes microbiota dependent colonization resistance to enteric bacterial pathogens (P3067)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Citrobacter rodentium; Colonisation resistance; Biology; Pathogen; Microbiology; Colonization; Immune system; Gastrointestinal tract; Host (biology); Immunology; Ecology","score_opus":0.007885013728741848,"score_gpt":0.21234939140251102,"score_spread":0.20446437767376918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W15494169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933455,0.0012454299,0.0011316875,0.00030057854,0.00007908393,0.000030817686,0.00091412175,0.00024650048,0.0027063114],"genre_scores_gemma":[0.9874817,0.00069848413,0.0014569646,0.00019923074,0.000030494859,0.000064771,0.0010866696,0.000078332705,0.0089033125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997008,0.000047865262,0.000028846947,0.000056661498,0.00007599724,0.000089820576],"domain_scores_gemma":[0.99963176,0.000032045595,0.00009831449,0.00003972405,0.000027409893,0.00017075335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016583136,0.00048098742,0.000368081,0.00024193879,0.00015829051,0.00044298044,0.00035169735,0.0005805378,0.003249004],"category_scores_gemma":[0.00015118616,0.00021614801,0.00033204412,0.00014060475,0.0003885749,0.0001885893,0.0003084854,0.0014334824,0.001675727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003071987,0.0000781663,0.00019648905,0.000033061162,0.0000036160827,0.000072570445,0.0000064310193,0.00003993509,0.99815804,0.000059794762,0.000097540746,0.0009472037],"study_design_scores_gemma":[0.00010608114,0.0031850801,0.0134738935,0.00002914281,0.000031783664,0.0010707998,0.00011509761,0.0011633185,0.9760853,0.00013360498,0.0045884233,0.000017462164],"about_ca_topic_score_codex":0.00035756224,"about_ca_topic_score_gemma":0.0006435326,"teacher_disagreement_score":0.003249004,"about_ca_system_score_codex":0.00016767783,"about_ca_system_score_gemma":0.0002875622,"threshold_uncertainty_score":0.010868967},"labels":[],"label_agreement":null},{"id":"W1551045512","doi":"10.1111/j.1600-065x.2011.01045.x","title":"The machinery of Nod‐like receptors: refining the paths to immunity and cell death","year":2011,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; Effector; Pattern recognition receptor; Receptor; Immune system; Immunity; Nod; Cell biology; Inflammation; Acquired immune system; Signal transduction; Immunology; Autophagy; Programmed cell death; Inflammasome; Neuroscience; Genetics; Gene","score_opus":0.07817191724807063,"score_gpt":0.31546702311295316,"score_spread":0.23729510586488253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1551045512","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000107573964,0.9974885,0.00033279555,0.00041571746,0.00048448722,0.0000047008966,0.000008745531,0.000010839839,0.0011465757],"genre_scores_gemma":[0.00087156496,0.9965796,0.00031890176,0.0002813576,0.0005041674,0.000007804696,0.00002624514,0.0000023745706,0.0014080014],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997887,0.00003976349,0.00002594737,0.000035830122,0.00008687812,0.000022902143],"domain_scores_gemma":[0.9997718,0.00006320579,0.00003427246,0.000012639917,0.000072819814,0.000045258508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007142938,0.00095754885,0.0011599737,0.0012867214,0.00029814546,0.0011309771,0.001143644,0.0012408918,0.0024700651],"category_scores_gemma":[0.00047089666,0.00027899913,0.0002879474,0.0012514241,0.0010778531,0.0023064679,0.0007592034,0.0021437225,0.0033302768],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011849489,0.000049617734,0.00015577256,0.008551741,0.000053526448,0.0003159406,0.00009429459,0.0004498895,0.006601228,0.018879298,0.04298678,0.9217434],"study_design_scores_gemma":[0.000013194077,0.000048581576,0.00029477026,0.0006986939,0.000013192668,0.00076654815,0.000031529024,0.00004812533,0.000817447,0.0032730845,0.99398535,0.000009564291],"about_ca_topic_score_codex":0.0004962388,"about_ca_topic_score_gemma":0.00064785994,"teacher_disagreement_score":0.0024700651,"about_ca_system_score_codex":0.0009604009,"about_ca_system_score_gemma":0.00095515605,"threshold_uncertainty_score":0.00826323},"labels":[],"label_agreement":null},{"id":"W1554415868","doi":"10.1016/s1567-7443(05)80006-7","title":"Host Defence: An Interaction of Neuroendocrine-, Metabolic- and Immune Mechanisms in the Interest of Survival","year":2005,"lang":"en","type":"book-chapter","venue":"Neuroimmune biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Immune system; Innate immune system; Biology; Immunology; Cell biology; Receptor; Genetics","score_opus":0.030404195680994468,"score_gpt":0.27184273210074483,"score_spread":0.24143853641975035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1554415868","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036953522,0.582169,0.021925425,0.013236828,0.0063572964,0.000047984864,0.00008672744,0.00022018125,0.37226123],"genre_scores_gemma":[0.050620176,0.36483786,0.023105891,0.009323767,0.005495902,0.00013904036,0.0001382092,0.00014739214,0.5461917],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9998617,0.00002668224,0.000004348169,0.000019513642,0.00007304261,0.000014707283],"domain_scores_gemma":[0.99987316,0.000071884344,0.0000071342993,0.000006411205,0.000021214892,0.000020208461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040628907,0.0007102428,0.00079320703,0.0006063828,0.000529291,0.0031691573,0.0008093563,0.0012607942,0.008695464],"category_scores_gemma":[0.00028215535,0.00021341821,0.00020869933,0.00071802124,0.0021283783,0.0030077957,0.0008345112,0.0021770576,0.0034746772],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006650046,0.00004982398,0.00018312786,0.00070191984,0.000020333768,0.00030517875,0.00118996,0.0005466547,0.01210881,0.5817176,0.11820524,0.28490484],"study_design_scores_gemma":[0.000007101801,0.000050667557,0.00029565473,0.00036721767,0.0000065308664,0.00058945897,0.00030036687,0.00023368503,0.00082502805,0.14816861,0.84914213,0.000013557058],"about_ca_topic_score_codex":0.0004036554,"about_ca_topic_score_gemma":0.0011255189,"teacher_disagreement_score":0.008695464,"about_ca_system_score_codex":0.0007510064,"about_ca_system_score_gemma":0.0007986192,"threshold_uncertainty_score":0.029089212},"labels":[],"label_agreement":null},{"id":"W1555182068","doi":"10.1016/s1567-7443(01)80026-0","title":"Fever and antipyresis","year":2001,"lang":"en","type":"book-chapter","venue":"Neuroimmune biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council","keywords":"Circumventricular organs; Immunology; Immune system; Secretion; Cytokine; Lipopolysaccharide; Hypothalamus; Biology; Prostaglandin; Tumor necrosis factor alpha; Medicine; Neuroscience; Cell biology; Endocrinology","score_opus":0.015540651458358359,"score_gpt":0.22373083705966765,"score_spread":0.20819018560130928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1555182068","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027470947,0.46884993,0.0059278654,0.009004938,0.012007666,0.000061912135,0.00014114667,0.00020796542,0.5010515],"genre_scores_gemma":[0.030091695,0.20420104,0.004437004,0.008906136,0.00725471,0.00010931294,0.00015283265,0.00009102535,0.74475616],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998821,0.000030431922,0.000007520327,0.000017821618,0.000045592933,0.00001645582],"domain_scores_gemma":[0.9999294,0.000025038742,0.000007138403,0.000008058918,0.000019072502,0.000011235684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020668165,0.00063509255,0.00052253227,0.00064561603,0.0003665665,0.0010085006,0.00050079345,0.00096303935,0.016387114],"category_scores_gemma":[0.0004323808,0.00016130306,0.0002804975,0.0004150051,0.0008162467,0.001308559,0.0007037856,0.0020313195,0.006411824],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012467327,0.00009772623,0.00017906424,0.0009454295,0.000016365355,0.00086613855,0.000573365,0.00023773513,0.0049576997,0.13954267,0.22109309,0.631366],"study_design_scores_gemma":[0.000008603385,0.000042431355,0.00034632933,0.00022287315,0.000007584464,0.0017100595,0.0000759033,0.000060400358,0.00047107093,0.018199582,0.9788486,0.0000066002517],"about_ca_topic_score_codex":0.00072549784,"about_ca_topic_score_gemma":0.0016227731,"teacher_disagreement_score":0.016387114,"about_ca_system_score_codex":0.0004759453,"about_ca_system_score_gemma":0.0005002183,"threshold_uncertainty_score":0.0548203},"labels":[],"label_agreement":null},{"id":"W1557836533","doi":"10.4049/jimmunol.181.3.2145","title":"Points of Control Exerted along the Macrophage-Endothelial Cell-Polymorphonuclear Neutrophil Axis by PECAM-1 in the Innate Immune Response of Acute Colonic Inflammation","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"","keywords":"Innate immune system; Cell biology; Chemokine; Inflammation; Immune system; Immunology; CXC chemokine receptors; Endothelial stem cell; Biology; Chemotaxis; Chemistry; Receptor; Chemokine receptor; In vitro; Biochemistry","score_opus":0.00561922537965235,"score_gpt":0.20606678572281814,"score_spread":0.2004475603431658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1557836533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958047,0.0014430231,0.002055689,0.00006256524,0.0000166032,0.000017908344,0.000090320544,0.00002751061,0.0004816407],"genre_scores_gemma":[0.99715376,0.0004933546,0.0015810768,0.000035994097,0.0000088337465,0.00003213684,0.000066029876,0.0000068824856,0.00062210514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967945,0.0000641804,0.000028215134,0.00007060443,0.00007097567,0.000086478154],"domain_scores_gemma":[0.99974436,0.0000245262,0.00011154867,0.00002440399,0.000024711679,0.00007052846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002125843,0.00038322384,0.00024312365,0.00026121573,0.00016483926,0.0004944321,0.00017309363,0.0004012111,0.0008224209],"category_scores_gemma":[0.0001407817,0.00014469106,0.00023934021,0.00010087115,0.0003886016,0.00042258523,0.00029272298,0.0011290794,0.00022799916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002027953,0.000020516984,0.00022516647,0.000018466844,0.0000019242873,0.000045266883,0.000013920641,0.00004806949,0.9985636,0.00014572585,0.000007713838,0.00070690265],"study_design_scores_gemma":[0.00003527405,0.00060252304,0.008049404,0.000012099349,0.000018763641,0.00025548806,0.00006379488,0.00060532504,0.98952883,0.000114808565,0.00070631714,0.0000074517407],"about_ca_topic_score_codex":0.0002163513,"about_ca_topic_score_gemma":0.0002826567,"teacher_disagreement_score":0.0008224209,"about_ca_system_score_codex":0.0003349389,"about_ca_system_score_gemma":0.00018422338,"threshold_uncertainty_score":0.0027512908},"labels":[],"label_agreement":null},{"id":"W1560312836","doi":"10.1111/j.1600-065x.2011.01063.x","title":"T‐cell intrinsic effects of GITR and 4‐1BB during viral infection and cancer immunotherapy","year":2011,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Immunology; Immunotherapy; Biology; T cell; Antibody; CD137; Cancer immunotherapy; Effector; Cancer research; Cytotoxic T cell; CD8; In vitro","score_opus":0.02807818161497566,"score_gpt":0.2978473005936034,"score_spread":0.26976911897862776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1560312836","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96743226,0.024695575,0.0033901702,0.00021660079,0.000105494364,0.00005075282,0.0000878203,0.00009888828,0.0039224294],"genre_scores_gemma":[0.9935933,0.0031563407,0.0012400948,0.00011379222,0.000051528943,0.000041413357,0.00011048428,0.000010182663,0.0016829249],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996611,0.000097981814,0.00001657638,0.000037001955,0.000056954068,0.00013040996],"domain_scores_gemma":[0.99993265,0.000009408482,0.000018732995,0.000008127296,0.000009227913,0.00002188677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002414477,0.0003226167,0.0003026988,0.0001944952,0.00016485718,0.00028110013,0.00019134463,0.0005057754,0.0005893756],"category_scores_gemma":[0.00014493341,0.00010127198,0.00026633387,0.00012985687,0.00023574146,0.00024765494,0.0002359139,0.00092303724,0.00018454669],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003098266,0.000065966386,0.00035625588,0.00010604762,0.000011825668,0.000113982525,0.000034561825,0.00023642111,0.99220145,0.00035383712,0.00007765747,0.006132151],"study_design_scores_gemma":[0.00009451234,0.003569043,0.012896094,0.000039407845,0.0001135633,0.0015954511,0.00008282638,0.0017647608,0.9659213,0.00059747335,0.013308765,0.000016875445],"about_ca_topic_score_codex":0.0003412202,"about_ca_topic_score_gemma":0.00050023047,"teacher_disagreement_score":0.0005893756,"about_ca_system_score_codex":0.00035369812,"about_ca_system_score_gemma":0.00027970222,"threshold_uncertainty_score":0.0025662184},"labels":[],"label_agreement":null},{"id":"W1560497272","doi":"10.1046/j.1471-4159.2001.00080.x","title":"Anti‐inflammatory effects of prostaglandin E<sub>2</sub> in the central nervous system in response to brain injury and circulating lipopolysaccharide","year":2001,"lang":"en","type":"article","venue":"Journal of Neurochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council; Canadian Institutes of Health Research; Genentech; Medical Research Council Canada","keywords":"Lipopolysaccharide; Tumor necrosis factor alpha; Prostaglandin E2; Cyclooxygenase; Prostaglandin; Inflammation; Microglia; Prostaglandin E; Prostaglandin D2; Biology; Endocrinology; Central nervous system; Parenchyma; Proinflammatory cytokine; Immunology; Medicine; Internal medicine; Pathology; Biochemistry","score_opus":0.004755928587812112,"score_gpt":0.21587934384206728,"score_spread":0.21112341525425515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1560497272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847937,0.012064925,0.0012999243,0.00012772135,0.00010032002,0.0000314172,0.00012566474,0.00005668563,0.001399585],"genre_scores_gemma":[0.990378,0.005779283,0.001606368,0.00014722627,0.00012792127,0.000058729674,0.00022380619,0.000012456827,0.001666117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993753,0.000013050867,0.0000058165374,0.000008490085,0.000009289387,0.000025761165],"domain_scores_gemma":[0.9998934,0.000017579485,0.000029435603,0.000011644577,0.0000117115005,0.000036170793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015493362,0.00043051667,0.000380901,0.00021680373,0.0001183081,0.00024099393,0.00011792403,0.00023054254,0.0010885177],"category_scores_gemma":[0.00015343199,0.000099156896,0.00019169632,0.00013629407,0.00033205267,0.00017063133,0.000113677626,0.00044943174,0.00016810047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021276427,0.00010805133,0.00026979094,0.00021540113,0.000016680178,0.00028960936,0.000021860915,0.000067539135,0.98783326,0.0001262764,0.00006414333,0.008859724],"study_design_scores_gemma":[0.00030679555,0.0049967263,0.02445394,0.000042370037,0.00010087303,0.0010913962,0.00008799804,0.000498618,0.9651488,0.00025503346,0.003000009,0.000017398215],"about_ca_topic_score_codex":0.00026595706,"about_ca_topic_score_gemma":0.00033049125,"teacher_disagreement_score":0.0010885177,"about_ca_system_score_codex":0.0001793254,"about_ca_system_score_gemma":0.00024049377,"threshold_uncertainty_score":0.0036414862},"labels":[],"label_agreement":null},{"id":"W1561649423","doi":"10.4049/jimmunol.180.6.3797","title":"Attenuating Regulatory T Cell Induction by TLR Agonists through Inhibition of p38 MAPK Signaling in Dendritic Cells Enhances Their Efficacy as Vaccine Adjuvants and Cancer Immunotherapeutics","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Science Foundation Ireland","keywords":"Dendritic cell; MAPK/ERK pathway; p38 mitogen-activated protein kinases; Signal transduction; Cell biology; Cancer research; Immunology; Biology; Immune system","score_opus":0.01454543343631908,"score_gpt":0.24608068358361354,"score_spread":0.23153525014729445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1561649423","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99168795,0.0029531291,0.0033680603,0.00020350594,0.0000622326,0.00005172851,0.0001423702,0.000090594796,0.0014404347],"genre_scores_gemma":[0.99341464,0.0017944917,0.0032728747,0.00005224278,0.000042943382,0.00005283759,0.0001690914,0.000015883705,0.0011848361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998155,0.000050378116,0.000013978482,0.0000206285,0.000041421416,0.000058025125],"domain_scores_gemma":[0.99992406,0.000018799054,0.000019850682,0.000010066074,0.000009023189,0.00001804993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021237279,0.00041859772,0.00033728144,0.00017644322,0.00010252319,0.00023304252,0.00019364843,0.00019547499,0.0009732182],"category_scores_gemma":[0.00019400087,0.00013258931,0.00017516672,0.00011896208,0.0002030398,0.0002250652,0.00020002185,0.0006011202,0.0003967531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023939085,0.00008574825,0.000119246804,0.000054090495,0.0000030939352,0.000048562066,0.0000072211915,0.000104152736,0.9962733,0.00008576993,0.000050586936,0.0029287722],"study_design_scores_gemma":[0.000059678034,0.0005775975,0.0008911939,0.000004786417,0.000015719252,0.00020269825,0.000009402996,0.0014504087,0.9940978,0.0000744615,0.0026136553,0.000002444294],"about_ca_topic_score_codex":0.00011023905,"about_ca_topic_score_gemma":0.0001793603,"teacher_disagreement_score":0.0009732182,"about_ca_system_score_codex":0.00018015972,"about_ca_system_score_gemma":0.00020011913,"threshold_uncertainty_score":0.0032557845},"labels":[],"label_agreement":null},{"id":"W1562339034","doi":"10.4049/jimmunol.172.1.608","title":"Intercellular Adhesion Molecule-1 Mediates Cellular Cross-Talk between Parenchymal and Immune Cells after Lipopolysaccharide Neutralization","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"A549 cell; Lipopolysaccharide; Immune system; Cell biology; Biology; Tumor necrosis factor alpha; Molecular biology; Immunology; Cell culture","score_opus":0.007441874056179861,"score_gpt":0.22451293108357248,"score_spread":0.21707105702739263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1562339034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99307793,0.003234214,0.0017726341,0.00015074303,0.00004175608,0.000020987365,0.00006252514,0.0000395071,0.0015996556],"genre_scores_gemma":[0.99711835,0.0009852444,0.0005779039,0.00010676826,0.00004230362,0.000027340975,0.00013133384,0.000007837221,0.0010028812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995983,0.00011397754,0.000016611562,0.000033752767,0.000063662905,0.00017373815],"domain_scores_gemma":[0.99976546,0.00007518815,0.00004152676,0.000030658663,0.000026575808,0.000060670238],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024543243,0.00043101312,0.00039804078,0.00024454738,0.00020104882,0.0004846555,0.00021002544,0.00038118215,0.0016956684],"category_scores_gemma":[0.0003738708,0.00017245658,0.00026527152,0.00011335128,0.00022818969,0.0003631759,0.0004500774,0.0010878594,0.0005368282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020586915,0.000026426444,0.00020759898,0.000038024587,0.000004067688,0.000120248915,0.00001780031,0.00002207071,0.9977138,0.0001006049,0.000032413016,0.0015110747],"study_design_scores_gemma":[0.000033037744,0.00069243845,0.015335743,0.00002127466,0.000036499212,0.0004083282,0.00010266451,0.0010540312,0.9809201,0.0002289175,0.0011616125,0.0000052369705],"about_ca_topic_score_codex":0.0001285377,"about_ca_topic_score_gemma":0.0001624626,"teacher_disagreement_score":0.0016956684,"about_ca_system_score_codex":0.00027224934,"about_ca_system_score_gemma":0.00014542969,"threshold_uncertainty_score":0.005672574},"labels":[],"label_agreement":null},{"id":"W1566056195","doi":"10.4049/jimmunol.0903429","title":"IFN Regulatory Factor 3 Contributes to the Host Response during <i>Pseudomonas aeruginosa</i> Lung Infection in Mice","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Killam Trusts","keywords":"IRF3; Chemokine; Pseudomonas aeruginosa; Biology; Immunology; Immune system; Microbiology; Innate immune system","score_opus":0.004648654373541552,"score_gpt":0.22103771612275477,"score_spread":0.2163890617492132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1566056195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98102355,0.004456206,0.006170679,0.0010569762,0.00014752685,0.00014555082,0.001960889,0.0007854551,0.004253241],"genre_scores_gemma":[0.98639953,0.0016400528,0.0042879833,0.0006240071,0.000064140215,0.00022882235,0.0013139956,0.00020259008,0.0052388525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953926,0.000068909314,0.000043476728,0.00009221059,0.000105421444,0.00015075674],"domain_scores_gemma":[0.99953187,0.000027978327,0.0002139641,0.00004674678,0.000036178822,0.00014317672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037904206,0.0010515542,0.00051449146,0.00074374396,0.0003093035,0.00074341195,0.0004121352,0.0010272656,0.0020207816],"category_scores_gemma":[0.0002230288,0.00046041122,0.00089276617,0.000187923,0.00074876007,0.00047624318,0.0004313691,0.0024461043,0.0010330904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008585964,0.000099578174,0.0005997317,0.00007114387,0.000010406917,0.00018432525,0.000032125732,0.00010297965,0.9956813,0.00020079139,0.00014173226,0.0020172563],"study_design_scores_gemma":[0.00037258505,0.0014434098,0.02435343,0.00009740888,0.00013843036,0.0018760277,0.00019775545,0.0033680405,0.95618725,0.00068517186,0.011232704,0.000047789086],"about_ca_topic_score_codex":0.0007196036,"about_ca_topic_score_gemma":0.00069031154,"teacher_disagreement_score":0.0020207816,"about_ca_system_score_codex":0.0007810735,"about_ca_system_score_gemma":0.0005222549,"threshold_uncertainty_score":0.00676018},"labels":[],"label_agreement":null},{"id":"W1569732092","doi":"","title":"Identification of lipopolysaccharide-binding proteins in porcine milk.","year":2006,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Lactoferrin; Casein; Lipopolysaccharide; Pepsin; Lipopolysaccharide binding protein; Lactation; Digestion (alchemy); Beta-lactoglobulin; Chemistry; Antibody; Acute-phase protein; In vitro; Biochemistry; Biology; CD14; Whey protein; Chromatography; Immunology; Receptor; Enzyme; Inflammation","score_opus":0.009376256359898609,"score_gpt":0.20212468603720388,"score_spread":0.19274842967730527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1569732092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98620635,0.007025633,0.0038763578,0.00018051975,0.00007548032,0.000069079724,0.00097323314,0.000053690583,0.0015397221],"genre_scores_gemma":[0.98254424,0.0028818846,0.008497281,0.00028377326,0.000053134598,0.00008699613,0.003639781,0.000026257718,0.0019865746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998926,0.000020303782,0.0000089357645,0.000025560128,0.000024731164,0.00002792838],"domain_scores_gemma":[0.9997552,0.000069043475,0.000054738968,0.00001692595,0.000047585123,0.000056624613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002202621,0.00057301746,0.0002613799,0.0007557783,0.00015462191,0.00030123175,0.00014330167,0.00042604885,0.0005979517],"category_scores_gemma":[0.0004052553,0.00016548875,0.0003507068,0.00030110683,0.00021268365,0.00023615586,0.00025037362,0.00030033992,0.0004465863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011153097,0.0000097151615,0.0012716096,0.00005304113,0.000005747787,0.00012698909,0.000024258215,0.000017653429,0.99645823,0.000023962935,0.000016876922,0.001880493],"study_design_scores_gemma":[0.000043419863,0.0010167583,0.13795972,0.00012650713,0.00011542303,0.0031866373,0.00029010413,0.0015630026,0.84473175,0.00027843635,0.010663108,0.000025086483],"about_ca_topic_score_codex":0.00045074182,"about_ca_topic_score_gemma":0.00032850346,"teacher_disagreement_score":0.0007557783,"about_ca_system_score_codex":0.00018296942,"about_ca_system_score_gemma":0.00019154907,"threshold_uncertainty_score":0.0020003319},"labels":[],"label_agreement":null},{"id":"W1572664742","doi":"10.1038/nri3834","title":"Regulation of tumour necrosis factor signalling: live or let die","year":2015,"lang":"en","type":"review","venue":"Nature reviews. Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1000,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Fonds National de la Recherche Luxembourg","keywords":"Tumor necrosis factor alpha; Immunology; Cytokine; Necrosis; Cancer research; Rheumatoid arthritis; Inflammation; Medicine; Receptor; Signalling; Apoptosis; Biology; Inflammatory bowel disease; Effector; Disease; Cell biology; Internal medicine","score_opus":0.054555205493720824,"score_gpt":0.3346137848525058,"score_spread":0.280058579358785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1572664742","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007208545,0.99604493,0.00021315465,0.0012562597,0.0011925944,0.0000025591803,0.000015579006,0.0000143398365,0.0011883534],"genre_scores_gemma":[0.00082030613,0.9960051,0.00012633779,0.00083194766,0.0008887846,0.000005358242,0.000029799045,0.0000030805911,0.001289274],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99973756,0.000038793518,0.000030872543,0.000040692223,0.00011543496,0.00003660102],"domain_scores_gemma":[0.99952877,0.00017548531,0.00006714268,0.00002367938,0.00012385071,0.00008123444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008072309,0.001105117,0.0014057008,0.0012192746,0.0003505074,0.001567235,0.001304324,0.001961538,0.0040876833],"category_scores_gemma":[0.0009062773,0.00033524624,0.0004547078,0.0012329168,0.001277641,0.0024700547,0.0012152964,0.003682821,0.003940034],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012991825,0.000045503282,0.00012013114,0.006668551,0.00006738521,0.00020239243,0.00005226698,0.00033856442,0.0035499134,0.011939509,0.10889692,0.86798894],"study_design_scores_gemma":[0.0000116405035,0.000030955904,0.00024358834,0.001077641,0.000025015219,0.00049696374,0.00003287179,0.000044688877,0.00034460594,0.0040701586,0.9936093,0.00001242205],"about_ca_topic_score_codex":0.00050177297,"about_ca_topic_score_gemma":0.0010054805,"teacher_disagreement_score":0.0040876833,"about_ca_system_score_codex":0.0009692065,"about_ca_system_score_gemma":0.0010704385,"threshold_uncertainty_score":0.013674676},"labels":[],"label_agreement":null},{"id":"W1574387337","doi":"10.1523/jneurosci.23-13-05536.2003","title":"Glucocorticoids Play a Fundamental Role in Protecting the Brain during Innate Immune Response","year":2003,"lang":"en","type":"article","venue":"Journal of Neuroscience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Proinflammatory cytokine; Tumor necrosis factor alpha; Lipopolysaccharide; Neurodegeneration; Immune system; Immunology; Biology; Cytokine; Inflammation; Neuroscience; Medicine; Internal medicine; Disease","score_opus":0.010764949524414173,"score_gpt":0.24571359885680158,"score_spread":0.2349486493323874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1574387337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57879317,0.3835721,0.015448369,0.0030302072,0.0010674363,0.00012113565,0.0013580433,0.0008505837,0.015758926],"genre_scores_gemma":[0.9409251,0.049975865,0.004024194,0.00026749706,0.00031699814,0.000035329806,0.0002781683,0.0000216908,0.004155059],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989736,0.000027155655,0.000006742412,0.000016314001,0.000025314868,0.000027089849],"domain_scores_gemma":[0.99985003,0.000016874012,0.000044792574,0.000013406924,0.000024950494,0.0000498934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013280693,0.00040651613,0.0003374995,0.00021418366,0.0002920924,0.0005233121,0.00023518447,0.0004906785,0.0014674419],"category_scores_gemma":[0.00017711459,0.000079541605,0.00016714165,0.00012827457,0.00044646088,0.00025173582,0.00017308952,0.00064841995,0.00049889786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001007349,0.00008813676,0.001611265,0.0006822776,0.000047531936,0.0012895388,0.00012200245,0.00020789805,0.91311693,0.0030333383,0.001747442,0.07704629],"study_design_scores_gemma":[0.00017148574,0.0023372534,0.04286263,0.0002215082,0.00016665395,0.0047516236,0.00046694832,0.00049681886,0.83887875,0.008061357,0.101508856,0.000076104465],"about_ca_topic_score_codex":0.00053704216,"about_ca_topic_score_gemma":0.00082100596,"teacher_disagreement_score":0.0014674419,"about_ca_system_score_codex":0.00036246635,"about_ca_system_score_gemma":0.00040432825,"threshold_uncertainty_score":0.0049090385},"labels":[],"label_agreement":null},{"id":"W157512105","doi":"10.14670/hh-19.1201","title":"Toll-like receptor 4 in normal and inflamed lungs and other organs of pig, dog and cattle.","year":2004,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"TLR4; Pathology; Lung; Biology; Staining; Spleen; Epithelium; Receptor; Immunohistochemistry; Endothelium; Toll-like receptor; Inflammation; Immunology; Innate immune system; Medicine; Endocrinology; Internal medicine","score_opus":0.006900993912681934,"score_gpt":0.1923359263721171,"score_spread":0.18543493245943518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W157512105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99524057,0.0020116337,0.00085847836,0.00007078928,0.000036838614,0.000015427004,0.00024128649,0.000020376136,0.0015044523],"genre_scores_gemma":[0.9967577,0.0004736192,0.0005614929,0.0000930474,0.000011589001,0.000019586778,0.0004736212,0.00000555306,0.0016037549],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997489,0.000050363564,0.000013640069,0.000073445284,0.00004105434,0.000072751376],"domain_scores_gemma":[0.9998247,0.00003619412,0.000043765285,0.00001939868,0.000023046963,0.00005295433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034284426,0.00022196597,0.00017864464,0.00056653837,0.00020968688,0.00031654374,0.00015383543,0.00050310604,0.002143186],"category_scores_gemma":[0.00036879492,0.00020997877,0.00015516396,0.00015438856,0.0003967983,0.00038640675,0.00023868275,0.00035125704,0.00035798553],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020268348,0.00019464247,0.062859036,0.00029180056,0.00006209991,0.002139629,0.00052812265,0.000096395815,0.92122537,0.00041941475,0.00046561347,0.009691089],"study_design_scores_gemma":[0.0001225979,0.003206908,0.8728986,0.00007707894,0.00013712674,0.016426226,0.0013459547,0.0008433254,0.09327785,0.00049145956,0.011151602,0.000021132162],"about_ca_topic_score_codex":0.0004906041,"about_ca_topic_score_gemma":0.0007897015,"teacher_disagreement_score":0.002143186,"about_ca_system_score_codex":0.00024794578,"about_ca_system_score_gemma":0.00013365533,"threshold_uncertainty_score":0.0071696043},"labels":[],"label_agreement":null},{"id":"W1576945532","doi":"10.1111/j.1462-5822.2010.01488.x","title":"CD34 mediates intestinal inflammation in Salmonella-infected mice","year":2010,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Inflammation; Lamina propria; CD34; Immunology; Chemokine; Haematopoiesis; Proinflammatory cytokine; Stem cell; Microbiology; Cell biology; Epithelium","score_opus":0.005176194371862429,"score_gpt":0.20126566660354914,"score_spread":0.1960894722316867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1576945532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994276,0.0015416037,0.0018455727,0.0002625971,0.000033451066,0.00005229152,0.00027623062,0.00014417939,0.0015682797],"genre_scores_gemma":[0.99409145,0.0010643482,0.0021867442,0.00012489429,0.00001921771,0.000057694022,0.00028327343,0.000026458194,0.0021460457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999775,0.00005476428,0.000015953996,0.00004683951,0.000039231953,0.00006821611],"domain_scores_gemma":[0.9997577,0.000024281855,0.00008668426,0.000015998301,0.000013940053,0.00010142732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022434749,0.0007443169,0.000299471,0.0007011981,0.00020061778,0.00035103277,0.00019983524,0.00059656927,0.0014591536],"category_scores_gemma":[0.00017599008,0.00032886348,0.0002249395,0.00017889812,0.0004186001,0.00026799386,0.00037386618,0.0010660391,0.0004196539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004274691,0.000100508754,0.00027054132,0.00005362563,0.0000038177773,0.00016607718,0.000029732271,0.00006076841,0.99735934,0.00015729165,0.000055733817,0.0013151732],"study_design_scores_gemma":[0.00035060357,0.004579779,0.030930068,0.00009124444,0.00008797112,0.0025705462,0.00019639694,0.0043929326,0.95039874,0.0006610721,0.0057145865,0.000026108282],"about_ca_topic_score_codex":0.00025643932,"about_ca_topic_score_gemma":0.0003547954,"teacher_disagreement_score":0.0014591536,"about_ca_system_score_codex":0.0003161616,"about_ca_system_score_gemma":0.00017061587,"threshold_uncertainty_score":0.0048813224},"labels":[],"label_agreement":null},{"id":"W1580237032","doi":"10.25011/cim.v30i2.979","title":"Human newborn polymorphonuclear neutrophils exhibit decreased levels of MyD88 and attenuated p38 phosphorylation in response to lipopolysaccharide","year":2007,"lang":"en","type":"article","venue":"Clinical and investigative medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Technical University of Nova Scotia; The Audio Recording Academy; Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research; IWK Health Centre; Johns Hopkins University","keywords":"Degranulation; Lipopolysaccharide; p38 mitogen-activated protein kinases; Immunology; Phosphorylation; Receptor; Granulocyte; Molecular biology; Biology; Chemistry; Endocrinology; Protein kinase A; Cell biology; Biochemistry","score_opus":0.08502292792916501,"score_gpt":0.33185011857045754,"score_spread":0.24682719064129255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1580237032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948927,0.0029257555,0.0012029805,0.00007807169,0.000022132463,0.00003991347,0.00031535287,0.000034715078,0.0004882839],"genre_scores_gemma":[0.9964923,0.0010614368,0.0008759018,0.00006722263,0.000014990301,0.000072672374,0.00045947375,0.000005717144,0.0009503341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998276,0.00003367886,0.000021561666,0.000034040455,0.00005072013,0.000032222863],"domain_scores_gemma":[0.99983656,0.000015887745,0.00006514112,0.00001741722,0.000019990071,0.000044878812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020118478,0.00035026774,0.00031883162,0.0002259571,0.00013384753,0.00018373394,0.00014695484,0.0002539338,0.002028833],"category_scores_gemma":[0.0003191814,0.000105920524,0.0001510356,0.00011042317,0.00014932579,0.00015821203,0.0002634294,0.0002773574,0.0003856338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009306868,0.00005946845,0.006482334,0.00014663089,0.000012079767,0.00090558006,0.00010827185,0.000031485954,0.98552585,0.00006227529,0.0001407192,0.0055944906],"study_design_scores_gemma":[0.000075048454,0.0030108045,0.3524347,0.0000757288,0.00008517902,0.012782417,0.00037546115,0.00066135376,0.62439317,0.00018329684,0.005902956,0.00001993124],"about_ca_topic_score_codex":0.0003055883,"about_ca_topic_score_gemma":0.00024242923,"teacher_disagreement_score":0.002028833,"about_ca_system_score_codex":0.00017910087,"about_ca_system_score_gemma":0.00011304903,"threshold_uncertainty_score":0.0067870617},"labels":[],"label_agreement":null},{"id":"W1580651257","doi":"10.18433/j3rp46","title":"Effects of Ketamine on Pulmonary Inflammatory Responses and Survival in Rats Exposed to Polymicrobial Sepsis","year":2007,"lang":"en","type":"article","venue":"Journal of Pharmacy & Pharmaceutical Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Sepsis; Medicine; Inflammatory response; Ketamine; Inflammation; Immunology; Pharmacology; Anesthesia","score_opus":0.03169933841822914,"score_gpt":0.34918467227235517,"score_spread":0.31748533385412603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1580651257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99650973,0.0024003952,0.00040392886,0.00012859992,0.000045170334,0.000040614064,0.00009790804,0.000032409735,0.0003412881],"genre_scores_gemma":[0.9951492,0.0027354844,0.00095627777,0.00013133661,0.00004839453,0.00011392,0.00017839427,0.000006535274,0.00068041513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998697,0.000029349076,0.000012050718,0.000018284534,0.000027561362,0.00004301796],"domain_scores_gemma":[0.9996971,0.000024086628,0.00013765103,0.000024071425,0.000026765358,0.00009034834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020465048,0.0005567757,0.0005619287,0.00016035548,0.00015657947,0.00019821897,0.00019958674,0.00032544858,0.0008375942],"category_scores_gemma":[0.0002939297,0.00014302797,0.00022955136,0.00010541851,0.00043359204,0.00037798999,0.0001981738,0.00081271504,0.00015343199],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.039001245,0.002961509,0.0053001414,0.00047725296,0.00009295617,0.0003712613,0.00012610549,0.00038706517,0.922233,0.00015286265,0.00035557852,0.028541086],"study_design_scores_gemma":[0.0025005306,0.13843879,0.07074601,0.00016651241,0.00031447707,0.0014545379,0.00049016386,0.001928742,0.7794671,0.00029549038,0.0041386224,0.000058977872],"about_ca_topic_score_codex":0.00018891848,"about_ca_topic_score_gemma":0.00034103225,"teacher_disagreement_score":0.0008375942,"about_ca_system_score_codex":0.00014152452,"about_ca_system_score_gemma":0.0002985189,"threshold_uncertainty_score":0.0028020144},"labels":[],"label_agreement":null},{"id":"W1581008394","doi":"10.1111/j.1600-0897.2010.00945.x","title":"Induction of Innate Immune Responses in the Female Genital Tract: Friend or Foe of HIV‐1 Infection?","year":2011,"lang":"en","type":"review","venue":"American Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Immunology; Biology; Microbicides for sexually transmitted diseases; Innate lymphoid cell; Immunity; Immune system; Interferon; Intrinsic immunity; Pattern recognition receptor; Virology; Medicine; Population","score_opus":0.037962723099401734,"score_gpt":0.3144288936768154,"score_spread":0.2764661705774137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1581008394","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015340745,0.9984187,0.00008649413,0.0004120315,0.0002766854,0.000001985753,0.000005700001,0.000004438065,0.0006405415],"genre_scores_gemma":[0.0007967427,0.99784565,0.00010580134,0.0002568736,0.00034828545,0.0000037761974,0.00000973798,0.000001035759,0.0006320682],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998878,0.000026334399,0.0000143162215,0.000020133022,0.000038428378,0.000012996861],"domain_scores_gemma":[0.99985194,0.000058576352,0.000020756179,0.0000058127794,0.000041430787,0.000021435628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003815379,0.0005772554,0.001149726,0.00088282843,0.0002165992,0.0007578957,0.00066874345,0.0011393484,0.0017582823],"category_scores_gemma":[0.0003899827,0.0002091673,0.00025126344,0.00081215805,0.0006029742,0.0013057137,0.00039124207,0.001473155,0.0018766196],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010281915,0.000052377985,0.0003280525,0.008546494,0.000042466487,0.00044233797,0.000093680945,0.00013253331,0.0036380491,0.0033870444,0.030593213,0.952641],"study_design_scores_gemma":[0.000027256827,0.00016329021,0.0018944064,0.0029171072,0.00005632088,0.00455498,0.00016818817,0.0000770804,0.0011903392,0.002708777,0.98621964,0.000022571376],"about_ca_topic_score_codex":0.0005234837,"about_ca_topic_score_gemma":0.0008574647,"teacher_disagreement_score":0.0017582823,"about_ca_system_score_codex":0.00042270488,"about_ca_system_score_gemma":0.00056306424,"threshold_uncertainty_score":0.0058820248},"labels":[],"label_agreement":null},{"id":"W1581135407","doi":"10.1126/science.aaa4921","title":"Cytosolic detection of the bacterial metabolite HBP activates TIFA-dependent innate immunity","year":2015,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":158,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Immune system; Biology; Pathogen-associated molecular pattern; Immunity; Lipopolysaccharide; Acquired immune system; Bacteria; Cytosol; Pathogen; Microbiology; Cell biology; Receptor; Pattern recognition receptor; Immunology; Biochemistry; Enzyme","score_opus":0.017011147914446422,"score_gpt":0.24366222990597913,"score_spread":0.22665108199153272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1581135407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98969203,0.0017117915,0.0051693846,0.00018416984,0.000044970096,0.000030342459,0.00034992586,0.00009248073,0.0027248967],"genre_scores_gemma":[0.9955872,0.0005786531,0.0020380775,0.0000802046,0.00001589158,0.00001941568,0.0003702549,0.0000072458856,0.0013030175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998435,0.000023492374,0.000006637156,0.000032197266,0.000054873275,0.000039362738],"domain_scores_gemma":[0.9999176,0.000017569131,0.000022680426,0.000010552559,0.000009043961,0.000022560052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012697873,0.0004000358,0.00019619106,0.00018558056,0.00015463901,0.00029022119,0.00012908268,0.00024587367,0.001479702],"category_scores_gemma":[0.000100980855,0.00010527847,0.00024073098,0.00010889442,0.00023997133,0.00018736119,0.0002967389,0.0005280066,0.00042098394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046332454,0.0000065955496,0.000073195806,0.000011486772,0.0000010602126,0.000023144928,0.0000028990808,0.000010712569,0.99941933,0.000038332975,0.000010192266,0.00035678505],"study_design_scores_gemma":[0.000009598867,0.00012825236,0.004008302,0.0000028746008,0.000004553719,0.00020618117,0.00001549939,0.00047158735,0.9942783,0.000055308305,0.00081687665,0.0000027289673],"about_ca_topic_score_codex":0.00020326198,"about_ca_topic_score_gemma":0.00029770803,"teacher_disagreement_score":0.001479702,"about_ca_system_score_codex":0.00027051452,"about_ca_system_score_gemma":0.00017296165,"threshold_uncertainty_score":0.0049501657},"labels":[],"label_agreement":null},{"id":"W1581197340","doi":"10.4049/jimmunol.177.11.8202","title":"<i>IRAK-4</i> Mutation (Q293X): Rapid Detection and Characterization of Defective Post-Transcriptional TLR/IL-1R Responses in Human Myeloid and Non-Myeloid Cells","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Child and Family Research Institute","funders":"Wellcome Trust","keywords":"Innate immune system; Biology; Mutation; Signal transduction; Myeloid; Cell biology; Proinflammatory cytokine; Immunology; Immune system; Genetics; Gene; Inflammation","score_opus":0.004424478117310265,"score_gpt":0.20015676402662236,"score_spread":0.1957322859093121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1581197340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873776,0.00030282344,0.009455642,0.00031183538,0.00006406253,0.000073677096,0.0009965713,0.00025640044,0.001161508],"genre_scores_gemma":[0.99068135,0.0002040542,0.0062600826,0.00008236771,0.000022195622,0.00006540114,0.0012298963,0.00012459104,0.0013301071],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997466,0.000050961444,0.00003891853,0.00005451953,0.00007831878,0.000030636165],"domain_scores_gemma":[0.9996008,0.00014470458,0.00009939331,0.00007395687,0.000030176187,0.000051052364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026775914,0.0004584171,0.00028236877,0.00031411767,0.00024030168,0.00040467217,0.00040463114,0.0005316424,0.0024506103],"category_scores_gemma":[0.00058132154,0.00021161178,0.00031575133,0.00012286846,0.0005359629,0.00018486388,0.00033490412,0.00070000126,0.0015190033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010712419,0.000044767683,0.00067086716,0.000015274405,0.000007613362,0.00070566643,0.000018970188,0.00007695385,0.99678636,0.00016608136,0.0001117516,0.0012885227],"study_design_scores_gemma":[0.00007672162,0.00043093835,0.0067253164,0.0000059951685,0.000027389116,0.0144357355,0.000045750967,0.0017501615,0.9730811,0.00024108203,0.0031622543,0.000017647219],"about_ca_topic_score_codex":0.0003300772,"about_ca_topic_score_gemma":0.00021883528,"teacher_disagreement_score":0.0024506103,"about_ca_system_score_codex":0.00018812019,"about_ca_system_score_gemma":0.00015762732,"threshold_uncertainty_score":0.008198142},"labels":[],"label_agreement":null},{"id":"W1582241183","doi":"10.4049/jimmunol.180.5.3478","title":"Lipoteichoic Acid-Induced Lung Inflammation Depends on TLR2 and the Concerted Action of TLR4 and the Platelet-Activating Factor Receptor","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lipoteichoic acid; TLR2; TLR4; Platelet-activating factor receptor; Inflammation; In vivo; Receptor; CD14; Chemokine; Toll-like receptor; Immunology; Tumor necrosis factor alpha; Biology; Chemistry; Innate immune system; Biochemistry; Bacteria; Antagonist","score_opus":0.02113158570575062,"score_gpt":0.24818264910490162,"score_spread":0.227051063399151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1582241183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99350655,0.0019409347,0.0028645296,0.00011763598,0.000033722758,0.000053587777,0.00021057055,0.000085824744,0.0011866183],"genre_scores_gemma":[0.9898061,0.0011768257,0.0033521126,0.00010448075,0.00003264609,0.00013872613,0.00051062065,0.000027449112,0.004850954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99957603,0.00011328709,0.000036729372,0.000064592765,0.00008079949,0.0001285828],"domain_scores_gemma":[0.9997757,0.00001918588,0.00007676628,0.000027985845,0.000019780598,0.00008064256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003070485,0.0008407884,0.00040133428,0.00033509542,0.00018567948,0.00042395727,0.00019274947,0.0005517903,0.0017238363],"category_scores_gemma":[0.00015478831,0.00031257202,0.00045513274,0.00010994291,0.00040063876,0.00033891207,0.00036449626,0.00087204267,0.0006278041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003492736,0.000042048014,0.00017208622,0.000027432414,0.000004116772,0.000072689116,0.0000068282525,0.000026975582,0.9988238,0.000043006992,0.000012066147,0.00041958046],"study_design_scores_gemma":[0.000099408084,0.001478917,0.015673114,0.000019028064,0.000050211893,0.00084369,0.00006903707,0.0013836693,0.97885966,0.0001540629,0.0013572723,0.0000119623655],"about_ca_topic_score_codex":0.00028554324,"about_ca_topic_score_gemma":0.00027184212,"teacher_disagreement_score":0.0017238363,"about_ca_system_score_codex":0.0003354982,"about_ca_system_score_gemma":0.00024759097,"threshold_uncertainty_score":0.0057667494},"labels":[],"label_agreement":null},{"id":"W1584655997","doi":"10.1186/ar1397","title":"Differential modulation of cysteinyl leukotriene receptor 1 and 2 expression by distinct Toll-like receptor agonists in monocyte-derived dendritic cells","year":2004,"lang":"en","type":"article","venue":"Arthritis Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Arthritis Network; School of Medicine, University of California, San Diego; Menzies Institute for Medical Research; National Cancer Institute; Arthritis Society; University of North Carolina at Chapel Hill; Genentech; National Institutes of Health; Biogen; Lupus Research Institute; Pfizer; Natural Sciences and Engineering Research Council of Canada; Dutch Arthritis Association; Oesterreichische Nationalbank; Deutsche Forschungsgemeinschaft; Nuffield Foundation; Physiotherapy Foundation of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Lupus Research Alliance; Wellcome Trust; Newcastle University; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Austrian Science Fund; Arthritis Foundation","keywords":"Materials science","score_opus":0.01806024016613376,"score_gpt":0.2753277802520518,"score_spread":0.257267540085918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1584655997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978308,0.00088064204,0.0006055893,0.000029917337,0.00001477727,0.00001789421,0.00018347961,0.000011631046,0.0004252955],"genre_scores_gemma":[0.99717355,0.00079216535,0.0007155662,0.000060416878,0.000012508386,0.000045968394,0.00033007222,0.000005905383,0.00086389936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997886,0.00005922482,0.000026801397,0.000028119544,0.000028739969,0.000068501344],"domain_scores_gemma":[0.9999391,0.00001560898,0.0000093312565,0.000008919492,0.000008763388,0.00001829791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017709703,0.00014871194,0.00021706932,0.0001122325,0.00007319088,0.00031004747,0.00007860082,0.00018754975,0.00069431245],"category_scores_gemma":[0.00020684312,0.0001170041,0.00020970307,0.00012889953,0.00011192278,0.00011360946,0.00009445352,0.000277072,0.00023323525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068816583,0.000035068333,0.0006187173,0.000048160597,0.000007274415,0.00008596115,0.00003097353,0.000054410237,0.9966127,0.00005966377,0.000039345265,0.0017195281],"study_design_scores_gemma":[0.000120349585,0.0011987936,0.019974673,0.000012722031,0.00008653894,0.0007136457,0.00012683126,0.0010366959,0.9730801,0.00008777707,0.0035493195,0.000012622185],"about_ca_topic_score_codex":0.000281445,"about_ca_topic_score_gemma":0.00033448165,"teacher_disagreement_score":0.00069431245,"about_ca_system_score_codex":0.00017084916,"about_ca_system_score_gemma":0.00014618602,"threshold_uncertainty_score":0.0023226738},"labels":[],"label_agreement":null},{"id":"W1587826844","doi":"10.4049/jimmunol.176.2.1185","title":"Abrupt Expression of TLR4 in TLR4-Deficient Macrophages Imposes a Selective Disadvantage: Genetic Evidence for TLR4-Dependent Responses to Endogenous, Nonmicrobial Stimuli","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"TLR4; Biology; Transfection; Cell culture; In vitro; Endogeny; Cell biology; Gene; Molecular biology; Signal transduction; Genetics; Biochemistry","score_opus":0.026654152977937537,"score_gpt":0.29474790529549905,"score_spread":0.2680937523175615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1587826844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952897,0.0004930178,0.0032624002,0.00010401617,0.000020926884,0.000019454706,0.00026142533,0.000054508037,0.0004946232],"genre_scores_gemma":[0.9922019,0.0005357253,0.004707132,0.00010177567,0.000020911539,0.00006332075,0.0006607481,0.000062803,0.001645661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99952745,0.0000887954,0.00007138825,0.000070756476,0.00013047911,0.00011119439],"domain_scores_gemma":[0.9994735,0.000107799766,0.00012829281,0.00009994923,0.00007043194,0.00012007745],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004123857,0.0004109788,0.00033555835,0.00040994558,0.00030178713,0.00039914896,0.00049474236,0.00051915616,0.0017975193],"category_scores_gemma":[0.00035763966,0.0002611689,0.00042306026,0.00018953209,0.00038206181,0.00030960055,0.0005169501,0.0009478005,0.00075008697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008485643,0.00001300937,0.0002723482,0.0000151945915,0.0000024928113,0.000055588625,0.000008814989,0.0000075837197,0.9993167,0.000039596227,0.000008131776,0.00017580936],"study_design_scores_gemma":[0.000017829778,0.00027372965,0.0034995847,0.0000064667374,0.00001584353,0.00081240275,0.000044462682,0.00039746147,0.9941658,0.00005529514,0.0007062381,0.000004925474],"about_ca_topic_score_codex":0.00036113118,"about_ca_topic_score_gemma":0.00043442877,"teacher_disagreement_score":0.0017975193,"about_ca_system_score_codex":0.00021764691,"about_ca_system_score_gemma":0.00022011409,"threshold_uncertainty_score":0.006013334},"labels":[],"label_agreement":null},{"id":"W1590843514","doi":"10.1159/000081687","title":"Fundamentals of Endotoxin Structure and Function","year":2004,"lang":"en","type":"review","venue":"Contributions to microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Structure function; Physics","score_opus":0.011054064527887727,"score_gpt":0.2886731834835349,"score_spread":0.27761911895564717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1590843514","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000115104536,0.99512047,0.0013198946,0.0006897768,0.0014412086,0.0000064141395,0.000014005761,0.000015231496,0.0012779128],"genre_scores_gemma":[0.0009381739,0.99527586,0.0010193042,0.00039055088,0.001009475,0.000012969835,0.000027875938,0.0000031199017,0.0013226771],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997392,0.000047175265,0.000043103755,0.00004306119,0.00009547303,0.000031896034],"domain_scores_gemma":[0.99968207,0.00013152532,0.000042812106,0.00001936405,0.0000844069,0.00003985104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009894619,0.0016541154,0.002009315,0.0015534748,0.00047765003,0.0016472883,0.0021794725,0.002047709,0.002509251],"category_scores_gemma":[0.0009601749,0.00052058423,0.00046648883,0.0022232714,0.002243139,0.0027140663,0.0013077765,0.0039161104,0.0025439758],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014158117,0.00009942004,0.00021382135,0.009454722,0.00006230341,0.00050485303,0.000120702774,0.0013280103,0.008580968,0.027924694,0.051908918,0.89965993],"study_design_scores_gemma":[0.000014600449,0.0000419521,0.00020874853,0.0011068813,0.000032412783,0.00085191533,0.000049872924,0.00015250871,0.0009510371,0.0087791495,0.98779404,0.000016731836],"about_ca_topic_score_codex":0.00094677246,"about_ca_topic_score_gemma":0.0010276806,"teacher_disagreement_score":0.002509251,"about_ca_system_score_codex":0.0012137238,"about_ca_system_score_gemma":0.0016230651,"threshold_uncertainty_score":0.008806288},"labels":[],"label_agreement":null},{"id":"W1591119539","doi":"10.4049/jimmunol.174.7.4210","title":"Cross-Talk between CD14 and Complement Receptor 3 Promotes Phagocytosis of Mycobacteria: Regulation by Phosphatidylinositol 3-Kinase and Cytohesin-1","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Vancouver Coastal Health Research Institute; University of British Columbia; Vancouver Coastal Health","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; British Columbia Lung Association","keywords":"Cell biology; TLR2; Internalization; Phagocytosis; Biology; CD14; PI3K/AKT/mTOR pathway; Phosphatidylinositol; Signal transduction; Receptor; Molecular biology; Flow cytometry; TLR4; Biochemistry","score_opus":0.010148334533123995,"score_gpt":0.24891178527456587,"score_spread":0.23876345074144187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1591119539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99583983,0.0018334732,0.0010892077,0.00015512257,0.00003139501,0.000023766048,0.00013682248,0.000027835002,0.0008625958],"genre_scores_gemma":[0.9957333,0.00085074146,0.0011620297,0.00012566352,0.000018778162,0.000059380196,0.0002492263,0.000006859062,0.001794011],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978715,0.000039644725,0.000018675815,0.000032288095,0.00004187074,0.000080435326],"domain_scores_gemma":[0.999905,0.000013637672,0.000028386507,0.000008335921,0.000016028362,0.000028649607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016637999,0.00029130117,0.0002234398,0.00018103932,0.00018615583,0.00029376187,0.00019878508,0.00039637295,0.00094814604],"category_scores_gemma":[0.00014266373,0.00016691248,0.00037493874,0.00014000619,0.0001965515,0.0002423576,0.00030398575,0.0005636009,0.00037641285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036752108,0.000038322658,0.000302873,0.00004236886,0.0000048059064,0.00009308593,0.000017309176,0.00003209199,0.99822277,0.000095295945,0.000039316703,0.00074430014],"study_design_scores_gemma":[0.00007361631,0.0002749819,0.029698636,0.000011597681,0.000025774121,0.00030095136,0.00006951796,0.0028759614,0.96510535,0.00011573853,0.0014402939,0.000007577093],"about_ca_topic_score_codex":0.00055229256,"about_ca_topic_score_gemma":0.00091413665,"teacher_disagreement_score":0.00094814604,"about_ca_system_score_codex":0.0004655176,"about_ca_system_score_gemma":0.0002827219,"threshold_uncertainty_score":0.0033775568},"labels":[],"label_agreement":null},{"id":"W1594707968","doi":"10.4049/jimmunol.0902606","title":"Hypochlorous Acid: A Natural Adjuvant That Facilitates Antigen Processing, Cross-Priming, and the Induction of Adaptive Immunity","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":323,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"European Regional Development Fund; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Medical Research Council; Fundacja na rzecz Nauki Polskiej; European Commission; Uniwersytet Jagielloński Collegium Medicum","keywords":"Hypochlorous acid; Innate immune system; Chemistry; Scavenger receptor; Acquired immune system; Adjuvant; Cell biology; Receptor; MHC class I; Major histocompatibility complex; Immune system; Biochemistry; Biology; Immunology; Lipoprotein","score_opus":0.0162831281006464,"score_gpt":0.25299968289173674,"score_spread":0.23671655479109036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1594707968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95913243,0.021523293,0.012963107,0.001142058,0.00025752498,0.00016972667,0.00020103824,0.00029458894,0.004316283],"genre_scores_gemma":[0.9778236,0.005926915,0.010898484,0.00037479438,0.0001888741,0.00004836913,0.00028043194,0.000033126995,0.0044254097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984527,0.00003591511,0.000010120945,0.000021695503,0.000046470424,0.000040509658],"domain_scores_gemma":[0.9999194,0.000009059948,0.000020016796,0.0000074217987,0.000017548116,0.000026516253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030391014,0.0004693318,0.00020638097,0.0002750401,0.0001472014,0.00036044963,0.00023455029,0.00053182896,0.0011121967],"category_scores_gemma":[0.000140592,0.00014259003,0.00017913332,0.00009126125,0.00026931168,0.00039557874,0.00031518558,0.00044667607,0.00045840512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000924941,0.00002295524,0.00007172169,0.00006145719,0.000001833564,0.000031838663,0.0000047123717,0.000042304702,0.9976688,0.00010252722,0.000058385885,0.0018409328],"study_design_scores_gemma":[0.000033037497,0.000917273,0.0011286137,0.000007314023,0.000013286161,0.0004834187,0.000008651245,0.00051234104,0.9914262,0.00011486307,0.005348761,0.0000062943695],"about_ca_topic_score_codex":0.00023173678,"about_ca_topic_score_gemma":0.00041905046,"teacher_disagreement_score":0.0011121967,"about_ca_system_score_codex":0.0003190673,"about_ca_system_score_gemma":0.00042459104,"threshold_uncertainty_score":0.0037206411},"labels":[],"label_agreement":null},{"id":"W159506492","doi":"10.4049/jimmunol.182.supp.94.7","title":"Endoglycan is a CD34-related marker of marginal zone B cells and is upregulated by TLR ligands (94.7)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Marginal zone; Downregulation and upregulation; CD34; Cell biology; CD38; Spleen; Haematopoiesis; CD40; Molecular biology; Splenocyte; Immunology; B cell; Antibody; Cytotoxic T cell; Stem cell; In vitro","score_opus":0.003895105469186587,"score_gpt":0.19882639788992962,"score_spread":0.19493129242074303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W159506492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914336,0.0017807592,0.0026425421,0.00009877848,0.000025748894,0.000034337143,0.0007424934,0.000103568134,0.0031381021],"genre_scores_gemma":[0.9846197,0.0010325565,0.0045825103,0.00008105951,0.000029893643,0.00007174033,0.0014670893,0.000035146113,0.00808035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999848,0.000022397235,0.000007816959,0.000026491105,0.000041218165,0.00005397639],"domain_scores_gemma":[0.9999155,0.00000981076,0.000018759114,0.0000060031257,0.000016434225,0.000033522905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008444104,0.0002691066,0.00014408142,0.0006076857,0.00016341062,0.00023840189,0.00012775382,0.00023705325,0.0054794773],"category_scores_gemma":[0.00006325332,0.00012898362,0.00022328817,0.0002213807,0.00015038432,0.00012371008,0.0002538832,0.0004553695,0.0009809966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041673888,0.0000052151736,0.00018368084,0.000010898647,0.000001633523,0.000018229548,0.0000044206267,0.0000030010438,0.99923587,0.000017450737,0.000021989978,0.00045584657],"study_design_scores_gemma":[0.00002222442,0.00037460605,0.0663726,0.000021676862,0.000026672586,0.0007394472,0.000103770886,0.00055713125,0.9248951,0.000095801835,0.006783514,0.00000742825],"about_ca_topic_score_codex":0.0005367957,"about_ca_topic_score_gemma":0.00053683436,"teacher_disagreement_score":0.0054794773,"about_ca_system_score_codex":0.00015369232,"about_ca_system_score_gemma":0.000087304135,"threshold_uncertainty_score":0.018330693},"labels":[],"label_agreement":null},{"id":"W1596376754","doi":"10.1111/j.1749-6632.2010.05787.x","title":"Immunomodulators as adjuvants for vaccines and antimicrobial therapy","year":2010,"lang":"en","type":"review","venue":"Annals of the New York Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Adjuvant; Immunogenicity; Immune system; Immunology; Vaccine adjuvant; Vaccination; Medicine; Antigen; Antimicrobial; Biology; Microbiology","score_opus":0.1001396432922481,"score_gpt":0.37516216453570844,"score_spread":0.2750225212434603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1596376754","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014566707,0.99715436,0.00035658228,0.00021422765,0.00044291068,0.000009369196,0.000009037196,0.000009548758,0.0016581755],"genre_scores_gemma":[0.0011716243,0.99482095,0.0008972251,0.00035845136,0.0005626817,0.000025770007,0.000025605064,0.000003376156,0.0021342887],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996731,0.00007355999,0.000044007153,0.00004731465,0.00013424196,0.000027798276],"domain_scores_gemma":[0.9997675,0.00009410332,0.000034720942,0.000013889006,0.00005982205,0.000030072411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008583561,0.001442484,0.0016337803,0.002819773,0.00041582342,0.001107022,0.0010033639,0.0018161754,0.0034900284],"category_scores_gemma":[0.0005307811,0.00036984004,0.00047105242,0.0018751606,0.00092280994,0.0021304514,0.0008035256,0.0028080228,0.0048806556],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093866955,0.00016870725,0.0001535564,0.009220231,0.00006277642,0.00046309206,0.00009890415,0.00050594535,0.013293039,0.015462429,0.03631733,0.92416024],"study_design_scores_gemma":[0.00002164459,0.000081155486,0.00024620024,0.0011090793,0.000025978312,0.0013888623,0.000029412196,0.00007349765,0.0016870727,0.0027240675,0.9926004,0.000012561356],"about_ca_topic_score_codex":0.00037939125,"about_ca_topic_score_gemma":0.00075074134,"teacher_disagreement_score":0.0034900284,"about_ca_system_score_codex":0.0007929886,"about_ca_system_score_gemma":0.00070257706,"threshold_uncertainty_score":0.011675298},"labels":[],"label_agreement":null},{"id":"W1598301056","doi":"10.1111/j.1751-2980.2011.00486.x","title":"Correlation of the expression of toll‐like receptors in monocyte‐derived dendritic cells with prognosis of chronic severe hepatitis B","year":2011,"lang":"en","type":"article","venue":"Journal of Digestive Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Swine Health Board","keywords":"CD14; Medicine; Pathogenesis; Immunology; Flow cytometry; Hepatitis a virus; Toll-like receptor; White blood cell; Receptor; Internal medicine; Immune system; Virus; Innate immune system","score_opus":0.00909527751883544,"score_gpt":0.20592114376180784,"score_spread":0.1968258662429724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1598301056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992099,0.00042063123,0.00010272869,0.000017525881,0.0000034556783,0.0000048998036,0.00009833159,0.000002519455,0.00013996293],"genre_scores_gemma":[0.99951255,0.00010705535,0.00010852501,0.000011077798,0.000009044298,0.0000066025905,0.00012235879,5.662441e-7,0.00012214648],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988365,0.000030929576,0.000016624468,0.000024624145,0.000020935222,0.00002321038],"domain_scores_gemma":[0.99961346,0.000063438296,0.00017410188,0.000021594826,0.00005861881,0.00006875189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023316698,0.00018097252,0.00015767124,0.00035981621,0.00017173769,0.00022423135,0.00006193115,0.00023834732,0.0010120518],"category_scores_gemma":[0.0005323671,0.000071921415,0.00010321466,0.0002311454,0.00012010967,0.00010877984,0.00017535457,0.0002160145,0.00017880432],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009967014,0.000051370585,0.96958005,0.000044962373,0.000033565546,0.000107070104,0.000060008835,0.00005845661,0.023584336,0.000012292405,0.000079278856,0.005391892],"study_design_scores_gemma":[0.00001621493,0.00028784387,0.99619746,0.000006863385,0.00002197687,0.00049802073,0.00010209736,0.00022472529,0.002354417,0.000026691458,0.0002596208,0.000004163433],"about_ca_topic_score_codex":0.00023005487,"about_ca_topic_score_gemma":0.00025864062,"teacher_disagreement_score":0.0010120518,"about_ca_system_score_codex":0.00008855776,"about_ca_system_score_gemma":0.000090293994,"threshold_uncertainty_score":0.003385663},"labels":[],"label_agreement":null},{"id":"W1599168371","doi":"10.4049/jimmunol.178.4.2171","title":"Bacterial c-di-GMP Is an Immunostimulatory Molecule","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":218,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; University of Toronto","funders":"","keywords":"CD80; Chemokine; Immune system; CD86; Chemistry; Biology; Immunology; Molecular biology; CD40; T cell; Biochemistry; Cytotoxic T cell; In vitro","score_opus":0.010536295755960691,"score_gpt":0.24630740281370345,"score_spread":0.23577110705774276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1599168371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9768604,0.008802317,0.0065019885,0.00032373963,0.00012380861,0.00012703193,0.00089034054,0.00019369854,0.0061766645],"genre_scores_gemma":[0.9893433,0.0019858775,0.0049616313,0.00014144774,0.000023142562,0.00007760601,0.0005971865,0.000011955449,0.0028578846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999175,0.0000140667025,0.000005313638,0.000017716267,0.000026105181,0.000019289531],"domain_scores_gemma":[0.99995136,0.00000781999,0.000014490815,0.000006278662,0.000005961055,0.000014052134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000076860975,0.0003147568,0.00011400948,0.00015582879,0.00012116696,0.00012511696,0.00013686788,0.0002733409,0.0013209664],"category_scores_gemma":[0.00008450113,0.00006555778,0.000106166546,0.000118072334,0.00018149908,0.00008701183,0.00013662536,0.00034859646,0.00044620477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008230532,0.000017118122,0.00012779333,0.00004289715,0.0000017415497,0.000050690593,0.0000031091338,0.000049117378,0.99634117,0.00006843201,0.0000558431,0.0031597952],"study_design_scores_gemma":[0.000019434205,0.00057367474,0.0033786923,0.000010531919,0.000007828128,0.00042961558,0.0000071123004,0.00041597243,0.98786026,0.00005783619,0.00723458,0.0000045697834],"about_ca_topic_score_codex":0.00045684294,"about_ca_topic_score_gemma":0.00049759465,"teacher_disagreement_score":0.0013209664,"about_ca_system_score_codex":0.0002620811,"about_ca_system_score_gemma":0.00019246958,"threshold_uncertainty_score":0.0044190288},"labels":[],"label_agreement":null},{"id":"W1601511168","doi":"10.1186/ar1348","title":"An apoptotic signaling pathway activated by Nod1","year":2004,"lang":"en","type":"article","venue":"Arthritis Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Arthritis Network; School of Medicine, University of California, San Diego; Menzies Institute for Medical Research; National Cancer Institute; Arthritis Society; University of North Carolina at Chapel Hill; Genentech; National Institutes of Health; Biogen; Lupus Research Institute; Pfizer; Natural Sciences and Engineering Research Council of Canada; Dutch Arthritis Association; Oesterreichische Nationalbank; Deutsche Forschungsgemeinschaft; Nuffield Foundation; Physiotherapy Foundation of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Lupus Research Alliance; Wellcome Trust; Newcastle University; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Austrian Science Fund; Arthritis Foundation","keywords":"Business","score_opus":0.0264010904421578,"score_gpt":0.311609932823864,"score_spread":0.2852088423817062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1601511168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5277407,0.336622,0.049004856,0.0070187305,0.0070627783,0.0008021025,0.009068329,0.0015066864,0.061173774],"genre_scores_gemma":[0.8950682,0.050668504,0.011647167,0.0024639384,0.0013034017,0.00071508746,0.007911078,0.00007086968,0.03015172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992048,0.00020838763,0.000068960006,0.00017755762,0.00016545298,0.00017479766],"domain_scores_gemma":[0.9997037,0.000039948438,0.00008999738,0.000030060917,0.00007375866,0.00006251762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006895265,0.0006949748,0.0005834211,0.00072041265,0.00037868734,0.0008915854,0.00037886648,0.0005273701,0.011273937],"category_scores_gemma":[0.0003795242,0.00015948417,0.00075485907,0.00030554287,0.0003889548,0.00057723915,0.00085601694,0.0012933846,0.0022912463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00187285,0.0005048357,0.004113068,0.005261216,0.00021782836,0.0018130486,0.00026706685,0.00043590626,0.9030867,0.0055387146,0.009039366,0.06784949],"study_design_scores_gemma":[0.0004959508,0.003101325,0.0509823,0.001239607,0.00031917085,0.008806756,0.00076764676,0.0033408224,0.63570833,0.0065851198,0.28854853,0.00010445632],"about_ca_topic_score_codex":0.00019610485,"about_ca_topic_score_gemma":0.00018434654,"teacher_disagreement_score":0.011273937,"about_ca_system_score_codex":0.00046574997,"about_ca_system_score_gemma":0.00038453762,"threshold_uncertainty_score":0.037715137},"labels":[],"label_agreement":null},{"id":"W1603446342","doi":"10.4049/jimmunol.166.5.3451","title":"Intranasal Immunization with CpG Oligodeoxynucleotides as an Adjuvant Dramatically Increases IgA and Protection Against Herpes Simplex Virus-2 in the Genital Tract","year":2001,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":219,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; McMaster University; Ottawa Hospital; McMaster University Medical Centre","funders":"","keywords":"CpG Oligodeoxynucleotide; Herpes simplex virus; Adjuvant; Nasal administration; Immunology; Immune system; Virology; CTL*; Immunization; Biology; CpG site; Virus; Medicine; CD8","score_opus":0.009609360313638009,"score_gpt":0.22804162473250733,"score_spread":0.21843226441886932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1603446342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99687886,0.0009332681,0.00097329624,0.000098316865,0.000038534392,0.000026625128,0.00012621957,0.00006010683,0.00086493115],"genre_scores_gemma":[0.9949687,0.0008074528,0.0015422393,0.00010347062,0.000024030662,0.000025170037,0.00025567203,0.000015149445,0.002258065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999915,0.000012144163,0.000005595008,0.000020370335,0.000021063592,0.000025793823],"domain_scores_gemma":[0.9999287,0.0000100279385,0.000016953363,0.000006643029,0.000007312142,0.000030369963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012969587,0.00036704712,0.00020445522,0.0001814347,0.000063339634,0.0001500131,0.0001008323,0.00024765232,0.0010164134],"category_scores_gemma":[0.000109879074,0.000117792435,0.0001414668,0.000057632522,0.00016783124,0.0001044296,0.00011587038,0.000526091,0.00021085911],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053482763,0.000027459037,0.000121500336,0.000017466562,0.0000017837807,0.00001234851,0.000005244023,0.000014372989,0.998923,0.000012588603,0.000013817097,0.0007970151],"study_design_scores_gemma":[0.00004323189,0.0023173634,0.00926276,0.000015655149,0.000025600639,0.00029011333,0.00003008081,0.00047590942,0.9854865,0.000040863382,0.0020074656,0.000004454345],"about_ca_topic_score_codex":0.0004206432,"about_ca_topic_score_gemma":0.00076348905,"teacher_disagreement_score":0.0010164134,"about_ca_system_score_codex":0.00016623236,"about_ca_system_score_gemma":0.00019548467,"threshold_uncertainty_score":0.0034002066},"labels":[],"label_agreement":null},{"id":"W1604720580","doi":"10.3390/molecules20058316","title":"Structure Based Modeling of Small Molecules Binding to the TLR7 by Atomistic Level Simulations","year":2015,"lang":"en","type":"article","venue":"Molecules","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Li Ka Shing Institute of Virology, University of Alberta; Natural Sciences and Engineering Research Council of Canada; Politecnico di Torino","keywords":"TLR7; In silico; Receptor; Docking (animal); Computational biology; Molecular dynamics; Chemistry; Mechanism (biology); Biophysics; Small molecule; Molecular model; Toll-like receptor; Biology; Biochemistry; Innate immune system; Gene; Medicine; Computational chemistry; Physics","score_opus":0.04064499910256681,"score_gpt":0.25180934991668685,"score_spread":0.21116435081412005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1604720580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8460449,0.0011805166,0.09019616,0.0012805931,0.00024387486,0.000365211,0.0035863477,0.0007491696,0.056353178],"genre_scores_gemma":[0.96698004,0.0006642471,0.024782715,0.00020924784,0.000041376996,0.0006977583,0.0016628806,0.00012732159,0.0048344824],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99977154,0.00006941393,0.0000088415945,0.000022275133,0.000064170774,0.000063836276],"domain_scores_gemma":[0.999295,0.00041533043,0.000043264285,0.000041995216,0.0001297407,0.00007467703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038988882,0.00086067844,0.0014877709,0.0007143673,0.0010935393,0.00096348947,0.0016647023,0.0022966953,0.0068644374],"category_scores_gemma":[0.0013905255,0.00062336365,0.0010386806,0.000901762,0.0007725187,0.0005363431,0.0007654889,0.0010054082,0.0005924784],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008773788,0.000052096224,0.00054721977,0.000047367022,0.000025119183,0.00010039866,0.000032189106,0.9946985,0.0008023698,0.0025113206,0.0003235424,0.00077212095],"study_design_scores_gemma":[0.000027551983,0.000019559095,0.00012190033,0.000004769902,0.0000056297645,0.0000059600916,0.000014391415,0.9988405,0.00015452839,0.00051053683,0.00029052404,0.000004184731],"about_ca_topic_score_codex":0.02178257,"about_ca_topic_score_gemma":0.010812955,"teacher_disagreement_score":0.02178257,"about_ca_system_score_codex":0.0013337218,"about_ca_system_score_gemma":0.0019365757,"threshold_uncertainty_score":0.043311596},"labels":[],"label_agreement":null},{"id":"W1608661399","doi":"10.1007/bf03401824","title":"Intranasal Immunization of Mice with CpG DNA Induces Strong Systemic and Mucosal Responses That Are Influenced by Other Mucosal Adjuvants and Antigen Distribution","year":2000,"lang":"en","type":"article","venue":"Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"Medical Research Council","keywords":"Nasal administration; Immunology; Immunization; CpG site; CpG Oligodeoxynucleotide; Antigen; Molecular medicine; TLR9; Medicine; Biology; DNA methylation; Gene; Cell cycle; Genetics","score_opus":0.0060516630690488045,"score_gpt":0.2202095756359267,"score_spread":0.21415791256687788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1608661399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941765,0.0010428198,0.0027941978,0.000103553815,0.000050209823,0.00007423737,0.00023995263,0.00015141547,0.0013670694],"genre_scores_gemma":[0.99191827,0.0009878455,0.0037405512,0.0001170292,0.000040004867,0.000093215676,0.0004207338,0.000033560653,0.002648852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998229,0.000029412146,0.000014048882,0.000042285443,0.000041729836,0.0000496881],"domain_scores_gemma":[0.99978966,0.000027915332,0.00006923266,0.000019671406,0.000021898419,0.00007156665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002568428,0.000782763,0.00028030825,0.00032492832,0.000086034284,0.00019131106,0.00012146264,0.00034087378,0.0013009469],"category_scores_gemma":[0.00013068254,0.00015000538,0.00019205546,0.000100254256,0.0003482601,0.00017601425,0.00016304114,0.0008206528,0.0003358888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012539928,0.00006137237,0.00016172318,0.000034318273,0.0000024220333,0.00001338497,0.000005394902,0.000027526321,0.9988356,0.000017530834,0.0000131984725,0.00070226],"study_design_scores_gemma":[0.000043008702,0.0020830315,0.0022117977,0.000013655924,0.00001914437,0.00013492843,0.000012653293,0.00036181769,0.99431396,0.000026302907,0.0007764059,0.00000329676],"about_ca_topic_score_codex":0.00022982423,"about_ca_topic_score_gemma":0.00039220665,"teacher_disagreement_score":0.0013009469,"about_ca_system_score_codex":0.00020806493,"about_ca_system_score_gemma":0.00025022303,"threshold_uncertainty_score":0.0043521523},"labels":[],"label_agreement":null},{"id":"W1614434271","doi":"10.1186/cc3252","title":"Alpha-1-acid glycoprotein reduces hepatic leukocyte recruitment in early sepsis","year":2005,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institutes of Health","keywords":"Medicine; Family medicine","score_opus":0.03547367811416156,"score_gpt":0.31441492530244625,"score_spread":0.27894124718828467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1614434271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980994,0.00072169385,0.0006093843,0.00008345668,0.00003258336,0.000028317932,0.00004695271,0.000057149373,0.0003211302],"genre_scores_gemma":[0.9965663,0.0008901177,0.0010056681,0.000089776484,0.00003091478,0.000056393903,0.00016429626,0.000015635622,0.0011809198],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985576,0.00004464225,0.0000108107115,0.0000129914615,0.00003094408,0.000044697717],"domain_scores_gemma":[0.99976856,0.000026462438,0.00006292766,0.000017327005,0.000022169548,0.00010259056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019025816,0.0005738575,0.0006326097,0.00020604808,0.000111884576,0.0002728587,0.00024518356,0.00037620316,0.00074537453],"category_scores_gemma":[0.00029585132,0.00015184685,0.00021262484,0.000116066,0.0002542822,0.00024920685,0.00020309615,0.0010268051,0.00020414163],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038380825,0.00071563607,0.00023290626,0.000074542906,0.000011832614,0.00006963294,0.000026370613,0.000121342084,0.98986405,0.000036324287,0.00009930625,0.004909935],"study_design_scores_gemma":[0.0007096916,0.042545263,0.013492129,0.000033012588,0.00006288709,0.00050209666,0.00009219954,0.0017335266,0.9392662,0.00009539053,0.0014513596,0.000016271051],"about_ca_topic_score_codex":0.0001920747,"about_ca_topic_score_gemma":0.00035238368,"teacher_disagreement_score":0.00074537453,"about_ca_system_score_codex":0.000118720134,"about_ca_system_score_gemma":0.0002631086,"threshold_uncertainty_score":0.0024935603},"labels":[],"label_agreement":null},{"id":"W1622357346","doi":"10.4049/jimmunol.0803576","title":"Early Life Exposure to Lipopolysaccharide Suppresses Experimental Autoimmune Encephalomyelitis by Promoting Tolerogenic Dendritic Cells and Regulatory T Cells","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary; University of Alberta","funders":"","keywords":"Experimental autoimmune encephalomyelitis; Lipopolysaccharide; Immunology; Encephalomyelitis; Dendritic cell; Biology; Cell biology; Medicine; Chemistry; Immune system; Multiple sclerosis","score_opus":0.0056342830171391385,"score_gpt":0.21335311948526875,"score_spread":0.2077188364681296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1622357346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99718446,0.0012811995,0.0007822649,0.00006970749,0.000029793528,0.000018967452,0.00008984597,0.00005311782,0.0004906062],"genre_scores_gemma":[0.99624443,0.0010203156,0.0009558009,0.00008782322,0.000034412606,0.00005889001,0.00023170044,0.000015286732,0.0013514098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983466,0.00004560408,0.000017327244,0.000027583088,0.00002520349,0.000049746297],"domain_scores_gemma":[0.9996911,0.000032634292,0.000079790225,0.000027834907,0.000027944116,0.00014063806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019250171,0.00046901786,0.00034554643,0.00024997455,0.00011116695,0.00025590076,0.0001954241,0.00037728006,0.0007816543],"category_scores_gemma":[0.00022589916,0.000117215604,0.00025684942,0.000090907226,0.00030658342,0.0001811044,0.00023821216,0.0007791704,0.00030739355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011455587,0.00031547103,0.0005489938,0.000069081114,0.0000065349473,0.00011467511,0.000041052695,0.000043099943,0.99447894,0.000045402296,0.000034240773,0.003156954],"study_design_scores_gemma":[0.00029867716,0.014815246,0.045825936,0.00007712827,0.00007509162,0.0008083795,0.00025183542,0.001043359,0.9331385,0.00025000123,0.0033934035,0.000022396172],"about_ca_topic_score_codex":0.000184734,"about_ca_topic_score_gemma":0.00030668135,"teacher_disagreement_score":0.0007816543,"about_ca_system_score_codex":0.00013547724,"about_ca_system_score_gemma":0.0002510934,"threshold_uncertainty_score":0.0026149154},"labels":[],"label_agreement":null},{"id":"W1626946806","doi":"10.1007/978-1-4419-0298-6_23","title":"Innate Immunity of Spondyloarthritis: The Role of Toll-Like Receptors","year":2009,"lang":"en","type":"review","venue":"Advances in experimental medicine and biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; University of Toronto","funders":"","keywords":"Toll; Innate immune system; Immunology; Immunity; Toll-like receptor; Receptor; Medicine; Neuroscience; Biology; Immune system; Internal medicine","score_opus":0.02103703469643333,"score_gpt":0.3457633938924704,"score_spread":0.3247263591960371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1626946806","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007297985,0.9985557,0.00020683094,0.0002458852,0.00037707525,0.0000034164616,0.000011340692,0.000006649527,0.00052017305],"genre_scores_gemma":[0.0004527127,0.99806803,0.00027017825,0.00018583855,0.00045319326,0.0000041291705,0.000025396017,0.0000010675077,0.0005393646],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999793,0.000023898743,0.000026425358,0.000038458933,0.00009628346,0.000021920474],"domain_scores_gemma":[0.9995704,0.00015200037,0.000065269145,0.000013597791,0.000128912,0.000069774396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073194236,0.0011969323,0.0018614474,0.0013499298,0.0002419141,0.0010832616,0.0012510337,0.0012675233,0.003022784],"category_scores_gemma":[0.0006850048,0.00026075836,0.00036879105,0.0019596433,0.0007079412,0.0017160551,0.0008983399,0.002148477,0.002717552],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011444969,0.00005357462,0.00013297102,0.007077167,0.000051780273,0.00017079973,0.000026695512,0.00023734257,0.0032958777,0.0017134398,0.033544686,0.9535812],"study_design_scores_gemma":[0.000039550723,0.00009266767,0.00093076914,0.001972242,0.00008342353,0.0014767924,0.00006004802,0.000107052074,0.0007088171,0.0023664974,0.9921381,0.000023957587],"about_ca_topic_score_codex":0.0007432112,"about_ca_topic_score_gemma":0.0013308687,"teacher_disagreement_score":0.003022784,"about_ca_system_score_codex":0.00061933405,"about_ca_system_score_gemma":0.0012200228,"threshold_uncertainty_score":0.010112226},"labels":[],"label_agreement":null},{"id":"W1628005392","doi":"10.4049/jimmunol.178.5.3170","title":"A Role of Toll-IL-1 Receptor Domain-Containing Adaptor-Inducing IFN-β in the Host Response to <i>Pseudomonas aeruginosa</i> Lung Infection in Mice","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Killam Trusts","keywords":"TRIF; Pseudomonas aeruginosa; Chemokine; Signal transducing adaptor protein; TLR4; Toll-like receptor; Immunology; CXCL1; Cytokine; Biology; Signal transduction; Microbiology; Immune system; Cell biology; Innate immune system; Bacteria","score_opus":0.006590790587675849,"score_gpt":0.2368350086910714,"score_spread":0.23024421810339557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1628005392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98835874,0.003165516,0.004439463,0.0003946437,0.0000448694,0.000062634725,0.00060735573,0.0003051972,0.0026216246],"genre_scores_gemma":[0.9918013,0.0013823498,0.0034740372,0.0002348835,0.000020738826,0.000088143745,0.0005594655,0.00008077224,0.0023583304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971515,0.00006117677,0.000033024873,0.000060243598,0.000056766756,0.00007368849],"domain_scores_gemma":[0.99958247,0.000028548115,0.00017384943,0.000040854462,0.000025430743,0.00014893817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035657454,0.00082546205,0.00035484426,0.00061130215,0.00020438722,0.0005216741,0.000281445,0.000660192,0.0011642611],"category_scores_gemma":[0.00020793265,0.0004362167,0.0004033483,0.00009900968,0.0005493297,0.0004534562,0.00030581566,0.001375086,0.00044029244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005543457,0.000087340864,0.00043132584,0.00004389371,0.000007636229,0.00014316602,0.00002145438,0.00006983418,0.9964222,0.0002737362,0.000046536414,0.0018985155],"study_design_scores_gemma":[0.0003149376,0.0020652574,0.028725704,0.000083023726,0.00011816672,0.0032514513,0.00013749383,0.0021446454,0.95828867,0.00066018506,0.004181174,0.000029307088],"about_ca_topic_score_codex":0.00028435388,"about_ca_topic_score_gemma":0.00026544937,"teacher_disagreement_score":0.0011642611,"about_ca_system_score_codex":0.0003676563,"about_ca_system_score_gemma":0.00032559413,"threshold_uncertainty_score":0.003894806},"labels":[],"label_agreement":null},{"id":"W1628984902","doi":"10.4049/jimmunol.177.11.8154","title":"The Role of TLR2 In Vivo following Challenge with <i>Staphylococcus aureus</i> and Prototypic Ligands","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Institute of Infection and Immunity","funders":"","keywords":"Lipoteichoic acid; TLR2; In vivo; Biology; Peptidoglycan; Microbiology; Staphylococcus aureus; Peritonitis; Immune system; Immunology; In vitro; Innate immune system; Biochemistry; Bacteria; Cell wall","score_opus":0.0030076989477608447,"score_gpt":0.19052551549049584,"score_spread":0.187517816542735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1628984902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941381,0.0010471973,0.00246782,0.00016236588,0.00004154686,0.00003322658,0.0004910519,0.000050143473,0.0015684945],"genre_scores_gemma":[0.99411917,0.0005080492,0.0019762998,0.00018336526,0.000038013426,0.00009061247,0.0007592502,0.000013968764,0.0023112681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995073,0.00013778526,0.00003733653,0.00007431759,0.00007356961,0.00016982417],"domain_scores_gemma":[0.99978024,0.0000362126,0.000059498103,0.000024375046,0.000025917472,0.000073801384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041674273,0.00051971414,0.00037565894,0.00026992682,0.00019080625,0.00047205485,0.00023923456,0.00073235855,0.0016485568],"category_scores_gemma":[0.00021018008,0.0002313886,0.00037227853,0.00011146937,0.0002535767,0.00035398756,0.00025779518,0.00085239526,0.00078311854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048727574,0.000036806312,0.00032810867,0.000028546905,0.0000034555214,0.00003934858,0.0000105276595,0.0000352855,0.9986444,0.00003515092,0.00002693999,0.00032417444],"study_design_scores_gemma":[0.000052556592,0.0019367828,0.01934274,0.000025919328,0.000028032133,0.0007440268,0.00013277323,0.0019529787,0.9745633,0.000107372914,0.0011016104,0.000011987645],"about_ca_topic_score_codex":0.00025821288,"about_ca_topic_score_gemma":0.00037491514,"teacher_disagreement_score":0.0016485568,"about_ca_system_score_codex":0.00030163207,"about_ca_system_score_gemma":0.00017102584,"threshold_uncertainty_score":0.0055149198},"labels":[],"label_agreement":null},{"id":"W1631759172","doi":"10.4049/jimmunol.1302896","title":"NADPH Oxidase Modifies Patterns of MHC Class II–Restricted Epitopic Repertoires through Redox Control of Antigen Processing","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Experimental autoimmune encephalomyelitis; MHC class II; Phagosome; Myelin oligodendrocyte glycoprotein; Cell biology; NADPH oxidase; Proteolysis; T cell; Biology; Antigen-presenting cell; Chemistry; MHC restriction; Dendritic cell; Cathepsin; Antigen presentation; Antigen; Biochemistry; Immunology; Immune system; Phagocytosis; Reactive oxygen species; Enzyme","score_opus":0.008651025899292475,"score_gpt":0.22614219013452505,"score_spread":0.21749116423523257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1631759172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969118,0.00045863708,0.0019476421,0.000029259772,0.000011735869,0.000006312584,0.00007437896,0.00002632095,0.00053394],"genre_scores_gemma":[0.99781346,0.00030846277,0.0010278848,0.000019599413,0.00000558088,0.000005962134,0.000090180256,0.000007716657,0.00072111184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999136,0.000012824597,0.00000471527,0.00002483241,0.000017090473,0.000026970882],"domain_scores_gemma":[0.9999378,0.0000053862773,0.000022176788,0.000008019134,0.0000095638225,0.00001707171],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010713063,0.00023238595,0.000105122184,0.00012679349,0.00007220812,0.0002430284,0.00014674256,0.00014087328,0.00060769735],"category_scores_gemma":[0.00009798749,0.00009530861,0.00011332209,0.00007386688,0.00013473055,0.00015412834,0.000119690994,0.00025357888,0.00012759202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040871015,0.000004499477,0.00031310477,0.000004386629,0.0000016182385,0.000016459062,0.0000039572224,0.000012615811,0.99909055,0.000040604504,0.000006255424,0.0004650686],"study_design_scores_gemma":[0.00001054233,0.00019761245,0.018716883,0.0000035076393,0.000017664395,0.000304186,0.00003646528,0.00074490544,0.978555,0.00013952068,0.0012689354,0.00000486277],"about_ca_topic_score_codex":0.00021911046,"about_ca_topic_score_gemma":0.00035511787,"teacher_disagreement_score":0.00060769735,"about_ca_system_score_codex":0.00012452815,"about_ca_system_score_gemma":0.00009172541,"threshold_uncertainty_score":0.0020329356},"labels":[],"label_agreement":null},{"id":"W1632867508","doi":"10.4049/jimmunol.174.6.3719","title":"The Cytokine IL-1β Activates IFN Response Factor 3 in Human Fetal Astrocytes in Culture","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institute of Mental Health; McGill University","keywords":"IRF3; IRF7; Interferon regulatory factors; CXCL10; CCL5; STAT1; Biology; Chemokine; Signal transduction; SOCS3; STAT2; Cytokine; ISG15; Molecular biology; Cell biology; STAT3; Transcription factor; STAT protein; Immunology; T cell; Gene; IL-2 receptor; Immune system; Biochemistry","score_opus":0.008870750864193155,"score_gpt":0.24930475507160407,"score_spread":0.24043400420741093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1632867508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8675826,0.019089082,0.060530167,0.0010836577,0.0009766298,0.001400728,0.013094152,0.00089119875,0.03535172],"genre_scores_gemma":[0.90716547,0.008902902,0.045682497,0.00070228206,0.00019257455,0.0012234568,0.0127237765,0.00019665797,0.02321028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993604,0.00008027428,0.0000959039,0.0001117754,0.0002735286,0.000078175566],"domain_scores_gemma":[0.99974304,0.000053639294,0.00003386403,0.000054918644,0.00008049156,0.000034145094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004805491,0.00056796765,0.00063151005,0.00046817545,0.00035017493,0.0004899316,0.00042140554,0.00036677587,0.0029519137],"category_scores_gemma":[0.00023498632,0.00026827276,0.0006358781,0.0005582825,0.00025389457,0.00018643025,0.000421951,0.0009080362,0.0025452832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032965047,0.000075929085,0.00024426365,0.00013339563,0.000011284851,0.00030152014,0.00013169575,0.00017703812,0.9944541,0.0001953787,0.00032629535,0.003619389],"study_design_scores_gemma":[0.000115752555,0.00045673962,0.004177292,0.00006872365,0.00007611267,0.0006821437,0.00009060541,0.002056441,0.96138775,0.00025414798,0.0306131,0.000021198708],"about_ca_topic_score_codex":0.0043536075,"about_ca_topic_score_gemma":0.005711388,"teacher_disagreement_score":0.0043536075,"about_ca_system_score_codex":0.0004250801,"about_ca_system_score_gemma":0.0005442366,"threshold_uncertainty_score":0.009875178},"labels":[],"label_agreement":null},{"id":"W1664228137","doi":"10.1111/j.1600-0897.2008.00605.x","title":"ORIGINAL ARTICLE: LPS‐Induced Murine Abortions Require C5 but not C3, and are Prevented by Upregulating Expression of the CD200 Tolerance Signaling Molecule","year":2008,"lang":"en","type":"article","venue":"American Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; McMaster University; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Lipopolysaccharide; Andrology; Abortion; Medicine; Endocrinology; Internal medicine; Pregnancy; Immunology; Transgene; Biology; Gene; Biochemistry","score_opus":0.009070047462551648,"score_gpt":0.23505730689201232,"score_spread":0.22598725942946069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1664228137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98153895,0.0032405397,0.0047730496,0.00048269832,0.00021975247,0.00011012145,0.0018078579,0.0003141649,0.007512933],"genre_scores_gemma":[0.9673003,0.0020334038,0.0064197388,0.00028640017,0.00011003867,0.00016546148,0.003002519,0.000105115454,0.020577036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980253,0.000024720377,0.000025626505,0.000036602007,0.000056360706,0.000054138847],"domain_scores_gemma":[0.9997228,0.000037268226,0.00008960037,0.00003511941,0.000026757163,0.000088410336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020319184,0.0006106831,0.00021167293,0.0004713671,0.00023911576,0.00024581296,0.0003152968,0.00056944415,0.0062822406],"category_scores_gemma":[0.00015659351,0.00014320291,0.00034628462,0.00015365555,0.00037877238,0.00023780958,0.00025358563,0.00073279074,0.0014615601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006691418,0.00005848667,0.0001692158,0.000055929424,0.0000045828606,0.00014586048,0.000009682967,0.00003433984,0.99666303,0.00021849922,0.00014689741,0.0018242981],"study_design_scores_gemma":[0.00009827461,0.001110642,0.005326665,0.000023708111,0.000025688028,0.0009707842,0.00002086865,0.0004109528,0.98423856,0.00008731319,0.007679246,0.0000072928306],"about_ca_topic_score_codex":0.0006000014,"about_ca_topic_score_gemma":0.00067775336,"teacher_disagreement_score":0.0062822406,"about_ca_system_score_codex":0.00047580985,"about_ca_system_score_gemma":0.00025473887,"threshold_uncertainty_score":0.02101618},"labels":[],"label_agreement":null},{"id":"W1669180776","doi":"10.4049/jimmunol.169.12.7078","title":"Mitochondrial Reactive Oxygen Species Regulate Spatial Profile of Proinflammatory Responses in Lung Venular Capillaries","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Heart, Lung, and Blood Institute","keywords":"Proinflammatory cytokine; Reactive oxygen species; Cell biology; Cytosol; Mitochondrial ROS; Chemistry; Receptor; Tumor necrosis factor alpha; Mitochondrion; Inflammation; Endocrinology; Internal medicine; Biology; Biochemistry; Immunology; Medicine; Enzyme","score_opus":0.01106818774892093,"score_gpt":0.21394350118838015,"score_spread":0.20287531343945922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1669180776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949162,0.001962451,0.0022145633,0.00006458452,0.000008011543,0.000012894234,0.00010011903,0.000032260727,0.0006888004],"genre_scores_gemma":[0.99764246,0.0006742481,0.0010874806,0.000016949689,0.000005788065,0.000017315982,0.00006503041,0.0000039487063,0.00048662856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991405,0.000015354617,0.0000052612045,0.000021472539,0.00001614133,0.000027816326],"domain_scores_gemma":[0.9999007,0.00001469605,0.000031183303,0.000004707481,0.000021678443,0.000026928414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010415025,0.00011091663,0.00013364461,0.00015883101,0.00010871503,0.00028980945,0.000094421186,0.00019699334,0.00063279696],"category_scores_gemma":[0.00014422726,0.000076808734,0.00008345234,0.00011024095,0.00012361315,0.00025669983,0.000110846326,0.00025804504,0.00012379812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017757679,0.000010559903,0.0004521804,0.00001721144,0.0000020196856,0.000040429397,0.000015614147,0.00003498539,0.998365,0.000068626614,0.000013510547,0.0008023563],"study_design_scores_gemma":[0.000033354034,0.0004391928,0.042228073,0.00001135992,0.000025114836,0.00043519895,0.00020306451,0.0022178758,0.95297605,0.0002361136,0.0011866781,0.000007936026],"about_ca_topic_score_codex":0.0003736499,"about_ca_topic_score_gemma":0.0005684196,"teacher_disagreement_score":0.00063279696,"about_ca_system_score_codex":0.0002131146,"about_ca_system_score_gemma":0.0001219524,"threshold_uncertainty_score":0.0021169186},"labels":[],"label_agreement":null},{"id":"W1670151716","doi":"10.4049/jimmunol.166.7.4664","title":"Evidence for a Role for SAM68 in the Responses of Human Neutrophils to Ligation of CD32 and to Monosodium Urate Crystals","year":2001,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"National Institutes of Health","keywords":"Uric acid; Ligation; Internal medicine; Chemistry; Immunology; Endocrinology; Medicine","score_opus":0.04908733447160516,"score_gpt":0.32162844768942345,"score_spread":0.27254111321781826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1670151716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99474525,0.002683436,0.0010873617,0.0000968692,0.000020734748,0.000035511373,0.00014251837,0.000017360388,0.0011710397],"genre_scores_gemma":[0.996775,0.0008220781,0.0009878635,0.000046468034,0.000016833605,0.000033726417,0.00036449553,0.0000034363072,0.0009501432],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997764,0.00006350202,0.00002188193,0.000023517383,0.000050575673,0.0000640931],"domain_scores_gemma":[0.99980265,0.00004335778,0.000051876737,0.000025576654,0.0000328724,0.000043686217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018078108,0.0002712216,0.00017613714,0.00018423004,0.00013994718,0.00018796223,0.00011041569,0.00031374773,0.0021611967],"category_scores_gemma":[0.00031330864,0.00011029057,0.00014759605,0.000110086105,0.00014957944,0.00010653995,0.0002341941,0.00024012146,0.0004856692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005821487,0.000030468975,0.00079462724,0.00006680325,0.0000043178893,0.0001684173,0.000025219253,0.000011620272,0.99685717,0.00006731647,0.000024519404,0.0013673947],"study_design_scores_gemma":[0.00007267347,0.0009992345,0.05310081,0.000020826024,0.000024317646,0.0015728234,0.00009452591,0.0004900533,0.93970096,0.00011191772,0.0038055545,0.000006213054],"about_ca_topic_score_codex":0.00022689793,"about_ca_topic_score_gemma":0.00027645717,"teacher_disagreement_score":0.0021611967,"about_ca_system_score_codex":0.00011304191,"about_ca_system_score_gemma":0.000107854496,"threshold_uncertainty_score":0.007229924},"labels":[],"label_agreement":null},{"id":"W1671647835","doi":"10.4049/jimmunol.175.11.7288","title":"Cooperation between 4-1BB and ICOS in the Immune Response to Influenza Virus Revealed by Studies of CD28/ICOS-Deficient Mice","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto; University Health Network","funders":"Amgen","keywords":"Immune system; CD28; Virology; Virus; Immunology; Biology; T cell","score_opus":0.022620665216777473,"score_gpt":0.2955167657639932,"score_spread":0.27289610054721575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1671647835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945545,0.00090946176,0.0027245125,0.00011012471,0.000032457323,0.00004146797,0.00020779771,0.000080756196,0.0013387232],"genre_scores_gemma":[0.99014145,0.00079229433,0.004944077,0.00009715635,0.000033371583,0.0001364685,0.0004175044,0.00007387474,0.0033637795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99949956,0.00008956379,0.000049352886,0.00011712811,0.000093480325,0.00015082466],"domain_scores_gemma":[0.999529,0.000063167674,0.00013800904,0.00004325008,0.000025371877,0.00020126748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032820072,0.0013328126,0.00060985226,0.00078352756,0.00029499875,0.00044105528,0.0005387343,0.00086032995,0.0013456233],"category_scores_gemma":[0.00021082797,0.00048289992,0.000632462,0.00017154618,0.0006560636,0.0004714356,0.00028766392,0.0016539562,0.0004949063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020901488,0.00005547255,0.00013514087,0.000018232748,0.0000030167712,0.000064358974,0.00001253471,0.00006152431,0.9990138,0.00008601258,0.000012181252,0.00032878923],"study_design_scores_gemma":[0.000107627406,0.001170482,0.0053002653,0.000020734558,0.000052977353,0.00085862575,0.000054571006,0.0019058839,0.9886607,0.00017619938,0.0016807067,0.000011270368],"about_ca_topic_score_codex":0.0004514115,"about_ca_topic_score_gemma":0.0006191995,"teacher_disagreement_score":0.0013456233,"about_ca_system_score_codex":0.00041289415,"about_ca_system_score_gemma":0.00024461732,"threshold_uncertainty_score":0.004501581},"labels":[],"label_agreement":null},{"id":"W1673809118","doi":"10.4049/jimmunol.175.12.8236","title":"Pure Lipopolysaccharide or Synthetic Lipid A Induces Activation of p21Ras in Primary Macrophages through a Pathway Dependent on Src Family Kinases and PI3K","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Wortmannin; Lipopolysaccharide; MAPK/ERK pathway; Cell biology; PI3K/AKT/mTOR pathway; Proto-oncogene tyrosine-protein kinase Src; Kinase; LY294002; Chemistry; Macrophage; Signal transduction; Lipid A; Src family kinase; GTPase; Biology; Immunology; Biochemistry","score_opus":0.01501923015402186,"score_gpt":0.2383854142486099,"score_spread":0.22336618409458803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1673809118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939334,0.0018862275,0.0019541567,0.00016311799,0.00010293563,0.00006198498,0.00039387427,0.00006997743,0.0014343143],"genre_scores_gemma":[0.9929443,0.0014055128,0.0026103358,0.0001052119,0.000060872524,0.00010640521,0.00075456686,0.000015995593,0.0019969214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996979,0.00006477856,0.000036594338,0.000031482454,0.00006646194,0.00010276484],"domain_scores_gemma":[0.99980885,0.000045677938,0.000030582927,0.000030086136,0.000022847915,0.00006189798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003308983,0.0004963824,0.0003612911,0.00031774802,0.00020067325,0.00028580934,0.0001677866,0.0002550473,0.0011842867],"category_scores_gemma":[0.00017106057,0.00017527449,0.0004058097,0.00020711348,0.0003072869,0.00024239179,0.00026842192,0.000733618,0.00045514753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023412904,0.00004385298,0.00005709452,0.000033436056,0.0000033109493,0.000049723127,0.000008379966,0.000016612361,0.9991479,0.000044956414,0.000024575,0.00033602343],"study_design_scores_gemma":[0.00008001705,0.00097417104,0.003186947,0.000008396722,0.000017535707,0.00017890634,0.00003284704,0.00064803247,0.9936826,0.00009802529,0.0010876736,0.0000049755577],"about_ca_topic_score_codex":0.00029887285,"about_ca_topic_score_gemma":0.00061406416,"teacher_disagreement_score":0.0011842867,"about_ca_system_score_codex":0.0002874043,"about_ca_system_score_gemma":0.0002951203,"threshold_uncertainty_score":0.0039618015},"labels":[],"label_agreement":null},{"id":"W1673881514","doi":"10.4049/jimmunol.174.3.1602","title":"Immune Activation of Type I IFNs by <i>Listeria monocytogenes</i> Occurs Independently of TLR4, TLR2, and Receptor Interacting Protein 2 but Involves TANK-Binding Kinase 1","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Howard Hughes Medical Institute; U.S. Public Health Service; National Cancer Institute; National Institutes of Health; University of California, Los Angeles; University of Toronto","keywords":"TANK-binding kinase 1; TLR2; Signal transduction; Biology; Cell biology; TLR4; Kinase; Listeria monocytogenes; Intracellular; Protein kinase A; Intracellular parasite; MAP kinase kinase kinase; Bacteria; Genetics","score_opus":0.015313894509863894,"score_gpt":0.24673204157253034,"score_spread":0.23141814706266645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1673881514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99247015,0.0015495289,0.002148851,0.00017424056,0.000052749507,0.000012036662,0.0002137531,0.000089177214,0.0032895708],"genre_scores_gemma":[0.9950604,0.0005438777,0.0018531784,0.000111208836,0.000024095802,0.000019611974,0.00043378526,0.000015699577,0.0019381215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997484,0.0000451859,0.00002245885,0.000045319604,0.00004818458,0.00009055078],"domain_scores_gemma":[0.99986887,0.000019040433,0.00004863314,0.000021581072,0.000015930984,0.00002591038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001858809,0.00041070385,0.00021637068,0.00016786822,0.00015816165,0.0004211128,0.00013430267,0.00026636178,0.0016601313],"category_scores_gemma":[0.00016099053,0.00016525979,0.0003873081,0.000076530036,0.00021145064,0.00024375544,0.00027440835,0.00049619295,0.0007664257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018551288,0.000019787683,0.0005165949,0.00002993241,0.0000035364835,0.00004455516,0.0000060143384,0.00002316662,0.9979261,0.00009204413,0.00005690193,0.0010959324],"study_design_scores_gemma":[0.00004773114,0.00029783582,0.013426575,0.000014283908,0.000018093526,0.0006861611,0.000041338953,0.00071325037,0.98189914,0.00018283176,0.0026669013,0.000005684055],"about_ca_topic_score_codex":0.00021402139,"about_ca_topic_score_gemma":0.00030813794,"teacher_disagreement_score":0.0016601313,"about_ca_system_score_codex":0.00044642814,"about_ca_system_score_gemma":0.00022245856,"threshold_uncertainty_score":0.0055537224},"labels":[],"label_agreement":null},{"id":"W1697895173","doi":"10.1111/cts.12256","title":"Lipidomic Profiling of Sinus Mucosa from Patients with Chronic Rhinosinusitis","year":2015,"lang":"en","type":"article","venue":"Clinical and Translational Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Center for Research Resources; National Institutes of Health","keywords":"Nasal polyps; Chronic rhinosinusitis; Sinusitis; Chromatography; Chemistry; Mass spectrometry; Electrospray ionization; Tandem mass spectrometry; Lipidomics; Gastroenterology; Medicine; Pathology; Internal medicine; Biochemistry; Immunology","score_opus":0.024922511039961515,"score_gpt":0.28159145640780847,"score_spread":0.25666894536784696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1697895173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99927765,0.0003443055,0.000092056696,0.000015731464,0.0000042333036,0.0000072315515,0.000121304576,0.0000023367625,0.00013504758],"genre_scores_gemma":[0.9986364,0.00033319127,0.0003742303,0.00004570455,0.000010974585,0.000012215847,0.00044319942,0.000002865448,0.0001412913],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99982685,0.000028850696,0.000027660952,0.000042119307,0.000043727872,0.00003086488],"domain_scores_gemma":[0.99985504,0.000023658979,0.000040050774,0.00001047257,0.000045922425,0.000024919918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020046957,0.0003061447,0.0003304859,0.00081012794,0.00032358483,0.00039268084,0.00009186564,0.00030517284,0.000585943],"category_scores_gemma":[0.00048207433,0.00011933497,0.00015639013,0.00042947594,0.0002043909,0.00015829879,0.00026824643,0.00019486719,0.00014512437],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017676322,0.00008068508,0.6260517,0.00012329505,0.00010662026,0.0012780207,0.00050596177,0.0000763825,0.35352227,0.000027134922,0.00014618793,0.016314091],"study_design_scores_gemma":[0.00002873909,0.00068090204,0.9802639,0.00001945879,0.00008255223,0.0026530602,0.0008704406,0.00031429974,0.014157166,0.00003096993,0.0008888766,0.000009611702],"about_ca_topic_score_codex":0.001195602,"about_ca_topic_score_gemma":0.0015317352,"teacher_disagreement_score":0.001195602,"about_ca_system_score_codex":0.00012513534,"about_ca_system_score_gemma":0.00014915672,"threshold_uncertainty_score":0.0023772717},"labels":[],"label_agreement":null},{"id":"W1705803987","doi":"10.1186/s12931-015-0266-7","title":"Role of pulmonary microvascular endothelial cell apoptosis in murine sepsis-induced lung injury in vivo","year":2015,"lang":"en","type":"article","venue":"Respiratory Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Lawson Health Research Institute; Western University","funders":"Lawson Health Research Institute; Heart and Stroke Foundation of Canada","keywords":"Sepsis; Vascular permeability; Pathology; Annexin; Apoptosis; Lung; ARDS; Propidium iodide; Pulmonary edema; TUNEL assay; Medicine; Biology; Immunology; Programmed cell death; Internal medicine; Staining; Immunohistochemistry","score_opus":0.04218156913676774,"score_gpt":0.32054747554893137,"score_spread":0.27836590641216363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1705803987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981458,0.0067791766,0.009354506,0.00015076865,0.00007118425,0.00008626284,0.0007380968,0.00017638059,0.0011856403],"genre_scores_gemma":[0.99191344,0.0015696047,0.004566508,0.000083603496,0.000023394836,0.00017256598,0.0005981101,0.000015252243,0.0010574092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964976,0.00009283202,0.000033140328,0.00006807266,0.00007347485,0.000082641986],"domain_scores_gemma":[0.9996996,0.000040571023,0.00010144415,0.000035060835,0.0000576702,0.00006569871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048379466,0.00048808203,0.0003791875,0.0004399595,0.00018437767,0.00025988198,0.00022052982,0.000560819,0.0010372339],"category_scores_gemma":[0.00022077533,0.00016433849,0.0003044118,0.00022687546,0.0002963931,0.00036281673,0.00022235104,0.0010999752,0.00032616325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013136512,0.0002021019,0.0012375244,0.00013571703,0.000014600573,0.00011306107,0.00004641703,0.00018186128,0.9936395,0.000090314905,0.00006158789,0.0029637783],"study_design_scores_gemma":[0.000066878085,0.0038007863,0.012601796,0.00002726594,0.000041863772,0.00042021848,0.000052262832,0.0023907165,0.9796275,0.000085984364,0.00087602314,0.000008774218],"about_ca_topic_score_codex":0.0003220224,"about_ca_topic_score_gemma":0.0003344322,"teacher_disagreement_score":0.0010372339,"about_ca_system_score_codex":0.00034780754,"about_ca_system_score_gemma":0.00022141915,"threshold_uncertainty_score":0.0034698844},"labels":[],"label_agreement":null},{"id":"W1709135008","doi":"10.3233/ch-2010-1331","title":"Vancomycin and to lesser extent tobramycin have vasomodulatory effects in experimental endotoxemia in the rat","year":2010,"lang":"en","type":"article","venue":"Clinical Hemorheology and Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Tobramycin; Antibiotics; Microcirculation; Vancomycin; Sepsis; Medicine; Intravital microscopy; Aminoglycoside; Pharmacology; Contractility; Lipopolysaccharide; Anesthesia; Internal medicine; Gentamicin; Microbiology; Biology; Bacteria; Staphylococcus aureus","score_opus":0.013461211085155914,"score_gpt":0.31054186300373327,"score_spread":0.29708065191857735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1709135008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953061,0.002317076,0.0011312414,0.00020202062,0.000066543704,0.000037382393,0.00023206153,0.000053952655,0.0006536321],"genre_scores_gemma":[0.99226576,0.002639783,0.0017363651,0.0001263539,0.000049674516,0.00009127084,0.00038153285,0.000018517369,0.0026906587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997522,0.000048541147,0.000021141823,0.00004275232,0.00004958126,0.000085861924],"domain_scores_gemma":[0.9996346,0.000035129146,0.0001217361,0.000042404154,0.00003835564,0.00012772017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023735926,0.0005460136,0.0004553565,0.00049932796,0.00015673168,0.0003011433,0.00022636443,0.00049811625,0.0012652869],"category_scores_gemma":[0.0002961273,0.0002568678,0.00040134595,0.00022731586,0.00035391486,0.00037757924,0.00017611278,0.0010462407,0.00025552482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042177527,0.0009109129,0.00048803014,0.00010973993,0.000024128056,0.00012469829,0.00004922991,0.00010170067,0.9894051,0.000092660826,0.0000796897,0.004396257],"study_design_scores_gemma":[0.00035003832,0.028339885,0.012287882,0.000036191028,0.00013748973,0.0003808259,0.00015068441,0.0008146513,0.9545468,0.000117198004,0.002815451,0.000022947623],"about_ca_topic_score_codex":0.0006022396,"about_ca_topic_score_gemma":0.0008682461,"teacher_disagreement_score":0.0012652869,"about_ca_system_score_codex":0.00021127913,"about_ca_system_score_gemma":0.0003724269,"threshold_uncertainty_score":0.004232824},"labels":[],"label_agreement":null},{"id":"W1725939292","doi":"10.25011/cim.v31i4.4789","title":"XMODULATION IN MICEAND MEN: IL-10 PRODUCING CELLS INBLOOD AND LYMPHOID TISSUE","year":2008,"lang":"en","type":"article","venue":"Clinical and investigative medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Ex vivo; Immune system; Immunology; Peripheral blood mononuclear cell; Cytokine; Population; CD36; Spleen; Biology; Interleukin; Medicine; In vivo; Internal medicine; In vitro; Receptor","score_opus":0.0807547542502292,"score_gpt":0.30263822912930427,"score_spread":0.22188347487907506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1725939292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96199656,0.009535575,0.014636044,0.00073211035,0.0004484508,0.0005422316,0.0040282784,0.0011287247,0.006952091],"genre_scores_gemma":[0.94950557,0.0036730943,0.011331021,0.0006250161,0.00021227091,0.0009232437,0.003024804,0.00028465706,0.030420352],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99899286,0.00016407848,0.000088651475,0.00035666188,0.00019836974,0.00019938519],"domain_scores_gemma":[0.9996749,0.00003154045,0.00009402483,0.000055456985,0.0000164327,0.00012763496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087233516,0.0012727694,0.000557163,0.001624138,0.0005873347,0.00071216497,0.0005526564,0.0009632261,0.0077325776],"category_scores_gemma":[0.00019075623,0.0006652165,0.00072942785,0.0003819524,0.00070449227,0.000617745,0.00056059,0.0015024487,0.002725838],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019766367,0.00048943644,0.0007548074,0.0001427232,0.00001878178,0.00034244492,0.00009601211,0.000098612414,0.9913293,0.00040492226,0.0003415053,0.0040049083],"study_design_scores_gemma":[0.00060613104,0.006124828,0.016617704,0.00009992992,0.00011301987,0.0046155998,0.00019315157,0.0015441646,0.9487108,0.00037664277,0.02095711,0.00004095413],"about_ca_topic_score_codex":0.0003594408,"about_ca_topic_score_gemma":0.00059566216,"teacher_disagreement_score":0.0077325776,"about_ca_system_score_codex":0.000356758,"about_ca_system_score_gemma":0.0003041603,"threshold_uncertainty_score":0.025867999},"labels":[],"label_agreement":null},{"id":"W1726675821","doi":"10.4049/jimmunol.0901786","title":"Selective Down-Regulation of Neutrophil Mac-1 in Endotoxemic Hepatic Microcirculation via IL-10","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Alberta Children's Hospital Foundation; Fondation pour la Recherche Médicale; Canadian Child Health Clinician Scientist Program; Children's Hospital Foundation; Child and Family Research Institute","keywords":"Intravital microscopy; Integrin; Chemistry; Inflammation; Immunology; Chemotaxis; Cell biology; Integrin alpha M; Microcirculation; Biology; Receptor; Internal medicine; Medicine; Biochemistry; Flow cytometry","score_opus":0.00547626566242475,"score_gpt":0.21623314984588268,"score_spread":0.21075688418345792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1726675821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972691,0.00073784,0.0012951831,0.00008555593,0.000025701658,0.000018001163,0.00012523153,0.000044082102,0.00039932775],"genre_scores_gemma":[0.9963075,0.0005576894,0.0014886013,0.00006890111,0.000019055702,0.00006351538,0.00025547555,0.000014697944,0.0012246692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982774,0.00003796322,0.000018290115,0.000025955462,0.000029705343,0.00006039996],"domain_scores_gemma":[0.99986935,0.000021714302,0.00003886737,0.000015983358,0.000012625669,0.000041434392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016911508,0.0005160661,0.00031903898,0.0001378677,0.00008697234,0.00027607576,0.00014273,0.00023503564,0.0009952631],"category_scores_gemma":[0.0001290727,0.00014604781,0.0001881392,0.0000856712,0.00023472545,0.00019563401,0.0001627614,0.0007777228,0.00023662647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019034384,0.000028509008,0.00012246596,0.0000232739,0.0000020713871,0.00004098639,0.000011486408,0.000017632718,0.99910176,0.00002916805,0.000018509918,0.00041386893],"study_design_scores_gemma":[0.000030866533,0.00043604636,0.0056976327,0.0000053731947,0.000016922824,0.00015273261,0.000028808334,0.0006206575,0.9923955,0.000021005271,0.00059144554,0.00000301003],"about_ca_topic_score_codex":0.00028675754,"about_ca_topic_score_gemma":0.0004392379,"teacher_disagreement_score":0.0009952631,"about_ca_system_score_codex":0.00021857693,"about_ca_system_score_gemma":0.00015143823,"threshold_uncertainty_score":0.0033294559},"labels":[],"label_agreement":null},{"id":"W1741900256","doi":"10.1089/jir.2015.0072","title":"The Role of Virus Infection in Deregulating the Cytokine Response to Secondary Bacterial Infection","year":2015,"lang":"en","type":"review","venue":"Journal of Interferon & Cytokine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Proinflammatory cytokine; Lymphocytic choriomeningitis; Immunology; Biology; Immune system; Virus; Cytokine; Innate immune system; Acquired immune system; Tumor necrosis factor alpha; Virology; Microbiology; CD8; Inflammation","score_opus":0.06044338120618601,"score_gpt":0.38536059464781003,"score_spread":0.324917213441624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1741900256","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023963052,0.9987803,0.000091698756,0.00015422741,0.00018369309,0.0000022165475,0.000005395735,0.0000037065818,0.00053916406],"genre_scores_gemma":[0.0014974928,0.9976525,0.00011251361,0.00010493875,0.00022395943,0.000004821036,0.000012096941,0.0000010534282,0.00039065402],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998074,0.000031998636,0.00003332527,0.000037137623,0.00006551477,0.000024520168],"domain_scores_gemma":[0.9997764,0.00009566717,0.000037189988,0.0000078868015,0.000052025094,0.00003077817],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005235226,0.0006339487,0.0009799929,0.0015318299,0.00022094844,0.000841618,0.00072779995,0.0010543263,0.0012684515],"category_scores_gemma":[0.00046787094,0.00023533318,0.00031610913,0.0011772509,0.0005999262,0.0009640827,0.0005512179,0.0013850735,0.0010742551],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012277774,0.00007842428,0.00047332267,0.011824843,0.00007143023,0.0005402994,0.000114100665,0.0003314901,0.0078381775,0.005138334,0.015737614,0.9577293],"study_design_scores_gemma":[0.000025918664,0.0001851473,0.0033174704,0.0027912068,0.000101722166,0.004750482,0.00011213934,0.00015782767,0.0028844792,0.0030249485,0.9826202,0.000028618897],"about_ca_topic_score_codex":0.00047756906,"about_ca_topic_score_gemma":0.000687157,"teacher_disagreement_score":0.0015318299,"about_ca_system_score_codex":0.00053327915,"about_ca_system_score_gemma":0.00064919685,"threshold_uncertainty_score":0.004243374},"labels":[],"label_agreement":null},{"id":"W1747581834","doi":"10.1111/j.1600-0463.2010.02684.x","title":"Differential susceptibility to lethal endotoxaemia in mice deficient in IL‐1α, IL‐1β or IL‐1 receptor type I","year":2010,"lang":"en","type":"article","venue":"Apmis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lipopolysaccharide; Cytokine; Receptor; Receptor antagonist; Biology; Endocrinology; Interleukin 10; Ratón; Interleukin; Internal medicine; Immunology; Chemistry; Antagonist; Medicine","score_opus":0.011942469082933675,"score_gpt":0.2545752438828776,"score_spread":0.24263277479994394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1747581834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99724543,0.00097398984,0.00090420555,0.00007283835,0.000021734226,0.000016822512,0.00030324463,0.000052296655,0.00040947046],"genre_scores_gemma":[0.9923907,0.0015618718,0.0018805315,0.00013221776,0.000034762772,0.00008910437,0.0008577313,0.000073436866,0.0029796911],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995254,0.000063186606,0.00006339006,0.00013275167,0.00008792912,0.0001273637],"domain_scores_gemma":[0.99918526,0.00005830174,0.0003507068,0.00006528762,0.000037640417,0.0003028353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032836004,0.0008897214,0.0006421663,0.0010201329,0.00020661327,0.00064019766,0.00032546904,0.00073215266,0.0014501777],"category_scores_gemma":[0.00025893966,0.0005407321,0.00052320986,0.00028418098,0.00061308,0.00055832154,0.00040283665,0.0014960342,0.00050815067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093351625,0.00008687543,0.00068250234,0.00002784385,0.000011300837,0.00008321061,0.000031126703,0.000028611616,0.9974368,0.00006718849,0.000016575343,0.00059443794],"study_design_scores_gemma":[0.0003322106,0.0062283664,0.07939979,0.00007780589,0.00026232906,0.0042474153,0.00036035158,0.0011680603,0.9053272,0.00041283143,0.0021166026,0.00006705784],"about_ca_topic_score_codex":0.00016689306,"about_ca_topic_score_gemma":0.00022153802,"teacher_disagreement_score":0.0014501777,"about_ca_system_score_codex":0.00029578392,"about_ca_system_score_gemma":0.00016990707,"threshold_uncertainty_score":0.0048513412},"labels":[],"label_agreement":null},{"id":"W1755096708","doi":"10.4049/jimmunol.0803864","title":"Cytokine Modulation of TLR Expression and Activation in Mesenchymal Stromal Cells Leads to a Proinflammatory Phenotype","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":310,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; McGill University; Jewish General Hospital","funders":"","keywords":"Proinflammatory cytokine; Immune system; TLR3; Cytokine; Chemokine; Cell biology; Mesenchymal stem cell; Innate immune system; Immunology; Biology; Inflammation; Chemistry; Toll-like receptor","score_opus":0.007785771259858666,"score_gpt":0.22742748986898878,"score_spread":0.21964171860913012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1755096708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99306583,0.0016560947,0.0035455546,0.0000898998,0.000030834526,0.00002458847,0.00020496987,0.00003774025,0.0013446177],"genre_scores_gemma":[0.9964875,0.00085993187,0.0014647596,0.000037348324,0.000014735184,0.00003022022,0.00023850793,0.0000057220204,0.0008613876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976915,0.0000707964,0.000024683699,0.0000213167,0.00005733344,0.000056741734],"domain_scores_gemma":[0.999902,0.000024771973,0.000028347305,0.000012935477,0.000013562949,0.000018307319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015471644,0.00025607308,0.00014591863,0.00014915019,0.000082742736,0.00026690887,0.00006768713,0.0001902879,0.0010415408],"category_scores_gemma":[0.00013134103,0.00010635634,0.00020659594,0.00013681974,0.00014992844,0.00009401671,0.00016118745,0.00033518617,0.00044998023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008877878,0.000012881248,0.00016801973,0.000025429434,0.000001997347,0.000034361132,0.0000073684923,0.000040747804,0.9986687,0.000059446178,0.000016011278,0.0008762411],"study_design_scores_gemma":[0.000011882376,0.0002674074,0.0017487063,0.000004486704,0.000012285781,0.00021244664,0.000022580722,0.0004870359,0.995672,0.00003820848,0.0015207657,0.0000021152312],"about_ca_topic_score_codex":0.00009433461,"about_ca_topic_score_gemma":0.00017585336,"teacher_disagreement_score":0.0010415408,"about_ca_system_score_codex":0.00013404473,"about_ca_system_score_gemma":0.00012444031,"threshold_uncertainty_score":0.003484249},"labels":[],"label_agreement":null},{"id":"W1760516212","doi":"10.1177/153537020422901003","title":"Unraveling the Molecular Details Involved in the Intimate Link between the Immune and Neuroendocrine Systems","year":2004,"lang":"en","type":"review","venue":"Experimental Biology and Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Proinflammatory cytokine; Immune system; Circumventricular organs; Signal transduction; Neuroscience; Receptor; Inflammation; Innate immune system; Biology; Cell biology; Homeostasis; Endogeny; Immunology; Central nervous system; Endocrinology","score_opus":0.02875274095546431,"score_gpt":0.3314344514409512,"score_spread":0.30268171048548687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1760516212","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038589374,0.99623317,0.00047399517,0.00071847835,0.00036014387,0.0000028015045,0.000007113576,0.0000073948536,0.0018110061],"genre_scores_gemma":[0.0016095099,0.99567324,0.00055959175,0.00028151835,0.0004720977,0.0000036523054,0.000013376125,0.0000013950543,0.0013854996],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986947,0.000028323926,0.000014582856,0.00002549157,0.00004571444,0.00001640178],"domain_scores_gemma":[0.99978906,0.000088422865,0.000026170645,0.0000126858695,0.000063142186,0.000020491309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041531792,0.000740717,0.00094070495,0.0012381421,0.000317566,0.0010231711,0.0007636298,0.0011400736,0.0024430288],"category_scores_gemma":[0.0004075329,0.00021415649,0.00027093006,0.0014978623,0.00071166124,0.0023434467,0.00051699026,0.0014631219,0.0022019437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114352886,0.000063464235,0.00031490458,0.0078191385,0.00005329103,0.0007306611,0.00018290835,0.00057938404,0.019132521,0.013023381,0.016845554,0.94114035],"study_design_scores_gemma":[0.000009835502,0.00006585311,0.0012218759,0.0013277562,0.000039567134,0.0019087306,0.00016796596,0.00011338622,0.0017823771,0.0070662717,0.9862824,0.000013920944],"about_ca_topic_score_codex":0.00069430977,"about_ca_topic_score_gemma":0.0012990359,"teacher_disagreement_score":0.0024430288,"about_ca_system_score_codex":0.0006425217,"about_ca_system_score_gemma":0.0010677248,"threshold_uncertainty_score":0.008172691},"labels":[],"label_agreement":null},{"id":"W1763680449","doi":"10.1096/fasebj.29.1_supplement.558.3","title":"Toll‐like receptor 10 Expression in Chicken, Cattle, Pig, Dog, and Rat Lungs","year":2015,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Innate immune system; Receptor; Immunoelectron microscopy; Toll-like receptor; Immunohistochemistry; Cell biology; Immune system; Immunology; Molecular biology; Biochemistry","score_opus":0.01494512102165052,"score_gpt":0.24126250877163208,"score_spread":0.22631738774998156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1763680449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99598914,0.0016144988,0.0005320664,0.000046275312,0.000024865385,0.00001093435,0.00048313796,0.000016204489,0.0012829797],"genre_scores_gemma":[0.9909847,0.0014406727,0.0011360219,0.000084469255,0.000017289842,0.00004602278,0.0011315964,0.000011343217,0.0051479307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985504,0.000017137929,0.000010158613,0.000050731145,0.00002156047,0.00004541638],"domain_scores_gemma":[0.9998511,0.000035890054,0.000033995315,0.000011582903,0.000028758106,0.000038735776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018821475,0.00018858821,0.00015478255,0.00068607467,0.00016802034,0.00033506315,0.00012020282,0.00034750215,0.0015078742],"category_scores_gemma":[0.00016349027,0.00019723862,0.0002003773,0.00021231893,0.00023242274,0.00022905986,0.00012825963,0.00031443196,0.00036143238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010418063,0.00006701318,0.011475196,0.00014216376,0.000025519059,0.00046210084,0.0002371174,0.000061915256,0.98283523,0.00016126157,0.0001264749,0.0033642347],"study_design_scores_gemma":[0.000083827195,0.002698988,0.59364325,0.00007276298,0.00017873685,0.004847307,0.0020026946,0.0014104652,0.3863654,0.00019018569,0.0084686205,0.00003761457],"about_ca_topic_score_codex":0.0012287163,"about_ca_topic_score_gemma":0.0014924237,"teacher_disagreement_score":0.0015078742,"about_ca_system_score_codex":0.00022820056,"about_ca_system_score_gemma":0.00011379009,"threshold_uncertainty_score":0.005044341},"labels":[],"label_agreement":null},{"id":"W178147368","doi":"10.1007/978-3-7091-6346-7_10","title":"Indomethacin and Cyclosporin a Inhibit in Vitro Ischemia-Induced Expression of ICAM-1 and Chemokines in Human Brain Endothelial Cells","year":2000,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; Institute for Biological Sciences","funders":"","keywords":"Chemokine; Ischemia; Pharmacology; Medicine; Blood–brain barrier; Inflammation; In vitro; Chemotaxis; Infiltration (HVAC); Immunology; ICAM-1; Brain ischemia; Cell adhesion molecule; Biology; Internal medicine; Central nervous system; Receptor; Biochemistry","score_opus":0.00691926881207713,"score_gpt":0.22903026903040846,"score_spread":0.22211100021833133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W178147368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908104,0.006301386,0.00068207126,0.00015776158,0.00012543697,0.000046215402,0.00027482142,0.000040059083,0.0015618866],"genre_scores_gemma":[0.98930514,0.0057740523,0.00071201805,0.00007120268,0.00015545884,0.00009831772,0.0011334777,0.0000140270995,0.0027364003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973994,0.00005297555,0.00001773689,0.000017907565,0.000027743245,0.00014365216],"domain_scores_gemma":[0.9997595,0.000087065935,0.000031243017,0.00004653948,0.000022838616,0.00005274756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024203128,0.00052820443,0.00056809705,0.0005051293,0.00045286876,0.0004775788,0.00042438286,0.0004168355,0.0024233968],"category_scores_gemma":[0.00046854373,0.00026622112,0.0005288898,0.00052994373,0.000379091,0.0003867502,0.0002460918,0.0009996078,0.0006612946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050747404,0.0008328957,0.00074621313,0.00018498927,0.000048427133,0.0005525602,0.00017362116,0.0003050612,0.98415977,0.00032154797,0.0004890011,0.0071112337],"study_design_scores_gemma":[0.00046559426,0.0024602746,0.022450099,0.000020715042,0.00012268686,0.0007411108,0.00018480186,0.0011855958,0.96762663,0.00015310374,0.004569628,0.000019701296],"about_ca_topic_score_codex":0.0034647668,"about_ca_topic_score_gemma":0.004057834,"teacher_disagreement_score":0.0034647668,"about_ca_system_score_codex":0.0005218927,"about_ca_system_score_gemma":0.00065962155,"threshold_uncertainty_score":0.008107126},"labels":[],"label_agreement":null},{"id":"W1785914948","doi":"10.4049/jimmunol.1302412","title":"Cigarette Smoke Primes the Pulmonary Environment to IL-1α/CXCR-2–Dependent Nontypeable <i>Haemophilus influenzae</i>–Exacerbated Neutrophilia in Mice","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Neutrophilia; Haemophilus influenzae; Immunology; Alveolar macrophage; Lung; Medicine; Biology; Microbiology; Macrophage; Internal medicine; In vitro","score_opus":0.008623507226816809,"score_gpt":0.21106426404069575,"score_spread":0.20244075681387894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1785914948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99345773,0.0013791193,0.0021588244,0.00033790327,0.00009055529,0.00012883813,0.0005923491,0.00016957949,0.0016851107],"genre_scores_gemma":[0.9897063,0.0011542309,0.0029252714,0.00038128142,0.00004389081,0.00020106917,0.0006612081,0.00004723594,0.0048795855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959224,0.000087328764,0.000035250243,0.00007846793,0.0000884688,0.000118287266],"domain_scores_gemma":[0.99976176,0.000016972419,0.00008972127,0.000032834716,0.000014264431,0.0000843948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003295037,0.00082979194,0.00043577116,0.0003795079,0.00023651031,0.0004349173,0.00037900914,0.00073003984,0.0013516486],"category_scores_gemma":[0.000102318976,0.00046152226,0.0005948293,0.00012598024,0.0005824871,0.00037286885,0.00028271304,0.001690165,0.0005789864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007342814,0.00028132327,0.0004593539,0.000049035658,0.000009589702,0.00011947782,0.000024267305,0.000067466935,0.99705505,0.0001558127,0.000081349695,0.0009629495],"study_design_scores_gemma":[0.00032468222,0.0045596478,0.026410865,0.00004939025,0.00006981036,0.0011884245,0.000121538666,0.002236597,0.9604998,0.00026535068,0.004254285,0.000019548957],"about_ca_topic_score_codex":0.000717907,"about_ca_topic_score_gemma":0.0014806491,"teacher_disagreement_score":0.0013516486,"about_ca_system_score_codex":0.00041583178,"about_ca_system_score_gemma":0.0004465073,"threshold_uncertainty_score":0.0045217276},"labels":[],"label_agreement":null},{"id":"W1806335874","doi":"10.4049/jimmunol.180.10.6977","title":"Development of a Novel Noncompetitive Antagonist of IL-1 Receptor","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Sherbrooke; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Allosteric regulation; Antagonist; Interleukin 1 receptor antagonist; Agonist; Receptor; Proinflammatory cytokine; In vivo; Allosteric modulator; Cell biology; Competitive antagonist; Biology; Chemistry; Pharmacology; Receptor antagonist; Biophysics; Biochemistry; Inflammation; Immunology","score_opus":0.01862458928967027,"score_gpt":0.23667817979527725,"score_spread":0.21805359050560696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1806335874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94474626,0.012193156,0.03175377,0.0005421468,0.0003110705,0.0005873543,0.00037833763,0.0003539753,0.009133903],"genre_scores_gemma":[0.9547463,0.007227209,0.02581513,0.0008287932,0.00012770579,0.00040084476,0.0011411933,0.000049562103,0.009663367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999864,0.000019741676,0.000009786698,0.00003408649,0.0000342888,0.000038113547],"domain_scores_gemma":[0.99993455,0.000012832599,0.000014183491,0.0000067098586,0.000009670806,0.000022116143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001950451,0.00044792774,0.00045587964,0.00014952697,0.000098523706,0.0003530907,0.0007461879,0.00045399167,0.001502717],"category_scores_gemma":[0.00017440526,0.0001781882,0.00023879725,0.00009460577,0.00019531662,0.0002304944,0.0002011497,0.0011221969,0.0008855235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020304564,0.00019010992,0.00008205202,0.000073257565,0.000010346823,0.00009461447,0.000013995378,0.00023220052,0.9890109,0.00031199484,0.00013644923,0.0096411],"study_design_scores_gemma":[0.0006904782,0.008459674,0.001894391,0.000023490767,0.000094185925,0.0022276063,0.000026213895,0.004938893,0.95899814,0.00019807082,0.02241776,0.000031051375],"about_ca_topic_score_codex":0.00019773724,"about_ca_topic_score_gemma":0.00039171474,"teacher_disagreement_score":0.001502717,"about_ca_system_score_codex":0.00023558641,"about_ca_system_score_gemma":0.0002959921,"threshold_uncertainty_score":0.0050271153},"labels":[],"label_agreement":null},{"id":"W1818455479","doi":"10.3389/fimmu.2015.00426","title":"HIV-1 Structural Proteins Serve as PAMPs for TLR2 Heterodimers Significantly Increasing Infection and Innate Immune Activation","year":2015,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"TLR2; Innate immune system; Immune system; Cell biology; Biology; Pathogen-associated molecular pattern; Western blot; Chemistry; Immunology; Pattern recognition receptor; Gene; Biochemistry","score_opus":0.012074685082459015,"score_gpt":0.23578212429902953,"score_spread":0.22370743921657052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1818455479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846407,0.0066063823,0.0053846906,0.00023633546,0.000049205715,0.00004343375,0.00033905866,0.00007682801,0.0026233702],"genre_scores_gemma":[0.9910001,0.0016276045,0.0037215946,0.00015035146,0.000022041328,0.00005708783,0.0005782679,0.000015401685,0.0028275202],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958473,0.00012259564,0.00003523284,0.0000710223,0.00010028395,0.0000861069],"domain_scores_gemma":[0.99991906,0.000015462305,0.000024743686,0.000011223273,0.0000120911,0.000017376598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002830267,0.00055261824,0.00024980493,0.00021453091,0.00022023857,0.0005514147,0.00016461231,0.00038346503,0.002228834],"category_scores_gemma":[0.00015524135,0.00021132044,0.00045624218,0.00017406186,0.00018299944,0.0003214574,0.00036177813,0.00066206045,0.0006749507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007405486,0.000020685673,0.00028386345,0.000046750956,0.000006252018,0.00003467289,0.000009599441,0.000024241821,0.99869883,0.00006695641,0.00003431986,0.0006997155],"study_design_scores_gemma":[0.000021997697,0.00028315687,0.006119981,0.0000117841355,0.000021076643,0.00069725304,0.00006661629,0.000978572,0.98823327,0.00008661316,0.0034744793,0.000005186268],"about_ca_topic_score_codex":0.0001597819,"about_ca_topic_score_gemma":0.00024661442,"teacher_disagreement_score":0.002228834,"about_ca_system_score_codex":0.0002072654,"about_ca_system_score_gemma":0.00012990294,"threshold_uncertainty_score":0.0074561834},"labels":[],"label_agreement":null},{"id":"W1825815388","doi":"10.4049/jimmunol.172.1.318","title":"Dexamethasone Inhibits IL-12p40 Production in Lipopolysaccharide-Stimulated Human Monocytic Cells by Down-Regulating the Activity of c-Jun N-Terminal Kinase, the Activation Protein-1, and NF-κB Transcription Factors","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"Kinase; MAPK/ERK pathway; Biology; CD14; Transcription factor; Molecular biology; Protein kinase A; Cell biology; Transcription (linguistics); c-jun; p38 mitogen-activated protein kinases; Gene; Biochemistry","score_opus":0.015157015050242277,"score_gpt":0.2373090727278808,"score_spread":0.22215205767763851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1825815388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98281777,0.011050084,0.0032833917,0.00024853135,0.00015444058,0.00007938805,0.00051701796,0.00009841063,0.0017511162],"genre_scores_gemma":[0.9870188,0.0063900007,0.0032031185,0.00009660209,0.0000433766,0.000109861496,0.00064922805,0.00001127838,0.0024775588],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999851,0.000029594961,0.000022003556,0.000016655187,0.000043217577,0.000037440484],"domain_scores_gemma":[0.9999336,0.0000147717365,0.000014410738,0.00000955471,0.000008382862,0.000019269562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014995661,0.0004847553,0.00027951537,0.00018460899,0.00014113425,0.00018524818,0.0001363999,0.00017649539,0.0009909421],"category_scores_gemma":[0.000111247646,0.00013520507,0.000262515,0.00014280024,0.000203242,0.000099013465,0.0001332921,0.0005940886,0.00028852667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028869495,0.00008036281,0.000102659425,0.00006745571,0.000004219425,0.000047748763,0.000016439972,0.000033748176,0.99767095,0.00004013187,0.000028716588,0.0016190003],"study_design_scores_gemma":[0.000110598754,0.0012015249,0.003801307,0.000010648047,0.000017515893,0.00017757512,0.000033150398,0.00040326302,0.990849,0.00004334138,0.0033474064,0.000004748578],"about_ca_topic_score_codex":0.0005300478,"about_ca_topic_score_gemma":0.0011870769,"teacher_disagreement_score":0.0009909421,"about_ca_system_score_codex":0.00016078298,"about_ca_system_score_gemma":0.0003723,"threshold_uncertainty_score":0.0033150911},"labels":[],"label_agreement":null},{"id":"W1829785480","doi":"10.1097/ccm.0000000000001404","title":"Endotoxemia Following Multiple Trauma","year":2015,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Niagara Health System; Hôpital du Sacré-Cœur de Montréal; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; Université du Québec à Trois-Rivières","keywords":"Medicine; Trauma center; Organ dysfunction; Shock (circulatory); Prospective cohort study; Injury Severity Score; Multiple organ dysfunction syndrome; Major trauma; Internal medicine; Sepsis; Surgery; Retrospective cohort study; Emergency medicine; Poison control; Injury prevention","score_opus":0.033977164517405845,"score_gpt":0.3128645217606919,"score_spread":0.27888735724328606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1829785480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994671,0.00020591587,0.00008516409,0.000028880111,0.0000043212904,0.000008082832,0.000037169862,0.0000020844946,0.00016131585],"genre_scores_gemma":[0.9995665,0.0001419232,0.00007176019,0.000022825476,0.000016169131,0.0000068245768,0.00010951569,6.73261e-7,0.00006370618],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997758,0.00003509978,0.000029876877,0.000047338603,0.000049696995,0.0000621418],"domain_scores_gemma":[0.9987889,0.00014426543,0.00072496646,0.000039606497,0.000098239376,0.00020408018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023086106,0.0002507678,0.00034897367,0.00031124754,0.00034028204,0.00028916114,0.00015025689,0.00021350101,0.0015179369],"category_scores_gemma":[0.0015787969,0.000098722325,0.00019713295,0.00041532904,0.00025526623,0.0002778929,0.00037209934,0.0004504289,0.0001468138],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031703225,0.000058091,0.9927557,0.000034647084,0.000025618987,0.0021982435,0.000059654783,0.000051474555,0.0008572055,0.000020388668,0.00008039057,0.0035415248],"study_design_scores_gemma":[0.000019494319,0.0007375027,0.9859679,0.000028037251,0.000023799423,0.0123110935,0.00015154727,0.0001868406,0.00034663043,0.000044337583,0.00017773214,0.000005239889],"about_ca_topic_score_codex":0.00043534994,"about_ca_topic_score_gemma":0.00046232477,"teacher_disagreement_score":0.0015179369,"about_ca_system_score_codex":0.00019360946,"about_ca_system_score_gemma":0.00034023062,"threshold_uncertainty_score":0.0050780773},"labels":[],"label_agreement":null},{"id":"W1830574855","doi":"10.1093/ajcn/71.3.835","title":"Nutritional and metabolic effects of the endotoxin bacterial lipopolysaccharide in orally and parenterally fed rats","year":2000,"lang":"en","type":"article","venue":"American Journal of Clinical Nutrition","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nutrition Society; University of Toronto","funders":"","keywords":"Lipopolysaccharide; Internal medicine; Endocrinology; Wasting; Parenteral nutrition; Medicine; Tumor necrosis factor alpha; Biology","score_opus":0.008983107683977252,"score_gpt":0.28049734395322723,"score_spread":0.27151423626925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1830574855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99928844,0.00022890324,0.00020425898,0.000027644634,0.0000140124375,0.000011559066,0.0000669234,0.000011485465,0.0001467331],"genre_scores_gemma":[0.9964199,0.00061454857,0.0011621807,0.00007976323,0.000021043441,0.00010571104,0.00037701117,0.000015099254,0.0012047726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976593,0.00003881005,0.000017851968,0.000046508856,0.00005418697,0.00007665732],"domain_scores_gemma":[0.99944335,0.000029817478,0.00022275775,0.00004708998,0.000049086313,0.00020789876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021017206,0.0009594772,0.0006048385,0.00071162026,0.0002601616,0.00026490932,0.00024777278,0.00048344588,0.0011076597],"category_scores_gemma":[0.00024826702,0.00032732365,0.0003686114,0.00024044035,0.00070644263,0.0003834018,0.00027231892,0.0009922415,0.00021698324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01991516,0.002216128,0.005778316,0.0001507585,0.00006138517,0.00026303733,0.00007938409,0.00023410693,0.96455926,0.00008108548,0.00009320785,0.006568175],"study_design_scores_gemma":[0.0012031064,0.10480292,0.10544451,0.00008367463,0.00032653302,0.0012889211,0.0006443973,0.0022175424,0.7816156,0.0003479247,0.0019494952,0.00007542904],"about_ca_topic_score_codex":0.00073110225,"about_ca_topic_score_gemma":0.0010596996,"teacher_disagreement_score":0.0011076597,"about_ca_system_score_codex":0.00037302566,"about_ca_system_score_gemma":0.000496633,"threshold_uncertainty_score":0.0037055016},"labels":[],"label_agreement":null},{"id":"W1833951784","doi":"10.4049/jimmunol.173.3.2031","title":"Different Domains of <i>Pseudomonas aeruginosa</i> Exoenzyme S Activate Distinct TLRs","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Internalization; Cell biology; TLR2; Proinflammatory cytokine; TLR4; CD14; Peptidoglycan; Microbiology; Signal transduction; Monocyte; Biology; Chemistry; Receptor; Inflammation; Biochemistry; Immunology; Enzyme","score_opus":0.008502561902509097,"score_gpt":0.22040752676007574,"score_spread":0.21190496485756666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1833951784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942703,0.00091765425,0.003309534,0.00011788392,0.000018424642,0.000019190324,0.00006658347,0.000022023814,0.0012583522],"genre_scores_gemma":[0.9951147,0.0007345958,0.002622819,0.000101476464,0.00001339085,0.00002193331,0.00018846929,0.000007288857,0.0011952273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998375,0.000040692412,0.000017971763,0.000026400287,0.000026777749,0.000050508777],"domain_scores_gemma":[0.99988353,0.000030883617,0.000035743175,0.000015505875,0.000011297636,0.000022982866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001620251,0.00036985628,0.00016782324,0.00009982593,0.000090289,0.00036836675,0.00010927045,0.0003572442,0.001024585],"category_scores_gemma":[0.0001801427,0.00011492888,0.0004249018,0.0001047069,0.00019569653,0.00035672568,0.00029057916,0.00046635818,0.00039307968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117347336,0.000018427421,0.00034981745,0.000020253237,0.0000031974669,0.00006117687,0.000008384776,0.000030717893,0.9980715,0.00011558974,0.000016330525,0.0011872703],"study_design_scores_gemma":[0.000020108255,0.0004527295,0.009087169,0.000009392526,0.000013885609,0.00059246004,0.00006470955,0.00043136886,0.9873083,0.000119842225,0.0018956768,0.000004342971],"about_ca_topic_score_codex":0.000091924885,"about_ca_topic_score_gemma":0.00012361446,"teacher_disagreement_score":0.001024585,"about_ca_system_score_codex":0.0001816717,"about_ca_system_score_gemma":0.00009425584,"threshold_uncertainty_score":0.003427565},"labels":[],"label_agreement":null},{"id":"W1833987578","doi":"10.4049/jimmunol.0900986","title":"IDO Activates Regulatory T Cells and Blocks Their Conversion into Th17-Like T Cells","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":480,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute; National Institutes of Health; York University","keywords":"Cell biology; Chemistry; Biology","score_opus":0.0049357817602235345,"score_gpt":0.1968074682164444,"score_spread":0.19187168645622088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1833987578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9905303,0.001401531,0.0041624643,0.00013842862,0.0001256733,0.00004235703,0.00022686264,0.00013875838,0.0032338006],"genre_scores_gemma":[0.99287754,0.00082328,0.0028561999,0.00008939744,0.000043274784,0.000044556462,0.00033102036,0.000032857417,0.0029018577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997998,0.00003651906,0.000016277258,0.000031039883,0.000038906233,0.00007751713],"domain_scores_gemma":[0.99989605,0.000022452678,0.000019641853,0.00001607138,0.000007347938,0.000038403672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015327787,0.00040361966,0.0003149441,0.00023214902,0.00010406804,0.00035102924,0.00013963421,0.00020581167,0.0011761866],"category_scores_gemma":[0.00013243957,0.00011190229,0.00016534458,0.00010645739,0.00034345646,0.00015219388,0.00017174243,0.0008600701,0.00034666303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016929899,0.00007203074,0.00019490674,0.000040406474,0.0000026288867,0.00003897748,0.000009095467,0.000046969923,0.99764,0.00017044874,0.000037380818,0.0015777415],"study_design_scores_gemma":[0.000026334548,0.00035995423,0.00077110116,0.000004742486,0.000008702601,0.00011656696,0.000013172895,0.00035177753,0.9959573,0.000057089033,0.0023313959,0.0000019081576],"about_ca_topic_score_codex":0.00014265395,"about_ca_topic_score_gemma":0.00030365007,"teacher_disagreement_score":0.0011761866,"about_ca_system_score_codex":0.00017995128,"about_ca_system_score_gemma":0.00031912632,"threshold_uncertainty_score":0.0039346814},"labels":[],"label_agreement":null},{"id":"W1849265732","doi":"10.4049/jimmunol.176.6.3742","title":"Modulation of Neonatal Microbial Recognition: TLR-Mediated Innate Immune Responses Are Specifically and Differentially Modulated by Human Milk","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Cardiff University; Wellcome Trust","keywords":"TLR2; TLR4; TLR3; Innate immune system; Biology; TLR5; Immune system; Cell biology; Stimulation; Toll-like receptor; Breast milk; Signal transduction; Pattern recognition receptor; Immunology; Endocrinology; Biochemistry","score_opus":0.010236023200331885,"score_gpt":0.21165209526740833,"score_spread":0.20141607206707646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1849265732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98756987,0.009875852,0.0015404905,0.00009007554,0.000031995532,0.000026633745,0.0001664682,0.000034917834,0.0006637786],"genre_scores_gemma":[0.99327105,0.0038231334,0.0015887757,0.00010782953,0.000029796534,0.000051376774,0.00025946638,0.000011647599,0.0008568734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977726,0.00008444497,0.000016988064,0.000039169307,0.000038577055,0.000043533182],"domain_scores_gemma":[0.99986553,0.00004332748,0.000035478686,0.000015056429,0.00001895462,0.00002160938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003023069,0.00027031184,0.00032487352,0.00015741134,0.00006332882,0.0003008265,0.00014215492,0.00020049368,0.0010840994],"category_scores_gemma":[0.00039718207,0.00007148429,0.00015470288,0.00012661116,0.0002188885,0.00018977585,0.00027893874,0.00022956097,0.00022652053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011246222,0.000042491432,0.0017706648,0.00015136613,0.000010774926,0.0001276443,0.00004208183,0.000038771588,0.98516035,0.000037943908,0.00004407388,0.011449101],"study_design_scores_gemma":[0.000023130187,0.0015372258,0.031999007,0.000028343751,0.00005085859,0.00053976063,0.000086679036,0.0002441862,0.9617216,0.00006187009,0.0037012133,0.0000060655266],"about_ca_topic_score_codex":0.00015460009,"about_ca_topic_score_gemma":0.00013530605,"teacher_disagreement_score":0.0010840994,"about_ca_system_score_codex":0.00018376477,"about_ca_system_score_gemma":0.00018233253,"threshold_uncertainty_score":0.0036266446},"labels":[],"label_agreement":null},{"id":"W1856321184","doi":"10.4049/jimmunol.0802442","title":"The Immunostimulatory Activity of Unmethylated and Methylated CpG Oligodeoxynucleotide Is Dependent on Their Ability To Colocalize with TLR9 in Late Endosomes","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arbutus Biopharma (Canada); Arthritis Research Centre of Canada; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"TLR9; Colocalization; CpG site; CpG Oligodeoxynucleotide; DNA methylation; Endosome; Biology; DNA; Molecular biology; Methylation; Toll-Like Receptor 9; Cell biology; Gene; Biochemistry; Gene expression; Intracellular","score_opus":0.006351822160567649,"score_gpt":0.2307857867030808,"score_spread":0.22443396454251316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1856321184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98946136,0.0028735024,0.0055140997,0.000078922014,0.000051572908,0.00004627743,0.00008559464,0.00002578177,0.0018629895],"genre_scores_gemma":[0.9942222,0.0007062879,0.0036952673,0.00008308438,0.000017116432,0.000042855914,0.00013967848,0.000008671208,0.0010848443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997193,0.000075992124,0.000023422393,0.00004708982,0.00007228614,0.000061722625],"domain_scores_gemma":[0.9997882,0.000069086265,0.000041102183,0.000023005607,0.000028547429,0.000049960498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037514503,0.00031976769,0.00025800223,0.00017117854,0.000112184665,0.00026705166,0.00018685614,0.00036524722,0.001404742],"category_scores_gemma":[0.00032534028,0.00016072058,0.00025902165,0.0000973073,0.00026486613,0.00022943318,0.00024947835,0.0005142324,0.00024796446],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113553004,0.000017428205,0.000070492206,0.000028647162,0.000003797632,0.000014449716,0.0000054128745,0.00002702388,0.99861026,0.000072455645,0.0000061432847,0.001030362],"study_design_scores_gemma":[0.000012823698,0.0005027094,0.0016921392,0.000006580282,0.000010582403,0.00011097801,0.000008741025,0.00034086168,0.9966239,0.00004747695,0.00063958974,0.0000036788228],"about_ca_topic_score_codex":0.00017190905,"about_ca_topic_score_gemma":0.00027821102,"teacher_disagreement_score":0.001404742,"about_ca_system_score_codex":0.00021872619,"about_ca_system_score_gemma":0.00020957775,"threshold_uncertainty_score":0.00469929},"labels":[],"label_agreement":null},{"id":"W1857069017","doi":"10.1002/9780470015902.a0001132.pub2","title":"Immune System: Early Ontogeny","year":2015,"lang":"en","type":"other","venue":"Encyclopedia of Life Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immune system; Biology; Immunology; Immunity; Gestation; Antigen; Acquired immune system; Innate immune system; Innate lymphoid cell; Ontogeny; Pregnancy; Genetics","score_opus":0.013721522258768128,"score_gpt":0.2413386509292976,"score_spread":0.22761712867052947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1857069017","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.056547534,0.8143578,0.018279312,0.0029952116,0.0014019498,0.0002112958,0.002455469,0.00041175113,0.1033396],"genre_scores_gemma":[0.34789044,0.56348044,0.011889343,0.0016952552,0.0012612324,0.00031878945,0.0024601615,0.00013678771,0.07086749],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999813,0.00003679362,0.00002050273,0.000045184297,0.000052118226,0.000032454464],"domain_scores_gemma":[0.9997887,0.000045217166,0.000034270524,0.0000109752045,0.00008507929,0.000035644138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003743944,0.00036687712,0.00039971044,0.0011381957,0.00034847035,0.0014322862,0.0002638899,0.0006495298,0.006905336],"category_scores_gemma":[0.00051687716,0.00018748021,0.00028028738,0.0005874081,0.000491337,0.0007159035,0.0007653546,0.0011718096,0.0025415558],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004313313,0.00013053448,0.016282916,0.0043724054,0.00008225596,0.0025520427,0.0011104101,0.0005431887,0.05970025,0.048569247,0.02155008,0.84467536],"study_design_scores_gemma":[0.000016913704,0.00035438483,0.118367024,0.0034011905,0.00009421012,0.012459941,0.0007388811,0.00042896194,0.012744629,0.015619627,0.8357101,0.00006412164],"about_ca_topic_score_codex":0.0012021002,"about_ca_topic_score_gemma":0.00075472816,"teacher_disagreement_score":0.006905336,"about_ca_system_score_codex":0.00050440757,"about_ca_system_score_gemma":0.0006486863,"threshold_uncertainty_score":0.023100674},"labels":[],"label_agreement":null},{"id":"W1878522445","doi":"10.1111/j.1600-065x.2010.00978.x","title":"Use of defined TLR ligands as adjuvants within human vaccines","year":2010,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":435,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Vaccine adjuvant; Immune system; Biology; Immunology; Acquired immune system; Vaccination; Computational biology","score_opus":0.13134471478881046,"score_gpt":0.36690050356425447,"score_spread":0.235555788775444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1878522445","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021730158,0.9912758,0.0034990837,0.00025604825,0.00030022126,0.000034209315,0.000022575749,0.00002913536,0.0024099809],"genre_scores_gemma":[0.011544833,0.9812402,0.004335361,0.00032932952,0.00023722617,0.00005756542,0.000058314014,0.0000068266518,0.0021903184],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975985,0.00007429561,0.000021716169,0.000039816492,0.000080436366,0.000023927823],"domain_scores_gemma":[0.9998971,0.000043177468,0.00002330925,0.000006602574,0.000020260313,0.000009498806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007984621,0.00069982046,0.0008971897,0.0008293315,0.00014299483,0.00054137164,0.0005929662,0.00079774717,0.001187488],"category_scores_gemma":[0.00038559426,0.00023097663,0.00024840908,0.0005279525,0.0004576443,0.00078231934,0.0005188905,0.0010954249,0.0015484337],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019251683,0.00016403297,0.00022313565,0.010225858,0.000047548303,0.00035351416,0.00008146904,0.0012704671,0.09746094,0.012498276,0.0051722564,0.87231],"study_design_scores_gemma":[0.0000696399,0.00054421375,0.0006971369,0.0017772651,0.00006961168,0.0019939393,0.00004919988,0.00036022172,0.049099095,0.0035374104,0.94177157,0.00003062562],"about_ca_topic_score_codex":0.00024179649,"about_ca_topic_score_gemma":0.00028030158,"teacher_disagreement_score":0.001187488,"about_ca_system_score_codex":0.000511245,"about_ca_system_score_gemma":0.0004977185,"threshold_uncertainty_score":0.0042227507},"labels":[],"label_agreement":null},{"id":"W1881422607","doi":"10.1016/j.lungcan.2015.06.009","title":"IL1B gene polymorphisms, age and the risk of non-small cell lung cancer in a Chinese population","year":2015,"lang":"en","type":"article","venue":"Lung Cancer","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministry of Science and Technology; Ministry of Health, British Columbia; Fudan University; Research and Development; National Natural Science Foundation of China; National Science Foundation","keywords":"Medicine; Lung cancer; Oncology; Chinese population; Internal medicine; Gene; Genetics; Genotype; Biology","score_opus":0.006080338920320681,"score_gpt":0.25174813654559786,"score_spread":0.24566779762527718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1881422607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99944144,0.0001990762,0.00004595297,0.00003870381,0.0000072604357,0.0000032510522,0.00005542283,0.0000017910613,0.00020710306],"genre_scores_gemma":[0.9993926,0.0001097036,0.000042711803,0.000029494184,0.000016186761,0.0000048213365,0.00006122672,0.0000017402373,0.0003415527],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99980456,0.000036117257,0.000020937381,0.000057476715,0.00002833019,0.000052517833],"domain_scores_gemma":[0.9996947,0.00006277167,0.00007038749,0.00003349451,0.000038471004,0.0001001457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041217997,0.00045388713,0.0004759437,0.0006851393,0.0009536435,0.000514567,0.00032369964,0.0005359253,0.0020301223],"category_scores_gemma":[0.00064736494,0.0005250423,0.0006837209,0.0009520611,0.0004293916,0.0003743307,0.00024082145,0.0006463274,0.00021232096],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006026261,0.0001313864,0.9945662,0.000017789003,0.00017172436,0.0004102102,0.0003778035,0.00007495152,0.0021930968,0.0000632494,0.00009790496,0.001292928],"study_design_scores_gemma":[0.00002291352,0.00016067381,0.9983584,0.0000039319552,0.00015712762,0.00025699264,0.0002988206,0.00038254596,0.00013373749,0.000063353145,0.00015442347,0.0000070364463],"about_ca_topic_score_codex":0.025362192,"about_ca_topic_score_gemma":0.013903687,"teacher_disagreement_score":0.025362192,"about_ca_system_score_codex":0.0004374063,"about_ca_system_score_gemma":0.0006601083,"threshold_uncertainty_score":0.050429165},"labels":[],"label_agreement":null},{"id":"W1881442674","doi":"10.1074/jbc.m115.657874","title":"Structural Basis for Antibody Recognition of Lipid A","year":2015,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Lipid A; Antibody; Monoclonal antibody; Antigen; In vitro; Oligosaccharide; DNA; Chemistry; Biochemistry; Sepsis; Biology; Lipopolysaccharide; Immunology","score_opus":0.048525986393241696,"score_gpt":0.2891316219857399,"score_spread":0.2406056355924982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1881442674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9821165,0.0014435542,0.007753917,0.00043740435,0.00008559213,0.000049010443,0.0001841454,0.00010827374,0.007821639],"genre_scores_gemma":[0.996429,0.00026615715,0.0016051844,0.00024865873,0.000013210391,0.000013460066,0.0002443982,0.000007535486,0.001172437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988544,0.000023468325,0.000006962224,0.000025597561,0.000023331082,0.00003518829],"domain_scores_gemma":[0.99988973,0.000023461444,0.000022417318,0.000009056689,0.000022376158,0.000032955315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010915704,0.00028491073,0.00013437746,0.00017194511,0.00019023185,0.00021782961,0.00037772037,0.0004258911,0.0024755665],"category_scores_gemma":[0.00022424161,0.00012266371,0.00025679922,0.00008023745,0.00018468362,0.00018071267,0.00028748432,0.0005578572,0.00097632344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001572477,0.000081219914,0.0011402245,0.00005088685,0.0000117977725,0.00024082781,0.000026054438,0.0007920326,0.9928808,0.0019741054,0.00023566357,0.002408972],"study_design_scores_gemma":[0.00014469784,0.0015181605,0.016109733,0.00003428403,0.000048491194,0.0014692963,0.00009531419,0.019161062,0.9405583,0.0034617276,0.017373977,0.000025011312],"about_ca_topic_score_codex":0.0005760141,"about_ca_topic_score_gemma":0.00029837093,"teacher_disagreement_score":0.0024755665,"about_ca_system_score_codex":0.00033139266,"about_ca_system_score_gemma":0.00019912027,"threshold_uncertainty_score":0.008281589},"labels":[],"label_agreement":null},{"id":"W1882275176","doi":"10.4141/cjas2011-002","title":"cDNA cloning, characterization and expression analysis of toll-like receptor 4 gene in goose","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Goose; Complementary DNA; Biology; Gene; Cloning (programming); Rapid amplification of cDNA ends; Signal peptide; Amino acid; Molecular biology; Messenger RNA; Receptor; Toll-like receptor; Gene expression; Transmembrane domain; Molecular cloning; Genetics; Peptide sequence; Innate immune system","score_opus":0.016066151200284044,"score_gpt":0.22130565849287356,"score_spread":0.20523950729258952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1882275176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97042006,0.00475714,0.013667989,0.0005254662,0.00018299962,0.00024813955,0.0067508407,0.00017428838,0.0032730298],"genre_scores_gemma":[0.89384097,0.006787737,0.030641533,0.0003803046,0.00011312275,0.0002887638,0.04473159,0.00018581812,0.023030216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984777,0.000015759713,0.00001714117,0.00004052792,0.000031477986,0.000047336638],"domain_scores_gemma":[0.99981934,0.00004219836,0.000035789482,0.00002343211,0.000037693702,0.000041649735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015633242,0.0005869676,0.00051941053,0.00074498745,0.00044731246,0.00036232176,0.00039445714,0.00049564056,0.001873315],"category_scores_gemma":[0.00021093494,0.000431279,0.0008934001,0.0005334068,0.00039810166,0.00032741195,0.00041994543,0.00084152864,0.0016149913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016038476,0.00002931861,0.00028719023,0.00008661619,0.0000109947305,0.00022641853,0.000050384446,0.00010152374,0.9972308,0.00012920183,0.00007013504,0.0016170875],"study_design_scores_gemma":[0.00026312823,0.0018272578,0.06376525,0.00012672668,0.0005345525,0.0045593465,0.0008402512,0.0052477503,0.85679156,0.00089229067,0.06499766,0.00015424819],"about_ca_topic_score_codex":0.0018611,"about_ca_topic_score_gemma":0.0017871845,"teacher_disagreement_score":0.001873315,"about_ca_system_score_codex":0.00043388267,"about_ca_system_score_gemma":0.00039130638,"threshold_uncertainty_score":0.0062668324},"labels":[],"label_agreement":null},{"id":"W1882975800","doi":"10.1002/art.38520","title":"Brief Report: A Polymorphism in <i>TLR2</i> Is Associated With Arterial Thrombosis in a Multiethnic Population of Patients With Systemic Lupus Erythematosus","year":2014,"lang":"en","type":"article","venue":"Arthritis & Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute on Minority Health and Health Disparities; National Center for Research Resources; Weill Cornell Medical College; National Institutes of Health; Hospital for Special Surgery; National Institute of Arthritis and Musculoskeletal and Skin Diseases; University of Texas Health Science Center at Houston; National Center for Advancing Translational Sciences; University of Alabama; McGill University Health Centre; McGill University; Canadian Institutes of Health Research; Lupus Research Alliance; Rheumatology Research Foundation; Northwestern University; University of Alabama at Birmingham; Johns Hopkins University; Arthritis Foundation; University of California, San Francisco; Alliance for Lupus Research; American College of Rheumatology Research and Education Foundation","keywords":"Thrombosis; Medicine; Population; Polymorphism (computer science); Immunology; Internal medicine; Cardiology; Genotype; Genetics; Biology; Gene; Environmental health","score_opus":0.005084415518894852,"score_gpt":0.19916164649097337,"score_spread":0.19407723097207852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1882975800","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9358084,0.0417023,0.004232385,0.0059143407,0.0019488495,0.00009166444,0.0075196386,0.00026133645,0.002521027],"genre_scores_gemma":[0.9848969,0.005805709,0.0018441534,0.001119498,0.0026132793,0.000049638475,0.0023466672,0.000038562488,0.0012856487],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993667,0.00017911871,0.00009650048,0.00022684636,0.00009509468,0.000035783145],"domain_scores_gemma":[0.99667394,0.0011190627,0.001441507,0.0001887979,0.00037859226,0.00019808997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011780137,0.0006341185,0.0006978728,0.00046521772,0.00028350603,0.0007326838,0.00040531135,0.00077913405,0.003951207],"category_scores_gemma":[0.0032558274,0.00021112952,0.0009065778,0.0011783381,0.00022294396,0.00021449308,0.00027144095,0.0005323097,0.000493272],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009520318,0.00018643175,0.90030605,0.0027651212,0.014426121,0.0027773627,0.00020401551,0.0006052567,0.012029881,0.00015219004,0.014724687,0.04230254],"study_design_scores_gemma":[0.0011159789,0.0012391096,0.9578519,0.00022959946,0.016366694,0.008200343,0.00015705252,0.0014779026,0.0034150325,0.0004591672,0.009429697,0.000057610563],"about_ca_topic_score_codex":0.0010290733,"about_ca_topic_score_gemma":0.0006831257,"teacher_disagreement_score":0.003951207,"about_ca_system_score_codex":0.00016470242,"about_ca_system_score_gemma":0.0002441867,"threshold_uncertainty_score":0.013218164},"labels":[],"label_agreement":null},{"id":"W1888210466","doi":"10.1186/s13054-015-0981-y","title":"Common variants of NFE2L2 gene predisposes to acute respiratory distress syndrome in patients with severe sepsis","year":2015,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Instituto de Salud Carlos III; Fundación Ramón Areces","keywords":"ARDS; Medicine; Single-nucleotide polymorphism; Odds ratio; Linkage disequilibrium; Sepsis; Population; Internal medicine; Bioinformatics; Genetics; Gene; Genotype; Biology; Lung","score_opus":0.014857791496099023,"score_gpt":0.2667135313463517,"score_spread":0.25185573985025267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1888210466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989158,0.00036954397,0.00031510115,0.00004626409,0.000007724893,0.000006225878,0.00016434267,0.000004243814,0.00017078589],"genre_scores_gemma":[0.9994609,0.000078101,0.00018731438,0.000020261017,0.000014905325,0.0000062864906,0.00015476938,0.0000020543166,0.00007545764],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99948174,0.0001502258,0.00006280285,0.00017574703,0.000076630575,0.000052912746],"domain_scores_gemma":[0.99910444,0.00023577579,0.0003753044,0.00006557705,0.000092648756,0.00012621722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005140812,0.0006313839,0.0005447001,0.00059894274,0.0003939893,0.00044768525,0.00038367548,0.0005835117,0.0025100207],"category_scores_gemma":[0.0015556293,0.0001734042,0.0005456299,0.00072676275,0.00029344697,0.00020792353,0.0003621912,0.0004091242,0.00020878653],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004384918,0.000039680697,0.99414814,0.000025408435,0.0001460595,0.0010294348,0.000075753065,0.000080888276,0.0025773684,0.000033900003,0.000077432145,0.0013275003],"study_design_scores_gemma":[0.00003211933,0.00017414174,0.9943936,0.000016815038,0.00012726322,0.003844421,0.00017594545,0.00039584975,0.00042690188,0.00011283965,0.00029201497,0.000008130795],"about_ca_topic_score_codex":0.00092690624,"about_ca_topic_score_gemma":0.00068899046,"teacher_disagreement_score":0.0025100207,"about_ca_system_score_codex":0.00012755602,"about_ca_system_score_gemma":0.0002152864,"threshold_uncertainty_score":0.008396804},"labels":[],"label_agreement":null},{"id":"W1889825709","doi":"10.4049/jimmunol.179.10.7110","title":"Induction of IRAK-M Is Associated with Lipopolysaccharide Tolerance in a Human Endotoxemia Model","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lipopolysaccharide; Monocyte; In vivo; Whole blood; Cytokine; Tumor necrosis factor alpha; In vitro; Pharmacology; Ex vivo; Internal medicine; Endocrinology; Biology; Medicine; Immunology; Biochemistry","score_opus":0.01339506933328175,"score_gpt":0.24690527211868968,"score_spread":0.23351020278540793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1889825709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934813,0.00094805774,0.004915404,0.00005099912,0.000022022314,0.000070445065,0.00008176393,0.00006445602,0.00036565925],"genre_scores_gemma":[0.9946838,0.00081863924,0.0032528003,0.00005146545,0.00001976491,0.00012067163,0.00026363417,0.00000968737,0.0007795539],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998473,0.000042714,0.000015404266,0.000027609914,0.000031050033,0.000035846537],"domain_scores_gemma":[0.9998915,0.000013051249,0.00004294319,0.00001808463,0.000009654854,0.000024734227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026666696,0.00049651373,0.00043033223,0.00018383103,0.000107033826,0.00020264217,0.00011612966,0.00021747411,0.0011220734],"category_scores_gemma":[0.00015231337,0.00013844603,0.000256256,0.00012846699,0.00027139022,0.00018520492,0.00020675261,0.0007906977,0.000261746],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011541254,0.00021537814,0.0004966613,0.000049049857,0.00000796133,0.00016365445,0.00002486795,0.000071473514,0.99597126,0.000034300003,0.00003123876,0.0017799175],"study_design_scores_gemma":[0.00014193077,0.01243599,0.01763679,0.00001660107,0.0000611184,0.001784307,0.00006963883,0.0016712922,0.9645281,0.00010991077,0.0015318623,0.000012341836],"about_ca_topic_score_codex":0.00006672855,"about_ca_topic_score_gemma":0.000082191946,"teacher_disagreement_score":0.0011220734,"about_ca_system_score_codex":0.00013556861,"about_ca_system_score_gemma":0.00014294343,"threshold_uncertainty_score":0.0037537813},"labels":[],"label_agreement":null},{"id":"W1891734594","doi":"10.3748/wjg.v12.i14.2149","title":"Role of Toll-like receptors in health and diseases of gastrointestinal tract","year":2006,"lang":"en","type":"review","venue":"World Journal of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; National Research Council Canada","funders":"","keywords":"Immune system; Innate immune system; Biology; Gastrointestinal tract; Toll-like receptor; Pattern recognition receptor; Immunology; Receptor; Acquired immune system; Innate lymphoid cell; Pathogenic bacteria; Immunity; Microbiology; Bacteria; Genetics","score_opus":0.011857153864537949,"score_gpt":0.26972588456815744,"score_spread":0.2578687307036195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1891734594","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001293331,0.9986172,0.00011498681,0.00018784503,0.0002269018,0.0000033758586,0.000006786949,0.0000069535386,0.00070677174],"genre_scores_gemma":[0.0010298428,0.9975286,0.0002255795,0.00015239169,0.0003429619,0.000006069742,0.000021675763,9.507894e-7,0.00069192285],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99980646,0.00003649368,0.000031552692,0.00003123006,0.00007363312,0.000020552005],"domain_scores_gemma":[0.99974865,0.00008338773,0.000033564495,0.000009221605,0.00007452449,0.00005068131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006055759,0.0009204364,0.0014958961,0.0015976978,0.00030820642,0.0007063025,0.000942233,0.0013203695,0.0034376709],"category_scores_gemma":[0.00051984173,0.00019774534,0.00034703367,0.0014386415,0.0004966167,0.0012074439,0.0005610403,0.0015662085,0.0038817062],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014081135,0.000086908265,0.0003407654,0.0074049453,0.000059098937,0.0005721815,0.000060815004,0.00021315413,0.0027011626,0.002027831,0.023014413,0.9633779],"study_design_scores_gemma":[0.00004337332,0.00018778016,0.0019230511,0.0023198063,0.00009281813,0.0049116765,0.00009780828,0.000076523604,0.0008435759,0.002417449,0.9870646,0.000021546015],"about_ca_topic_score_codex":0.0005081267,"about_ca_topic_score_gemma":0.00060818985,"teacher_disagreement_score":0.0034376709,"about_ca_system_score_codex":0.00045477742,"about_ca_system_score_gemma":0.00078864384,"threshold_uncertainty_score":0.01150012},"labels":[],"label_agreement":null},{"id":"W1900975454","doi":"10.4049/jimmunol.0802189","title":"In Vivo Lipopolysaccharide Exposure of Human Blood Leukocytes Induces Cross-Tolerance to Multiple TLR Ligands","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TRIF; TLR4; In vivo; TLR2; Lipopolysaccharide; TLR5; Cytokine; Toll-like receptor; TLR3; Receptor; Immunology; Chemistry; Biology; Inflammation; Innate immune system; Biochemistry","score_opus":0.010788088357883745,"score_gpt":0.2643634972111021,"score_spread":0.25357540885321833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1900975454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939638,0.00175139,0.0029600419,0.00009435092,0.000046612044,0.0000757776,0.00017571902,0.00005058855,0.00088174496],"genre_scores_gemma":[0.99634403,0.0006782511,0.0011284398,0.0001648492,0.00003265009,0.000103492566,0.00054019503,0.000010607607,0.0009974795],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997198,0.00011134994,0.000029048697,0.000045250632,0.000038358983,0.000056102348],"domain_scores_gemma":[0.9998739,0.000023326786,0.00003706062,0.000027733997,0.0000113613605,0.000026634312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026671172,0.0004278082,0.00028903436,0.00015130457,0.000108936794,0.00025939755,0.000105934756,0.0002563645,0.0017922506],"category_scores_gemma":[0.00018523193,0.00014396771,0.00029578814,0.000120166726,0.00012846943,0.000102798775,0.00020581284,0.0005879861,0.0004893738],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007830418,0.00021066332,0.0003768347,0.00004775121,0.000012804902,0.00009747827,0.000029790777,0.00004326496,0.99580294,0.000054818767,0.00005995613,0.002480757],"study_design_scores_gemma":[0.00014939124,0.00768316,0.012066736,0.000018023278,0.00006644247,0.001056643,0.00005082771,0.00071043376,0.97567403,0.00009043538,0.0024264266,0.0000074767318],"about_ca_topic_score_codex":0.000118250704,"about_ca_topic_score_gemma":0.00010890512,"teacher_disagreement_score":0.0017922506,"about_ca_system_score_codex":0.00012197437,"about_ca_system_score_gemma":0.000116578354,"threshold_uncertainty_score":0.005995691},"labels":[],"label_agreement":null},{"id":"W1902370541","doi":"10.4049/jimmunol.181.12.8735","title":"Alveolar Macrophages from Septic Mice Promote Polymorphonuclear Leukocyte Transendothelial Migration via an Endothelial Cell Src Kinase/NADPH Oxidase Pathway","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Lawson Health Research Institute","funders":"","keywords":"NADPH oxidase; Cell biology; Proto-oncogene tyrosine-protein kinase Src; Chemistry; Chemokine; Superoxide; Immunology; Inflammation; Biology; Kinase; Biochemistry; Reactive oxygen species; Enzyme","score_opus":0.008498067270551388,"score_gpt":0.19764076471610256,"score_spread":0.18914269744555118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1902370541","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99155784,0.0018406247,0.0039392193,0.00029400602,0.00007085139,0.000049473947,0.00041640588,0.00023330835,0.0015983582],"genre_scores_gemma":[0.9916741,0.0012736728,0.002774823,0.00016589779,0.000041930733,0.00015120645,0.00085991283,0.000043082,0.0030153024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996737,0.000055215427,0.000036830897,0.00004684848,0.000077779696,0.00010958386],"domain_scores_gemma":[0.99978787,0.000015051442,0.00006804111,0.000025966261,0.00002581776,0.00007726453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030257218,0.00058504095,0.0004056865,0.00034224693,0.0001936309,0.0003119715,0.00019241105,0.00035346657,0.0015073516],"category_scores_gemma":[0.00013390023,0.00019844742,0.000330722,0.00010208956,0.00023764752,0.00022286747,0.00033688502,0.0010348053,0.00057525944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025940425,0.00006830798,0.00018472888,0.000041448748,0.000004838722,0.00007882132,0.000025920679,0.00003309742,0.9978387,0.00009331297,0.000066840716,0.0013045532],"study_design_scores_gemma":[0.00010204086,0.0011614681,0.0068809763,0.000020764712,0.000034022425,0.0005778043,0.00009718475,0.0010173639,0.98682076,0.00014669745,0.0031323163,0.000008676442],"about_ca_topic_score_codex":0.00018458822,"about_ca_topic_score_gemma":0.00031908462,"teacher_disagreement_score":0.0015073516,"about_ca_system_score_codex":0.0001622468,"about_ca_system_score_gemma":0.00021134542,"threshold_uncertainty_score":0.005042553},"labels":[],"label_agreement":null},{"id":"W1906902292","doi":"10.1111/j.1462-5822.2010.01466.x","title":"Impaired innate immune response and enhanced pathology during Citrobacter rodentium infection in mice lacking functional P-selectin","year":2010,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Genome British Columbia; Genome Prairie; Howard Hughes Medical Institute","keywords":"Citrobacter rodentium; Biology; Selectin; Immune system; Inflammation; Innate immune system; Immunology; Acquired immune system; Citrobacter; Microbiology; Enterobacteriaceae; Escherichia coli","score_opus":0.005162342796417557,"score_gpt":0.19564089955494618,"score_spread":0.19047855675852862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1906902292","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970945,0.0005964615,0.0011756292,0.00009189387,0.000013680171,0.000025592584,0.0003370824,0.000100406774,0.0005646826],"genre_scores_gemma":[0.9958473,0.00040807575,0.0015525166,0.0000675842,0.000010716753,0.00005357702,0.0003816804,0.000043089287,0.0016355434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963164,0.00006284774,0.000046431618,0.00010155273,0.000056597095,0.00010085146],"domain_scores_gemma":[0.99933904,0.00005911774,0.00029045678,0.000047910315,0.000030571384,0.00023283547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031223844,0.0012014105,0.00044700873,0.000720564,0.0002486764,0.00046407394,0.00031207653,0.00078189233,0.001307444],"category_scores_gemma":[0.0002740954,0.0005545811,0.00030500678,0.00018397639,0.00069372775,0.000508667,0.00030546277,0.0013542294,0.00036282538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070396747,0.00016243092,0.0006893867,0.000045262503,0.000008977387,0.00025360382,0.00003840767,0.00006626429,0.9972365,0.00010856564,0.000034156845,0.00065246416],"study_design_scores_gemma":[0.0003855293,0.0052653137,0.07815535,0.00008366031,0.00011509977,0.0060190344,0.0002709085,0.0026179776,0.9047167,0.00045323506,0.0018767671,0.000040461655],"about_ca_topic_score_codex":0.00042106485,"about_ca_topic_score_gemma":0.00051037635,"teacher_disagreement_score":0.001307444,"about_ca_system_score_codex":0.00039932365,"about_ca_system_score_gemma":0.00024870317,"threshold_uncertainty_score":0.004373908},"labels":[],"label_agreement":null},{"id":"W1909011356","doi":"10.1002/jlb.67.3.405","title":"Phosphatidylinositol 3-kinase and mTOR mediate lipopolysaccharide-stimulated nitric oxide production in macrophages via interferon-β","year":2000,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Inimex Pharmaceuticals (Canada)","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"P70-S6 Kinase 1; Phosphatidylinositol; Biology; Kinase; PI3K/AKT/mTOR pathway; Cell biology; Nitric oxide; Signal transduction; Endocrinology","score_opus":0.0073020074054001936,"score_gpt":0.23783029866764116,"score_spread":0.23052829126224098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1909011356","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9809357,0.010521017,0.0046384,0.00053197995,0.00011596645,0.000042144187,0.00015308039,0.00006743806,0.0029942933],"genre_scores_gemma":[0.9897395,0.0050307247,0.00284393,0.00014663434,0.00004733087,0.00007593241,0.00014098996,0.000009923152,0.0019651176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998523,0.00003673066,0.000015755319,0.000016881388,0.000036736856,0.000041578325],"domain_scores_gemma":[0.99993074,0.000007936923,0.000022921437,0.000005882514,0.000013176476,0.000019333102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024033929,0.00034908816,0.00024157827,0.00022448185,0.00017715227,0.00028506859,0.0001567541,0.0002526659,0.00059340696],"category_scores_gemma":[0.00016924606,0.00012812798,0.00026672648,0.00008792841,0.00024801743,0.00024264012,0.00027981747,0.0005787828,0.0002209794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073871494,0.000048630638,0.0005301686,0.00009344542,0.000011545282,0.00013399846,0.000024012623,0.00009591785,0.99436593,0.00039351432,0.000072092946,0.0034920804],"study_design_scores_gemma":[0.00010295492,0.0005599166,0.015229129,0.000031549163,0.00006615395,0.00042022511,0.00007537976,0.00279027,0.97560775,0.00080759084,0.004298876,0.00001016741],"about_ca_topic_score_codex":0.00023377736,"about_ca_topic_score_gemma":0.00041614546,"teacher_disagreement_score":0.00059340696,"about_ca_system_score_codex":0.00020332188,"about_ca_system_score_gemma":0.0002564716,"threshold_uncertainty_score":0.001985073},"labels":[],"label_agreement":null},{"id":"W191005351","doi":"10.4049/jimmunol.178.supp.35.36","title":"Identification of a regulatory region which controls inducible expression of the human CD200 gene (35.36)","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; University of New Brunswick; Toronto General Hospital; Canada Research Chairs; Toronto Western Hospital","funders":"","keywords":"Jurkat cells; Molecular biology; Biology; Regulatory sequence; Binding site; Gene; Gene expression; Promoter; Regulation of gene expression; Cell biology; Genetics; T cell","score_opus":0.013146018775526704,"score_gpt":0.24946018268080505,"score_spread":0.23631416390527835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W191005351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97277063,0.0022782779,0.01800781,0.0001670499,0.000092814254,0.00021156998,0.0039764373,0.00031291074,0.0021825263],"genre_scores_gemma":[0.97283787,0.0005354306,0.01648626,0.00023283697,0.000027677761,0.00012970778,0.0065753683,0.00007965052,0.003095125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984646,0.000018576895,0.000009030787,0.000058552516,0.000028848675,0.00003850173],"domain_scores_gemma":[0.9998319,0.00006066027,0.000031761814,0.00002395124,0.00001529611,0.00003643146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014300327,0.00024565976,0.00030257044,0.0003154354,0.00013648446,0.00023997863,0.00021461949,0.0003225853,0.0024698398],"category_scores_gemma":[0.00019124121,0.00023011805,0.0004411442,0.00019434487,0.00025281025,0.00007608383,0.00017298094,0.0005558345,0.0012525067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109434695,0.000026575795,0.00017066475,0.000028012193,0.000002196119,0.00007621412,0.000012056273,0.00004369048,0.99832433,0.00008995939,0.00005762608,0.0010591354],"study_design_scores_gemma":[0.000060771898,0.00032708858,0.024423115,0.000038764294,0.000028914383,0.0007602477,0.00003940859,0.0020128477,0.96535194,0.00016109746,0.0067808335,0.000015040291],"about_ca_topic_score_codex":0.00088562095,"about_ca_topic_score_gemma":0.001315592,"teacher_disagreement_score":0.0024698398,"about_ca_system_score_codex":0.0004175161,"about_ca_system_score_gemma":0.0003008503,"threshold_uncertainty_score":0.008262455},"labels":[],"label_agreement":null},{"id":"W1910519909","doi":"10.4049/jimmunol.180.10.6911","title":"Dual Role of NOX2 in Respiratory Syncytial Virus- and Sendai Virus-Induced Activation of NF-κB in Airway Epithelial Cells","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Saint-Luc; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Sendai virus; Chemokine; NADPH oxidase; Biology; Signal transduction; Paramyxoviridae; Phosphorylation; Proinflammatory cytokine; Mononegavirales; NF-κB; A549 cell; Virus; Transcription factor; Cell biology; Immunology; Inflammation; Cell culture; Reactive oxygen species; Gene","score_opus":0.012064138081710099,"score_gpt":0.22511071883979872,"score_spread":0.21304658075808863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1910519909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98521674,0.008540295,0.004070805,0.00015191639,0.0001038944,0.00003353252,0.00023267038,0.000034913654,0.0016152789],"genre_scores_gemma":[0.99446917,0.0019515413,0.0015326092,0.000066434826,0.00004090699,0.000048595673,0.00038586656,0.0000069043713,0.0014979482],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984777,0.000028007942,0.000015047749,0.000032621017,0.000042515774,0.00003400574],"domain_scores_gemma":[0.9999374,0.0000060300185,0.000013791206,0.000007546061,0.000009749082,0.0000253566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002484766,0.0003798554,0.0002551796,0.00016369259,0.0002409225,0.0003276152,0.00017797272,0.0002898755,0.0005739907],"category_scores_gemma":[0.000102375285,0.00012097497,0.0003726013,0.00013071657,0.00022780665,0.00035161522,0.00026964108,0.00035721966,0.00019100921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020893983,0.000028409433,0.00025282445,0.00006704275,0.000006278525,0.00013283912,0.000025439447,0.000024822337,0.99843997,0.0001909528,0.000018007988,0.00060454046],"study_design_scores_gemma":[0.000060376035,0.0004120389,0.025266184,0.000021116992,0.000050207287,0.0017452058,0.00014753098,0.0016043464,0.9647807,0.00038320856,0.0055140583,0.000014906084],"about_ca_topic_score_codex":0.0002028579,"about_ca_topic_score_gemma":0.00019984286,"teacher_disagreement_score":0.0005739907,"about_ca_system_score_codex":0.00019464751,"about_ca_system_score_gemma":0.00018864305,"threshold_uncertainty_score":0.0019202232},"labels":[],"label_agreement":null},{"id":"W1913299325","doi":"10.4049/jimmunol.178.1.463","title":"Differential Regulation of Cytokine Release and Leukocyte Migration by Lipopolysaccharide-Stimulated Primary Human Lung Alveolar Type II Epithelial Cells and Macrophages","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":209,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"","keywords":"Chemokine; Autocrine signalling; Cytokine; Macrophage; Lipopolysaccharide; Tumor necrosis factor alpha; Macrophage inflammatory protein; Alveolar macrophage; Chemistry; Cell biology; Biology; Inflammation; In vitro; Immunology; Molecular biology; Cell culture; Biochemistry","score_opus":0.004976564566888546,"score_gpt":0.2202174243064715,"score_spread":0.21524085973958296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1913299325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396,0.0028699613,0.0016355814,0.00005691524,0.000025817017,0.000050940216,0.0003138406,0.000030280169,0.0010566565],"genre_scores_gemma":[0.99383074,0.0014177158,0.0024424074,0.00009143328,0.00003321767,0.00015372576,0.0008057075,0.000009571243,0.0012155023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996519,0.00008318714,0.00003851451,0.00004254557,0.00007656508,0.0001074008],"domain_scores_gemma":[0.9998561,0.000032819593,0.000022659053,0.000021773258,0.000035095833,0.000031583284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002664225,0.00036620742,0.00034925507,0.00020990771,0.0001567405,0.0003511238,0.000121861485,0.0002076143,0.00091465114],"category_scores_gemma":[0.00021997247,0.00018280325,0.00029148703,0.00018830178,0.00020086719,0.00014907483,0.00023056871,0.00037435675,0.00046995722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038447598,0.000035202836,0.0006024839,0.000039570437,0.000004392202,0.00008475251,0.00003875508,0.000027480366,0.9979405,0.000024208564,0.000024036945,0.000794167],"study_design_scores_gemma":[0.00006887387,0.0014658222,0.03327043,0.000016909056,0.000026892187,0.00047280535,0.00017760678,0.00065133395,0.9618706,0.000059723094,0.001907842,0.000011037825],"about_ca_topic_score_codex":0.000327235,"about_ca_topic_score_gemma":0.00044774546,"teacher_disagreement_score":0.00091465114,"about_ca_system_score_codex":0.00019492554,"about_ca_system_score_gemma":0.0001441988,"threshold_uncertainty_score":0.003059864},"labels":[],"label_agreement":null},{"id":"W1914506150","doi":"10.1016/s0022-3565(24)29491-x","title":"Immune Stimulation by a CpG-Containing Oligodeoxynucleotide Is Enhanced When Encapsulated and Delivered in Lipid Particles","year":2001,"lang":"en","type":"article","venue":"Journal of Pharmacology and Experimental Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Inimex Pharmaceuticals (Canada)","funders":"","keywords":"Immune system; CpG Oligodeoxynucleotide; Immunogenicity; Tumor necrosis factor alpha; Cytokine; Chemistry; Molecular biology; CpG site; Interferon gamma; Immunology; Biology; Biochemistry; Gene expression","score_opus":0.016168133038809464,"score_gpt":0.29815425693273934,"score_spread":0.28198612389392985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1914506150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953754,0.00082251505,0.0024537505,0.00005517446,0.00003761696,0.000021420827,0.00004582087,0.000032365064,0.0011559307],"genre_scores_gemma":[0.996539,0.0003831087,0.0015395245,0.000055652083,0.000013929404,0.000019659088,0.000078840974,0.000013630602,0.0013566836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983716,0.00003525848,0.000010822157,0.000022715354,0.00003932857,0.000054718454],"domain_scores_gemma":[0.999859,0.0000448367,0.000029611378,0.000013948806,0.000018482797,0.00003416785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026172976,0.0003601007,0.00027954974,0.00015941577,0.00010515487,0.0002573669,0.00013911165,0.00041894903,0.0010645685],"category_scores_gemma":[0.00018772652,0.00019177183,0.000269228,0.000092191745,0.0002303683,0.00017321813,0.00027001408,0.00045912448,0.0003864799],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100902726,0.000008303178,0.00003487311,0.000014238599,0.0000018099032,0.000021623553,0.0000042960346,0.000023118604,0.99944276,0.000030247904,0.000006061096,0.0003117186],"study_design_scores_gemma":[0.000016492035,0.00020705786,0.00070853776,0.0000034271225,0.000008070811,0.00006339703,0.000004314765,0.00027526097,0.9983499,0.000017780381,0.00034299068,0.000002621941],"about_ca_topic_score_codex":0.00017471434,"about_ca_topic_score_gemma":0.0002428109,"teacher_disagreement_score":0.0010645685,"about_ca_system_score_codex":0.00017164141,"about_ca_system_score_gemma":0.00019011307,"threshold_uncertainty_score":0.003561318},"labels":[],"label_agreement":null},{"id":"W1916906447","doi":"10.1093/intimm/dxv030","title":"Involvement of the cytoplasmic cysteine-238 of CD40 in its up-regulation of CD23 expression and its enhancement of TLR4-triggered responses","year":2015,"lang":"en","type":"article","venue":"International Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Canadian Arthritis Network; Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"CD23; Cell biology; Innate immune system; CD40; TLR4; Signal transduction; Biology; Chemistry; Receptor; Antibody; Biochemistry; Immunology; Immunoglobulin E","score_opus":0.025303709538492643,"score_gpt":0.2665046752018867,"score_spread":0.24120096566339405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1916906447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99601525,0.0018437504,0.0007905701,0.00008123557,0.00002125518,0.000014994273,0.00013176871,0.000030252542,0.0010708447],"genre_scores_gemma":[0.9977221,0.00056731445,0.00058084185,0.000025851197,0.000009761869,0.000020762614,0.00013702645,0.0000052495657,0.00093103026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988794,0.000019296152,0.000008625175,0.000014598696,0.000026342213,0.000043205822],"domain_scores_gemma":[0.9999422,0.000006272028,0.000011873149,0.000006775189,0.000009708083,0.00002317089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010389869,0.00024906624,0.0001725974,0.00014794889,0.00016074418,0.00021739119,0.00012397661,0.00020509507,0.0014047086],"category_scores_gemma":[0.00010076597,0.00006256242,0.00021625542,0.000107336266,0.00015868508,0.00014793435,0.00019577061,0.00033591472,0.00025957145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018389137,0.000024481511,0.00014713035,0.000044312026,0.0000044806643,0.00013307987,0.000012871466,0.000041912674,0.9980331,0.000105473715,0.000034737684,0.0012343717],"study_design_scores_gemma":[0.000025654443,0.00018533769,0.0049270247,0.000006703552,0.00001703578,0.000482052,0.000044723838,0.00044026913,0.9906384,0.000100553334,0.0031272932,0.000004941056],"about_ca_topic_score_codex":0.00032585807,"about_ca_topic_score_gemma":0.00029406225,"teacher_disagreement_score":0.0014047086,"about_ca_system_score_codex":0.00025922645,"about_ca_system_score_gemma":0.00019231313,"threshold_uncertainty_score":0.0046991706},"labels":[],"label_agreement":null},{"id":"W1917892434","doi":"10.4049/jimmunol.164.3.1617","title":"Delineation of a CpG Phosphorothioate Oligodeoxynucleotide for Activating Primate Immune Responses In Vitro and In Vivo","year":2000,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":586,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute","keywords":"CpG Oligodeoxynucleotide; CpG site; In vivo; Immune system; Adjuvant; In vitro; Biology; Molecular biology; Immunology; Virology; DNA methylation; Gene; Gene expression; Biochemistry; Genetics","score_opus":0.00933588569244893,"score_gpt":0.2503434698357612,"score_spread":0.2410075841433123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1917892434","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97140956,0.0057540853,0.016298095,0.00013895302,0.00005202218,0.00026235884,0.00048357237,0.00014798106,0.005453438],"genre_scores_gemma":[0.96332633,0.004659585,0.027059415,0.00015207106,0.000042069194,0.00027390552,0.0010564676,0.000047344343,0.0033829235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997589,0.0000937378,0.000016243872,0.000043792337,0.00004044193,0.000047012258],"domain_scores_gemma":[0.99988747,0.000032386506,0.000016417112,0.000013442173,0.000019075485,0.000031202973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044574033,0.00046851023,0.00026524876,0.0003350881,0.00018325874,0.00031469288,0.00021651783,0.00038252104,0.0013259301],"category_scores_gemma":[0.00025091512,0.00024580923,0.00023992191,0.00013301529,0.00019304486,0.000092580616,0.00014387576,0.00035649454,0.00040206758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070469425,0.000020273681,0.00016597874,0.00006342384,0.000004574541,0.000032076965,0.00001409012,0.00009207877,0.997373,0.000079422076,0.000013824896,0.002070851],"study_design_scores_gemma":[0.000036614085,0.0019530177,0.003103442,0.00003100748,0.000060975974,0.0006209551,0.00002612215,0.0009285626,0.9850664,0.000097231954,0.008068526,0.0000071933055],"about_ca_topic_score_codex":0.0005745019,"about_ca_topic_score_gemma":0.0010855569,"teacher_disagreement_score":0.0013259301,"about_ca_system_score_codex":0.00025234115,"about_ca_system_score_gemma":0.00036659464,"threshold_uncertainty_score":0.004435718},"labels":[],"label_agreement":null},{"id":"W1919309518","doi":"10.1186/ar1394","title":"Differential induction of IL-1β and tumor necrosis factor by CD40 ligand or cellular contact with stimulated T cells depends on the degree of maturity of human monocytes","year":2004,"lang":"en","type":"article","venue":"Arthritis Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Arthritis Network; School of Medicine, University of California, San Diego; Menzies Institute for Medical Research; National Cancer Institute; Arthritis Society; University of North Carolina at Chapel Hill; Genentech; National Institutes of Health; Biogen; Lupus Research Institute; Pfizer; Natural Sciences and Engineering Research Council of Canada; Dutch Arthritis Association; Oesterreichische Nationalbank; Deutsche Forschungsgemeinschaft; Nuffield Foundation; Physiotherapy Foundation of Canada; Canadian Institutes of Health Research; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Lupus Research Alliance; Wellcome Trust; Newcastle University; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; Austrian Science Fund; Arthritis Foundation","keywords":"CD40; Tumor necrosis factor alpha; Monocyte; Cytokine; Cell biology; Macrophage; Chemistry; Membrane; Biology; Molecular biology; Immunology; Biochemistry; In vitro; Cytotoxic T cell","score_opus":0.056137467539041856,"score_gpt":0.2903273752872935,"score_spread":0.23418990774825166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1919309518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9626861,0.022939859,0.004209664,0.0005316406,0.0008476643,0.000094052884,0.0008843303,0.00013838794,0.007668361],"genre_scores_gemma":[0.97973835,0.008755622,0.0022808984,0.00027161354,0.00035715764,0.000065115295,0.0010386899,0.00004520154,0.007447302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910563,0.00021768633,0.000091074966,0.00013145522,0.00019251944,0.00026157981],"domain_scores_gemma":[0.9993647,0.00023879293,0.00010574878,0.00007383624,0.00009214306,0.0001247828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042611646,0.0004012404,0.0005114019,0.0005029018,0.00023664067,0.0014733811,0.00014779126,0.00033708537,0.006293575],"category_scores_gemma":[0.00071761524,0.00029199186,0.0004579118,0.00040261148,0.00030842656,0.000523591,0.00049019366,0.0008389877,0.0026692448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014668356,0.00008328423,0.0020183192,0.00017702994,0.000009396499,0.0002628081,0.000135836,0.00004480237,0.98628104,0.0003025855,0.0004217239,0.008796252],"study_design_scores_gemma":[0.00011198899,0.0017117477,0.06413535,0.0000863109,0.00004952903,0.001938954,0.0006648157,0.00048785663,0.9185017,0.00077849237,0.011511233,0.000022089533],"about_ca_topic_score_codex":0.00022366489,"about_ca_topic_score_gemma":0.00036370568,"teacher_disagreement_score":0.006293575,"about_ca_system_score_codex":0.00028464626,"about_ca_system_score_gemma":0.00033921463,"threshold_uncertainty_score":0.02105409},"labels":[],"label_agreement":null},{"id":"W1923025591","doi":"10.1152/ajplung.00068.2014","title":"Leukocyte-specific protein 1 regulates neutrophil recruitment in acute lung inflammation","year":2015,"lang":"en","type":"article","venue":"American Journal of Physiology-Lung Cellular and Molecular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Division of Graduate Education; Natural Sciences and Engineering Research Council of Canada","keywords":"Inflammation; Bronchoalveolar lavage; Lipopolysaccharide; Chemokine; Lung; Immunology; Myeloperoxidase; Pathology; Medicine; Internal medicine","score_opus":0.011970775900759375,"score_gpt":0.23919264778699265,"score_spread":0.22722187188623327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1923025591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9807242,0.014240427,0.0023116851,0.00037066324,0.000084928506,0.00004339441,0.00052160944,0.00018903913,0.0015140137],"genre_scores_gemma":[0.98853856,0.0067495285,0.0011299388,0.00017523841,0.000034798722,0.00007256053,0.0005522147,0.000017821993,0.0027291907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986684,0.000023875562,0.000008218528,0.00003341372,0.000025332378,0.000042263517],"domain_scores_gemma":[0.99987364,0.000008090965,0.00006271015,0.000004479699,0.000013142429,0.0000379351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012376624,0.00047774686,0.0003183323,0.0002749756,0.00021169372,0.0003549334,0.00018530578,0.00034894273,0.0012729501],"category_scores_gemma":[0.00013252067,0.00016165829,0.0002596722,0.00015826288,0.0003017451,0.00023844688,0.0002615943,0.00070264965,0.0004476349],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006546603,0.00007822412,0.0018696085,0.00021528473,0.000012233848,0.0002775617,0.00003167646,0.00014726506,0.9920866,0.00021620527,0.00030129726,0.004109457],"study_design_scores_gemma":[0.0001762169,0.0019214058,0.21749836,0.00010621043,0.00015186935,0.0024554115,0.00029439828,0.003587973,0.7584462,0.0010751667,0.014244397,0.0000423046],"about_ca_topic_score_codex":0.00022147805,"about_ca_topic_score_gemma":0.0003088335,"teacher_disagreement_score":0.0012729501,"about_ca_system_score_codex":0.00033489583,"about_ca_system_score_gemma":0.00019812677,"threshold_uncertainty_score":0.004258454},"labels":[],"label_agreement":null},{"id":"W1924340117","doi":"10.4049/jimmunol.173.2.1327","title":"Immunoregulatory Role of Nitric Oxide in Kilham Rat Virus-Induced Autoimmune Diabetes in DR-BB Rats","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Pathogenesis; Immune system; Proinflammatory cytokine; Chemokine; Nitric oxide; Virus; Inflammation; Lipopolysaccharide; CD8; Chemistry; Immunology; Biology; Endocrinology","score_opus":0.006468341929901536,"score_gpt":0.21269371485162566,"score_spread":0.20622537292172413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1924340117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99815565,0.0007856501,0.00047718844,0.000047265316,0.000018677212,0.000013231831,0.00006817326,0.000028723143,0.00040540754],"genre_scores_gemma":[0.99655116,0.0007832256,0.0010356315,0.000058105245,0.000022428714,0.000041564137,0.00020335648,0.000013642602,0.0012909007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997689,0.000051640818,0.0000237809,0.00005856953,0.000039037568,0.00005792788],"domain_scores_gemma":[0.9995951,0.000029354505,0.00014466952,0.000041194224,0.000033548717,0.00015605926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020296297,0.0007470232,0.000404913,0.0005831287,0.0002143146,0.00029210685,0.00022120832,0.0004275149,0.0008613068],"category_scores_gemma":[0.0001762981,0.0002551499,0.00025035522,0.00015996194,0.00035559028,0.0003211676,0.00022102069,0.0008769071,0.0002274726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014049873,0.00024730992,0.0008980751,0.000044548637,0.000009945682,0.00018407544,0.000037036734,0.000039463237,0.99553216,0.000099726705,0.00001818557,0.0014843777],"study_design_scores_gemma":[0.00039939847,0.0077280644,0.05328209,0.00003513116,0.00013391333,0.0016519626,0.00029452523,0.0015167504,0.9322876,0.00028921527,0.0023436507,0.000037684487],"about_ca_topic_score_codex":0.00050637836,"about_ca_topic_score_gemma":0.0005724565,"teacher_disagreement_score":0.0008613068,"about_ca_system_score_codex":0.00024087356,"about_ca_system_score_gemma":0.00019508322,"threshold_uncertainty_score":0.0028814077},"labels":[],"label_agreement":null},{"id":"W1929164122","doi":"10.1111/j.1750-3639.2011.00490.x","title":"Crawling Phagocytes Recruited in the Brain Vasculature after Pertussis Toxin Exposure through IL6, ICAM1 and ITGαM","year":2011,"lang":"en","type":"article","venue":"Brain Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Multiple Sclerosis Society of Canada; Amgen","keywords":"Tumor necrosis factor alpha; Lipopolysaccharide; Immunology; Cell biology; Pertussis toxin; Biology; Cholera toxin; Population; Downregulation and upregulation; Inflammation; Microbiology; Medicine; Signal transduction; Gene","score_opus":0.023643114315177776,"score_gpt":0.23979967948191727,"score_spread":0.2161565651667395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1929164122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975454,0.0008301972,0.0009256777,0.000057154113,0.000007973412,0.000008731604,0.00012082552,0.00002048102,0.0004834692],"genre_scores_gemma":[0.9955883,0.00080007786,0.0012355433,0.00007168982,0.000013422173,0.00004013435,0.00036766235,0.000009928076,0.0018733157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985445,0.000018359966,0.000007184554,0.000034191493,0.000028564953,0.000057234967],"domain_scores_gemma":[0.99992096,0.00000855313,0.000028685336,0.0000075535113,0.000009133824,0.000025050353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008618093,0.00021126041,0.00026076185,0.0002768404,0.00017546577,0.00026064352,0.000094823066,0.00021424495,0.00075687346],"category_scores_gemma":[0.000099308476,0.0001275632,0.00016807466,0.00013032899,0.00018473295,0.00015112535,0.00019332833,0.0004166206,0.00028071608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006438518,0.0000040714535,0.000223046,0.000010978457,0.0000014446669,0.00003935438,0.000014501532,0.000005135959,0.999308,0.000013795451,0.000008729839,0.00030670493],"study_design_scores_gemma":[0.00001909934,0.0002735939,0.05879135,0.000013793338,0.000033002307,0.00052088714,0.00014600137,0.00040267222,0.9382594,0.00010453182,0.0014306643,0.0000049577184],"about_ca_topic_score_codex":0.00030981435,"about_ca_topic_score_gemma":0.00045681314,"teacher_disagreement_score":0.00075687346,"about_ca_system_score_codex":0.00019150962,"about_ca_system_score_gemma":0.00009830992,"threshold_uncertainty_score":0.0025319457},"labels":[],"label_agreement":null},{"id":"W1930867397","doi":"10.1046/j.1471-4159.2001.00603.x","title":"Circulating cell wall components derived from gram‐negative, not gram‐positive, bacteria cause a profound induction of the gene‐encoding Toll‐like receptor 2 in the CNS","year":2001,"lang":"en","type":"article","venue":"Journal of Neurochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":186,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"TLR2; Lipoteichoic acid; Biology; Toll-like receptor; Innate immune system; Receptor; TLR4; Cell biology; Transcription factor; Peptidoglycan; Signal transduction; Proinflammatory cytokine; Molecular biology; Immunology; Gene; Inflammation; Biochemistry; Bacteria; Genetics","score_opus":0.026242791854081206,"score_gpt":0.2367183101028759,"score_spread":0.21047551824879468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1930867397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551904,0.002191251,0.0015248951,0.00006401139,0.000035842335,0.000019225019,0.00017345027,0.00004436113,0.00042797605],"genre_scores_gemma":[0.99101627,0.0025311683,0.0026898473,0.00008339686,0.00003198671,0.00007542323,0.00043276185,0.000020833613,0.0031182324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986243,0.000016657474,0.000012427553,0.000034861845,0.000039040697,0.000034593555],"domain_scores_gemma":[0.9998839,0.000011830874,0.0000328636,0.000012519058,0.000013364371,0.000045507913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014095081,0.0005166981,0.00030559473,0.00028938506,0.00011527538,0.00031873348,0.00011778568,0.00028290474,0.0011534359],"category_scores_gemma":[0.000121906225,0.00023174011,0.00022356404,0.00011586674,0.00038863198,0.00026571043,0.00017649101,0.0007305503,0.00029942644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008060465,0.000012076851,0.00009164582,0.000023225743,0.000002193108,0.000038642716,0.000005882752,0.000007533595,0.99929523,0.000017009226,0.000009230583,0.0004167406],"study_design_scores_gemma":[0.00001844613,0.0007663596,0.008374442,0.000012283904,0.000020725996,0.00037418067,0.000044895216,0.00020231857,0.98961323,0.00005256883,0.00051573577,0.0000048009088],"about_ca_topic_score_codex":0.0003621168,"about_ca_topic_score_gemma":0.00064001436,"teacher_disagreement_score":0.0011534359,"about_ca_system_score_codex":0.00023509972,"about_ca_system_score_gemma":0.0003362497,"threshold_uncertainty_score":0.003858626},"labels":[],"label_agreement":null},{"id":"W1938259528","doi":"10.1139/cjm-2015-0063","title":"Mucosal and systemic immune responses induced by a single time vaccination strategy in mice","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Immune system; Vaccination; Immunology; Biology; Microbiology; Virology","score_opus":0.016309127355125328,"score_gpt":0.2213389769929938,"score_spread":0.20502984963786847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1938259528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98520327,0.0021942083,0.007335085,0.0003984616,0.00021342334,0.00047259947,0.0011603786,0.00042137495,0.002601327],"genre_scores_gemma":[0.9781953,0.0025086962,0.010285348,0.00043244497,0.00009941055,0.00065910496,0.0011245613,0.000061233855,0.006633881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929917,0.000105223786,0.00006244347,0.0002109655,0.00011768422,0.00020455534],"domain_scores_gemma":[0.9996314,0.000047118378,0.00012441607,0.00006468313,0.000029596986,0.000102782215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006539798,0.001330508,0.0006125461,0.0011449117,0.00031761505,0.00045240123,0.0005796772,0.0014126726,0.0013352216],"category_scores_gemma":[0.00020423176,0.00051139656,0.00088735035,0.00028344578,0.00061087287,0.0007471186,0.0003302777,0.0026265087,0.00045272004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007128945,0.0006579512,0.00014911997,0.00008259545,0.00001050503,0.000054058168,0.000042544158,0.00017277065,0.99619365,0.00016915209,0.000081067614,0.0016736933],"study_design_scores_gemma":[0.00028347046,0.016307365,0.0025809812,0.000037682476,0.00007206447,0.0002713917,0.00004574554,0.001644868,0.9763509,0.00016931655,0.002214327,0.000021852455],"about_ca_topic_score_codex":0.00067694834,"about_ca_topic_score_gemma":0.0009289233,"teacher_disagreement_score":0.0014126726,"about_ca_system_score_codex":0.0004526068,"about_ca_system_score_gemma":0.0004552575,"threshold_uncertainty_score":0.004466772},"labels":[],"label_agreement":null},{"id":"W1938526746","doi":"10.1055/s-0037-1613434","title":"Molecular mechanisms of leukocyte recruitment: organ-specific mechanisms of action","year":2003,"lang":"en","type":"article","venue":"Thrombosis and Haemostasis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Action (physics); Medicine; Mechanism of action; Immunology; Computational biology; Biology; Genetics; In vitro","score_opus":0.09021685049853202,"score_gpt":0.3058279055524522,"score_spread":0.2156110550539202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1938526746","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17511052,0.6562056,0.12826099,0.017317986,0.0026296235,0.000882746,0.0006768136,0.0012993215,0.017616458],"genre_scores_gemma":[0.6671682,0.26775306,0.037737526,0.0040443204,0.0028726931,0.0012069688,0.0005993814,0.00007415831,0.018543705],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992587,0.00018117578,0.000046993755,0.00017023769,0.00015803217,0.00018475954],"domain_scores_gemma":[0.9996872,0.0000484382,0.00009168046,0.000032608346,0.00006844738,0.00007178357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011354759,0.0011068438,0.0012870505,0.0007264765,0.0005994081,0.0023091622,0.0009988782,0.0019265824,0.0032827398],"category_scores_gemma":[0.00051611016,0.0003710505,0.00081955903,0.00038596275,0.0011291185,0.002399608,0.0012374128,0.0018581685,0.0014477425],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012812553,0.0004272672,0.0032915368,0.004321703,0.0001669139,0.0014899891,0.0005752059,0.0014703869,0.72071415,0.049596064,0.007850818,0.20881476],"study_design_scores_gemma":[0.00058582594,0.006493327,0.055448033,0.0019886927,0.0007493936,0.008112066,0.0013364776,0.012944641,0.5816456,0.06392472,0.2664472,0.0003240775],"about_ca_topic_score_codex":0.00020659203,"about_ca_topic_score_gemma":0.00021112004,"teacher_disagreement_score":0.0032827398,"about_ca_system_score_codex":0.0009039135,"about_ca_system_score_gemma":0.00054564,"threshold_uncertainty_score":0.010981798},"labels":[],"label_agreement":null},{"id":"W1942691337","doi":"10.4049/jimmunol.178.9.5735","title":"Protein Kinase D Interaction with TLR5 Is Required for Inflammatory Signaling in Response to Bacterial Flagellin","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre; University of British Columbia","funders":"","keywords":"TLR5; Flagellin; Cell biology; HEK 293 cells; Phosphorylation; Protein kinase C; Kinase; Protein kinase A; Molecular biology; Signal transduction; Biology; Immunoprecipitation; p38 mitogen-activated protein kinases; GSK-3; Biochemistry; TLR4; Gene; TLR2","score_opus":0.01234532280429349,"score_gpt":0.2541695487054065,"score_spread":0.241824225901113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1942691337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99481446,0.0012688194,0.0019795652,0.00018985811,0.00004842284,0.000021490026,0.00065905135,0.00006178945,0.00095657445],"genre_scores_gemma":[0.995839,0.00039755864,0.0011985361,0.000077998375,0.000007573865,0.000023493112,0.0011073168,0.000015386806,0.0013331115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970776,0.000050168885,0.000038803348,0.000058361547,0.000055545348,0.000089347806],"domain_scores_gemma":[0.99979323,0.00002208642,0.000066331624,0.000021324371,0.0000146280145,0.000082379825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001758158,0.0003250693,0.00026204038,0.00022945725,0.00038793372,0.00045088684,0.00027990845,0.00032274684,0.0023891316],"category_scores_gemma":[0.00022842892,0.00021552938,0.0004168949,0.00015494484,0.00023309917,0.00024355101,0.00033471486,0.0005080555,0.0008325815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003849797,0.000046455574,0.0005285531,0.00006573465,0.000008027855,0.00012708009,0.000012798611,0.00007659127,0.99791986,0.00015497867,0.00007329343,0.0006016753],"study_design_scores_gemma":[0.000060433453,0.00019647778,0.029499128,0.00002364246,0.00003189576,0.0007234324,0.000099627934,0.0029615134,0.9620902,0.00012401452,0.0041745617,0.000014975728],"about_ca_topic_score_codex":0.0009844088,"about_ca_topic_score_gemma":0.0013273029,"teacher_disagreement_score":0.0023891316,"about_ca_system_score_codex":0.00080517464,"about_ca_system_score_gemma":0.00046491783,"threshold_uncertainty_score":0.007992446},"labels":[],"label_agreement":null},{"id":"W1944381048","doi":"10.4049/jimmunol.176.2.1195","title":"Activation of TLR-9 Induces IL-8 Secretion through Peroxynitrite Signaling in Human Neutrophils","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Peroxynitrite; CpG site; Molecular biology; Chemistry; DNA methylation; Intracellular; Secretion; DNA; Cell biology; Biology; Superoxide; Gene expression; Biochemistry; Gene; Enzyme","score_opus":0.014360960280408305,"score_gpt":0.24563731694605342,"score_spread":0.2312763566656451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1944381048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962914,0.0011948604,0.0014145124,0.0001052514,0.000019769514,0.00005095317,0.00021274145,0.000018236167,0.00069237815],"genre_scores_gemma":[0.99606115,0.000670382,0.001411686,0.0001042146,0.000013861993,0.00008093803,0.00046835165,0.0000035357132,0.001185859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998221,0.00006158737,0.000016071957,0.000026390413,0.000033783577,0.000040109124],"domain_scores_gemma":[0.9999536,0.000011084294,0.000011915778,0.0000061423334,0.0000068998097,0.000010258747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018379123,0.00023480291,0.00021775714,0.00008525743,0.000074967305,0.00018017844,0.0000973614,0.00023306962,0.0014234736],"category_scores_gemma":[0.0001681253,0.000100064004,0.00017975458,0.00006196133,0.00009604415,0.0001154011,0.00021076726,0.0003507847,0.00040029557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039139323,0.00007476332,0.00043241185,0.000056067223,0.000005463464,0.0001243085,0.000031646607,0.000031125503,0.9969799,0.000028758834,0.000043613087,0.0018004476],"study_design_scores_gemma":[0.00016092171,0.001741045,0.015620402,0.000028724751,0.00002856151,0.0008371817,0.0001094933,0.0010809617,0.9771881,0.00009000165,0.0031088942,0.000005800376],"about_ca_topic_score_codex":0.0002421908,"about_ca_topic_score_gemma":0.00028702506,"teacher_disagreement_score":0.0014234736,"about_ca_system_score_codex":0.00012475908,"about_ca_system_score_gemma":0.00015639326,"threshold_uncertainty_score":0.004761994},"labels":[],"label_agreement":null},{"id":"W1948285947","doi":"10.4049/jimmunol.0900021","title":"The Single IgG IL-1–Related Receptor Controls TLR Responses in Differentiated Human Intestinal Epithelial Cells","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital","funders":"National Cancer Institute; National Heart, Lung, and Blood Institute","keywords":"Chemokine; Biology; Flagellin; Immunology; Receptor; Gene silencing; Inflammation; Cell biology; Gene","score_opus":0.009221651678126472,"score_gpt":0.2309500697865437,"score_spread":0.22172841810841723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1948285947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99150676,0.0023433275,0.0033399488,0.00013200981,0.000052641746,0.00004640096,0.0007671263,0.00013074327,0.001681103],"genre_scores_gemma":[0.9906143,0.0011427486,0.0037780073,0.00009877595,0.000017042044,0.000057355643,0.0013899485,0.000031249394,0.0028705597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962306,0.000060289425,0.000060657836,0.000094110204,0.000088802204,0.00007305311],"domain_scores_gemma":[0.99982315,0.00002652728,0.00003642815,0.000051886855,0.000028341123,0.000033619184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002468047,0.00024574407,0.00030473413,0.00021336305,0.00013379316,0.00047008466,0.00022271238,0.00029801187,0.0011178934],"category_scores_gemma":[0.0001524277,0.00020593671,0.00029894552,0.00024205714,0.0002661897,0.00018154441,0.00019863692,0.00062298,0.0009191683],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058869682,0.000014383047,0.00008315886,0.000016857586,0.0000012757805,0.000020122065,0.000012090562,0.000015113838,0.999398,0.000019662388,0.000014376382,0.00034605575],"study_design_scores_gemma":[0.000033367698,0.00035884857,0.007723823,0.000005948823,0.00002055816,0.00025198562,0.0000714911,0.0009784731,0.98703384,0.000027221064,0.0034874913,0.0000068995378],"about_ca_topic_score_codex":0.0006458465,"about_ca_topic_score_gemma":0.00091544935,"teacher_disagreement_score":0.0011178934,"about_ca_system_score_codex":0.00033083456,"about_ca_system_score_gemma":0.0002480789,"threshold_uncertainty_score":0.0037397146},"labels":[],"label_agreement":null},{"id":"W1948441138","doi":"10.4049/jimmunol.181.10.6859","title":"Dendritic Cell Differentiation Induced by a Self-Peptide Derived from Apolipoprotein E","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Robarts Clinical Trials; Western University","funders":"Howard Hughes Medical Institute","keywords":"CD86; Cell biology; CD11c; Dendritic cell; Biology; T cell; Immune system; Antigen-presenting cell; Splenocyte; Signal transduction; CD40; Follicular dendritic cells; Flow cytometry; p38 mitogen-activated protein kinases; Cytotoxic T cell; Molecular biology; Immunology; MAPK/ERK pathway; In vitro","score_opus":0.009279927540141454,"score_gpt":0.20102882665179456,"score_spread":0.1917488991116531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1948441138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975975,0.0004147208,0.0005465572,0.00004751332,0.00002828877,0.000020989635,0.00014998035,0.000028105831,0.0011662894],"genre_scores_gemma":[0.9959858,0.000576974,0.0010711751,0.00008773772,0.0000139243275,0.000035552268,0.00038634927,0.000009313398,0.0018332367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999187,0.000011103542,0.0000073066735,0.000012523327,0.000020293122,0.00003013148],"domain_scores_gemma":[0.9999298,0.000012966405,0.000015294327,0.000008302583,0.000009654865,0.000024026156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000082687206,0.00020361405,0.00016896824,0.0001431423,0.00009605697,0.00014474778,0.000079616126,0.00016779956,0.0005919724],"category_scores_gemma":[0.00009204374,0.00008702079,0.00013690117,0.00009593733,0.0001238568,0.00006541315,0.00012941322,0.0005404521,0.0002812559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014322503,0.000041198993,0.00019752655,0.00002430676,0.0000014824079,0.00012534639,0.000010321233,0.000018823459,0.998478,0.00003351762,0.00003280078,0.00089349714],"study_design_scores_gemma":[0.00007391036,0.0003641899,0.009749491,0.000011474552,0.000010908123,0.00042956218,0.00003153325,0.0005658887,0.98643506,0.0000782443,0.0022459913,0.0000037355655],"about_ca_topic_score_codex":0.00025770158,"about_ca_topic_score_gemma":0.0003349718,"teacher_disagreement_score":0.0005919724,"about_ca_system_score_codex":0.00015543375,"about_ca_system_score_gemma":0.00015332946,"threshold_uncertainty_score":0.0019803047},"labels":[],"label_agreement":null},{"id":"W1951243282","doi":"10.1017/cbo9780511546198.047","title":"Endothelium: A Critical Detector of Lipopolysaccharide","year":2007,"lang":"en","type":"book-chapter","venue":"Cambridge University Press eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipopolysaccharide; Microbiology; Bacteria; Bacterial outer membrane; Gram-negative bacteria; Secretion; Biology; Lipid A; Haemophilus influenzae; Pathogenic bacteria; Salmonella; Chemistry; Immunology; Escherichia coli; Antibiotics; Biochemistry; Gene","score_opus":0.024486108966512186,"score_gpt":0.22672362980090507,"score_spread":0.2022375208343929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1951243282","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031349648,0.5472214,0.02958963,0.024295071,0.011337457,0.00013413797,0.00048812717,0.0010129251,0.3545717],"genre_scores_gemma":[0.16685395,0.23668392,0.020888347,0.014293882,0.0048457254,0.00018780066,0.00048562247,0.00026653524,0.55549425],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988747,0.000016634682,0.0000035455605,0.000024840501,0.00004624479,0.000021234486],"domain_scores_gemma":[0.9999335,0.000013508268,0.00000641076,0.000003840571,0.000019442761,0.000023358276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019139772,0.00038190745,0.00039008012,0.00041558253,0.0005811661,0.002263774,0.0006501343,0.0012132562,0.007846551],"category_scores_gemma":[0.00014942905,0.00023933518,0.00017052528,0.0003302865,0.0007869232,0.0016382702,0.00084585254,0.0022891795,0.0050462903],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027552448,0.00013033375,0.0005175153,0.0014464605,0.000024487772,0.0023180689,0.0011471356,0.00019217365,0.33419406,0.3105771,0.1207738,0.22840342],"study_design_scores_gemma":[0.000014604958,0.00009613631,0.000901128,0.00027861932,0.000015641303,0.0024272043,0.0002604307,0.0001790467,0.047637735,0.019083876,0.92908335,0.000022329275],"about_ca_topic_score_codex":0.00022708083,"about_ca_topic_score_gemma":0.00025588294,"teacher_disagreement_score":0.007846551,"about_ca_system_score_codex":0.00056233566,"about_ca_system_score_gemma":0.00051728653,"threshold_uncertainty_score":0.02624935},"labels":[],"label_agreement":null},{"id":"W1951507118","doi":"10.4049/jimmunol.180.6.3729","title":"Identification of RNA Sequence Motifs Stimulating Sequence-Specific TLR8-Dependent Immune Responses","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":314,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Canadian Pharmacists Association","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service","keywords":"TLR7; Immune system; Biology; RNA; Innate immune system; Cell biology; Molecular biology; Immunology; Toll-like receptor; Gene; Genetics","score_opus":0.04399622455842885,"score_gpt":0.2773638023804603,"score_spread":0.23336757782203146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1951507118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98545504,0.0030847215,0.008366582,0.0001012286,0.000034888377,0.00012526437,0.00031903049,0.00007351114,0.002439758],"genre_scores_gemma":[0.9738178,0.0015503162,0.020855002,0.00024243048,0.00005034947,0.00017951502,0.0017276829,0.000023968661,0.0015528258],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981076,0.00004901023,0.000014381346,0.00003760462,0.00004518415,0.000043046406],"domain_scores_gemma":[0.9998061,0.000061030998,0.000041939507,0.00001654011,0.000037340636,0.00003711845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019523878,0.0002970174,0.0002890101,0.00036256033,0.00012861812,0.0002802537,0.00019234943,0.00033865677,0.0018516602],"category_scores_gemma":[0.00031959367,0.00012558923,0.00029260913,0.000120482255,0.00012862303,0.000159448,0.00023663572,0.0003532946,0.00091346144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012089521,0.000030779644,0.00026711755,0.000052566073,0.000003846823,0.00005334505,0.000006130941,0.00008187391,0.99598616,0.00005577073,0.000028904904,0.003312597],"study_design_scores_gemma":[0.000058286743,0.0011534158,0.0058608116,0.000022030976,0.00003224547,0.0011285951,0.000038922582,0.0017055675,0.98595434,0.0001515595,0.0038789283,0.00001536553],"about_ca_topic_score_codex":0.000044546123,"about_ca_topic_score_gemma":0.00011150062,"teacher_disagreement_score":0.0018516602,"about_ca_system_score_codex":0.00014526893,"about_ca_system_score_gemma":0.00015256657,"threshold_uncertainty_score":0.006194353},"labels":[],"label_agreement":null},{"id":"W1954407400","doi":"10.1111/j.1365-2613.2010.00742.x","title":"Expression of toll-like receptor 9 in lungs of pigs, dogs and cattle","year":2010,"lang":"en","type":"article","venue":"International Journal of Experimental Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"TLR9; Innate immune system; Immunostaining; Toll-Like Receptor 9; Biology; TLR4; Receptor; Antibody; Toll-like receptor; Immune system; Pathology; Blot; Immunohistochemistry; Immunology; Gene expression; Medicine; Gene; Biochemistry","score_opus":0.00652132991367261,"score_gpt":0.2707345454370346,"score_spread":0.264213215523362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1954407400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99765104,0.0006739566,0.00027782092,0.00005146527,0.000010217619,0.00000780229,0.00019213744,0.000006818616,0.0011286127],"genre_scores_gemma":[0.9977654,0.00043395994,0.0004356501,0.000058416997,0.000012175558,0.0000146445145,0.00040095483,0.0000044989206,0.0008742033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997967,0.000045409226,0.000014780818,0.00004784311,0.0000374367,0.000057929705],"domain_scores_gemma":[0.9997651,0.000070976814,0.00006921016,0.000011296784,0.000029523135,0.000053878673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032690572,0.00015753253,0.0001778901,0.00081135164,0.000240962,0.000421981,0.00011161146,0.00044736406,0.0016087651],"category_scores_gemma":[0.0004290197,0.00027268575,0.0001694387,0.00024405078,0.00031043848,0.00031213963,0.00015517564,0.00025420365,0.0003226179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019012007,0.00012703065,0.17942634,0.00032003951,0.0000764043,0.002630035,0.00082719297,0.00020653727,0.80331546,0.00037654958,0.0003648758,0.010428322],"study_design_scores_gemma":[0.000053610358,0.0009791659,0.9372839,0.000058658243,0.00007972994,0.007980386,0.0016214019,0.0006797681,0.047556713,0.00024199353,0.0034439103,0.000020758158],"about_ca_topic_score_codex":0.0006805009,"about_ca_topic_score_gemma":0.000855292,"teacher_disagreement_score":0.0016087651,"about_ca_system_score_codex":0.00024502745,"about_ca_system_score_gemma":0.00013568475,"threshold_uncertainty_score":0.0053818226},"labels":[],"label_agreement":null},{"id":"W1963520725","doi":"10.1128/jvi.76.1.427-431.2002","title":"Interleukin-1α Released from Epithelial Cells after Adenovirus Type 37 Infection Activates Intercellular Adhesion Molecule 1 Expression on Human Vascular Endothelial Cells","year":2002,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa; Dalhousie University","funders":"","keywords":"Biology; Cell adhesion molecule; Endothelial stem cell; Intercellular adhesion molecule; Intercellular Adhesion Molecule-1; Inflammation; Endothelium; Cell biology; Cell adhesion; Extravasation; Immunology; Molecular biology; Cell; In vitro","score_opus":0.014438874574157748,"score_gpt":0.23244095890158128,"score_spread":0.21800208432742355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963520725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99318105,0.0037170833,0.0008870454,0.000084956606,0.00006845204,0.000022955079,0.00036623844,0.00003278003,0.0016394161],"genre_scores_gemma":[0.99289507,0.0027877074,0.0007444691,0.00005672152,0.00002280126,0.000017768685,0.0008019969,0.0000065091135,0.0026668578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980396,0.00003677743,0.000014921751,0.00002062885,0.0000379579,0.00008581537],"domain_scores_gemma":[0.9999088,0.00002700818,0.000011765931,0.000021688318,0.000015895956,0.000014864015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016205246,0.00035218522,0.00021764486,0.00023707449,0.00014686574,0.00058668683,0.000077352,0.0001903095,0.0022725652],"category_scores_gemma":[0.00022542065,0.00015161275,0.00026404267,0.00021917252,0.00017686601,0.00020072857,0.00014811149,0.00035520943,0.0008058966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031663195,0.000043121592,0.0007784623,0.00007079994,0.000007358509,0.0001648069,0.00008133456,0.000050397855,0.99535817,0.00018453026,0.0001198359,0.0028245721],"study_design_scores_gemma":[0.00011339028,0.0008052415,0.021375466,0.00003631312,0.00004445673,0.00057774666,0.00027842674,0.0008404179,0.9679161,0.0002765634,0.0077250684,0.0000108176755],"about_ca_topic_score_codex":0.0010469756,"about_ca_topic_score_gemma":0.00081597606,"teacher_disagreement_score":0.0022725652,"about_ca_system_score_codex":0.00041505691,"about_ca_system_score_gemma":0.00021291252,"threshold_uncertainty_score":0.007602513},"labels":[],"label_agreement":null},{"id":"W1963716219","doi":"10.1139/y07-038","title":"5-HT<sub>2A</sub> serotoninergic receptor in the locus coeruleus participates in the first phase of lipopolysaccharide-induced fever","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Locus coeruleus; Serotonergic; Lipopolysaccharide; Receptor; Endocrinology; 5-HT receptor; Internal medicine; Serotonin; Chemistry; Medicine; Biology; Central nervous system","score_opus":0.02066557123243737,"score_gpt":0.2877108624093518,"score_spread":0.26704529117691445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963716219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982175,0.0007015093,0.00065279624,0.000034703702,0.0000043319624,0.000008496369,0.00003127937,0.000014195669,0.00033506542],"genre_scores_gemma":[0.99887234,0.00023699434,0.0003727662,0.00002176545,0.0000048644824,0.000009095801,0.000047473553,0.0000027412364,0.0004320073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994624,0.000010998562,0.000003360917,0.0000062257427,0.000009778229,0.000023463484],"domain_scores_gemma":[0.999884,0.000014930875,0.000046104902,0.00000816911,0.000015116704,0.00003156005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007819062,0.00012866854,0.00022727664,0.00013886527,0.00010914381,0.00015228665,0.00008362082,0.0001690522,0.0007875301],"category_scores_gemma":[0.000110951856,0.00007316199,0.0001606371,0.00004350202,0.00018427765,0.00009725182,0.0000887566,0.00020523454,0.00016015684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031115857,0.000019961615,0.001689709,0.000021625603,0.000008362647,0.0001513693,0.000020675263,0.000040645686,0.99641955,0.000050903524,0.000016306078,0.0012497344],"study_design_scores_gemma":[0.000114383416,0.0028519367,0.3760717,0.000029160552,0.000067836474,0.0015841684,0.00019503033,0.0030515438,0.61496747,0.00027363922,0.0007766027,0.00001667323],"about_ca_topic_score_codex":0.0016346049,"about_ca_topic_score_gemma":0.0022511007,"teacher_disagreement_score":0.0016346049,"about_ca_system_score_codex":0.00024183569,"about_ca_system_score_gemma":0.00012713853,"threshold_uncertainty_score":0.0032501817},"labels":[],"label_agreement":null},{"id":"W1963804886","doi":"10.1038/sj.gene.6364157","title":"Differential cytokine genotype frequencies among Canadian Aboriginal and Caucasian populations","year":2004,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biology; Genotype; Genetics; Differential (mechanical device); Allele frequency; Evolutionary biology; Gene","score_opus":0.01265751613572882,"score_gpt":0.23848556219406836,"score_spread":0.22582804605833953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963804886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985331,0.00015481251,0.00007116423,0.000062879524,0.0000067239475,0.00000854918,0.00028470173,0.0000036138179,0.0008744226],"genre_scores_gemma":[0.9983683,0.00016711788,0.00013754558,0.00005242309,0.0000069200823,0.000010419906,0.00016250923,0.000006470175,0.0010882707],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991511,0.000100901954,0.000053220498,0.00018039857,0.00018912117,0.00032515873],"domain_scores_gemma":[0.9993074,0.00010142021,0.000090920556,0.000037886944,0.0002911395,0.00017130312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047268567,0.00035993286,0.00048731448,0.0019330427,0.003138893,0.0011417712,0.00060517725,0.000550123,0.0040691462],"category_scores_gemma":[0.0017708552,0.000293623,0.00036664863,0.0022649493,0.00097624154,0.00020710361,0.00046273388,0.0004447552,0.00033528364],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001135388,0.00007798215,0.9609953,0.00006168684,0.0001406415,0.0007529066,0.013777342,0.00010256858,0.011612948,0.00041891963,0.0006058126,0.010318492],"study_design_scores_gemma":[0.000022079343,0.00010491989,0.9919635,0.000019751895,0.00006185063,0.00050016877,0.0056933737,0.00012833017,0.0004192815,0.00010489338,0.0009617423,0.000020142274],"about_ca_topic_score_codex":0.8713286,"about_ca_topic_score_gemma":0.8774746,"teacher_disagreement_score":0.12867141,"about_ca_system_score_codex":0.0032426561,"about_ca_system_score_gemma":0.0033490371,"threshold_uncertainty_score":0.25885832},"labels":[],"label_agreement":null},{"id":"W1963925952","doi":"10.1038/sj.thj.6200088","title":"Rapid in vivo induction of leukocyte tissue factor mRNA and protein synthesis following low dose endotoxin administration to rabbits","year":2001,"lang":"en","type":"article","venue":"The Hematology Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"In vivo; Tissue factor; Disseminated intravascular coagulation; Sepsis; Platelet; Lipopolysaccharide; Messenger RNA; Medicine; Peripheral blood mononuclear cell; Internal medicine; Immunology; Coagulation; Andrology; Pharmacology; Biology; In vitro; Biochemistry","score_opus":0.01676275036129114,"score_gpt":0.25625589133564985,"score_spread":0.23949314097435873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1963925952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98821604,0.0017195783,0.0076077585,0.00024995508,0.000101573416,0.000100824975,0.00043180602,0.00022927916,0.0013432463],"genre_scores_gemma":[0.98894113,0.001031497,0.003839841,0.0001489088,0.000105056686,0.00016328642,0.0007360902,0.000107552034,0.0049267006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994411,0.00011198332,0.00005271623,0.00012208697,0.00008224486,0.00018998151],"domain_scores_gemma":[0.9981658,0.00059148495,0.0005040795,0.00032321265,0.00013211608,0.00028346822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072848593,0.0010050362,0.0008902801,0.001039828,0.00043430828,0.000737,0.00048457808,0.0009175014,0.0014532738],"category_scores_gemma":[0.0010428727,0.0006348193,0.0007122183,0.00051215076,0.001756121,0.0008476651,0.00033866093,0.0021143407,0.00077880145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036732836,0.00022741995,0.00023751268,0.000055796427,0.000010696304,0.000114324495,0.00007905338,0.000110412366,0.9930403,0.00023136486,0.000048531543,0.0021713367],"study_design_scores_gemma":[0.00014554222,0.0039385334,0.0016586352,0.000011407239,0.00003572013,0.00012398872,0.00005200064,0.00039001057,0.9929028,0.00013986409,0.00059007335,0.000011243761],"about_ca_topic_score_codex":0.0010326215,"about_ca_topic_score_gemma":0.0013689037,"teacher_disagreement_score":0.0014532738,"about_ca_system_score_codex":0.0006679425,"about_ca_system_score_gemma":0.0005927676,"threshold_uncertainty_score":0.0048617125},"labels":[],"label_agreement":null},{"id":"W1964088440","doi":"10.1186/cc5428","title":"Changes in sublingual microvascular flow during experimental human endotoxemia","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Microcirculation; Sepsis; Lipopolysaccharide; Perfusion; Oxygen delivery; Pharmacology; Immunology; Anesthesia; Intensive care medicine; Cardiology; Internal medicine; Oxygen","score_opus":0.013784423778970796,"score_gpt":0.3037640735584463,"score_spread":0.2899796497794755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964088440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972314,0.0009729981,0.0012541336,0.00003318607,0.000026186977,0.000052299212,0.00010053891,0.000031698153,0.00029770803],"genre_scores_gemma":[0.99771106,0.0007306746,0.0007899293,0.0000690542,0.000034942877,0.00011943335,0.00019654684,0.0000073535334,0.00034097588],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983895,0.000041324492,0.0000093404005,0.000035088033,0.000029027786,0.00004627616],"domain_scores_gemma":[0.9997708,0.000046209152,0.00007803936,0.000026320244,0.000021408248,0.000057110665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037985775,0.00030972308,0.00055287057,0.00030953242,0.0001670741,0.0002512244,0.00011810802,0.00037914232,0.0013412328],"category_scores_gemma":[0.00040821606,0.000119035954,0.00019186549,0.00021597907,0.00044136104,0.00035024955,0.00020808895,0.0007576571,0.00014962224],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009884228,0.0004411166,0.0025942582,0.00013462146,0.000031580068,0.0006839629,0.00016468749,0.00024694504,0.97556823,0.00013247228,0.000108042914,0.010009839],"study_design_scores_gemma":[0.00051080907,0.028110718,0.19369179,0.000046237375,0.00029461336,0.002272016,0.00027275307,0.003409705,0.7681039,0.00028709878,0.0029409444,0.00005930297],"about_ca_topic_score_codex":0.00028471794,"about_ca_topic_score_gemma":0.00022564127,"teacher_disagreement_score":0.0013412328,"about_ca_system_score_codex":0.00022220756,"about_ca_system_score_gemma":0.0001292895,"threshold_uncertainty_score":0.004486859},"labels":[],"label_agreement":null},{"id":"W1964273667","doi":"10.1002/glia.20512","title":"Bacteria and PAMPs activate nuclear factor κB and Gro production in a subset of olfactory ensheathing cells and astrocytes but not in Schwann cells","year":2007,"lang":"en","type":"article","venue":"Glia","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Olfactory ensheathing glia; Cell biology; Microglia; Neuroglia; Innate immune system; Borrelia burgdorferi; Chemokine; Olfactory system; Immunology; Immune system; Olfactory bulb; Neuroscience; Inflammation; Central nervous system; Antibody","score_opus":0.012888286603420226,"score_gpt":0.20948139610441222,"score_spread":0.19659310950099199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964273667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99708015,0.0006911424,0.00070101366,0.000034057037,0.000026935168,0.000020014932,0.00016494472,0.000021919155,0.0012597597],"genre_scores_gemma":[0.995363,0.0006128759,0.0011713133,0.000079086465,0.00002101683,0.00006961873,0.00039488493,0.000007319225,0.0022809538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998492,0.000014841062,0.0000119955275,0.00002122521,0.000039923172,0.00006274355],"domain_scores_gemma":[0.99990714,0.00001117868,0.00001882369,0.000007939082,0.000012142053,0.000042712847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009022488,0.0004099665,0.00020977225,0.00017807304,0.0001318486,0.00019060406,0.00006711074,0.00020341204,0.0013524462],"category_scores_gemma":[0.00011177656,0.00012017177,0.00030622148,0.000100199686,0.00016218322,0.00012542742,0.00019916073,0.0003118787,0.0002827734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015266448,0.000024870647,0.0003610786,0.00003994019,0.0000027141434,0.00007354937,0.000017599237,0.000016371503,0.99865216,0.000016273652,0.000015734653,0.0006271058],"study_design_scores_gemma":[0.00006191249,0.0010234938,0.050286394,0.00002330948,0.000028058981,0.00082063413,0.00034661932,0.0007838786,0.9445483,0.00010562187,0.001962096,0.000009713724],"about_ca_topic_score_codex":0.0004593626,"about_ca_topic_score_gemma":0.00081885647,"teacher_disagreement_score":0.0013524462,"about_ca_system_score_codex":0.00009146434,"about_ca_system_score_gemma":0.00013776074,"threshold_uncertainty_score":0.00452441},"labels":[],"label_agreement":null},{"id":"W1964450844","doi":"10.1002/eji.200526088","title":"Lipopolysaccharide primes neutrophils for a rapid response to IL-10","year":2005,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Biology; Lipopolysaccharide; STAT protein; Signal transduction; Phosphorylation; Cytokine; Activator (genetics); Messenger RNA; Receptor; STAT3; Molecular biology; Interleukin 8; Cell biology; Immunology; Gene; Biochemistry","score_opus":0.011905117751721234,"score_gpt":0.23836131225367735,"score_spread":0.22645619450195612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964450844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99547994,0.0014428509,0.0017208477,0.00011658867,0.00007794587,0.000059123377,0.00013238467,0.000086140506,0.00088410964],"genre_scores_gemma":[0.9963238,0.0005867942,0.001209136,0.00010012481,0.000030105495,0.00007854526,0.0002317998,0.000012700897,0.0014270112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998078,0.000055200508,0.000015732712,0.000026493148,0.00003460667,0.00006022189],"domain_scores_gemma":[0.99981755,0.00005249338,0.00004542178,0.000025131558,0.0000183838,0.00004106123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002568815,0.00030449397,0.00023046101,0.00009127762,0.0000598422,0.00031578806,0.00013227499,0.00018585112,0.0019606052],"category_scores_gemma":[0.00027835878,0.00012014598,0.00015989774,0.00004888668,0.00017301973,0.00016970777,0.00023497491,0.00044799608,0.00053565874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051863096,0.000027559207,0.00018902791,0.000029423929,0.0000019433207,0.00004816253,0.000014254382,0.00002665046,0.9978549,0.000049933835,0.00003583732,0.0012037063],"study_design_scores_gemma":[0.00014082312,0.0019859425,0.017447636,0.000035550525,0.000023428232,0.00045336733,0.00008172072,0.001151136,0.97435457,0.00016718711,0.0041478025,0.000010945024],"about_ca_topic_score_codex":0.00014261124,"about_ca_topic_score_gemma":0.00026211058,"teacher_disagreement_score":0.0019606052,"about_ca_system_score_codex":0.00021625354,"about_ca_system_score_gemma":0.00019310304,"threshold_uncertainty_score":0.006558895},"labels":[],"label_agreement":null},{"id":"W1964500998","doi":"10.1016/j.biocel.2014.02.002","title":"TPL2 signalling: From Toll-like receptors-mediated ERK1/ERK2 activation to Cystic Fibrosis lung disease","year":2014,"lang":"en","type":"review","venue":"The International Journal of Biochemistry & Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Cystic fibrosis; Inflammation; Innate immune system; Immunology; Receptor; Kinase; Immune system; Biology; Toll-like receptor; Signal transduction; Pattern recognition receptor; p38 mitogen-activated protein kinases; Cancer research; Medicine; Protein kinase A; Cell biology; Genetics","score_opus":0.011553448654695287,"score_gpt":0.27241866192573705,"score_spread":0.2608652132710418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964500998","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022793905,0.99727565,0.00022621934,0.00045727752,0.00075515005,0.0000053590225,0.00003346056,0.000011893935,0.0010070861],"genre_scores_gemma":[0.0011952831,0.9960984,0.00021974149,0.00033790167,0.0006095912,0.00000842687,0.00006803484,0.000002651698,0.0014598925],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986637,0.000013674418,0.000019138877,0.000025946318,0.000051153318,0.000023664212],"domain_scores_gemma":[0.9998211,0.000044845525,0.000034326687,0.0000068208883,0.000057844063,0.000035160097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047340078,0.0009534859,0.0011677552,0.0012597649,0.00025553798,0.0011673082,0.0009695908,0.0011791319,0.0032193046],"category_scores_gemma":[0.00038633053,0.0002678664,0.0004094564,0.0012201559,0.00053560233,0.0013919664,0.0010408781,0.0021502953,0.003109057],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020147882,0.00008417161,0.00016049128,0.009109732,0.00009895863,0.00031787035,0.000045760866,0.00037705168,0.0055528404,0.0029093442,0.04515471,0.9359876],"study_design_scores_gemma":[0.00003637963,0.0000840902,0.00070143805,0.0014399192,0.00007670453,0.0008651784,0.00004597619,0.00010928872,0.0015064119,0.0015051181,0.99360883,0.000020691594],"about_ca_topic_score_codex":0.00041366453,"about_ca_topic_score_gemma":0.000930633,"teacher_disagreement_score":0.0032193046,"about_ca_system_score_codex":0.0005701054,"about_ca_system_score_gemma":0.0008181336,"threshold_uncertainty_score":0.010769665},"labels":[],"label_agreement":null},{"id":"W1964721809","doi":"10.1097/ccm.0b013e3181ce4aaa","title":"Nuclear factor-κB activation by edema inhibits intestinal contractile activity","year":2010,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Edema; Medicine; Intestinal mucosa; Endocrinology; Phosphorylation; Internal medicine; Myosin light-chain kinase; Myosin; Pathology; Cell biology; Biology","score_opus":0.011945939752626821,"score_gpt":0.28328739621318094,"score_spread":0.27134145646055413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964721809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862889,0.00787731,0.0040848264,0.0001786732,0.00007897829,0.0000330866,0.00030530395,0.00010032489,0.0010525384],"genre_scores_gemma":[0.9938892,0.0030159324,0.0014826886,0.00007889996,0.000027430287,0.000056873858,0.000325388,0.000016527858,0.0011070428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999821,0.000027942924,0.0000108899385,0.00003610015,0.00004558763,0.000058593425],"domain_scores_gemma":[0.99983644,0.000023711214,0.00006910706,0.00001397179,0.00001804432,0.00003874825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020833808,0.00043144042,0.00035076632,0.00020280782,0.00015016909,0.00024471135,0.00019478546,0.00018189251,0.0027987782],"category_scores_gemma":[0.00022397024,0.00010827276,0.0002770136,0.00013401214,0.00028545424,0.00020575926,0.00018172835,0.00040944997,0.0004653503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006868241,0.000099454846,0.0002865066,0.00013589718,0.0000096299145,0.000033514338,0.000014205243,0.000042360236,0.9967411,0.000036560534,0.000038372193,0.00187555],"study_design_scores_gemma":[0.00016425739,0.0028465898,0.019575141,0.00006916896,0.000065560715,0.00038051384,0.0001452967,0.0014900377,0.9716879,0.00016637359,0.0033993677,0.000009795904],"about_ca_topic_score_codex":0.00021702256,"about_ca_topic_score_gemma":0.00044563046,"teacher_disagreement_score":0.0027987782,"about_ca_system_score_codex":0.0001725084,"about_ca_system_score_gemma":0.00022668343,"threshold_uncertainty_score":0.009362817},"labels":[],"label_agreement":null},{"id":"W1964821585","doi":"10.1371/journal.pone.0054586","title":"The Herpes Simplex Virus 1-Encoded Envelope Glycoprotein B Activates NF-κB through the Toll-Like Receptor 2 and MyD88/TRAF6-Dependent Signaling Pathway","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; McMaster University","funders":"National Key Research and Development Program of China; Major State Basic Research Development Program of China; National Natural Science Foundation of China","keywords":"TLR2; HEK 293 cells; Biology; Innate immune system; Proinflammatory cytokine; Toll-like receptor; Cell biology; CD14; Transfection; Herpes simplex virus; Tumor necrosis factor alpha; Receptor; Immune system; Cell culture; Virology; Immunology; Inflammation; Virus; Biochemistry","score_opus":0.024227138504429882,"score_gpt":0.20879380609435313,"score_spread":0.18456666758992324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964821585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9624218,0.020278215,0.009271862,0.00039604388,0.00027365587,0.0000905891,0.0015098264,0.00029353081,0.005464512],"genre_scores_gemma":[0.9821498,0.006374185,0.004266418,0.00017162973,0.000045694935,0.000086747335,0.001906653,0.000022475013,0.004976459],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997571,0.000042169184,0.000021145515,0.00004315343,0.00007069852,0.00006580985],"domain_scores_gemma":[0.9999255,0.000007603023,0.000028287883,0.000008521497,0.000010400608,0.000019802874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015489166,0.0006248111,0.00024555085,0.00025470852,0.00020349992,0.00034710628,0.00015390424,0.00032363238,0.002060437],"category_scores_gemma":[0.00013525898,0.00021713784,0.00050380523,0.00018858029,0.00017880568,0.00030264113,0.00039873197,0.0007452882,0.0007686459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021457091,0.000038366095,0.00038975463,0.0002156578,0.000018162138,0.00011735514,0.000032455755,0.000056916393,0.9964079,0.00015334749,0.00016560465,0.0021898258],"study_design_scores_gemma":[0.00018053794,0.0006116269,0.034801494,0.000107053565,0.0000595552,0.0033998378,0.00029422034,0.0043670353,0.9280421,0.00064626,0.027453166,0.00003703739],"about_ca_topic_score_codex":0.0004345754,"about_ca_topic_score_gemma":0.0004148987,"teacher_disagreement_score":0.002060437,"about_ca_system_score_codex":0.0002930466,"about_ca_system_score_gemma":0.0002292541,"threshold_uncertainty_score":0.00689286},"labels":[],"label_agreement":null},{"id":"W1964906621","doi":"10.1016/j.chom.2012.04.012","title":"Amino Acid Starvation Induced by Invasive Bacterial Pathogens Triggers an Innate Host Defense Program","year":2012,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":366,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; University of Michigan; Burroughs Wellcome Fund","keywords":"Biology; Innate immune system; Host (biology); Microbiology; Starvation; Amino acid; Defence mechanisms; Biochemistry; Immunology; Ecology; Immune system; Gene","score_opus":0.013792271366875717,"score_gpt":0.23544560824104482,"score_spread":0.2216533368741691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964906621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99218595,0.0028273505,0.0018034495,0.00025407947,0.00010991632,0.000037402886,0.00031120764,0.00010013971,0.0023704865],"genre_scores_gemma":[0.99337125,0.0010510151,0.0017794848,0.00017115807,0.000046633773,0.000047680333,0.0005135883,0.000022532755,0.0029966328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983597,0.000025033132,0.000012947766,0.000029065652,0.000039745733,0.000057221572],"domain_scores_gemma":[0.99979824,0.000023858924,0.00004353451,0.000022851396,0.0000334635,0.00007808147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017632787,0.0004055483,0.0004282066,0.00021802036,0.00025677474,0.0004401418,0.00013260434,0.00031950776,0.001442291],"category_scores_gemma":[0.00013925432,0.00015162477,0.0003610945,0.00011761443,0.00025311534,0.00027567885,0.00054099766,0.0005878208,0.0004419753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048465756,0.000019962252,0.0002894482,0.000022360904,0.0000038735693,0.0000909593,0.000009363162,0.00001561799,0.9983108,0.000051665873,0.000046086923,0.00065523654],"study_design_scores_gemma":[0.00010326215,0.001122008,0.10026066,0.000042325428,0.000036491772,0.0009928521,0.00031191704,0.0018681348,0.8911252,0.00046590506,0.0036489393,0.000022291388],"about_ca_topic_score_codex":0.00030773194,"about_ca_topic_score_gemma":0.00094812654,"teacher_disagreement_score":0.001442291,"about_ca_system_score_codex":0.00041569187,"about_ca_system_score_gemma":0.00037974297,"threshold_uncertainty_score":0.0048249364},"labels":[],"label_agreement":null},{"id":"W1965064177","doi":"10.1074/jbc.m604958200","title":"Contribution of Interferon-β to the Murine Macrophage Response to the Toll-like Receptor 4 Agonist, Lipopolysaccharide","year":2006,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Lipopolysaccharide; Toll-like receptor; Agonist; Macrophage; Interferon; Receptor; Chemistry; Immunology; Innate immune system; Medicine; In vitro; Biochemistry","score_opus":0.008700375731794401,"score_gpt":0.23334114328916009,"score_spread":0.22464076755736567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965064177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99315226,0.0031825253,0.001877784,0.0001049497,0.000046838435,0.000024518553,0.00041226062,0.000040818315,0.0011580205],"genre_scores_gemma":[0.992459,0.0029969432,0.0017955485,0.00012847684,0.000047071193,0.00006770505,0.0006178915,0.000018461245,0.0018689089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998535,0.000030149922,0.000013756437,0.000030395955,0.000036535825,0.000035622998],"domain_scores_gemma":[0.9998834,0.000019161595,0.000039502927,0.000012417945,0.000020657895,0.000024890389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001475907,0.0005379023,0.00021188415,0.0002738788,0.00009881944,0.0002978045,0.0000977538,0.0002601031,0.00056759507],"category_scores_gemma":[0.00016410329,0.0001872351,0.00018361886,0.00011238949,0.00020156341,0.00013038419,0.00018115173,0.00041893002,0.00025786133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002709574,0.000016261474,0.0008739791,0.000035324323,0.0000043699392,0.000043049706,0.000012515877,0.000049367176,0.996754,0.000036643705,0.00001679307,0.0018867097],"study_design_scores_gemma":[0.000044570726,0.00059892307,0.058390595,0.000047102654,0.00009105931,0.0005014274,0.00012977881,0.0018054667,0.9349723,0.00031152333,0.003095175,0.0000121088515],"about_ca_topic_score_codex":0.00014722765,"about_ca_topic_score_gemma":0.00014476861,"teacher_disagreement_score":0.00056759507,"about_ca_system_score_codex":0.0002038526,"about_ca_system_score_gemma":0.00013366551,"threshold_uncertainty_score":0.0018987656},"labels":[],"label_agreement":null},{"id":"W1965271250","doi":"10.1016/j.amjsurg.2005.03.038","title":"Intraoperative splanchnic hypoperfusion, increased intestinal permeability, down-regulation of monocyte class II major histocompatibility complex expression, exaggerated acute phase response, and sepsis","year":2005,"lang":"en","type":"article","venue":"The American Journal of Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University","keywords":"Medicine; Splanchnic; Sepsis; Perfusion; Systemic inflammatory response syndrome; Acidosis; Immune system; Monocyte; Gastroenterology; Internal medicine; Intestinal permeability; Immunology; Hemodynamics","score_opus":0.025569960430502622,"score_gpt":0.28396025530076796,"score_spread":0.2583902948702653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965271250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981869,0.0007963822,0.0004980373,0.00013451875,0.00003945276,0.0000102839385,0.000028546563,0.000013180582,0.0002927277],"genre_scores_gemma":[0.99876297,0.0003746405,0.0003447789,0.000073137344,0.000076497796,0.000021640668,0.000074325304,0.0000030108984,0.0002690043],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998325,0.000052860592,0.00001710172,0.000019656629,0.000033117634,0.00004474624],"domain_scores_gemma":[0.9991615,0.00012161177,0.0003609363,0.000066087145,0.000027886408,0.0002620976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037778498,0.000558171,0.000432669,0.00024086254,0.00019962841,0.0004336904,0.00014778561,0.0004933357,0.0011977404],"category_scores_gemma":[0.0007332919,0.00025567907,0.00024119463,0.00018431245,0.00059459015,0.00037736926,0.00024735028,0.0017292629,0.00010352604],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07990689,0.0023413515,0.064193636,0.0005288737,0.00020102136,0.005877891,0.00021150925,0.0007562214,0.8196246,0.0010001643,0.0006304971,0.024727337],"study_design_scores_gemma":[0.0017182047,0.028736422,0.786329,0.00008607395,0.00040010837,0.017117238,0.00047692272,0.005786883,0.15563492,0.001834209,0.0018100505,0.000069944464],"about_ca_topic_score_codex":0.0001832107,"about_ca_topic_score_gemma":0.00026210083,"teacher_disagreement_score":0.0011977404,"about_ca_system_score_codex":0.0003281457,"about_ca_system_score_gemma":0.00044338938,"threshold_uncertainty_score":0.004006803},"labels":[],"label_agreement":null},{"id":"W1965318611","doi":"10.1371/journal.pone.0057138","title":"p62/SQSTM1 Enhances NOD2-Mediated Signaling and Cytokine Production through Stabilizing NOD2 Oligomerization","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; Universität zu Köln","keywords":"NOD2; Muramyl dipeptide; Cell biology; Peptidoglycan; Inflammasome; Signal transduction; Biology; Receptor; Pattern recognition receptor; TLR4; Ubiquitin; Scaffold protein; Chemistry; Innate immune system; Biochemistry","score_opus":0.024891362326610437,"score_gpt":0.21027899124326335,"score_spread":0.18538762891665292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965318611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99549687,0.0013872953,0.0016519914,0.0001055374,0.000042080726,0.000018824547,0.00007878986,0.00008966783,0.0011287951],"genre_scores_gemma":[0.9970228,0.00044505132,0.00092792226,0.00004492339,0.000014804092,0.00002282152,0.00012821842,0.000010288937,0.0013831375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987876,0.000024308732,0.000010862438,0.000023194048,0.000027390324,0.000035407094],"domain_scores_gemma":[0.99993336,0.0000070895426,0.000014411875,0.0000064151013,0.000008459806,0.000030232839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014990056,0.00033338112,0.00031110455,0.00017486534,0.00015706141,0.00020405425,0.00012801099,0.00025062342,0.0012809315],"category_scores_gemma":[0.00009957076,0.00008479487,0.00018787157,0.00012418356,0.0002541198,0.00029273052,0.0002374593,0.0005294926,0.00023122432],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031843793,0.00009121198,0.00008235131,0.000059547914,0.0000046180558,0.000049940307,0.000013321803,0.000052680916,0.9979442,0.000072156676,0.00006778273,0.0012436972],"study_design_scores_gemma":[0.000055555924,0.0008694442,0.0021105213,0.000006410778,0.000011549805,0.00019394899,0.000029476561,0.00119054,0.9939693,0.000074655574,0.0014837346,0.000004894312],"about_ca_topic_score_codex":0.00021828244,"about_ca_topic_score_gemma":0.0003393919,"teacher_disagreement_score":0.0012809315,"about_ca_system_score_codex":0.00014109483,"about_ca_system_score_gemma":0.0001467872,"threshold_uncertainty_score":0.0042851567},"labels":[],"label_agreement":null},{"id":"W1965394044","doi":"10.1096/fj.04-2048fje","title":"CpG motifs in bacterial DNA delay apoptosis of neutrophil granulocytes","year":2004,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Neutrophil extracellular traps; Apoptosis; DNA; CpG site; Immunology; Molecular biology; Biology; Genetics; Gene; Inflammation; DNA methylation; Gene expression","score_opus":0.009001073808547316,"score_gpt":0.2125526416944228,"score_spread":0.2035515678858755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965394044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948426,0.0026752339,0.0015068433,0.000063173284,0.000026734482,0.000020235673,0.0000734769,0.00006988645,0.0007220552],"genre_scores_gemma":[0.9964855,0.00092333567,0.0013792021,0.00005233201,0.000009257061,0.00001653438,0.00015876268,0.0000087439885,0.00096633204],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999045,0.00002940114,0.000010462604,0.000009614623,0.00002058101,0.000025370713],"domain_scores_gemma":[0.9998996,0.00002910062,0.000027326294,0.000010750823,0.000009521178,0.00002371235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013180422,0.00025899571,0.00016255635,0.0001189682,0.00004988731,0.00014009874,0.000094718336,0.00019313415,0.00092704216],"category_scores_gemma":[0.00026612243,0.0001021512,0.00009439877,0.00007092168,0.00015494911,0.00014263164,0.00014605855,0.00034309877,0.000271937],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089243014,0.00007331432,0.00018058016,0.00006429402,0.0000058514047,0.000045233774,0.000012807363,0.00010221673,0.9938406,0.00011377323,0.000033102886,0.0046358076],"study_design_scores_gemma":[0.00008287482,0.0018425077,0.0022386566,0.000009128597,0.00001290995,0.00022321427,0.000011319994,0.0007083804,0.9937169,0.000093092254,0.0010583821,0.0000026675964],"about_ca_topic_score_codex":0.00017776835,"about_ca_topic_score_gemma":0.00036045996,"teacher_disagreement_score":0.00092704216,"about_ca_system_score_codex":0.00016165583,"about_ca_system_score_gemma":0.00016910267,"threshold_uncertainty_score":0.0031012297},"labels":[],"label_agreement":null},{"id":"W1965611801","doi":"10.1016/j.vaccine.2010.02.081","title":"The potential of 3′,5′-cyclic diguanylic acid (c-di-GMP) as an effective vaccine adjuvant","year":2010,"lang":"en","type":"review","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; National Research Council Canada; Institute for Biological Sciences","funders":"National Research Council Canada","keywords":"Adjuvant; Biofilm; Intracellular; Virulence; Vaccine adjuvant; In vivo; Microbiology; In vitro; Cell; Biology; Chemistry; Bacteria; Immunology; Cell biology; Biochemistry; Biotechnology","score_opus":0.007752884704892773,"score_gpt":0.27851419133771393,"score_spread":0.27076130663282116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965611801","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006776824,0.99635017,0.00059165497,0.0002488179,0.0004676209,0.000010710657,0.000023696868,0.000011572668,0.0016180556],"genre_scores_gemma":[0.0032453144,0.9936394,0.0007095438,0.00023507251,0.0002833564,0.0000149115895,0.00006656812,0.0000028634563,0.0018028741],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99992204,0.000009678758,0.000008946208,0.000015900532,0.000030113999,0.000013249812],"domain_scores_gemma":[0.99989414,0.000035010584,0.000022090628,0.0000038642374,0.000029014249,0.000015964239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004418936,0.0010093523,0.001000554,0.00085632724,0.00017218284,0.00063979544,0.00075535517,0.001026702,0.001893042],"category_scores_gemma":[0.00027115102,0.00024545932,0.00025106204,0.0009390062,0.00037898513,0.001018092,0.00045654498,0.0013830957,0.0016258963],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023010468,0.00016689366,0.00011652099,0.008870768,0.000043947166,0.0002934905,0.000027500595,0.00087299035,0.039075945,0.004593861,0.018266117,0.9274419],"study_design_scores_gemma":[0.0000693456,0.00031888878,0.0005529299,0.00078598724,0.00009798669,0.0010189699,0.000031958734,0.00040486042,0.011090118,0.0017693943,0.9838373,0.00002220358],"about_ca_topic_score_codex":0.0008253059,"about_ca_topic_score_gemma":0.0011712624,"teacher_disagreement_score":0.001893042,"about_ca_system_score_codex":0.0006441324,"about_ca_system_score_gemma":0.00075294153,"threshold_uncertainty_score":0.0063328743},"labels":[],"label_agreement":null},{"id":"W1967005844","doi":"10.1038/nm.1965","title":"Toll-like receptor 2 ligands on the staphylococcal cell wall downregulate superantigen-induced T cell activation and prevent toxic shock syndrome","year":2009,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":134,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University; University of Calgary; Robarts Clinical Trials","funders":"","keywords":"Superantigen; Toxic shock syndrome; Peptidoglycan; Enterotoxin; Microbiology; Biology; Lipoteichoic acid; Immune system; Toll-like receptor; Staphylococcus aureus; Immunology; T cell; Innate immune system; Cell wall; Bacteria; Escherichia coli; Biochemistry","score_opus":0.0060051741374717,"score_gpt":0.22109684433033822,"score_spread":0.2150916701928665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967005844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965551,0.0007358454,0.0008440891,0.00010862719,0.00005739507,0.000019737592,0.000050266626,0.00005939985,0.0015695363],"genre_scores_gemma":[0.99578756,0.0004457688,0.0008015961,0.00010814572,0.000039352522,0.000019964182,0.00015869718,0.000017775077,0.0026210845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985945,0.000032916312,0.000009876051,0.000010156419,0.000030312074,0.00005734392],"domain_scores_gemma":[0.9998863,0.00002188809,0.000025133668,0.000016746528,0.000012311288,0.00003768954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012231086,0.00041989278,0.00036414544,0.0002003918,0.00013613625,0.00034999638,0.00014661263,0.00023628265,0.0020336378],"category_scores_gemma":[0.0002417172,0.00014274212,0.00017571023,0.00007939951,0.00020281246,0.00016754758,0.00016980406,0.0008155591,0.0005980765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007805377,0.00022923181,0.00022083978,0.000022952287,0.0000069207485,0.000067923065,0.000014285021,0.00014324933,0.994331,0.0001065279,0.00014085855,0.003935699],"study_design_scores_gemma":[0.00032482055,0.0029615115,0.007112849,0.000012294952,0.000030305882,0.00031506148,0.000060275157,0.001407656,0.98522574,0.00017610154,0.002363511,0.00000977998],"about_ca_topic_score_codex":0.00023994708,"about_ca_topic_score_gemma":0.00040385927,"teacher_disagreement_score":0.0020336378,"about_ca_system_score_codex":0.00015295301,"about_ca_system_score_gemma":0.0002134239,"threshold_uncertainty_score":0.0068032146},"labels":[],"label_agreement":null},{"id":"W1967240755","doi":"10.1139/y00-124","title":"Epinephrine causes a reduction in lymph node cell output in sheep","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Epinephrine; Reduction (mathematics); Medicine; Internal medicine; Biology; Mathematics","score_opus":0.0115051451051507,"score_gpt":0.24373532624025382,"score_spread":0.23223018113510313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967240755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998212,0.0006331574,0.00052677566,0.000041735497,0.000019977622,0.00001733514,0.00010951602,0.00002200907,0.00041755044],"genre_scores_gemma":[0.9964275,0.00069301843,0.0008836279,0.00007126654,0.000029723364,0.000040043877,0.00019548301,0.000016559376,0.0016427565],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997757,0.000043832933,0.000022670914,0.00006088979,0.000052984167,0.00004391553],"domain_scores_gemma":[0.99958163,0.00015080781,0.00011635736,0.0000500025,0.000031572836,0.000069635375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014569229,0.0003150453,0.0003936662,0.00024612114,0.00008089764,0.00033257194,0.0001583358,0.0003719185,0.0007390998],"category_scores_gemma":[0.00040796824,0.0001843019,0.00019640873,0.000098534605,0.00027962276,0.00023480383,0.00016754615,0.00072346005,0.0002909947],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011877111,0.000107287095,0.0011257958,0.00006909294,0.000009673286,0.00026164632,0.000072548544,0.00006551115,0.9939579,0.00002820683,0.00003729631,0.0030772688],"study_design_scores_gemma":[0.00011453185,0.009930646,0.02770104,0.00003100674,0.000078023084,0.0007531335,0.0001249262,0.0008742118,0.9587053,0.00009495296,0.0015732512,0.000019034762],"about_ca_topic_score_codex":0.00024621407,"about_ca_topic_score_gemma":0.00040318223,"teacher_disagreement_score":0.0007390998,"about_ca_system_score_codex":0.00018117385,"about_ca_system_score_gemma":0.00009608115,"threshold_uncertainty_score":0.0024725199},"labels":[],"label_agreement":null},{"id":"W1967463201","doi":"10.1080/10425170701295856","title":"Molecular cloning and expression analysis of chicken <i>MyD88</i> and <i>TRIF</i> genes","year":2007,"lang":"en","type":"article","venue":"DNA sequence","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Luonnontieteiden ja Tekniikan Tutkimuksen Toimikunta; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"TRIF; Gene; Biology; Open reading frame; Complementary DNA; Cloning (programming); Sequence analysis; Innate immune system; Genetics; Coding region; Peptide sequence; Toll-like receptor; Molecular biology; Receptor","score_opus":0.010015885852093013,"score_gpt":0.24956128970382493,"score_spread":0.23954540385173193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967463201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977215,0.0020370693,0.011387971,0.00027908434,0.00006212432,0.00020926248,0.0051807584,0.000086433385,0.003542363],"genre_scores_gemma":[0.8988938,0.0027515732,0.050744936,0.0002720265,0.000048324,0.00022708904,0.035228983,0.00014701327,0.01168631],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987185,0.000011571661,0.000013783899,0.000042669853,0.00002890581,0.000031084543],"domain_scores_gemma":[0.9998311,0.00003214829,0.00003822298,0.000019171266,0.000037934315,0.00004141835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011477741,0.0003151799,0.00021115226,0.00031957842,0.00023380588,0.0002295032,0.00027744973,0.00027530012,0.0010255573],"category_scores_gemma":[0.00015318333,0.00026085586,0.00036218224,0.00020629105,0.00016338538,0.00018343565,0.00019819044,0.0004728853,0.0010209073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055219734,0.000013727161,0.00017027683,0.000041883344,0.000002541942,0.000055629425,0.000023136403,0.00003940404,0.99843293,0.00011642921,0.000043691274,0.0010051265],"study_design_scores_gemma":[0.000057762092,0.0006786623,0.035873976,0.00006900419,0.000062671585,0.0013957189,0.00017266397,0.0021695055,0.9321794,0.00016406643,0.027151272,0.000025202886],"about_ca_topic_score_codex":0.0018094426,"about_ca_topic_score_gemma":0.0021556283,"teacher_disagreement_score":0.0018094426,"about_ca_system_score_codex":0.00040619713,"about_ca_system_score_gemma":0.0002508039,"threshold_uncertainty_score":0.003597796},"labels":[],"label_agreement":null},{"id":"W1967488340","doi":"10.1016/j.bbrc.2006.11.132","title":"A phosphorylation site in the Toll-like receptor 5 TIR domain is required for inflammatory signalling in response to flagellin","year":2006,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia; Vancouver Coastal Health Research Institute","funders":"Canadian Institutes of Health Research; Health Canada; Vancouver Coastal Health Research Institute","keywords":"TLR5; Flagellin; Phosphorylation; Cell biology; Toll-like receptor; HEK 293 cells; Phosphatidylinositol; Biology; Tyrosine phosphorylation; Chemistry; Receptor; Signal transduction; Biochemistry; TLR4; TLR2; Innate immune system","score_opus":0.036692990790547386,"score_gpt":0.32358748110656993,"score_spread":0.28689449031602254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967488340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928926,0.00075499987,0.0041023074,0.0002560343,0.00010199728,0.000041941035,0.00045171453,0.000109869536,0.0012885755],"genre_scores_gemma":[0.9954139,0.00023678293,0.002295723,0.00012767159,0.000019667217,0.000023091226,0.0007876267,0.000035395926,0.0010601218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982375,0.000032833435,0.000019329744,0.00003300195,0.000037506903,0.000053534513],"domain_scores_gemma":[0.9996117,0.000059441852,0.00012721567,0.000039313552,0.00002898241,0.00013341625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024681364,0.00043340115,0.0002828222,0.00019987888,0.00044323053,0.00039683538,0.00048947625,0.0006506122,0.0026641719],"category_scores_gemma":[0.00035739935,0.00037183412,0.00051719206,0.00011162414,0.0004268446,0.0003634875,0.00040791227,0.00079449825,0.0015304659],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000764889,0.000048350958,0.00030426867,0.000054224663,0.000008665798,0.0003175008,0.000019871013,0.00013603338,0.9968708,0.00037530766,0.00013094647,0.00096914585],"study_design_scores_gemma":[0.00021400925,0.0003442183,0.032431796,0.000045884924,0.000050620245,0.0023191315,0.00008799941,0.0035890273,0.95632225,0.00070374395,0.0038397803,0.00005157913],"about_ca_topic_score_codex":0.00077043416,"about_ca_topic_score_gemma":0.001137404,"teacher_disagreement_score":0.0026641719,"about_ca_system_score_codex":0.00052567327,"about_ca_system_score_gemma":0.00041781116,"threshold_uncertainty_score":0.008912563},"labels":[],"label_agreement":null},{"id":"W1968336033","doi":"10.1038/nature736","title":"Severe impairment of interleukin-1 and Toll-like receptor signalling in mice lacking IRAK-4","year":2002,"lang":"en","type":"article","venue":"Nature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":849,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute","keywords":"Biology; Innate immune system; Receptor; Signal transduction; Gene; Toll-like receptor; Kinase; Cell biology; Serine; Lipopolysaccharide; Homology (biology); Genetics; Immunology; Phosphorylation","score_opus":0.007184119859056167,"score_gpt":0.22021274889804035,"score_spread":0.21302862903898417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968336033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817963,0.002351564,0.0067137494,0.0008390639,0.00026166203,0.000114887196,0.003469318,0.0010643986,0.0033890256],"genre_scores_gemma":[0.98023903,0.0018121566,0.004434076,0.00035731975,0.00012090224,0.00019013845,0.0018531769,0.0004969542,0.010496118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906546,0.00010655664,0.00011578224,0.000268573,0.00022459813,0.00021906456],"domain_scores_gemma":[0.9980679,0.00019370017,0.000857636,0.00019180407,0.00008042615,0.00060852605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047879995,0.0035305608,0.00126482,0.0024348823,0.0005849651,0.0011813197,0.0010857198,0.0019310869,0.0059865634],"category_scores_gemma":[0.0006072445,0.0012779429,0.0010832781,0.00065991457,0.0022574563,0.0011192615,0.0009786409,0.0038724062,0.0015565938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009941359,0.0001394804,0.00024719286,0.00008401895,0.000027804712,0.00064044434,0.0000328505,0.0002635747,0.9956873,0.00059887226,0.00018712984,0.0010971047],"study_design_scores_gemma":[0.0010020176,0.0017004207,0.023712827,0.00011284487,0.00035627867,0.0093900645,0.0003144745,0.0032599743,0.95180565,0.0024087983,0.005820016,0.000116621195],"about_ca_topic_score_codex":0.00092420285,"about_ca_topic_score_gemma":0.0012247092,"teacher_disagreement_score":0.0059865634,"about_ca_system_score_codex":0.00075097027,"about_ca_system_score_gemma":0.0008295165,"threshold_uncertainty_score":0.020027101},"labels":[],"label_agreement":null},{"id":"W1968337792","doi":"10.1042/bj20031808","title":"Recruitment of the cross-linked opsonic receptor CD32A (FcγRIIA) to high-density detergent-resistant membrane domains in human neutrophils","year":2004,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Opsonin; Receptor; Fc receptor; Chemistry; Biophysics; Microbiology; Biology; Cell biology; Phagocytosis; Biochemistry","score_opus":0.021735571273902753,"score_gpt":0.2835815878051446,"score_spread":0.26184601653124184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1968337792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963147,0.002020456,0.0010040741,0.000063465755,0.000007918227,0.00002542256,0.00010559953,0.000012565387,0.00044568887],"genre_scores_gemma":[0.99652326,0.0010878472,0.0010937115,0.000043848373,0.000007801747,0.000033740514,0.0002361391,0.000003510984,0.00097012776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998759,0.000032212036,0.000010338464,0.000028937206,0.000025318841,0.00002734723],"domain_scores_gemma":[0.9999685,0.0000066870184,0.000007145541,0.0000043990635,0.0000050822887,0.000008140317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013840498,0.00019545504,0.00021501254,0.00012545122,0.00011396742,0.0002559232,0.00010271647,0.00029785195,0.00077826355],"category_scores_gemma":[0.00015700077,0.00014560854,0.00017652249,0.000110766756,0.00011620466,0.00014075861,0.00019524829,0.00022463173,0.0003872335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015788972,0.0000162609,0.00048818448,0.00003511745,0.0000043711098,0.000105594314,0.000029910627,0.000043516717,0.9978002,0.00005297942,0.000030201649,0.0012358066],"study_design_scores_gemma":[0.00009847175,0.0007752926,0.045549206,0.000021092312,0.000037385144,0.001808888,0.00015938515,0.002613874,0.9439803,0.00015223933,0.0047926763,0.000011191534],"about_ca_topic_score_codex":0.0006989204,"about_ca_topic_score_gemma":0.0004942045,"teacher_disagreement_score":0.00077826355,"about_ca_system_score_codex":0.0002756702,"about_ca_system_score_gemma":0.00014396304,"threshold_uncertainty_score":0.002603531},"labels":[],"label_agreement":null},{"id":"W1969269700","doi":"10.1016/j.rvsc.2009.10.003","title":"All three classes of CpG ODNs up-regulate IP-10 gene in pigs","year":2009,"lang":"en","type":"article","venue":"Research in Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; University of Alberta; University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"CpG site; Gene; Biology; Genetics; Molecular biology; Cell biology; Gene expression; DNA methylation","score_opus":0.13677594045692001,"score_gpt":0.4066304679939999,"score_spread":0.26985452753707984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969269700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99665123,0.00053060596,0.0009177592,0.000131974,0.00007928047,0.000027119688,0.000350783,0.000023352226,0.0012879455],"genre_scores_gemma":[0.9918189,0.0004205723,0.0011217821,0.00033522505,0.000050829127,0.00011493695,0.0006903792,0.00002505989,0.0054223402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996649,0.00003918426,0.000017927443,0.0000659725,0.000041676398,0.00017030447],"domain_scores_gemma":[0.9996,0.00012512897,0.00006454609,0.0000270757,0.00003699698,0.00014624566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021374424,0.00047517396,0.00042294024,0.0005932607,0.00020829399,0.0004148912,0.00019163912,0.0007305688,0.0021427975],"category_scores_gemma":[0.00026943625,0.000353477,0.00058531814,0.00020254847,0.00066386536,0.00028224927,0.00027435998,0.0012557458,0.00040547675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012116403,0.00009364442,0.0012026975,0.000044159722,0.000010252222,0.00009175614,0.00002982621,0.00004292321,0.9960322,0.000033280397,0.000049106733,0.0011586188],"study_design_scores_gemma":[0.000221029,0.007257675,0.10162536,0.000044843226,0.00012735417,0.00046782155,0.00045627658,0.001147413,0.88556546,0.00021364819,0.0028448745,0.000028332779],"about_ca_topic_score_codex":0.0014110268,"about_ca_topic_score_gemma":0.0016500242,"teacher_disagreement_score":0.0021427975,"about_ca_system_score_codex":0.0004244073,"about_ca_system_score_gemma":0.00032728055,"threshold_uncertainty_score":0.0071683526},"labels":[],"label_agreement":null},{"id":"W1969466722","doi":"10.1371/journal.pone.0006519","title":"cIAP-1 Controls Innate Immunity to C. pneumoniae Pulmonary Infection","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"European Commission","keywords":"Innate immune system; Immunity; Immunology; Medicine; Microbiology; Biology; Immune system","score_opus":0.02163265674477329,"score_gpt":0.22636793273526132,"score_spread":0.20473527599048802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969466722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99271023,0.0044116843,0.0015400224,0.00013974044,0.00003980867,0.000021720933,0.00014568226,0.00007148517,0.00091967883],"genre_scores_gemma":[0.99658513,0.0011857938,0.0009376985,0.000038847993,0.000018415023,0.000028269766,0.00011993352,0.000014223013,0.0010716628],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996112,0.00006913598,0.000027382524,0.00008166371,0.000067191846,0.00014339606],"domain_scores_gemma":[0.99944633,0.000069414455,0.00020835134,0.00005154795,0.000065617955,0.00015863568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026527556,0.0005643737,0.00042638503,0.0004909608,0.0002700988,0.0007237652,0.0004314865,0.0005114453,0.00084255444],"category_scores_gemma":[0.00049702084,0.00028644415,0.00019257881,0.0001875825,0.0006261891,0.00051029806,0.000458783,0.0010195615,0.00041772512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000254746,0.000023896951,0.000572405,0.000050818322,0.0000035308733,0.00016025068,0.00002309035,0.00006029021,0.99739444,0.000119299395,0.000031799507,0.001305343],"study_design_scores_gemma":[0.000051041217,0.0006847023,0.0416091,0.00003839244,0.000049664373,0.0018026716,0.00022890604,0.0025116135,0.9496425,0.0005500337,0.0028029615,0.00002843067],"about_ca_topic_score_codex":0.00029705363,"about_ca_topic_score_gemma":0.00024097094,"teacher_disagreement_score":0.00084255444,"about_ca_system_score_codex":0.0005179802,"about_ca_system_score_gemma":0.00032681008,"threshold_uncertainty_score":0.003758192},"labels":[],"label_agreement":null},{"id":"W1969532200","doi":"10.1515/pac-2013-1020","title":"Structural aspects of molecular recognition in the immune system. Part I: Acquired immunity (IUPAC Technical Report)","year":2014,"lang":"en","type":"article","venue":"Pure and Applied Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"University of California, San Francisco","keywords":"Chemistry; Molecular recognition; Antigen; Epitope; Antibody; Major histocompatibility complex; Dimer; T-cell receptor; Immune system; Molecule; Computational biology; Stereochemistry; Immunology; T cell; Biochemistry; Gene; Biology","score_opus":0.006671201520258074,"score_gpt":0.21402479484520254,"score_spread":0.20735359332494446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969532200","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0052323295,0.93665195,0.01330425,0.0012262774,0.0049660094,0.00012055451,0.00078276533,0.00018948947,0.03752631],"genre_scores_gemma":[0.06869849,0.8499546,0.012937529,0.00089745905,0.00804258,0.0006215373,0.0033364908,0.00010721339,0.05540407],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99956924,0.000084678584,0.000034012774,0.00009469164,0.00013966572,0.00007780954],"domain_scores_gemma":[0.99979097,0.00004273881,0.000031782085,0.000025505811,0.000082031635,0.000026967526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067012117,0.0014739226,0.0010068129,0.0022353663,0.0005015052,0.0011201346,0.00177353,0.001109981,0.010386227],"category_scores_gemma":[0.00041001732,0.000690399,0.00049925275,0.0033099663,0.0012936969,0.0013960253,0.0015166808,0.0018824637,0.009946683],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003929954,0.00037806475,0.00077291764,0.012864975,0.00011558707,0.0014982584,0.00035350554,0.010631703,0.07098261,0.14916123,0.14895207,0.60389614],"study_design_scores_gemma":[0.000036068446,0.00049466325,0.0020601947,0.00093657855,0.000048940517,0.0016814821,0.00007642597,0.0022100736,0.015095134,0.030564355,0.94673854,0.00005762699],"about_ca_topic_score_codex":0.0013715324,"about_ca_topic_score_gemma":0.00041585971,"teacher_disagreement_score":0.010386227,"about_ca_system_score_codex":0.0011568724,"about_ca_system_score_gemma":0.0007472753,"threshold_uncertainty_score":0.034745395},"labels":[],"label_agreement":null},{"id":"W1969626462","doi":"10.1016/j.cyto.2012.10.013","title":"Interleukin-10 activates Toll-like receptor 4 and requires MyD88 for cardiomyocyte survival","year":2012,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital; University of Manitoba","funders":"Canadian Institutes of Health Research; Hospital Research Foundation; Manitoba Health Research Council","keywords":"Toll; Toll-like receptor; Interleukin-1 receptor; Receptor; Cell biology; Chemistry; Biology; Medicine; Internal medicine; Interleukin; Immunology; Cytokine; Innate immune system","score_opus":0.019477076639411547,"score_gpt":0.2574882585979723,"score_spread":0.23801118195856075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969626462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98701394,0.0032402033,0.004589572,0.00061218423,0.00023367036,0.000038371596,0.0004151597,0.0000992229,0.0037576065],"genre_scores_gemma":[0.99096256,0.0013141301,0.0023624091,0.0002063762,0.00008318345,0.00006448266,0.00069907104,0.000022514227,0.0042851935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995111,0.000096552365,0.000039157538,0.00005332362,0.00008171225,0.0002180332],"domain_scores_gemma":[0.99974686,0.000028465238,0.00007403755,0.000028966655,0.000036259633,0.00008552086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040436737,0.00056719675,0.00027199637,0.00028577828,0.00020456093,0.00038935975,0.00021302115,0.00045709888,0.0024106598],"category_scores_gemma":[0.0002555984,0.0003110663,0.0004795072,0.000093543014,0.0002606644,0.0004190966,0.0006356812,0.0010600343,0.0012673379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049514306,0.000037678503,0.0010674206,0.00006813976,0.000011999609,0.00021990204,0.000023928087,0.000049887683,0.9957496,0.00020171993,0.00024728753,0.0018273714],"study_design_scores_gemma":[0.00026191663,0.0011609696,0.11642241,0.00008267511,0.00007865424,0.0025605562,0.00046260274,0.001772613,0.8663825,0.0005221637,0.01026776,0.000025207752],"about_ca_topic_score_codex":0.00025988993,"about_ca_topic_score_gemma":0.00068241736,"teacher_disagreement_score":0.0024106598,"about_ca_system_score_codex":0.00043062112,"about_ca_system_score_gemma":0.00032183886,"threshold_uncertainty_score":0.008064449},"labels":[],"label_agreement":null},{"id":"W1969725199","doi":"10.1111/j.1365-2249.2006.03210.x","title":"The myeloid differentiation factor 88 is dispensable for the development of a delayed host response to <i>Pseudomonas aeruginosa</i> lung infection in mice","year":2006,"lang":"en","type":"article","venue":"Clinical & Experimental Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Pseudomonas aeruginosa; Biology; Microbiology; Immunology; Lung; Immune system; Tumor necrosis factor alpha; Bacteria; Medicine","score_opus":0.021164028026056513,"score_gpt":0.3253802652882619,"score_spread":0.3042162372622054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969725199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991356,0.0027649214,0.0022392361,0.0003550261,0.00003657356,0.000046657242,0.0007805712,0.00033648076,0.002084505],"genre_scores_gemma":[0.9919748,0.0012500057,0.0021267026,0.00016562965,0.000035257122,0.000070270995,0.0007888546,0.00014896615,0.003439559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948174,0.00012840868,0.000051581694,0.000096530006,0.00011109359,0.00013069755],"domain_scores_gemma":[0.9986903,0.00014752,0.00060719455,0.00014447367,0.000064951244,0.00034550083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037948982,0.00082336017,0.0005363464,0.0007015641,0.00024619457,0.0007793026,0.00048451617,0.00068163674,0.0020720528],"category_scores_gemma":[0.0004088879,0.0006711809,0.00035794114,0.00019850457,0.0009012917,0.00048339294,0.00040547154,0.0014393905,0.0009890656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011694166,0.0001329179,0.00067397824,0.00006786893,0.0000131028355,0.00029678355,0.000023391322,0.0000903127,0.9948697,0.0004112364,0.0001588177,0.0020926213],"study_design_scores_gemma":[0.0009373709,0.004047247,0.042197466,0.00013222761,0.00014222623,0.0065033245,0.00014497357,0.0035543318,0.9307805,0.00078920013,0.010723765,0.000047348305],"about_ca_topic_score_codex":0.0005300266,"about_ca_topic_score_gemma":0.00058654783,"teacher_disagreement_score":0.0020720528,"about_ca_system_score_codex":0.00052150403,"about_ca_system_score_gemma":0.00039949463,"threshold_uncertainty_score":0.006931722},"labels":[],"label_agreement":null},{"id":"W1969954884","doi":"10.1016/j.molimm.2009.12.011","title":"Role of Hsp90 in CpG ODN mediated immunostimulation in avian macrophages","year":2010,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; University of Saskatchewan","keywords":"Protein kinase B; MAPK/ERK pathway; TLR9; PI3K/AKT/mTOR pathway; Cell biology; Phosphorylation; Chemokine; Signal transduction; Biology; Hsp90; Toll-Like Receptor 9; Kinase; Nitric oxide; CpG Oligodeoxynucleotide; Chemistry; Molecular biology; Immune system; Immunology; Biochemistry; Heat shock protein; Gene expression; Endocrinology; Gene","score_opus":0.002487200969121737,"score_gpt":0.20848161149587768,"score_spread":0.20599441052675593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969954884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99419916,0.0023192586,0.0013441035,0.00013426262,0.000023803726,0.000015898946,0.00022390221,0.000038050108,0.00170154],"genre_scores_gemma":[0.9977223,0.0005065145,0.0004623489,0.000035761965,0.0000060181073,0.000006187968,0.00014292829,0.0000051002344,0.0011127519],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992347,0.00001187868,0.000004362086,0.000010990909,0.000013385385,0.000035855872],"domain_scores_gemma":[0.99994826,0.0000041465823,0.000014462206,0.0000063199745,0.000008823681,0.000018049404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009598674,0.00018209415,0.00013303,0.00011771417,0.00013385416,0.0002465053,0.000103941005,0.00022516609,0.0006856678],"category_scores_gemma":[0.000053709948,0.00009040307,0.00018179005,0.000051894436,0.00014784749,0.00020239886,0.00016839131,0.00033723883,0.00027601366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097772085,0.000010931742,0.00026350826,0.000023179406,0.0000045882075,0.00004924191,0.000009981,0.000035995246,0.9982551,0.00008276439,0.00003340057,0.0011334289],"study_design_scores_gemma":[0.000023841943,0.0004526687,0.05543605,0.000017085413,0.000027455522,0.0004098622,0.00018696676,0.0011641348,0.93958676,0.00014151295,0.0025458382,0.000007806673],"about_ca_topic_score_codex":0.00075836247,"about_ca_topic_score_gemma":0.0012200914,"teacher_disagreement_score":0.00075836247,"about_ca_system_score_codex":0.00019999477,"about_ca_system_score_gemma":0.00013103917,"threshold_uncertainty_score":0.0022937655},"labels":[],"label_agreement":null},{"id":"W1969981758","doi":"10.1053/j.gastro.2012.09.008","title":"Sterile Inflammation in the Liver","year":2012,"lang":"en","type":"review","venue":"Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":656,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"Inflammation; Medicine; Internal medicine","score_opus":0.04333893147274765,"score_gpt":0.28098315884884534,"score_spread":0.2376442273760977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1969981758","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000510912,0.99881506,0.00008546356,0.00022327046,0.00040396088,0.0000018543923,0.000006258389,0.0000043215696,0.00040879508],"genre_scores_gemma":[0.00048650478,0.9976051,0.00010236592,0.00023201558,0.0010357545,0.000003121143,0.000016928474,9.5186215e-7,0.0005173019],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998023,0.00003651922,0.000030472414,0.00003593111,0.00006881639,0.000026051317],"domain_scores_gemma":[0.99960357,0.00015040295,0.000081622995,0.000014416976,0.00007926268,0.0000707543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006380134,0.0012137024,0.0018919099,0.0024839703,0.00035702033,0.001430812,0.00087619835,0.0014742573,0.0033745882],"category_scores_gemma":[0.00072915165,0.00037842427,0.00038844807,0.0022330584,0.00088508864,0.0018407282,0.0011853059,0.0022890859,0.0022023376],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014912516,0.00006119571,0.00018508219,0.012763693,0.000052804386,0.00035838198,0.000039906234,0.00031027492,0.0015953028,0.0025573282,0.051684964,0.9302419],"study_design_scores_gemma":[0.000036441397,0.00010566775,0.0009466469,0.004025633,0.0000950033,0.0026664059,0.000068590336,0.000117889314,0.00039372046,0.0025096533,0.9890056,0.000028794026],"about_ca_topic_score_codex":0.0007976084,"about_ca_topic_score_gemma":0.0016485136,"teacher_disagreement_score":0.0033745882,"about_ca_system_score_codex":0.00059602334,"about_ca_system_score_gemma":0.0013214207,"threshold_uncertainty_score":0.01128906},"labels":[],"label_agreement":null},{"id":"W1970488634","doi":"10.1016/j.vetimm.2011.04.011","title":"Novel Bregs down-regulate TLR9-induced cytokine responses in sheep Peyer's patches","year":2011,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"TLR9; Biology; Immunology; Cytokine; Regulatory B cells; Lamina propria; CpG Oligodeoxynucleotide; Interleukin 10; Population; Homeostasis; Cell biology; Peyer's patch; Stimulation; Immune system; Epithelium; Endocrinology; Gene expression; Medicine; Genetics","score_opus":0.03930824802982066,"score_gpt":0.2505156728475981,"score_spread":0.21120742481777746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970488634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99527127,0.0015784824,0.0019431495,0.00017664168,0.000058333244,0.000049844795,0.00012359834,0.000064818145,0.00073382736],"genre_scores_gemma":[0.9920359,0.0009197376,0.0024741504,0.00018159357,0.000038475217,0.00005556596,0.0004237989,0.000028584145,0.0038423166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982387,0.000027830878,0.00001652229,0.00003164748,0.00004239952,0.000057657242],"domain_scores_gemma":[0.9998896,0.000021060043,0.000034465273,0.00001329145,0.000014388941,0.0000271038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022103314,0.00034638107,0.00045583918,0.00021173226,0.00017943504,0.0003810174,0.00021888246,0.0004763215,0.0020505348],"category_scores_gemma":[0.00019965105,0.00017998819,0.0002965367,0.00008770826,0.00038804777,0.00031508735,0.00020818679,0.0010927718,0.00060846115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029916666,0.000036310168,0.000079283214,0.000029164967,0.000003990039,0.000030758874,0.0000073544015,0.00002236674,0.9987018,0.000025362344,0.000022637796,0.00074169546],"study_design_scores_gemma":[0.00014539421,0.0020205062,0.0060866596,0.000016505133,0.000060142364,0.000407061,0.000099761346,0.0006341063,0.98726606,0.00008583701,0.0031697305,0.000008296389],"about_ca_topic_score_codex":0.00021762367,"about_ca_topic_score_gemma":0.0005181674,"teacher_disagreement_score":0.0020505348,"about_ca_system_score_codex":0.00023359444,"about_ca_system_score_gemma":0.000114221235,"threshold_uncertainty_score":0.0068597794},"labels":[],"label_agreement":null},{"id":"W1970961181","doi":"10.1155/2010/652098","title":"The p110<mml:math xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"><mml:mi>α</mml:mi></mml:math>and p110<mml:math xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"><mml:mi>β</mml:mi></mml:math>Isoforms of Class I Phosphatidylinositol 3-Kinase Are Involved in Toll-Like Receptor 5 Signaling in Epithelial Cells","year":2010,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Child and Family Research Institute; Vancouver Coastal Health","funders":"Canadian Institutes of Health Research; Vancouver Coastal Health Research Institute; Canada Foundation for Innovation; Crohn's and Colitis Foundation of Canada; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation; Wellcome Trust","keywords":"Algorithm; Mathematics","score_opus":0.009236449459783778,"score_gpt":0.21758733873872585,"score_spread":0.20835088927894208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970961181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35433882,0.011625785,0.1372729,0.009768979,0.0026298568,0.0017147447,0.1290938,0.03139248,0.32216272],"genre_scores_gemma":[0.36363006,0.0066634472,0.06598868,0.0025866132,0.00017928235,0.0015892431,0.16375782,0.0064379442,0.38916695],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996933,0.00002731263,0.00004156727,0.000065907516,0.00011607829,0.00005584341],"domain_scores_gemma":[0.99983525,0.000027705855,0.000036932634,0.000037125905,0.000024968691,0.000038058257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035535326,0.0010187324,0.00036331822,0.00050036114,0.000496575,0.0011924062,0.0009522344,0.00096062006,0.07408555],"category_scores_gemma":[0.00041947473,0.0004997332,0.00049412233,0.0006501132,0.0004305569,0.00075352914,0.0006557373,0.0021474059,0.051124625],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010872822,0.0003914787,0.00071334274,0.0005694422,0.000037868747,0.0001933454,0.00011547009,0.00043630853,0.8734331,0.0056939637,0.049954053,0.06737432],"study_design_scores_gemma":[0.00019727237,0.0002578975,0.0031987187,0.00006604754,0.000040428764,0.00044109678,0.000041067146,0.0019854894,0.49450234,0.0008566237,0.4983867,0.000026337924],"about_ca_topic_score_codex":0.0013624337,"about_ca_topic_score_gemma":0.0020513926,"teacher_disagreement_score":0.07408555,"about_ca_system_score_codex":0.0011726271,"about_ca_system_score_gemma":0.0007948682,"threshold_uncertainty_score":0.24784082},"labels":[],"label_agreement":null},{"id":"W1971064535","doi":"10.1016/j.imbio.2008.07.027","title":"Depletion of natural CD4+CD25+ T regulatory cells with anti-CD25 antibody does not change the course of Pseudomonas aeruginosa-induced acute lung infection in mice","year":2008,"lang":"en","type":"article","venue":"Immunobiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"IL-2 receptor; FOXP3; Immunology; Immune system; Biology; Lung; Pseudomonas aeruginosa; Cytokine; Spleen; T cell; Medicine; Internal medicine; Bacteria","score_opus":0.010004117925337945,"score_gpt":0.24839182459608186,"score_spread":0.2383877066707439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971064535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953433,0.0011178161,0.001291613,0.00025266965,0.00016212395,0.00005162088,0.00037886648,0.00022079262,0.0011811985],"genre_scores_gemma":[0.9925914,0.0007466728,0.0013276037,0.00024284591,0.00008840378,0.00011201139,0.00048030628,0.00006531753,0.0043455586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99938476,0.00008022014,0.00004077842,0.00014019075,0.0001104803,0.00024360513],"domain_scores_gemma":[0.99932086,0.000090644215,0.00016804866,0.00009818087,0.00003637209,0.00028587514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031358717,0.0010735594,0.00079247414,0.0007296045,0.000341029,0.0005764104,0.0007088704,0.0010556601,0.0016711877],"category_scores_gemma":[0.00034746536,0.0005248179,0.0006286753,0.00018992991,0.0009480895,0.00081175915,0.00024079664,0.0033225196,0.0005682882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017482807,0.0005257838,0.00024877812,0.000055377237,0.000016137272,0.00012712403,0.000031854346,0.00018492168,0.9948626,0.0001638056,0.0001469773,0.0018882854],"study_design_scores_gemma":[0.00028258664,0.005006527,0.0066417083,0.000023293995,0.00007833696,0.00042919032,0.00008057221,0.0016826724,0.9841,0.00021308617,0.0014342519,0.000027806294],"about_ca_topic_score_codex":0.0008655215,"about_ca_topic_score_gemma":0.0019760986,"teacher_disagreement_score":0.0016711877,"about_ca_system_score_codex":0.00049681694,"about_ca_system_score_gemma":0.00047524393,"threshold_uncertainty_score":0.0055906773},"labels":[],"label_agreement":null},{"id":"W1971259949","doi":"10.1371/journal.ppat.1004556","title":"IL-28B is a Key Regulator of B- and T-Cell Vaccine Responses against Influenza","year":2014,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Alberta","funders":"Canadian Institutes of Health Research; Canadian Society of Transplantation; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Alberta Innovates; Canada Excellence Research Chairs, Government of Canada; Government of Canada; National Science Foundation","keywords":"Vaccination; Immunology; Biology; T cell; Influenza vaccine; Immune system; Virology","score_opus":0.01323730420358451,"score_gpt":0.22454789248620233,"score_spread":0.2113105882826178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971259949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9567623,0.030637104,0.0045161415,0.0005127559,0.00029022587,0.00012930628,0.0013106635,0.00022425974,0.0056170956],"genre_scores_gemma":[0.9874956,0.0053346595,0.0021621697,0.00025200663,0.000095776246,0.00009141431,0.0009903695,0.000032122694,0.003545916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998684,0.000028710318,0.000010961822,0.000033460226,0.000035859815,0.00002261128],"domain_scores_gemma":[0.9998964,0.000014761077,0.000033899472,0.0000057818056,0.00001818631,0.000030899453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015667027,0.00044222144,0.00029867716,0.0002164361,0.00016494602,0.0002357936,0.00012857777,0.00022336547,0.0018168938],"category_scores_gemma":[0.00017444351,0.000106979234,0.00017515905,0.00009233525,0.00016066557,0.00006806065,0.00018144873,0.00040739696,0.0006555685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000798441,0.00012966695,0.008710955,0.00026601693,0.000050871808,0.00039556262,0.00004496367,0.0004137565,0.96462196,0.00016561676,0.0011025287,0.023299724],"study_design_scores_gemma":[0.00051529286,0.0040906975,0.29929575,0.00026808857,0.00026067664,0.0063527734,0.00034613872,0.0065366947,0.59564507,0.0014793528,0.085162856,0.00004672449],"about_ca_topic_score_codex":0.00027785712,"about_ca_topic_score_gemma":0.00021426968,"teacher_disagreement_score":0.0018168938,"about_ca_system_score_codex":0.00015757263,"about_ca_system_score_gemma":0.00018398234,"threshold_uncertainty_score":0.006078124},"labels":[],"label_agreement":null},{"id":"W1971378778","doi":"10.1016/j.molimm.2009.06.002","title":"Chicken TLR21 acts as a functional homologue to mammalian TLR9 in the recognition of CpG oligodeoxynucleotides","year":2009,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":262,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"","keywords":"TLR9; HEK 293 cells; Biology; CpG Oligodeoxynucleotide; Molecular biology; Cell biology; Toll-Like Receptor 9; Endoplasmic reticulum; Transfection; Receptor; Gene; Gene expression; Biochemistry","score_opus":0.011487466866652443,"score_gpt":0.2288245973570862,"score_spread":0.21733713049043377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971378778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928982,0.0009918243,0.0024675338,0.00009945261,0.00008207287,0.000025004088,0.000121032375,0.00005170158,0.003263097],"genre_scores_gemma":[0.9915903,0.00040541595,0.0025320852,0.000062858824,0.000018594896,0.000023005425,0.00041010213,0.000013832185,0.0049439277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996191,0.00010667112,0.00003031496,0.00006678537,0.00007856702,0.00009864365],"domain_scores_gemma":[0.99966276,0.000066325876,0.00006239272,0.00005979833,0.000069685804,0.00007892822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000389493,0.0003957021,0.000294159,0.0003055659,0.0003845807,0.00046436238,0.00025975416,0.0008417664,0.0019726325],"category_scores_gemma":[0.00040618549,0.00029816874,0.00049621443,0.000097182936,0.0003667446,0.00028750955,0.0003514423,0.0005388804,0.0014821233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002113896,0.000014476432,0.0001897564,0.000019188585,0.0000030329177,0.00008100181,0.000011046918,0.000031571166,0.99867874,0.000086304295,0.000027905331,0.0006455297],"study_design_scores_gemma":[0.000016716818,0.00026947976,0.0058319815,0.000007142086,0.000013760863,0.0005671408,0.000034744287,0.000714871,0.9901939,0.00004185373,0.0023020662,0.0000063096163],"about_ca_topic_score_codex":0.00055314123,"about_ca_topic_score_gemma":0.0007212922,"teacher_disagreement_score":0.0019726325,"about_ca_system_score_codex":0.00047542382,"about_ca_system_score_gemma":0.00022424974,"threshold_uncertainty_score":0.0065991282},"labels":[],"label_agreement":null},{"id":"W1971386112","doi":"10.1067/msy.2002.126096","title":"Impaired activation of mitogen-activated protein kinases after hemorrhagic shock","year":2002,"lang":"en","type":"article","venue":"Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University Health Network","funders":"","keywords":"p38 mitogen-activated protein kinases; Medicine; MAPK/ERK pathway; Kinase; Protein kinase A; Mitogen-activated protein kinase; Extracellular; Cytokine; Resuscitation; Immunology; Endocrinology; Internal medicine; Cell biology; Pharmacology; Biology; Anesthesia","score_opus":0.018484828468365567,"score_gpt":0.2067707915760676,"score_spread":0.18828596310770201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971386112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99704427,0.0014905008,0.00066083577,0.00009345305,0.00005810689,0.000012081003,0.000082656596,0.000028655013,0.00052945793],"genre_scores_gemma":[0.99854714,0.000622949,0.00018637779,0.000042976466,0.00003519989,0.0000127368885,0.00013045795,0.0000051509405,0.00041690984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974173,0.000057328805,0.000026578271,0.000022113607,0.000052369094,0.00009996338],"domain_scores_gemma":[0.9995665,0.000067133435,0.00014106458,0.00006947247,0.000041814892,0.00011394283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004021811,0.00053462025,0.0007411805,0.00054982683,0.00023975338,0.00045542445,0.00023345416,0.00046516763,0.0015261619],"category_scores_gemma":[0.00074347045,0.00018787211,0.00035551877,0.00034404753,0.0006122339,0.0004519967,0.00031690064,0.00095950003,0.00027601683],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0150457,0.00043539618,0.0072739213,0.00025834655,0.000076053475,0.0024135045,0.0001273928,0.00038589453,0.9602883,0.0005357771,0.00027166406,0.012888165],"study_design_scores_gemma":[0.00033525578,0.006100404,0.29398784,0.0000460127,0.00019318993,0.007439369,0.00042973473,0.0024890192,0.6850267,0.0015154415,0.0023946231,0.00004241602],"about_ca_topic_score_codex":0.00016807739,"about_ca_topic_score_gemma":0.00011619191,"teacher_disagreement_score":0.0015261619,"about_ca_system_score_codex":0.00029753576,"about_ca_system_score_gemma":0.00028678408,"threshold_uncertainty_score":0.0051054955},"labels":[],"label_agreement":null},{"id":"W1971388012","doi":"10.1016/j.rvsc.2013.01.024","title":"Chicken erythrocytes respond to Toll-like receptor ligands by up-regulating cytokine transcripts","year":2013,"lang":"en","type":"article","venue":"Research in Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"TLR9; TLR7; TLR3; Toll-like receptor; Biology; Receptor; Cytokine; Cell biology; Toll-Like Receptor 9; Gene; Innate immune system; Immunology; Molecular biology; Gene expression; Genetics","score_opus":0.06129719088914934,"score_gpt":0.3524983049637362,"score_spread":0.2912011140745868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971388012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942517,0.0019479026,0.0014101728,0.00012608686,0.000079721845,0.000026935868,0.00024430227,0.00002472413,0.0018884186],"genre_scores_gemma":[0.99073315,0.0011040358,0.002564633,0.00016456196,0.000043030817,0.00004151907,0.0004706991,0.000018883058,0.0048595574],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998078,0.000036465546,0.000016541953,0.000041458403,0.000038787362,0.00005901104],"domain_scores_gemma":[0.9997391,0.00007401064,0.000069489244,0.000022446884,0.000050557246,0.0000444275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014090686,0.00033266676,0.0001787934,0.00030810238,0.00012723604,0.0004811161,0.00008837739,0.00029596812,0.0012993198],"category_scores_gemma":[0.00022520732,0.00018377055,0.00019369238,0.00011050618,0.00024342285,0.0001841972,0.0002253192,0.00063574873,0.00045124957],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001310774,0.000005493444,0.00036583512,0.000015924392,0.0000017245958,0.000037407786,0.00001894959,0.000008566774,0.99895203,0.000031480635,0.000019537247,0.00041197415],"study_design_scores_gemma":[0.00004060568,0.00035480878,0.031125344,0.000021579852,0.00003384994,0.0002868478,0.00028797565,0.0003455827,0.96517396,0.00008395625,0.0022363006,0.000009156798],"about_ca_topic_score_codex":0.0004687307,"about_ca_topic_score_gemma":0.0009093311,"teacher_disagreement_score":0.0012993198,"about_ca_system_score_codex":0.00029185327,"about_ca_system_score_gemma":0.0001287121,"threshold_uncertainty_score":0.0043466687},"labels":[],"label_agreement":null},{"id":"W1971534104","doi":"10.1159/000097168","title":"The Role of the Growth and Lactogenic Hormone Family in Immune Function (Part 1 of 2)","year":2006,"lang":"en","type":"review","venue":"NeuroImmunoModulation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Immune system; Biology; Receptor; Cell biology; Cell adhesion molecule; Antigen; Lymphocyte; Stromal cell; Immunology; Cancer research; Genetics","score_opus":0.01415509060792579,"score_gpt":0.22758022844971132,"score_spread":0.21342513784178552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971534104","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011606758,0.9899198,0.0005718347,0.0006479993,0.0018234707,0.000016178034,0.00006739466,0.000024702314,0.00576798],"genre_scores_gemma":[0.008697032,0.97771806,0.0007106872,0.0009626997,0.0028110486,0.000035305857,0.00019127129,0.000011450968,0.008862431],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998888,0.000018832807,0.000010866203,0.000019958712,0.000040084913,0.000021502612],"domain_scores_gemma":[0.99987745,0.00004227267,0.000022001412,0.000005866447,0.00002768716,0.000024715771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021931739,0.0006078725,0.0005360699,0.001102661,0.00028771904,0.00091643597,0.00054080255,0.0007717806,0.010228733],"category_scores_gemma":[0.0003659635,0.00014081433,0.00033778147,0.0013429718,0.00047490856,0.00075837516,0.0005672303,0.00087605184,0.0044335336],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002875771,0.0000978623,0.0013848188,0.006616478,0.000055523542,0.0010307546,0.00015513311,0.00043542436,0.022170547,0.0062968824,0.07391317,0.88755584],"study_design_scores_gemma":[0.000008796585,0.0001713896,0.0035226615,0.00055482436,0.000030023168,0.001877413,0.0000640821,0.000043659962,0.0017057764,0.001803072,0.990207,0.000011329863],"about_ca_topic_score_codex":0.0006790477,"about_ca_topic_score_gemma":0.00061975623,"teacher_disagreement_score":0.010228733,"about_ca_system_score_codex":0.0004249731,"about_ca_system_score_gemma":0.0005584307,"threshold_uncertainty_score":0.03421849},"labels":[],"label_agreement":null},{"id":"W1971581880","doi":"10.1007/s00018-009-0251-8","title":"Selective effect of burn injury on splenic CD11c+ dendritic cells and CD8α+CD4−CD11c+ dendritic cell subsets","year":2010,"lang":"en","type":"article","venue":"Cellular and Molecular Life Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Fondation des pompiers du Québec pour les grands brûlés","keywords":"CD11c; TLR4; Dendritic cell; Burn injury; CD8; Acquired immune system; Immune system; Immunology; Stimulation; Toll-like receptor; CD86; Cell biology; T cell; Biology; Chemistry; Medicine; Innate immune system; Endocrinology; Biochemistry","score_opus":0.003812091999926907,"score_gpt":0.22032912918958067,"score_spread":0.21651703718965376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971581880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965965,0.0010315474,0.0005105612,0.00010301348,0.000075635566,0.0000290943,0.00023466171,0.000038066315,0.0013808344],"genre_scores_gemma":[0.99369615,0.0008870557,0.0007063789,0.00014203474,0.00004770261,0.00006647454,0.00044304613,0.000021237667,0.0039898595],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965215,0.000051320545,0.000024063873,0.000046390698,0.000049069604,0.00017702508],"domain_scores_gemma":[0.999696,0.000051990013,0.000033610842,0.00005999013,0.00002680431,0.00013164598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002655172,0.0006523352,0.0006271268,0.0003037462,0.00035344163,0.00039219204,0.00020884127,0.00046259366,0.0043502976],"category_scores_gemma":[0.00022807569,0.0002484112,0.00040852537,0.00022787615,0.0004014508,0.00034572833,0.0002552302,0.0013246608,0.00059079996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007850034,0.00042563118,0.000491938,0.00012251761,0.000018690569,0.000094579606,0.000059976206,0.00012468445,0.98622626,0.00015828261,0.00016119279,0.0042660525],"study_design_scores_gemma":[0.00019253102,0.0038866436,0.01074299,0.000022862698,0.000063456886,0.0003165038,0.00019239372,0.0006556247,0.9825613,0.00010532368,0.0012518459,0.000008510906],"about_ca_topic_score_codex":0.00071840896,"about_ca_topic_score_gemma":0.0015369677,"teacher_disagreement_score":0.0043502976,"about_ca_system_score_codex":0.00025900657,"about_ca_system_score_gemma":0.0004591643,"threshold_uncertainty_score":0.014553189},"labels":[],"label_agreement":null},{"id":"W1971732539","doi":"10.1086/425079","title":"Toll‐Like Receptor (TLR)–3, but Not TLR4, Agonist Protects against Genital Herpes Infection in the Absence of Inflammation Seen with CpG DNA","year":2004,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":136,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Health Sciences Centre; McMaster University Medical Centre","funders":"","keywords":"TLR9; TLR3; TLR4; CpG Oligodeoxynucleotide; TLR7; Toll-like receptor; Immunology; TLR2; Inflammation; Biology; Innate immune system; CpG site; Virology; Herpes simplex virus; Virus; Immune system; Gene expression; Gene","score_opus":0.00596479270424296,"score_gpt":0.21087434071624636,"score_spread":0.2049095480120034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971732539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959065,0.0014726466,0.0011725862,0.00012439465,0.000052571042,0.000020267033,0.00010759404,0.00006277449,0.0010807426],"genre_scores_gemma":[0.9945293,0.0010812177,0.0016793335,0.000100171776,0.00003151467,0.000028015087,0.0002801756,0.000016006052,0.0022541971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984133,0.000045401728,0.000010074537,0.000017008608,0.000025201974,0.00006089669],"domain_scores_gemma":[0.999864,0.00002665186,0.000032846656,0.000024798166,0.000010908244,0.000040730763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021209597,0.00042781615,0.00029797578,0.00020330248,0.00013451798,0.00024927032,0.00015427083,0.00028493002,0.0016535036],"category_scores_gemma":[0.00019435691,0.00017609885,0.00022061857,0.000095676405,0.0002490463,0.00017238999,0.0001874089,0.00066983065,0.00040574977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003501598,0.000061170635,0.00012628385,0.000051442403,0.00000520645,0.000028246104,0.00000963277,0.000037467,0.99739134,0.000038043992,0.000045865967,0.001855042],"study_design_scores_gemma":[0.00006452483,0.0023936243,0.003337977,0.000018696455,0.000019771362,0.00033386488,0.000033770742,0.000382717,0.99132884,0.00009564039,0.0019851348,0.0000054582015],"about_ca_topic_score_codex":0.00015299079,"about_ca_topic_score_gemma":0.0002616165,"teacher_disagreement_score":0.0016535036,"about_ca_system_score_codex":0.00013103418,"about_ca_system_score_gemma":0.00021128135,"threshold_uncertainty_score":0.00553149},"labels":[],"label_agreement":null},{"id":"W1971932400","doi":"10.1007/s00441-010-1032-2","title":"Monocyte and macrophage heterogeneity and Toll-like receptors in the lung","year":2010,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Innate immune system; Macrophage; CCL18; Immunology; Receptor; Immune system; Biology; Acquired immune system; Toll-like receptor; Phagocytosis; Monocyte; Immune receptor; Pattern recognition receptor; Cell biology","score_opus":0.05929097081881155,"score_gpt":0.383121433522331,"score_spread":0.32383046270351945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971932400","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007975757,0.9990495,0.00008923288,0.0002429268,0.00024345213,0.0000016467674,0.000008420291,0.0000027059225,0.0002823935],"genre_scores_gemma":[0.0005116879,0.9980362,0.00014395367,0.00017947746,0.00053303107,0.0000036336405,0.000020966068,7.789297e-7,0.00057024165],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999813,0.000025614314,0.000030460827,0.000041530802,0.00007012552,0.00001925269],"domain_scores_gemma":[0.9996333,0.00014028247,0.000055362307,0.000012712424,0.00010822897,0.000050037146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081127544,0.0010640068,0.0018797948,0.0017779457,0.000244549,0.0011693081,0.0010620701,0.0015340135,0.0018747261],"category_scores_gemma":[0.0006657737,0.00036840048,0.00028862405,0.0022238565,0.0008853066,0.0018725627,0.00078875764,0.002023159,0.0018459826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023335284,0.00006737188,0.00033519513,0.00893763,0.000058872803,0.00039621265,0.00004847587,0.0003652692,0.0060850168,0.0046151085,0.052527368,0.9263301],"study_design_scores_gemma":[0.000045371118,0.00011539752,0.0017880098,0.0019872147,0.00010242586,0.0027263996,0.00009857058,0.0001474952,0.0011276837,0.0038611314,0.98796755,0.000032738615],"about_ca_topic_score_codex":0.0012131846,"about_ca_topic_score_gemma":0.0024070195,"teacher_disagreement_score":0.0018797948,"about_ca_system_score_codex":0.00085092237,"about_ca_system_score_gemma":0.001230032,"threshold_uncertainty_score":0.006271541},"labels":[],"label_agreement":null},{"id":"W1972044159","doi":"10.1002/eji.200737340","title":"Molecular mechanisms underlying the synergistic induction of CXCL10 by LPS and IFN‐γ in human neutrophils","year":2007,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Associazione Italiana per la Ricerca sul Cancro; Arthritis Society","keywords":"CXCL10; Chemokine; Lipopolysaccharide; STAT1; Biology; TLR4; Cell biology; Immunology; Molecular biology; Interferon; Signal transduction; Immune system","score_opus":0.013683540519574107,"score_gpt":0.24120739147948161,"score_spread":0.22752385095990751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972044159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97130394,0.013111745,0.010850138,0.0007905245,0.00010785118,0.00024546008,0.00056910573,0.00012822078,0.0028930982],"genre_scores_gemma":[0.98928905,0.0038224983,0.0042673443,0.00012634482,0.00005158567,0.00024807328,0.00046521993,0.000008705065,0.0017213722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997249,0.00010615093,0.000022039401,0.00003140953,0.000048272257,0.000067138695],"domain_scores_gemma":[0.9998641,0.000028109816,0.000048688456,0.000013514507,0.000016654532,0.000028951383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003420946,0.0004459926,0.00028219435,0.00025238853,0.00015178071,0.00038191382,0.00019746911,0.0003510589,0.001669735],"category_scores_gemma":[0.00018447032,0.00026241213,0.00033181565,0.00011822229,0.00027056402,0.0002817938,0.00030760374,0.00040960766,0.0006377553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000791965,0.000084314765,0.0012247153,0.00013559917,0.000010301738,0.00035666354,0.000034263627,0.00019163461,0.9926224,0.00042558185,0.00014461477,0.0039779684],"study_design_scores_gemma":[0.0003697647,0.0014502921,0.04152466,0.00006901552,0.00008121266,0.0024536266,0.00020111831,0.0044506933,0.94165415,0.0010873617,0.0066369935,0.000021120388],"about_ca_topic_score_codex":0.00026797727,"about_ca_topic_score_gemma":0.00030991982,"teacher_disagreement_score":0.001669735,"about_ca_system_score_codex":0.0004515187,"about_ca_system_score_gemma":0.00035430698,"threshold_uncertainty_score":0.0055857897},"labels":[],"label_agreement":null},{"id":"W1972351486","doi":"10.1111/j.1365-2567.2004.01938.x","title":"TLR9<sup>−/−</sup> and TLR9<sup>+/+</sup> mice display similar immune responses to a DNA vaccine","year":2004,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of British Columbia; The Metabolomics Innovation Centre","funders":"","keywords":"TLR9; Toll-Like Receptor 9; Immunogenicity; Immune system; DNA vaccination; CpG site; Biology; Adjuvant; Antigen; Immunization; Plasmid; Immunity; Immunology; DNA; Gene; Genetics; DNA methylation","score_opus":0.0072699200403475136,"score_gpt":0.23364425651845322,"score_spread":0.2263743364781057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972351486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986134,0.0007168152,0.006235789,0.0005916783,0.00013035501,0.00014321858,0.0024700696,0.00033889024,0.0032391227],"genre_scores_gemma":[0.95549643,0.0010799745,0.012343297,0.00080795947,0.00012555701,0.0005066403,0.005210384,0.0003702403,0.024059655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992404,0.00014445858,0.00012253881,0.000173211,0.000152778,0.00016656426],"domain_scores_gemma":[0.99865305,0.00016016304,0.00057570974,0.00015654763,0.00006317988,0.00039128755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053884904,0.0013975186,0.0005888085,0.0016710503,0.00035370167,0.0008961833,0.0004756464,0.0015217483,0.00657788],"category_scores_gemma":[0.00027649355,0.0005756148,0.0006719986,0.0002722496,0.0012053967,0.00077278377,0.00043159077,0.0027105634,0.0018700031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001025355,0.0004340956,0.0003692755,0.000069078094,0.000018061304,0.0001355319,0.0000288267,0.000116825664,0.9960956,0.00055456185,0.0001342729,0.0010185775],"study_design_scores_gemma":[0.00029348163,0.0029961746,0.0061029084,0.00004034828,0.000053522264,0.0019663938,0.00013194187,0.0013964248,0.9822384,0.00063576567,0.004115391,0.000029305973],"about_ca_topic_score_codex":0.0002462089,"about_ca_topic_score_gemma":0.0003519323,"teacher_disagreement_score":0.00657788,"about_ca_system_score_codex":0.0003936217,"about_ca_system_score_gemma":0.00022117101,"threshold_uncertainty_score":0.0220052},"labels":[],"label_agreement":null},{"id":"W1972650082","doi":"10.1152/ajpregu.00378.2003","title":"Interleukin-10 concentration determined by sandwich enzyme-linked immunosorbent assay is unrepresentative of bioactivity in murine blood","year":2003,"lang":"en","type":"article","venue":"American Journal of Physiology-Regulatory, Integrative and Comparative Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Bioassay; Immunoassay; Chromatography; Chemistry; Whole blood; Serum concentration; Cytokine; Enzyme; Pharmacology; Immunology; Biology; Endocrinology; Antibody; Biochemistry","score_opus":0.013835025968854841,"score_gpt":0.27246159955461485,"score_spread":0.25862657358576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1972650082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84095275,0.007501239,0.1428436,0.00041790676,0.0008562685,0.00047857375,0.001299421,0.0013082187,0.004341972],"genre_scores_gemma":[0.8823959,0.0027004194,0.10527966,0.00055349246,0.0003714543,0.0015996777,0.0020731892,0.00016151488,0.004864701],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959559,0.0011042538,0.00047345532,0.00093118794,0.0011340328,0.0004010939],"domain_scores_gemma":[0.9965809,0.0011999764,0.000610042,0.0008069476,0.0005276129,0.00027458594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025182085,0.0013332563,0.001064458,0.00095832336,0.0003391663,0.0009103696,0.00053448393,0.0012937044,0.001750985],"category_scores_gemma":[0.002379141,0.0006406881,0.00039823528,0.0005238508,0.0007150665,0.00053840136,0.00041647564,0.002309428,0.0010939805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002121127,0.00008677015,0.00072949746,0.000047300226,0.00001255439,0.000019865132,0.000030997206,0.000038369857,0.99718624,0.00004298979,0.00003972907,0.0015534741],"study_design_scores_gemma":[0.000040775325,0.0017738272,0.007152179,0.000014894433,0.000044327517,0.00017320648,0.000025104304,0.00090874435,0.988937,0.00009808273,0.0008171858,0.000014608286],"about_ca_topic_score_codex":0.00019951613,"about_ca_topic_score_gemma":0.00043010115,"teacher_disagreement_score":0.0025182085,"about_ca_system_score_codex":0.00032068815,"about_ca_system_score_gemma":0.00029607958,"threshold_uncertainty_score":0.013317704},"labels":[],"label_agreement":null},{"id":"W1973762483","doi":"10.1016/j.pep.2006.05.015","title":"Preparation and characterization of truncated human lipopolysaccharide-binding protein in Escherichia coli","year":2006,"lang":"en","type":"article","venue":"Protein Expression and Purification","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Ministry of Education, Culture, Sports, Science and Technology","keywords":"Lipid A; Escherichia coli; Bacterial outer membrane; Lipopolysaccharide; Recombinant DNA; Fusion protein; Biology; Biochemistry; Binding protein; Chemistry; Molecular biology","score_opus":0.00995191394714918,"score_gpt":0.2432774419353154,"score_spread":0.23332552798816622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973762483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696284,0.0017992083,0.022509353,0.0006675893,0.00016449632,0.00017108076,0.0038106008,0.00018194961,0.0010673542],"genre_scores_gemma":[0.93173504,0.0018722821,0.03664346,0.00042596887,0.00005269963,0.00023047751,0.020526806,0.00017589376,0.008337422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996562,0.00007913422,0.000050074093,0.000052348438,0.00008910945,0.00007310829],"domain_scores_gemma":[0.9995993,0.0000986415,0.00006080489,0.000081964536,0.00009007195,0.000069281814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043501807,0.00071105006,0.0007274068,0.00037171133,0.00036065414,0.0006446252,0.00063657784,0.00050640997,0.000581088],"category_scores_gemma":[0.0006314745,0.0003117218,0.0005116257,0.0006983238,0.00031316053,0.00035099327,0.00036382396,0.0012102085,0.00084543915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019870704,0.00007306929,0.00027378692,0.000074873446,0.000014772929,0.00011657101,0.00004798843,0.0003355717,0.9973189,0.00021633183,0.00012571631,0.0012037322],"study_design_scores_gemma":[0.000022838536,0.0001224583,0.003986543,0.00001750617,0.00002695874,0.00030195538,0.00008316795,0.0020491043,0.98816407,0.00012909417,0.005079375,0.000016900685],"about_ca_topic_score_codex":0.0030187154,"about_ca_topic_score_gemma":0.0016770741,"teacher_disagreement_score":0.0030187154,"about_ca_system_score_codex":0.00080660806,"about_ca_system_score_gemma":0.0005563969,"threshold_uncertainty_score":0.0060022473},"labels":[],"label_agreement":null},{"id":"W1973951307","doi":"10.1051/medsci/20031910981","title":"Rôle de la réponse immunitaire innée dans le cerveau","year":2003,"lang":"fr","type":"review","venue":"médecine/sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"","keywords":"Innate immune system; Neurodegeneration; Microglia; Neuroscience; Biology; Inflammation; Central nervous system; Immune system; Immunity; Nervous system; Immunology; Medicine; Disease; Pathology","score_opus":0.026610116963466584,"score_gpt":0.3079819236128609,"score_spread":0.2813718066493943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973951307","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029437238,0.9979373,0.00016429885,0.00016954045,0.0001843622,0.0000019098338,0.0000046989094,0.000004556972,0.0012389995],"genre_scores_gemma":[0.0037999735,0.99348336,0.00028508797,0.00018097082,0.00040210638,0.000007758946,0.000015316176,0.000002301265,0.0018231586],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981767,0.000034166565,0.00002119958,0.000047373374,0.000057328456,0.000022292737],"domain_scores_gemma":[0.99981433,0.0000823284,0.000031928685,0.000006907176,0.000042411368,0.000022036516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041981734,0.00083388283,0.0011581376,0.0016584496,0.00041009136,0.0013034939,0.0007337326,0.0017823873,0.0023186645],"category_scores_gemma":[0.00041984158,0.00020679027,0.0003225718,0.0010530375,0.0012198781,0.0011543884,0.00048533417,0.0014611878,0.002170492],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001105178,0.000044796587,0.0005406693,0.0071990723,0.000043674492,0.0017372092,0.00021418552,0.00045015986,0.0106801735,0.0083734235,0.012783901,0.9578222],"study_design_scores_gemma":[0.000016242695,0.00013718198,0.0024456733,0.0021676861,0.0000501059,0.0084224995,0.00016288187,0.00011547829,0.0035210494,0.0034470765,0.9794892,0.000024992898],"about_ca_topic_score_codex":0.002642794,"about_ca_topic_score_gemma":0.0019681156,"teacher_disagreement_score":0.002642794,"about_ca_system_score_codex":0.0009635676,"about_ca_system_score_gemma":0.00085405546,"threshold_uncertainty_score":0.0077566504},"labels":[],"label_agreement":null},{"id":"W1974182444","doi":"10.1097/01.shk.0000191344.21228.b6","title":"THE EFFECTS OF GRANULOCYTE COLONY-STIMULATING FACTOR IN PRECLINICAL MODELS OF INFECTION AND ACUTE INFLAMMATION","year":2005,"lang":"en","type":"review","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Medicine; Granulocyte colony-stimulating factor; Pneumonia; Immunology; Cytokine; Clinical trial; Disease; Adjuvant; Intensive care medicine; Pharmacology; Internal medicine; Chemotherapy","score_opus":0.03403282958671913,"score_gpt":0.3418973637700745,"score_spread":0.30786453418335535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974182444","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001560529,0.9973719,0.00018720278,0.00021612845,0.00008220211,0.000099879464,0.00015557917,0.0000063874986,0.000320081],"genre_scores_gemma":[0.018389937,0.9785624,0.0012001344,0.0009670344,0.00015928595,0.00028811838,0.00025261228,0.000005745107,0.00017465267],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99488705,0.0022967488,0.0012780394,0.00030462703,0.0011511442,0.000082434824],"domain_scores_gemma":[0.986753,0.0079852855,0.0034278166,0.00030155873,0.0013229377,0.0002094002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0069759805,0.00072526344,0.0032656237,0.0025346675,0.00019834886,0.0011354937,0.0006356706,0.00097170385,0.0011932497],"category_scores_gemma":[0.011344037,0.0002983146,0.0022592677,0.0024450063,0.00060202007,0.00082985725,0.00048185774,0.00095731905,0.0002544743],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032073974,0.00034475356,0.0021106182,0.57678294,0.0077015245,0.00029160755,0.0001918406,0.0003795681,0.012460777,0.0012780662,0.0052742334,0.38997665],"study_design_scores_gemma":[0.0033595832,0.022851555,0.037943203,0.43487066,0.07227732,0.0030474456,0.00081075745,0.000618808,0.021151256,0.0057520303,0.3970458,0.00027165015],"about_ca_topic_score_codex":0.0009702912,"about_ca_topic_score_gemma":0.0025081316,"teacher_disagreement_score":0.0069759805,"about_ca_system_score_codex":0.0007644434,"about_ca_system_score_gemma":0.0026245308,"threshold_uncertainty_score":0.03689295},"labels":[],"label_agreement":null},{"id":"W1974196439","doi":"10.1074/jbc.m500244200","title":"Differential Involvement of Calmodulin-dependent Protein Kinase II-activated AP-1 and c-Jun N-terminal Kinase-activated EGR-1 Signaling Pathways in Tumor Necrosis Factor-α and Lipopolysaccharide-induced CD44 Expression in Human Monocytic Cells","year":2005,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Proinflammatory cytokine; Tumor necrosis factor alpha; Cell biology; Biology; Protein kinase A; Signal transduction; Transcription factor; Kinase; Inflammation; Immunology; Biochemistry","score_opus":0.028169405801879762,"score_gpt":0.24578373341006599,"score_spread":0.21761432760818622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974196439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98265934,0.008086792,0.006175188,0.00024445684,0.00008731487,0.00007944182,0.0005264912,0.000074319025,0.0020667578],"genre_scores_gemma":[0.98778653,0.0031673904,0.0040252325,0.00014052683,0.00003332248,0.00018553027,0.00084393,0.000011875641,0.0038056471],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997918,0.00002180887,0.000017210808,0.00004288231,0.000057188277,0.000069117224],"domain_scores_gemma":[0.99988174,0.000012913583,0.000034493052,0.000008451185,0.000024915807,0.000037483936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001540148,0.00038115183,0.0002721328,0.00030956752,0.0002266102,0.00037249704,0.00025421966,0.0003537204,0.0012091082],"category_scores_gemma":[0.00016767066,0.00018025078,0.00041451387,0.00020922555,0.00023227521,0.00044098927,0.00023635522,0.000616926,0.0003780455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028503657,0.000035257235,0.00024555292,0.000092111506,0.0000047807125,0.00009407024,0.0000439965,0.000036680784,0.9976133,0.00016559892,0.000032637636,0.0013509532],"study_design_scores_gemma":[0.00014740515,0.0005055263,0.037309,0.000030167952,0.000061822626,0.0009375247,0.00018931042,0.0028643978,0.9523586,0.0004310397,0.005146955,0.000018192519],"about_ca_topic_score_codex":0.0006490997,"about_ca_topic_score_gemma":0.00059134496,"teacher_disagreement_score":0.0012091082,"about_ca_system_score_codex":0.00037325275,"about_ca_system_score_gemma":0.00038648394,"threshold_uncertainty_score":0.0040448904},"labels":[],"label_agreement":null},{"id":"W1974783559","doi":"10.1016/j.clim.2012.09.004","title":"Human platelets can discriminate between various bacterial LPS isoforms via TLR4 signaling and differential cytokine secretion","year":2012,"lang":"en","type":"article","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":139,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Platelet; Innate immune system; TLR4; Secretion; Cell biology; Cytokine; Platelet activation; Biology; Immunology; Inflammation; Stimulation; Receptor; Immune system; Microbiology; Biochemistry; Endocrinology","score_opus":0.031781918880669655,"score_gpt":0.30482170226806227,"score_spread":0.2730397833873926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1974783559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908235,0.002582773,0.0022811354,0.0003358944,0.00009833133,0.00009438187,0.00047999938,0.00003524261,0.0032685872],"genre_scores_gemma":[0.99297696,0.0010846249,0.0014782709,0.00031299575,0.00011640959,0.000104159975,0.0011467239,0.0000146222355,0.0027652406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956566,0.000167258,0.000035286503,0.000046210513,0.00008427088,0.00010134277],"domain_scores_gemma":[0.9997687,0.00009308901,0.00003890417,0.000036852663,0.00003161011,0.000030957795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003607224,0.0003682363,0.00026470813,0.0003202076,0.00012467786,0.0007067217,0.00020094763,0.000492966,0.0030356583],"category_scores_gemma":[0.00083228725,0.00025414428,0.0003769892,0.0002264959,0.0001555371,0.00035717216,0.0004278759,0.00078248634,0.0012855368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0043578204,0.00021032245,0.0052724956,0.00016139384,0.00006796895,0.0005923926,0.00017569412,0.00018593915,0.96680784,0.0004748913,0.0007558532,0.020937296],"study_design_scores_gemma":[0.0009388355,0.0070113577,0.08265293,0.00012594814,0.000355501,0.0043603564,0.0005560814,0.0032794885,0.88694406,0.0015772246,0.012146075,0.000052191983],"about_ca_topic_score_codex":0.00020127057,"about_ca_topic_score_gemma":0.0001903202,"teacher_disagreement_score":0.0030356583,"about_ca_system_score_codex":0.00013220249,"about_ca_system_score_gemma":0.00014049002,"threshold_uncertainty_score":0.01015532},"labels":[],"label_agreement":null},{"id":"W1975127669","doi":"10.1016/j.bmc.2013.02.024","title":"Improving the immunostimulatory potency of diethanolamine-containing lipid A mimics","year":2013,"lang":"en","type":"article","venue":"Bioorganic & Medicinal Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"","keywords":"Chemistry; Lipid A; Diethanolamine; TLR4; Biochemistry; Lipopolysaccharide; Toll-like receptor; Receptor; Innate immune system; Biology; Immunology","score_opus":0.006430209570671177,"score_gpt":0.19556937507353145,"score_spread":0.18913916550286028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975127669","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945515,0.0007656535,0.002529023,0.00008682378,0.000025350308,0.000037148213,0.00009112218,0.000042696458,0.00187065],"genre_scores_gemma":[0.9959781,0.0006293742,0.0020254666,0.00006335242,0.0000059004865,0.000020971376,0.000081859114,0.000006790862,0.00118808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995255,0.000009701761,0.000004744259,0.000008943785,0.000009112727,0.00001498871],"domain_scores_gemma":[0.9999565,0.000010356587,0.0000110926785,0.0000046362993,0.0000060988414,0.0000114043005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104405895,0.00021545171,0.00011619823,0.0001149691,0.000095220035,0.0001777853,0.00020236778,0.00023212399,0.0010004062],"category_scores_gemma":[0.00014271667,0.000080210135,0.0001202926,0.00010320757,0.00009526282,0.00022749494,0.00021024523,0.00029697633,0.00022964855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022031953,0.00003546545,0.00005557852,0.000037777765,0.0000042853385,0.000041280477,0.000010496872,0.00020863174,0.9962064,0.00029536017,0.00004199498,0.0028424428],"study_design_scores_gemma":[0.000018725677,0.00029972973,0.00020960777,0.000003075313,0.000007380551,0.000046633308,0.0000058060864,0.00048165992,0.9976421,0.000040809897,0.0012408699,0.0000036533347],"about_ca_topic_score_codex":0.00029423417,"about_ca_topic_score_gemma":0.0003369793,"teacher_disagreement_score":0.0010004062,"about_ca_system_score_codex":0.00018544648,"about_ca_system_score_gemma":0.00014648547,"threshold_uncertainty_score":0.0033466816},"labels":[],"label_agreement":null},{"id":"W1975316538","doi":"10.1042/bst0351375","title":"Toll-like receptor 4 regulates colitis-associated adenocarcinoma development in interleukin-10-deficient (IL-10−/−) mice","year":2007,"lang":"en","type":"review","venue":"Biochemical Society Transactions","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Colitis; Immunology; TLR4; Inflammatory bowel disease; Adenocarcinoma; Exacerbation; Ulcerative colitis; Toll-like receptor; Immune system; Medicine; Cancer research; Biology; Cancer; Innate immune system; Disease; Internal medicine","score_opus":0.030664960912961656,"score_gpt":0.2776625184988175,"score_spread":0.24699755758585584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975316538","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018133072,0.9932941,0.00082113774,0.00033880692,0.00035517715,0.000013570264,0.00004022516,0.000046676203,0.003276995],"genre_scores_gemma":[0.0061549223,0.9890688,0.0007318798,0.00021854104,0.0001768033,0.000020052585,0.00008639703,0.000005746801,0.0035368956],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999094,0.000012019061,0.000012192207,0.000020443864,0.00003284082,0.0000131069755],"domain_scores_gemma":[0.99989545,0.000019478732,0.000029593062,0.000004188967,0.00002715366,0.000024168776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002829255,0.00089855725,0.0009510661,0.00084882416,0.00016370554,0.0005693652,0.0008049621,0.00080572884,0.0021914376],"category_scores_gemma":[0.00017824105,0.00024763064,0.00023368467,0.00076929224,0.00038342996,0.0006756033,0.00032037767,0.0010303967,0.002861225],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037608875,0.00009482176,0.00036300157,0.008601417,0.00006607819,0.0006657676,0.00005887662,0.00074661546,0.054052733,0.003570145,0.020880057,0.91052437],"study_design_scores_gemma":[0.000096398064,0.00027878385,0.0034168407,0.0008877756,0.000113273345,0.002726824,0.000058322472,0.0002848099,0.014023709,0.0020484617,0.97603434,0.00003053611],"about_ca_topic_score_codex":0.00040381038,"about_ca_topic_score_gemma":0.0006160532,"teacher_disagreement_score":0.0021914376,"about_ca_system_score_codex":0.00048849185,"about_ca_system_score_gemma":0.00044970322,"threshold_uncertainty_score":0.0073310733},"labels":[],"label_agreement":null},{"id":"W1975396221","doi":"10.1016/j.vetimm.2003.10.001","title":"In vivo immunostimulatory effects of CpG oligodeoxynucleotide in cattle and sheep","year":2003,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"CpG Oligodeoxynucleotide; In vivo; Biology; CpG site; Innate immune system; Immune system; In vitro; Immunology; Molecular biology; Biochemistry; DNA methylation","score_opus":0.00646388322905993,"score_gpt":0.22706045369470335,"score_spread":0.2205965704656434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975396221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987992,0.0004515415,0.00020491894,0.0000384956,0.000022253744,0.000009662894,0.000047338115,0.0000066240814,0.00041997046],"genre_scores_gemma":[0.9970433,0.0004905334,0.0003074209,0.000041886327,0.000030007894,0.000030510693,0.000134727,0.0000070699825,0.0019145554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996995,0.000089396846,0.00001939407,0.000057315778,0.00004039343,0.000094035924],"domain_scores_gemma":[0.99934024,0.00034726356,0.00007923281,0.00004620071,0.000048373615,0.00013864395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005443881,0.000439974,0.00049080147,0.00036569772,0.00021944121,0.00028809565,0.0002452979,0.0007234611,0.0009002708],"category_scores_gemma":[0.00063508074,0.00030126248,0.00020232398,0.00013451734,0.00056767976,0.00026465007,0.000121009696,0.0011368672,0.00031434564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004546764,0.00035408087,0.00055093574,0.00007386026,0.000012281923,0.00016515735,0.00015922094,0.00015163411,0.9915394,0.000056326306,0.000041084575,0.0023491913],"study_design_scores_gemma":[0.00068108045,0.03735524,0.01862058,0.00005257636,0.0001560595,0.00083689037,0.00046523716,0.0019764982,0.93729484,0.00021531241,0.002316546,0.000029016794],"about_ca_topic_score_codex":0.0015951018,"about_ca_topic_score_gemma":0.0019143304,"teacher_disagreement_score":0.0015951018,"about_ca_system_score_codex":0.00029577376,"about_ca_system_score_gemma":0.00027248124,"threshold_uncertainty_score":0.0031715631},"labels":[],"label_agreement":null},{"id":"W1975578777","doi":"10.1007/s10753-010-9253-9","title":"Acute Lung Inflammation in Klebsiella pneumoniae B5055-Induced Pneumonia and Sepsis in BALB/c Mice: A Comparative Study","year":2010,"lang":"en","type":"article","venue":"Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Indian Council of Medical Research","keywords":"Pneumonia; Sepsis; Inflammation; Lung; Klebsiella pneumoniae; Medicine; Immunology; Klebsiella pneumonia; Immune system; Bacterial pneumonia; Fibrin; Microbiology; Biology; Bacteria; Pseudomonas aeruginosa; Internal medicine; Escherichia coli","score_opus":0.01178603430390341,"score_gpt":0.28110170422377684,"score_spread":0.26931566991987343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975578777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940011,0.0033050634,0.0007841421,0.0000622991,0.000031965777,0.00008528524,0.00052020315,0.000024290628,0.0011855691],"genre_scores_gemma":[0.9937239,0.002131371,0.0012508904,0.00010365376,0.000043404212,0.000117788586,0.0006091169,0.000014774526,0.0020051615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994186,0.00010928958,0.000053955726,0.00011388122,0.000090751426,0.0002134994],"domain_scores_gemma":[0.99959546,0.00004702188,0.00010021371,0.000047115427,0.00004113135,0.00016907073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007962207,0.0010755397,0.0006281422,0.0015952019,0.0005234226,0.00046613457,0.000481075,0.0010827958,0.001338746],"category_scores_gemma":[0.00022084122,0.0005079207,0.0007831312,0.0005517803,0.0010224315,0.0011287476,0.0004080563,0.0011647729,0.0003515165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056772623,0.00067312387,0.0014031107,0.00015940577,0.000018870682,0.00042567513,0.00008698712,0.000101047895,0.9893239,0.00027912864,0.00005000221,0.0018014698],"study_design_scores_gemma":[0.0005998934,0.025796456,0.114747375,0.00007532702,0.0002651352,0.0035707674,0.00068207417,0.0012815825,0.849967,0.00036577068,0.0025818779,0.00006671568],"about_ca_topic_score_codex":0.0009959813,"about_ca_topic_score_gemma":0.0013457092,"teacher_disagreement_score":0.0015952019,"about_ca_system_score_codex":0.0005198982,"about_ca_system_score_gemma":0.00040497014,"threshold_uncertainty_score":0.004478574},"labels":[],"label_agreement":null},{"id":"W1975941905","doi":"10.1007/s001340051153","title":"Could anti-inflammatory actions of catecholamines explain the possible beneficial effects of supranormal oxygen delivery in critically ill surgical patients?","year":2000,"lang":"en","type":"review","venue":"Intensive Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Medicine; Hypoxia (environmental); Norepinephrine; Epinephrine; Sepsis; Cytokine; Anesthesia; Oxygen delivery; Critically ill; Intensive care medicine; Animal studies; Pharmacology; Dopamine; Surgery; Internal medicine; Oxygen","score_opus":0.015651112942907473,"score_gpt":0.2869887068125013,"score_spread":0.27133759386959383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975941905","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000117184754,0.9975569,0.00017350078,0.0008693442,0.00075704994,0.0000033529727,0.000009041878,0.0000040763725,0.0005094922],"genre_scores_gemma":[0.00080328,0.9967648,0.00018100649,0.0007024413,0.0011077247,0.000007543735,0.0000144204,0.0000010623837,0.00041779666],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998592,0.000028853172,0.000021000438,0.00002707043,0.000045849145,0.00001802155],"domain_scores_gemma":[0.9993412,0.00039340227,0.00006795949,0.000021664844,0.0001372025,0.00003859915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009162072,0.0011051623,0.0023398842,0.0008520046,0.00031590788,0.0010372649,0.0015043512,0.0024378365,0.0022087083],"category_scores_gemma":[0.0013432378,0.00023744277,0.0006138623,0.00089885184,0.00083632534,0.0016620076,0.00055318396,0.0026671623,0.0017372253],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047199125,0.00014081672,0.000686171,0.013525194,0.00022225741,0.0010903995,0.000083082734,0.00045011204,0.0037229066,0.0067841364,0.04484992,0.92797303],"study_design_scores_gemma":[0.00016857137,0.00029276655,0.0026082627,0.0040466376,0.00031441782,0.0041299756,0.00017146114,0.00025154624,0.0011236296,0.008997254,0.97784925,0.000046156016],"about_ca_topic_score_codex":0.0009865842,"about_ca_topic_score_gemma":0.0016069777,"teacher_disagreement_score":0.0024378365,"about_ca_system_score_codex":0.00059026916,"about_ca_system_score_gemma":0.0010030355,"threshold_uncertainty_score":0.00738889},"labels":[],"label_agreement":null},{"id":"W1975968504","doi":"10.1186/cc7098","title":"A quality assessment of genetic association studies supporting susceptibility and outcome in acute lung injury","year":2008,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Instituto de Salud Carlos III; Fundación Canaria de Investigación y Salud","keywords":"Medicine; Genetic association; Interquartile range; Genetic predisposition; Population; Bioinformatics; Gene; Internal medicine; Genetics; Genotype; Biology; Single-nucleotide polymorphism","score_opus":0.047714036186553566,"score_gpt":0.4191162092270961,"score_spread":0.3714021730405425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975968504","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"methods","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17999086,0.7339275,0.027862206,0.012963851,0.0024017321,0.015532669,0.018446688,0.00035429114,0.008520136],"genre_scores_gemma":[0.8495965,0.06544024,0.06214002,0.0023656099,0.0007272581,0.0125857,0.0065565496,0.00009898423,0.0004892158],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.5938732,0.1252166,0.22683123,0.009897399,0.04221186,0.0019697007],"domain_scores_gemma":[0.19949327,0.5311316,0.14979619,0.021458354,0.09443205,0.0036885524],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.3421887,0.0013772348,0.00819214,0.031464696,0.002474255,0.008375216,0.004621296,0.0029931618,0.0032911394],"category_scores_gemma":[0.56502426,0.0012494839,0.013584311,0.030338177,0.004919601,0.005094015,0.005270171,0.0015149111,0.00031391706],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057419515,0.00015147724,0.36895454,0.38801542,0.04943853,0.0006487524,0.005335784,0.0011653277,0.001950941,0.002498412,0.0063993144,0.16969948],"study_design_scores_gemma":[0.0035570953,0.0035569698,0.52937937,0.23738141,0.15431991,0.0029293597,0.0071368976,0.005304421,0.0033840875,0.009946842,0.042497147,0.00060645],"about_ca_topic_score_codex":0.00508437,"about_ca_topic_score_gemma":0.0063525145,"teacher_disagreement_score":0.6578113,"about_ca_system_score_codex":0.006529387,"about_ca_system_score_gemma":0.010712979,"threshold_uncertainty_score":0.8111985},"labels":[],"label_agreement":null},{"id":"W1976111313","doi":"10.1164/rccm.201403-0586oc","title":"A Functional Synonymous Coding Variant in the <i>IL1RN</i> Gene Is Associated with Survival in Septic Shock","year":2014,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; University of Pennsylvania; National Institutes of Health; National Center for Advancing Translational Sciences; Pennsylvania Department of Health; National Center for Research Resources; American Heart Association","keywords":"Medicine; Septic shock; Gene; Coding (social sciences); Shock (circulatory); Intensive care medicine; Sepsis; Genetics; Internal medicine; Statistics; Biology","score_opus":0.013861188335023283,"score_gpt":0.253486321871757,"score_spread":0.23962513353673373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976111313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982887,0.00032840713,0.00056101196,0.00012132931,0.000017769613,0.00000768107,0.00034267915,0.000013017337,0.00031946631],"genre_scores_gemma":[0.9991967,0.00006130866,0.00032104572,0.000057309844,0.000025316125,0.0000073250967,0.00023017876,0.0000050025474,0.00009579497],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997008,0.00008997833,0.000037906448,0.000106654305,0.0000353771,0.00002927625],"domain_scores_gemma":[0.9992884,0.0002406837,0.00030474665,0.00004978687,0.000034805333,0.000081621765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038142625,0.0003624456,0.00026773158,0.00030161825,0.00030826457,0.00025774358,0.0002553636,0.0005397921,0.0023316103],"category_scores_gemma":[0.00093099044,0.000096475655,0.0002444709,0.0005416514,0.0004047326,0.00011401861,0.00019258946,0.0003391063,0.00021123321],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004742621,0.00012939263,0.9078482,0.00014817166,0.0005692087,0.0018248165,0.0001618664,0.00093195227,0.07282379,0.00038353406,0.00081439177,0.009622011],"study_design_scores_gemma":[0.00014077016,0.00061404315,0.98966306,0.000032447675,0.0003619249,0.0035437185,0.00007292446,0.0016643332,0.0026831403,0.00048086792,0.0007221815,0.000020616462],"about_ca_topic_score_codex":0.00082872953,"about_ca_topic_score_gemma":0.0010028535,"teacher_disagreement_score":0.0023316103,"about_ca_system_score_codex":0.00010949313,"about_ca_system_score_gemma":0.00013029769,"threshold_uncertainty_score":0.0078000426},"labels":[],"label_agreement":null},{"id":"W1976130340","doi":"10.1007/s00424-015-1697-1","title":"Activation of Toll-like receptor 3 increases mouse aortic vascular smooth muscle cell contractility through ERK1/2 pathway","year":2015,"lang":"en","type":"article","venue":"Pflügers Archiv - European Journal of Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"New York Institute of Technology","funders":"American Heart Association","keywords":"Vascular smooth muscle; Endocrinology; Contractility; Internal medicine; TLR3; Biology; Chemistry; Receptor; Medicine; Toll-like receptor; Innate immune system","score_opus":0.01721490167804202,"score_gpt":0.21985879480134435,"score_spread":0.20264389312330233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976130340","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955141,0.00083344453,0.0012058683,0.00036684764,0.00012198756,0.000022768369,0.00044175176,0.00008886217,0.0014042873],"genre_scores_gemma":[0.9942496,0.0007155783,0.0012743267,0.00018018045,0.000038849277,0.000087236906,0.00056842144,0.000019392182,0.002866512],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971837,0.000053112457,0.000024577777,0.000035839254,0.000041042633,0.00012706166],"domain_scores_gemma":[0.9998535,0.000021072943,0.00003382552,0.000015945225,0.000010258395,0.00006541677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026951847,0.00059765944,0.000301357,0.0003544747,0.0002413973,0.0002849482,0.00023491668,0.000512244,0.0026445389],"category_scores_gemma":[0.00015594368,0.00029578645,0.0007325403,0.00016178474,0.00033326764,0.0002772255,0.00030788127,0.0016400184,0.00053852814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011894892,0.00015370293,0.00019245638,0.00006667284,0.000014333651,0.00007364493,0.000024937492,0.000063904365,0.99700636,0.00012782025,0.00015158705,0.0009350687],"study_design_scores_gemma":[0.00021391103,0.001503297,0.012423829,0.000022294866,0.000066528446,0.00019489344,0.00011443785,0.0013312176,0.9822428,0.00017889818,0.0016917294,0.00001608739],"about_ca_topic_score_codex":0.0004518007,"about_ca_topic_score_gemma":0.0008444332,"teacher_disagreement_score":0.0026445389,"about_ca_system_score_codex":0.00033024905,"about_ca_system_score_gemma":0.00031039203,"threshold_uncertainty_score":0.008846879},"labels":[],"label_agreement":null},{"id":"W1976268803","doi":"10.1080/10739680590960368","title":"Lipopolysaccharide: A p38 MAPK‐Dependent Disrupter of Neutrophil Chemotaxis","year":2005,"lang":"en","type":"article","venue":"Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chemotaxis; Chemokine; Lipopolysaccharide; p38 mitogen-activated protein kinases; In vivo; Neutrophil extracellular traps; Immunology; MAPK/ERK pathway; Sepsis; Biology; In vitro; Endogeny; Inflammation; Interleukin 8; Cell biology; Signal transduction; Receptor; Endocrinology; Biochemistry","score_opus":0.007645908018698644,"score_gpt":0.22110688474604875,"score_spread":0.21346097672735012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976268803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98484474,0.003892705,0.007869813,0.0006742564,0.0002275252,0.00013076568,0.0003986031,0.0003219725,0.0016396937],"genre_scores_gemma":[0.98765546,0.0021824092,0.006336245,0.0002092426,0.00006872794,0.00010788548,0.00064517953,0.00002924115,0.0027656413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999833,0.00004721682,0.000020450276,0.000015371174,0.000028749744,0.000055226647],"domain_scores_gemma":[0.9998405,0.00002829144,0.00004529733,0.000021342143,0.000011235038,0.00005337442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031510508,0.0007878762,0.0003054322,0.00023984275,0.0001509361,0.0002613308,0.0002365951,0.0005308621,0.0018862357],"category_scores_gemma":[0.0002248338,0.00021399402,0.00029928202,0.00015352154,0.00038282273,0.00026278142,0.00024753006,0.00091551134,0.00057384325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055036007,0.00021970608,0.00006970758,0.00009645275,0.000005709823,0.00012831876,0.000007777238,0.00008915471,0.99589133,0.00014831322,0.00010011609,0.0026930019],"study_design_scores_gemma":[0.00024222258,0.0022602715,0.0014452348,0.000013092294,0.000018478559,0.00041964118,0.000012611405,0.0010127724,0.992564,0.0001079026,0.0018958946,0.000007878164],"about_ca_topic_score_codex":0.0002853171,"about_ca_topic_score_gemma":0.00033458148,"teacher_disagreement_score":0.0018862357,"about_ca_system_score_codex":0.00028327398,"about_ca_system_score_gemma":0.00037813146,"threshold_uncertainty_score":0.0063101053},"labels":[],"label_agreement":null},{"id":"W1976431071","doi":"10.1016/j.healun.2013.01.844","title":"Regulatory T Cells (Tregs) in Neonatal Tolerance: Allogeneic Tregs Regulate the Neonatal Immune System and Prolong Heart Graft Survival","year":2013,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Immune system; Immune tolerance; Immunology; Regulatory T cell; T cell; IL-2 receptor","score_opus":0.004143452103723766,"score_gpt":0.19909689371694944,"score_spread":0.19495344161322567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976431071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90706563,0.07456633,0.008731507,0.0023131492,0.000866607,0.000047754518,0.0001954799,0.00019573359,0.0060179126],"genre_scores_gemma":[0.98082125,0.014127528,0.0018555583,0.00056220166,0.000416976,0.000049356564,0.00006844871,0.00002480732,0.0020739513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998417,0.000052577263,0.000014342125,0.000019189727,0.000034533074,0.000037684193],"domain_scores_gemma":[0.99980515,0.000036716458,0.000056517376,0.000021541575,0.000024117668,0.000056067285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006635465,0.00034749485,0.00038419646,0.00020654926,0.00016497498,0.00041500825,0.00028605468,0.000440381,0.00083971914],"category_scores_gemma":[0.00045950845,0.000091810296,0.00020432273,0.00012224614,0.00046163666,0.0004388968,0.00033488686,0.0013524829,0.0002052146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028166932,0.00037216145,0.008095445,0.00052363565,0.000050952236,0.0011449143,0.0002577485,0.0010865675,0.84414667,0.014484667,0.0019936692,0.12502682],"study_design_scores_gemma":[0.0005277071,0.008029142,0.053409353,0.00062781083,0.00044475385,0.0066545936,0.00084677344,0.0042537274,0.85168684,0.014105163,0.059343405,0.00007070481],"about_ca_topic_score_codex":0.00014260688,"about_ca_topic_score_gemma":0.00028618673,"teacher_disagreement_score":0.00083971914,"about_ca_system_score_codex":0.0002761916,"about_ca_system_score_gemma":0.00036258835,"threshold_uncertainty_score":0.0035092235},"labels":[],"label_agreement":null},{"id":"W1976644844","doi":"10.1038/nri3565","title":"NOD proteins: regulators of inflammation in health and disease","year":2013,"lang":"en","type":"review","venue":"Nature reviews. Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":647,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"NOD1; Nod; NOD2; Peptidoglycan; Cell biology; Biology; Autophagy; Effector; Inflammation; Immune system; Innate immune system; Bacteria; Genetics; Immunology; Gene","score_opus":0.017302293984621325,"score_gpt":0.3071016856073126,"score_spread":0.2897993916226913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976644844","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000689412,0.99681014,0.00022419285,0.00063855236,0.0009037497,0.0000042733695,0.000025775502,0.000017657254,0.0013067678],"genre_scores_gemma":[0.0004709848,0.9969709,0.0001659199,0.0003374116,0.0006472004,0.0000065209038,0.000052118427,0.0000022447912,0.0013466738],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997459,0.00003103709,0.000026417965,0.00003366635,0.00012265448,0.000040309063],"domain_scores_gemma":[0.9995009,0.00014362478,0.00007678215,0.00001628391,0.00014908887,0.00011340979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074178365,0.0014872915,0.0016283395,0.0018163631,0.00034530868,0.0015856593,0.0014806011,0.0017070157,0.0063610533],"category_scores_gemma":[0.00085271336,0.00038541347,0.00040790584,0.0024103217,0.0008543362,0.0020554378,0.0015213208,0.002954076,0.005486511],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001243758,0.000039930943,0.000116498115,0.0062329597,0.000048323585,0.00017995927,0.000030188436,0.00025591446,0.0024968924,0.0026727102,0.09324331,0.8945589],"study_design_scores_gemma":[0.00001548157,0.000028131251,0.0003844958,0.0012264111,0.00003582719,0.00061613595,0.000035118723,0.000045373643,0.00027163423,0.0016586372,0.9956709,0.00001189716],"about_ca_topic_score_codex":0.0005789875,"about_ca_topic_score_gemma":0.0013234908,"teacher_disagreement_score":0.0063610533,"about_ca_system_score_codex":0.0008531892,"about_ca_system_score_gemma":0.0011955986,"threshold_uncertainty_score":0.021279871},"labels":[],"label_agreement":null},{"id":"W1976914461","doi":"10.1038/cr.2011.84","title":"Coordinate activation of inflammatory gene networks, alveolar destruction and neonatal death in AKNA deficient mice","year":2011,"lang":"en","type":"article","venue":"Cell Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Université de Montréal; Montreal Clinical Research Institute","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; University of Texas MD Anderson Cancer Center; University of California, San Diego; National Institutes of Health","keywords":"Biology; Inflammation; Proinflammatory cytokine; Immunology; Transcription factor; Gene; Cell biology; Genetics","score_opus":0.04107374440593012,"score_gpt":0.2733896309257259,"score_spread":0.23231588651979576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976914461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920299,0.0014475019,0.0043918085,0.00019049321,0.00005519939,0.000024464185,0.0006483212,0.00019151857,0.001020797],"genre_scores_gemma":[0.991098,0.0007593986,0.0034480086,0.000096448966,0.000026649888,0.00009210143,0.0004179683,0.00010933781,0.003952004],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931526,0.00007882408,0.0000783171,0.00022024772,0.00016869305,0.00013869406],"domain_scores_gemma":[0.99912363,0.00009979825,0.0003654056,0.00010861684,0.00005266678,0.00024984125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035050124,0.00078032917,0.00069088873,0.0015473944,0.00042214815,0.0010685286,0.0007228054,0.00075296743,0.0014310722],"category_scores_gemma":[0.00042443164,0.00054792094,0.00048631636,0.00033630308,0.0011671481,0.0006183408,0.00060505874,0.0015525749,0.00038433255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007141798,0.00004802169,0.0006502858,0.0000249677,0.000010717173,0.00027770846,0.00003405748,0.00012973427,0.9967547,0.0003508546,0.00004298639,0.0009618551],"study_design_scores_gemma":[0.00012919412,0.000610627,0.021417338,0.000040646297,0.00009904051,0.0023769632,0.00033766273,0.0019135452,0.96928376,0.0015002968,0.0022554751,0.00003552466],"about_ca_topic_score_codex":0.00060308306,"about_ca_topic_score_gemma":0.0014321785,"teacher_disagreement_score":0.0015473944,"about_ca_system_score_codex":0.00069413084,"about_ca_system_score_gemma":0.00044031235,"threshold_uncertainty_score":0.005036235},"labels":[],"label_agreement":null},{"id":"W1977093051","doi":"10.1073/pnas.1303738110","title":"<i>Neisseria gonorrhoeae-</i> derived heptose elicits an innate immune response and drives HIV-1 expression","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Child and Family Research Institute; University of British Columbia; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Neisseria gonorrhoeae; Heptose; Biology; Innate immune system; Microbiology; Lipid A; Bacterial outer membrane; Pathogen-associated molecular pattern; Gonorrhea; Escherichia coli; Mutant; Bacteria; Immune system; Gene; Virology; Biochemistry; Genetics; Human immunodeficiency virus (HIV)","score_opus":0.017137912808440427,"score_gpt":0.2659853138901835,"score_spread":0.24884740108174305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977093051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99158466,0.0013574619,0.001721445,0.00022276676,0.00003918822,0.00003499271,0.0005543215,0.00008066331,0.004404338],"genre_scores_gemma":[0.9947826,0.0005233511,0.001953962,0.00015882848,0.000015128596,0.000017266722,0.00058018084,0.000009548595,0.0019590324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991274,0.0000134629745,0.0000055098767,0.000016880187,0.000025689284,0.000025699477],"domain_scores_gemma":[0.9999627,0.0000054956777,0.000011621487,0.0000043962737,0.000006191804,0.000009707819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006571081,0.00021047748,0.00012887924,0.00008273532,0.00010563516,0.0002674489,0.00008154016,0.00018796153,0.0011066883],"category_scores_gemma":[0.00009756029,0.000069876165,0.0001337109,0.00008025773,0.0001385176,0.00008816619,0.00017838387,0.00027617026,0.00034353917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052437113,0.0000145728745,0.00042515885,0.00002245071,0.0000019912575,0.00004188481,0.000005801904,0.000021938002,0.99810314,0.000079848614,0.00008348804,0.0011471476],"study_design_scores_gemma":[0.000013549327,0.00040867986,0.01811013,0.000014831776,0.000009874281,0.00043113175,0.000068981375,0.000703243,0.9753676,0.00013486667,0.004732018,0.0000050181543],"about_ca_topic_score_codex":0.0008022254,"about_ca_topic_score_gemma":0.0011739882,"teacher_disagreement_score":0.0011066883,"about_ca_system_score_codex":0.00030965314,"about_ca_system_score_gemma":0.00015071435,"threshold_uncertainty_score":0.0037022233},"labels":[],"label_agreement":null},{"id":"W1977356375","doi":"10.1186/cc8240","title":"The TLR4 antagonist CRX-526 reduces LPS-induced leukocyte activation and improves capillary perfusion of the rat intestine","year":2010,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Antagonist; Perfusion; Pharmacology; TLR4; Anesthesia; Internal medicine; Receptor","score_opus":0.009721201230495318,"score_gpt":0.25963986864989064,"score_spread":0.2499186674193953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977356375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99581903,0.0023494905,0.00076771114,0.00020218414,0.000046760055,0.000020384246,0.00011108293,0.00008149416,0.00060183305],"genre_scores_gemma":[0.99327266,0.0024986267,0.0014844398,0.0001289497,0.00004884344,0.00005227563,0.00031356947,0.000022794231,0.0021776895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998721,0.000031370266,0.000009321675,0.000013759959,0.000022579516,0.000050929357],"domain_scores_gemma":[0.9998311,0.000017685416,0.000060134455,0.0000142730405,0.000018166455,0.000058566024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019468984,0.00048701288,0.00068133307,0.0003014751,0.00017738079,0.00026069646,0.0003527275,0.0003886616,0.002214226],"category_scores_gemma":[0.00022626776,0.00020120032,0.00021266397,0.00014066831,0.00029940673,0.0003763976,0.00021384493,0.0010158123,0.00044264193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004027324,0.00059276976,0.00018388228,0.00013303432,0.000016514938,0.00005778679,0.00001644301,0.00012353987,0.98762286,0.000082663646,0.00012598225,0.007017113],"study_design_scores_gemma":[0.0005434644,0.011697628,0.0045255153,0.000021656075,0.00007099454,0.00017254183,0.000054535656,0.00093566335,0.9803538,0.00009570968,0.0015143385,0.000014249124],"about_ca_topic_score_codex":0.00031683932,"about_ca_topic_score_gemma":0.00046158078,"teacher_disagreement_score":0.002214226,"about_ca_system_score_codex":0.00016645443,"about_ca_system_score_gemma":0.00033094056,"threshold_uncertainty_score":0.0074073076},"labels":[],"label_agreement":null},{"id":"W1977613415","doi":"10.1016/j.bbrc.2013.11.119","title":"Murine T cell activation is regulated by surfen (bis-2-methyl-4-amino-quinolyl-6-carbamide)","year":2013,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University","keywords":"IL-2 receptor; T cell; CD28; Molecular biology; Cell growth; Chemistry; In vivo; Glycosaminoglycan; Ionomycin; CD3; Interleukin 2; In vitro; Biochemistry; Biology; Cytotoxic T cell; Immunology; Antigen; Immune system; CD8","score_opus":0.036661330013237584,"score_gpt":0.3091847040723989,"score_spread":0.2725233740591613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977613415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903424,0.0021104352,0.0029933092,0.0001285803,0.000049382208,0.00004756356,0.00031969306,0.00033799408,0.0036708314],"genre_scores_gemma":[0.99594456,0.0004927814,0.0014359494,0.000050206523,0.000018343944,0.000043356948,0.00032809217,0.000058970058,0.0016277645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994312,0.00014223784,0.000028586757,0.000081295715,0.0000957619,0.00022085529],"domain_scores_gemma":[0.99967885,0.00006831234,0.00011207236,0.00004267472,0.000028691686,0.00006941432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033740528,0.0007171995,0.0003538103,0.0005242597,0.00022499764,0.0005574052,0.0004124353,0.0005032317,0.0020427958],"category_scores_gemma":[0.00021283558,0.00029238185,0.0003746672,0.00021583991,0.000465552,0.00027733546,0.00029041353,0.00092844805,0.00086391275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046001843,0.000023349254,0.00007384488,0.000018509434,0.0000026325267,0.000040558654,0.000010523712,0.00004709604,0.9985593,0.00007854309,0.00003068997,0.00065495755],"study_design_scores_gemma":[0.000066787026,0.00038766925,0.0023048362,0.0000070993374,0.000008278212,0.00011989459,0.00001909339,0.0005718771,0.9955408,0.00005270145,0.0009162433,0.000004699034],"about_ca_topic_score_codex":0.00039092626,"about_ca_topic_score_gemma":0.00063081074,"teacher_disagreement_score":0.0020427958,"about_ca_system_score_codex":0.000405265,"about_ca_system_score_gemma":0.0001869226,"threshold_uncertainty_score":0.0068338513},"labels":[],"label_agreement":null},{"id":"W1977921022","doi":"10.1016/j.jpeds.2003.10.034","title":"Primary Immunodeficiency to pneumococcal infection due to a defect in Toll-like receptor signaling","year":2004,"lang":"en","type":"article","venue":"The Journal of Pediatrics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cytokine; Immunology; TLR4; Toll-like receptor; Medicine; Immune system; TLR2; Signal transduction; Receptor; Lipopolysaccharide; Interleukin 10; Streptococcus pneumoniae; Interleukin; Innate immune system; Tumor necrosis factor alpha; Biology; Cell biology; Microbiology; Internal medicine","score_opus":0.00765851758632945,"score_gpt":0.2275287935348472,"score_spread":0.21987027594851774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977921022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986945,0.0018698983,0.0011848946,0.00063179585,0.0001705556,0.00009039491,0.0004777909,0.00013058222,0.008499026],"genre_scores_gemma":[0.99686074,0.00048352315,0.00055352494,0.00024688704,0.00011349219,0.000029846524,0.00021355721,0.000015640375,0.0014828616],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99953187,0.00011832097,0.000064798194,0.00006905156,0.00007801945,0.00013791735],"domain_scores_gemma":[0.9992029,0.00029055547,0.00017349428,0.00008360746,0.000051512794,0.00019794349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043979113,0.0016230698,0.0008352431,0.001204848,0.00061642757,0.00046649552,0.0007116324,0.0012998218,0.006213541],"category_scores_gemma":[0.0008984062,0.00035683878,0.0004674949,0.00043822455,0.0017218326,0.00034693955,0.0007187195,0.0016582744,0.00068361673],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006001411,0.0018876697,0.03228139,0.00045176665,0.0002046561,0.26010674,0.0003063378,0.00066149596,0.67407703,0.004653114,0.0029989274,0.016369494],"study_design_scores_gemma":[0.0008856083,0.0034706679,0.16979398,0.00016963831,0.00042212816,0.6691228,0.00039768504,0.002524524,0.14117093,0.0022627031,0.00971386,0.00006542967],"about_ca_topic_score_codex":0.0008111657,"about_ca_topic_score_gemma":0.00060483796,"teacher_disagreement_score":0.006213541,"about_ca_system_score_codex":0.00048101516,"about_ca_system_score_gemma":0.00067391683,"threshold_uncertainty_score":0.020786405},"labels":[],"label_agreement":null},{"id":"W1977929504","doi":"10.1002/1521-4141(200209)32:9<2653::aid-immu2653>3.0.co;2-v","title":"Massive inflammatory syndrome and lymphocytic immunodeficiency in KARAP/DAP12-transgenic mice","year":2002,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Centre National de la Recherche Scientifique; Ligue Contre le Cancer; Institut National de la Santé et de la Recherche Médicale","keywords":"Biology; Transgene; Inflammation; Genetically modified mouse; Myeloid; Immunology; Cancer research; Cell biology; Gene; Genetics","score_opus":0.009157798836904119,"score_gpt":0.1866222956436218,"score_spread":0.17746449680671766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977929504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884388,0.0012419033,0.0052031996,0.0002606718,0.000034512977,0.00011588685,0.0015161046,0.0007055088,0.002483437],"genre_scores_gemma":[0.9845138,0.0014818824,0.006128444,0.00015330683,0.000054387947,0.00015598592,0.00204805,0.00015886086,0.0053053857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954957,0.00007533433,0.00005799177,0.00012882685,0.00010087598,0.00008731004],"domain_scores_gemma":[0.99924004,0.00011405235,0.00031481648,0.000053128828,0.000030855943,0.0002470646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031990034,0.00150931,0.00044162534,0.0016077,0.00034942577,0.00048763698,0.00040626238,0.000911484,0.0027256955],"category_scores_gemma":[0.00030248705,0.0005014897,0.00033784367,0.00040686116,0.0007561666,0.00048421725,0.0005029167,0.0011907014,0.000790607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041074774,0.00014429902,0.00075508235,0.00006803461,0.000014959023,0.0018226212,0.00006869231,0.000110605615,0.9941022,0.0004648249,0.00011982642,0.0019181976],"study_design_scores_gemma":[0.0009771818,0.0035220995,0.051542472,0.0001296925,0.0002329408,0.049697686,0.00026470114,0.0047941725,0.8757077,0.0013736202,0.011670078,0.00008768883],"about_ca_topic_score_codex":0.00031143188,"about_ca_topic_score_gemma":0.0005082561,"teacher_disagreement_score":0.0027256955,"about_ca_system_score_codex":0.00035103143,"about_ca_system_score_gemma":0.000223176,"threshold_uncertainty_score":0.009118319},"labels":[],"label_agreement":null},{"id":"W1977957999","doi":"10.4161/onci.20696","title":"Trial Watch","year":2012,"lang":"en","type":"article","venue":"OncoImmunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":192,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; American Society of Clinical Oncology","keywords":"Innate immune system; Immune system; TLR2; Toll-like receptor; Pattern recognition receptor; TLR4; Immunology; Biology; Acquired immune system; TLR7; TLR3; Medicine; Cancer research","score_opus":0.016659581501656043,"score_gpt":0.25980436783370914,"score_spread":0.2431447863320531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1977957999","genre_codex":"other","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015557067,0.057156313,0.007940989,0.059342317,0.051544957,0.011556086,0.052495126,0.0046694106,0.73973775],"genre_scores_gemma":[0.05535868,0.026693452,0.006462035,0.099219345,0.022272076,0.011243686,0.04219841,0.0012084609,0.73534393],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994393,0.00017971333,0.000047852012,0.00011115162,0.00013322596,0.00008870277],"domain_scores_gemma":[0.9988298,0.00016073494,0.00016004388,0.00011782498,0.00018064144,0.00055102643],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010714618,0.000616834,0.0008726195,0.0004125487,0.00040829933,0.0018070894,0.00074792036,0.0025517922,0.30010194],"category_scores_gemma":[0.0025714124,0.0001583536,0.0009227321,0.00031628038,0.0002755664,0.0014098214,0.0008171261,0.0026517904,0.09003637],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0087095015,0.0003930323,0.00037346114,0.0022172087,0.00019626004,0.00011070972,0.000019480209,0.0001514594,0.0009936168,0.0037950044,0.6924459,0.29059443],"study_design_scores_gemma":[0.007821832,0.001220842,0.0009510072,0.0012103402,0.000089828776,0.00021777525,0.0000226573,0.00022320448,0.00040895873,0.004189747,0.9836255,0.000018445517],"about_ca_topic_score_codex":0.00044800565,"about_ca_topic_score_gemma":0.001201687,"teacher_disagreement_score":0.30010194,"about_ca_system_score_codex":0.0007613886,"about_ca_system_score_gemma":0.00089995307,"threshold_uncertainty_score":0.9983196},"labels":[],"label_agreement":null},{"id":"W1978077712","doi":"10.1089/oli.2006.16.58","title":"Stimulation of Innate Immune Responses by CpG Oligodeoxynucleotide in Newborn Lambs Can Reduce Bovine Herpesvirus-1 Shedding","year":2006,"lang":"en","type":"article","venue":"Oligonucleotides","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Canadian Food Inspection Agency","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Biology; Innate immune system; Stimulation; Immune system; Virology; Bovine herpesvirus 1; Immunology; Virus; Neuroscience; Herpesviridae; Viral disease","score_opus":0.007696114327948301,"score_gpt":0.23581003842862183,"score_spread":0.22811392410067352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978077712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989248,0.00058213517,0.00024361775,0.000021909334,0.000011431442,0.000010424222,0.000034826033,0.000013035858,0.00015773623],"genre_scores_gemma":[0.9964946,0.0006674747,0.00079160027,0.00006457924,0.000011281358,0.00004174371,0.00018162202,0.000006252979,0.0017407311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993217,0.000014617453,0.000006387409,0.000014491684,0.000014570675,0.000017763527],"domain_scores_gemma":[0.99989283,0.000020175119,0.000027074517,0.000006874223,0.00001219903,0.000040890227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012504254,0.00019333443,0.0002722678,0.00011311426,0.00006610961,0.00012644539,0.00012396302,0.00025363787,0.00069642044],"category_scores_gemma":[0.00020518289,0.00008933034,0.00012026933,0.000038194674,0.00016870938,0.000120306715,0.00012231074,0.00034497996,0.0002067313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004451612,0.000054501783,0.00033217657,0.000043893135,0.000002030862,0.000037056383,0.000028060707,0.000017328306,0.9973922,0.000007035712,0.000018126098,0.001622492],"study_design_scores_gemma":[0.00008911788,0.012133737,0.027579224,0.000045709923,0.000044009226,0.00056691736,0.0002200558,0.0009027094,0.9556889,0.00005192264,0.0026670212,0.000010651086],"about_ca_topic_score_codex":0.0007563096,"about_ca_topic_score_gemma":0.0012443317,"teacher_disagreement_score":0.0007563096,"about_ca_system_score_codex":0.00017122719,"about_ca_system_score_gemma":0.00012560718,"threshold_uncertainty_score":0.0023297668},"labels":[],"label_agreement":null},{"id":"W1978609533","doi":"10.1089/jir.2012.0004","title":"Treatment with Ligands for Toll-Like Receptors 2 and 5 Induces a Mixed T-helper 1- and 2-Like Response in Chicken Splenocytes","year":2012,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"TLR5; Flagellin; TLR2; Cytokine; Biology; Immune system; Toll-like receptor; Receptor; Cell biology; Downregulation and upregulation; Splenocyte; Acquired immune system; Immunology; Chemistry; Innate immune system; Gene; Genetics","score_opus":0.046346554493190965,"score_gpt":0.3314518555483095,"score_spread":0.28510530105511855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978609533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941637,0.0018310323,0.0015726831,0.000116696196,0.00009913838,0.000068291185,0.00036598195,0.000047710582,0.0017347492],"genre_scores_gemma":[0.9925167,0.00086505566,0.002394804,0.00026835976,0.00004868879,0.000112416026,0.0008139748,0.000019306613,0.0029606763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997576,0.000048559326,0.000027374677,0.00005756551,0.000040532384,0.00006833819],"domain_scores_gemma":[0.9998528,0.000043846765,0.000028397752,0.000018849736,0.000015037668,0.000041119813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022263172,0.00049346266,0.0003002088,0.00024423722,0.0001227586,0.00024769388,0.00013569057,0.00040167972,0.0011985798],"category_scores_gemma":[0.000114596965,0.00018696376,0.00029327496,0.00011108334,0.00017928609,0.00014353375,0.0001566809,0.0008381251,0.00049865874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027651855,0.00005133762,0.00016277343,0.000059151484,0.0000038185076,0.000036816014,0.000023855591,0.00003844229,0.9985648,0.000018669192,0.00003424934,0.0007296147],"study_design_scores_gemma":[0.00014937979,0.0037483391,0.016294695,0.000036729383,0.00003821718,0.00025843913,0.00014141969,0.00090004806,0.97519183,0.00006406475,0.00316377,0.000013101998],"about_ca_topic_score_codex":0.00037304254,"about_ca_topic_score_gemma":0.001003817,"teacher_disagreement_score":0.0011985798,"about_ca_system_score_codex":0.0002013335,"about_ca_system_score_gemma":0.00016262937,"threshold_uncertainty_score":0.004009664},"labels":[],"label_agreement":null},{"id":"W1978637210","doi":"10.1096/fj.04-3569fje","title":"Early life immune challenge alters innate immune responses to lipopolysaccharide: implications for host defense as adults","year":2005,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Innate immune system; Immunology; Lipopolysaccharide; Tumor necrosis factor alpha; Corticosterone; Proinflammatory cytokine; Cytokine; Biology; Innate lymphoid cell; Glucocorticoid; Medicine; Internal medicine; Endocrinology; Inflammation; Hormone","score_opus":0.01849450788520213,"score_gpt":0.26887978624726405,"score_spread":0.2503852783620619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978637210","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978908,0.0010911997,0.00044348618,0.00007907157,0.000020724756,0.000006475288,0.000059134054,0.000012883298,0.00039633692],"genre_scores_gemma":[0.99680614,0.0011147182,0.0005986782,0.00007700985,0.00001885123,0.000018959025,0.00013290752,0.0000070016936,0.0012257468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999105,0.000022027856,0.000006526859,0.000019919062,0.000014361097,0.000026724187],"domain_scores_gemma":[0.9996673,0.000031132055,0.0001122361,0.000027161992,0.000027402217,0.00013476993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015086359,0.0003316158,0.00025541327,0.00014412911,0.00009464637,0.00027292816,0.00013698958,0.0002675563,0.0009789915],"category_scores_gemma":[0.0002377198,0.000075081414,0.00010312287,0.000061173894,0.00029361265,0.00028638844,0.00015469093,0.0005299205,0.00017545608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012258666,0.00018084222,0.0041753617,0.00005859196,0.000007952998,0.00036608978,0.00010182878,0.000038381633,0.9880661,0.00017896885,0.00005245507,0.0055474867],"study_design_scores_gemma":[0.00010479748,0.009209014,0.2776626,0.00006353149,0.00006931316,0.0022397062,0.00065665605,0.0006962848,0.7051261,0.0007458767,0.003387742,0.000038263468],"about_ca_topic_score_codex":0.000121202895,"about_ca_topic_score_gemma":0.0002533696,"teacher_disagreement_score":0.0009789915,"about_ca_system_score_codex":0.00017189822,"about_ca_system_score_gemma":0.00013868095,"threshold_uncertainty_score":0.0032750964},"labels":[],"label_agreement":null},{"id":"W1978843262","doi":"10.1074/jbc.m110.189126","title":"Delineation of the Role of Toll-like Receptor Signaling during Peritonitis by a Gradually Growing Pathogenic Escherichia coli","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TLR4; TRIF; Peritonitis; TLR2; Peritoneal cavity; Escherichia coli; Cytokine; Biology; Tumor necrosis factor alpha; Sepsis; Immunology; Receptor; Microbiology; Toll-like receptor; Innate immune system; Inflammation; Medicine; Internal medicine; Immune system; Biochemistry; Gene","score_opus":0.011633473562364717,"score_gpt":0.19732992352240375,"score_spread":0.18569644996003903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978843262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950596,0.0016144202,0.0024980984,0.000098010525,0.000017798253,0.000025435613,0.0001535852,0.00006364828,0.0004694773],"genre_scores_gemma":[0.9950858,0.0010657257,0.002646132,0.00008586162,0.00001778832,0.000043082833,0.00018894809,0.0000127032245,0.0008539603],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985385,0.00003498124,0.000016309978,0.000024246538,0.000021703678,0.000048921793],"domain_scores_gemma":[0.999782,0.000021477077,0.00008234089,0.00001687119,0.000018058849,0.00007912916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026842984,0.00046265448,0.00029958977,0.0003107841,0.00011898307,0.00034502766,0.00021113898,0.0005236556,0.00052546413],"category_scores_gemma":[0.00015230349,0.00021808897,0.0002905398,0.000091664726,0.00034118784,0.00046766203,0.00030875727,0.0007304908,0.00018875138],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039786933,0.000020470488,0.00038777394,0.000032670974,0.0000021180329,0.00010092951,0.00001779525,0.00004387133,0.99825424,0.00009988387,0.000010062642,0.00063232513],"study_design_scores_gemma":[0.00005642068,0.0015898832,0.02792559,0.000031092233,0.000043144904,0.001195753,0.00015926399,0.0017228477,0.9657438,0.00031535534,0.0012009026,0.000015932103],"about_ca_topic_score_codex":0.000101947524,"about_ca_topic_score_gemma":0.00017677734,"teacher_disagreement_score":0.00052546413,"about_ca_system_score_codex":0.0002417075,"about_ca_system_score_gemma":0.00016091793,"threshold_uncertainty_score":0.0017578602},"labels":[],"label_agreement":null},{"id":"W1978971529","doi":"10.1007/s00134-004-2429-8","title":"Immune monitoring of patients with septic shock by measurement of intraleukocyte cytokines","year":2004,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Hospital","funders":"","keywords":"Septic shock; Cytokine; Medicine; Immunology; Lipopolysaccharide; Immune system; Sepsis; Tumor necrosis factor alpha; Intracellular; Monocyte; Whole blood; Biology; Cell biology","score_opus":0.01029631250350907,"score_gpt":0.22578270402737946,"score_spread":0.2154863915238704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1978971529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969805,0.001228928,0.0008419474,0.00015320898,0.00003197463,0.000026898848,0.00007248228,0.000021524516,0.00064251333],"genre_scores_gemma":[0.9984376,0.00042446153,0.0006023051,0.00016214771,0.00005493409,0.000035873236,0.00010072062,0.000004026762,0.00017777154],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971074,0.00009257916,0.00004143912,0.00004252787,0.000060550447,0.000052116673],"domain_scores_gemma":[0.99917585,0.00027759036,0.00018676139,0.000038288126,0.0001040412,0.00021746922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041192287,0.00061546016,0.0011090904,0.0005419806,0.0004247038,0.00059343857,0.00018972755,0.0005927913,0.00044415466],"category_scores_gemma":[0.0018960374,0.00019479828,0.00024376495,0.00034007902,0.00032297056,0.000498528,0.0002595024,0.00095890195,0.00017534653],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01003716,0.000472697,0.920268,0.00015445722,0.000119827,0.0044104247,0.00067218335,0.0006039614,0.027905036,0.00011387309,0.0006889179,0.03455356],"study_design_scores_gemma":[0.00042378492,0.011857236,0.95096666,0.00011740898,0.00026804177,0.011010878,0.0009977551,0.0050837216,0.017043786,0.00041956568,0.0017575693,0.000053621447],"about_ca_topic_score_codex":0.0003024101,"about_ca_topic_score_gemma":0.00028081084,"teacher_disagreement_score":0.0011090904,"about_ca_system_score_codex":0.00022415677,"about_ca_system_score_gemma":0.00027529223,"threshold_uncertainty_score":0.0021784902},"labels":[],"label_agreement":null},{"id":"W1979167640","doi":"10.1007/s11908-012-0273-5","title":"Toll-Like Receptors and Opportunities for New Sepsis Therapeutics","year":2012,"lang":"en","type":"article","venue":"Current Infectious Disease Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Sepsis; TLR9; Innate immune system; Receptor; Medicine; Immunology; Toll-like receptor; Toll; Immune system; Intensive care medicine; Bioinformatics; Biology; Internal medicine; Gene","score_opus":0.05700240280789874,"score_gpt":0.29662291233418536,"score_spread":0.2396205095262866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979167640","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02947064,0.8859982,0.010560361,0.049873017,0.005156724,0.000115580944,0.0003945221,0.00027673144,0.01815418],"genre_scores_gemma":[0.1698194,0.76433104,0.017666623,0.019199207,0.013344561,0.0003729052,0.00071524875,0.00006837084,0.01448255],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995939,0.00013302156,0.000045991503,0.000045071076,0.00008239663,0.000099665616],"domain_scores_gemma":[0.9993206,0.00031806406,0.00008361691,0.000041595267,0.00009938536,0.00013673754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002541463,0.000715853,0.0013545958,0.000897011,0.00037831874,0.002126192,0.00081483356,0.0018882755,0.010217822],"category_scores_gemma":[0.0010843968,0.00032771297,0.000766227,0.00044296525,0.0017670383,0.004171209,0.0010913288,0.0041589937,0.0019759783],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071154423,0.0018974014,0.0020214345,0.004209979,0.00027014088,0.0014848713,0.00044124507,0.0025113337,0.073168494,0.07818806,0.049397267,0.77929425],"study_design_scores_gemma":[0.0031164712,0.010569443,0.0057741934,0.002246693,0.00052060373,0.003543988,0.0010899499,0.0036782953,0.025726574,0.088308156,0.85519964,0.00022605673],"about_ca_topic_score_codex":0.00013189588,"about_ca_topic_score_gemma":0.00039456433,"teacher_disagreement_score":0.010217822,"about_ca_system_score_codex":0.0006154349,"about_ca_system_score_gemma":0.00090128963,"threshold_uncertainty_score":0.034182012},"labels":[],"label_agreement":null},{"id":"W1979322793","doi":"10.1074/jbc.m608089200","title":"Nucleic Acids Exert a Sequence-independent Cooperative Effect on Sequence-dependent Activation of Toll-like Receptor 9","year":2007,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Saskatchewan","funders":"Krembil Foundation","keywords":"Nucleic acid; Sequence (biology); Toll; Toll-like receptor; Receptor; Computational biology; Chemistry; Toll-Like Receptor 9; Biology; Biochemistry; Genetics; Innate immune system; Gene","score_opus":0.02469121261727462,"score_gpt":0.27877794307931875,"score_spread":0.2540867304620441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979322793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98677295,0.0032695723,0.0049372693,0.00012931952,0.00007920462,0.00005985056,0.00011664141,0.000112925256,0.0045223036],"genre_scores_gemma":[0.9956927,0.0006698838,0.0019920222,0.000071218405,0.000018810446,0.00003377647,0.00010833154,0.000011433784,0.0014018815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996642,0.0001125482,0.000024589384,0.000053340333,0.000081039296,0.00006435152],"domain_scores_gemma":[0.99965906,0.000097755845,0.000095589734,0.000033613447,0.00004136035,0.000072653034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022823125,0.00043432278,0.00022840344,0.00022480292,0.00017545774,0.00021043996,0.00019427075,0.00029596698,0.0021960542],"category_scores_gemma":[0.00047513208,0.00018052082,0.00035562384,0.00007930326,0.00023210321,0.0002109261,0.00046899126,0.00030045907,0.0009251129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006734736,0.000014459913,0.000051798695,0.000038082304,0.0000030279057,0.00004090258,0.000006552332,0.000049927654,0.9990491,0.00006512527,0.000012142618,0.0006016432],"study_design_scores_gemma":[0.000018520945,0.00032814482,0.0018354817,0.000010506193,0.000010470644,0.00021676684,0.00001354489,0.0006737986,0.99539125,0.00008461998,0.0014114236,0.0000054929183],"about_ca_topic_score_codex":0.00012972296,"about_ca_topic_score_gemma":0.00022124188,"teacher_disagreement_score":0.0021960542,"about_ca_system_score_codex":0.00016547139,"about_ca_system_score_gemma":0.00018764421,"threshold_uncertainty_score":0.007346511},"labels":[],"label_agreement":null},{"id":"W1979582699","doi":"10.1371/journal.ppat.1000829","title":"An Accessory to the ‘Trinity’: SR-As Are Essential Pathogen Sensors of Extracellular dsRNA, Mediating Entry and Leading to Subsequent Type I IFN Responses","year":2010,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Public Health Service; National Institutes of Health; McMaster University","keywords":"TLR3; Extracellular; RNA silencing; Biology; Cell biology; Receptor; Interferon; Innate immune system; Signal transduction; RNA interference; RNA; Toll-like receptor; Biochemistry; Immunology; Gene","score_opus":0.01812008334833694,"score_gpt":0.2699554674596676,"score_spread":0.25183538411133066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979582699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.981386,0.003103828,0.011004294,0.0002527437,0.000117333235,0.000078421435,0.0005928145,0.000304133,0.0031603796],"genre_scores_gemma":[0.97443557,0.00087294076,0.01395274,0.00017238273,0.00003966433,0.00005734898,0.0012999164,0.00005864809,0.009110955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981636,0.000040238196,0.000018954755,0.0000457305,0.000045769244,0.000033008815],"domain_scores_gemma":[0.9998265,0.000019385623,0.00006983261,0.000016483586,0.000023902097,0.000043840682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001966218,0.00042013687,0.00026042198,0.00016045291,0.00016416871,0.0002760426,0.000217856,0.0003006797,0.0024392202],"category_scores_gemma":[0.0001507592,0.00012348262,0.00029042654,0.000113902766,0.00022453324,0.00023337983,0.00025133052,0.0004907266,0.0010838804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007473122,0.00000666705,0.00015583719,0.000036455942,0.0000022561817,0.000056732926,0.0000054582133,0.000019966554,0.9985973,0.000088392786,0.00003444217,0.0009217357],"study_design_scores_gemma":[0.000021041653,0.0005077358,0.004717093,0.000009831522,0.00002511015,0.0016159225,0.000030255133,0.0009029462,0.9832318,0.00012263969,0.008805381,0.000010289463],"about_ca_topic_score_codex":0.0003511099,"about_ca_topic_score_gemma":0.0004997181,"teacher_disagreement_score":0.0024392202,"about_ca_system_score_codex":0.0002517783,"about_ca_system_score_gemma":0.00023384938,"threshold_uncertainty_score":0.008160055},"labels":[],"label_agreement":null},{"id":"W1979778191","doi":"10.1007/pl00000278","title":"A comparative study of the antipyretic effects of indomethacin and dipyrone in rats","year":2002,"lang":"en","type":"article","venue":"Inflammation Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Fleurimont; Université de Sherbrooke","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Antipyretic; Vasopressin; Indometacin; Cyclooxygenase; Chemistry; Antagonist; Endocrinology; Internal medicine; Pharmacology; Receptor; Medicine; Analgesic; Biochemistry; Enzyme","score_opus":0.05419166348049836,"score_gpt":0.33919811728212107,"score_spread":0.2850064538016227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1979778191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962921,0.0019082688,0.00034178284,0.00010207415,0.00007325027,0.00003484074,0.0003173885,0.000038687223,0.00089163677],"genre_scores_gemma":[0.9903336,0.0033770448,0.000765023,0.0000929058,0.00009942512,0.00006536722,0.0004934105,0.000019408388,0.0047538565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970657,0.000031196763,0.000016213371,0.00005108728,0.000039539584,0.00015534947],"domain_scores_gemma":[0.9992255,0.00011906108,0.00016003645,0.000104764265,0.00009604618,0.00029461805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035234372,0.0011655205,0.0011373401,0.0016667243,0.000605524,0.0003832048,0.0006200449,0.00077839784,0.0021558572],"category_scores_gemma":[0.00046585183,0.0005336974,0.00078166765,0.0007170721,0.0013457662,0.0012377676,0.00026495886,0.0012778814,0.00048803643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05125123,0.0031991347,0.0025144683,0.0004042803,0.00008896359,0.0009271032,0.00026780364,0.00024317825,0.92645335,0.0004557193,0.00023106646,0.013963727],"study_design_scores_gemma":[0.00080004125,0.058579825,0.03475916,0.00004265074,0.0004658804,0.00087800244,0.0006206768,0.00067020406,0.8995969,0.00035487194,0.0031483884,0.00008342395],"about_ca_topic_score_codex":0.0022786625,"about_ca_topic_score_gemma":0.0026217552,"teacher_disagreement_score":0.0022786625,"about_ca_system_score_codex":0.00050238246,"about_ca_system_score_gemma":0.0008196864,"threshold_uncertainty_score":0.0072121024},"labels":[],"label_agreement":null},{"id":"W1980603020","doi":"10.1067/msy.2000.103497","title":"Polymorphonuclear neutrophil (PMN) recruitment in a 2-front murine injury model: Triage of PMNs to competing stimuli of recruitment","year":2000,"lang":"en","type":"article","venue":"Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Hemocytometer; Peritonitis; Laparotomy; Abdomen; Sepsis; Surgery; Anesthesia; Pathology","score_opus":0.07427690008283167,"score_gpt":0.3013281894519639,"score_spread":0.22705128936913221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1980603020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99106556,0.0014965062,0.00420576,0.00030865837,0.00021399296,0.00046335597,0.00033087062,0.0000873695,0.0018279036],"genre_scores_gemma":[0.9813014,0.0011746538,0.0088800285,0.00047717834,0.00018905987,0.00062971923,0.00046314613,0.000028229473,0.00685659],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992061,0.000114497154,0.000041479154,0.00013037148,0.00022399717,0.0002835121],"domain_scores_gemma":[0.99953413,0.000053296375,0.00010028193,0.00006273263,0.000029603872,0.00021995755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008771201,0.0017530058,0.0010566988,0.0012565558,0.0009807484,0.0009868409,0.0006468096,0.0023320643,0.0034851993],"category_scores_gemma":[0.00035206368,0.00059089763,0.0012123262,0.00036173678,0.00088322384,0.001368351,0.0006973389,0.0029720555,0.0009911489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010716182,0.0020963845,0.00073239143,0.0001590254,0.000016162097,0.0006548016,0.00012679033,0.00028198422,0.9807733,0.0005647753,0.00029035582,0.0035878697],"study_design_scores_gemma":[0.0006959996,0.020895438,0.012654358,0.00007588282,0.000107473796,0.0016013593,0.00026352573,0.0043581366,0.9560651,0.000575726,0.0026536942,0.000053236072],"about_ca_topic_score_codex":0.0006409834,"about_ca_topic_score_gemma":0.0016238588,"teacher_disagreement_score":0.0034851993,"about_ca_system_score_codex":0.0008136232,"about_ca_system_score_gemma":0.00075650454,"threshold_uncertainty_score":0.011659145},"labels":[],"label_agreement":null},{"id":"W1981304364","doi":"10.1016/j.vaccine.2014.01.082","title":"The effects of administration of ligands for Toll-like receptor 4 and 21 against Marek's disease in chickens","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre; University of Calgary; University of Guelph","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Marek's disease; TLR9; CpG Oligodeoxynucleotide; TLR3; Biology; TLR4; Toll-like receptor; Virology; Innate immune system; Immune system; Virus; Immunology; CpG site; TLR7; Lipopolysaccharide; Immunity; Receptor; Gene; Gene expression; Genetics","score_opus":0.00296998786022053,"score_gpt":0.21072036640065142,"score_spread":0.20775037854043088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981304364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99881196,0.00045495975,0.00007714164,0.00008958544,0.00008753823,0.000022835038,0.00008119105,0.000011606441,0.00036311804],"genre_scores_gemma":[0.99695694,0.00045193385,0.00023105604,0.000085500695,0.000061930674,0.00003484315,0.00021626096,0.000007663402,0.001953879],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996087,0.00011811415,0.00003211755,0.00005970939,0.000029561843,0.00015172637],"domain_scores_gemma":[0.9993362,0.00026732602,0.00009334862,0.000056328026,0.000059436577,0.00018725276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051533664,0.00065840967,0.0006588733,0.00038535835,0.00035546487,0.00045473772,0.00038323773,0.0010059644,0.0012202268],"category_scores_gemma":[0.00064486824,0.0003611288,0.0005147539,0.00012594492,0.00090347347,0.0006867756,0.00018016057,0.0014931117,0.00029450527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.07672447,0.0056093265,0.001316674,0.00026740317,0.000091978065,0.00029551671,0.00029980336,0.0007613634,0.90482,0.00025703158,0.00041830944,0.009138104],"study_design_scores_gemma":[0.0033010193,0.13144891,0.016993184,0.000046411686,0.00033947694,0.0002961098,0.0004136857,0.0017918497,0.8424278,0.00022234715,0.0026587762,0.00006045627],"about_ca_topic_score_codex":0.0023990087,"about_ca_topic_score_gemma":0.0032260627,"teacher_disagreement_score":0.0023990087,"about_ca_system_score_codex":0.0005802753,"about_ca_system_score_gemma":0.000662717,"threshold_uncertainty_score":0.0047701},"labels":[],"label_agreement":null},{"id":"W1981412223","doi":"10.1152/ajpregu.00756.2002","title":"Interleukin-10 and nerve growth factor have reciprocal upregulatory effects on intestinal epithelial cells","year":2003,"lang":"en","type":"article","venue":"American Journal of Physiology-Regulatory, Integrative and Comparative Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cholera toxin; Downregulation and upregulation; Epithelium; Nerve growth factor; Intestinal epithelium; Biology; Cytokine; Flow cytometry; Intestinal mucosa; Cell biology; Cell culture; Endocrinology; Internal medicine; Molecular biology; Immunology; Medicine; Receptor; Biochemistry","score_opus":0.012970216230882693,"score_gpt":0.2506819981756975,"score_spread":0.2377117819448148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981412223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97850055,0.01508472,0.0018329227,0.0002280251,0.00009016217,0.000031564832,0.00011588804,0.00003721751,0.004078874],"genre_scores_gemma":[0.9899183,0.0050796797,0.0023062814,0.000151191,0.000074193355,0.000053437736,0.00012345015,0.0000076537235,0.0022858055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994962,0.00016946669,0.00003709909,0.000055280278,0.000111249465,0.00013063502],"domain_scores_gemma":[0.9995859,0.00012884136,0.000077695106,0.00004739547,0.00006485839,0.000095367854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026392462,0.00033489135,0.00031277322,0.00023648166,0.00012274362,0.0004130961,0.00012894858,0.00027486528,0.0012823531],"category_scores_gemma":[0.00033092668,0.00016876408,0.00025063512,0.00015788546,0.00029355916,0.0002927509,0.00034061,0.0004906216,0.0003239222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046658714,0.000041688985,0.0013956786,0.00015832434,0.000010216685,0.0002392807,0.000050820163,0.000048778285,0.99180096,0.00010617195,0.000039352133,0.005642204],"study_design_scores_gemma":[0.000112805894,0.002878367,0.09345361,0.000064823034,0.00011864299,0.0016093822,0.000671836,0.00089531887,0.89307064,0.00038035918,0.006720353,0.000023893866],"about_ca_topic_score_codex":0.00021313898,"about_ca_topic_score_gemma":0.00062326295,"teacher_disagreement_score":0.0012823531,"about_ca_system_score_codex":0.00021231954,"about_ca_system_score_gemma":0.00019302829,"threshold_uncertainty_score":0.004289925},"labels":[],"label_agreement":null},{"id":"W1981498390","doi":"10.1371/journal.pone.0004127","title":"Toll-Like Receptor 3 Signaling on Macrophages Is Required for Survival Following Coxsackievirus B4 Infection","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Michael Smith Health Research BC","keywords":"TLR3; Coxsackievirus; Biology; Innate immune system; Viral replication; Toll-like receptor; TLR7; Signal transduction; Immune system; Acquired immune system; Immunology; miR-155; Cell biology; Virology; Virus; Enterovirus; microRNA; Gene; Genetics","score_opus":0.04439063003925943,"score_gpt":0.2600682467159395,"score_spread":0.21567761667668006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981498390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993741,0.0021767109,0.0016156047,0.000242923,0.000054300453,0.00003387966,0.00043137203,0.00011486321,0.0015894084],"genre_scores_gemma":[0.9959925,0.0006321208,0.0009369549,0.00009879201,0.000017086935,0.000051965828,0.00046135587,0.000019658559,0.0017896327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996989,0.000047155954,0.000026449341,0.000028320363,0.00005984276,0.00013938536],"domain_scores_gemma":[0.99970645,0.000027997094,0.00008837508,0.000037911544,0.000044416684,0.0000947265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003255851,0.00034285305,0.00031942918,0.00027233604,0.0003243032,0.00042160726,0.00019821426,0.000423155,0.0014942567],"category_scores_gemma":[0.00024741516,0.00016805207,0.00035846193,0.0001266247,0.00031870004,0.00031587417,0.0004519355,0.000767594,0.0009258038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053553405,0.000035478442,0.00080537907,0.000046015786,0.0000046584964,0.00020042385,0.000027831682,0.00003230906,0.9968641,0.00009627848,0.000092633476,0.0012593954],"study_design_scores_gemma":[0.0001348977,0.0007073636,0.06311929,0.000052057905,0.000041646126,0.0014347417,0.00034363035,0.001375623,0.92638093,0.00055041007,0.0058384608,0.000020938032],"about_ca_topic_score_codex":0.00050765206,"about_ca_topic_score_gemma":0.00057223125,"teacher_disagreement_score":0.0014942567,"about_ca_system_score_codex":0.00037800136,"about_ca_system_score_gemma":0.0004272128,"threshold_uncertainty_score":0.004998803},"labels":[],"label_agreement":null},{"id":"W1981520342","doi":"10.1016/j.molmed.2014.01.006","title":"Gene expression profiling in sepsis: timing, tissue, and translational considerations","year":2014,"lang":"en","type":"review","venue":"Trends in Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute","keywords":"Sepsis; Gene expression profiling; Gene; Gene expression; Biology; Computational biology; Microarray; Bioinformatics; Medicine; Immunology; Genetics","score_opus":0.04213960675103004,"score_gpt":0.35358469453404445,"score_spread":0.3114450877830144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981520342","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009400279,0.9983346,0.00043611668,0.0005590197,0.0002655551,0.0000025769427,0.000019254972,0.0000078863695,0.0002810157],"genre_scores_gemma":[0.0007220139,0.997526,0.000556441,0.00043615472,0.00042006336,0.0000069751018,0.000029595609,0.0000027677515,0.00029992586],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993622,0.00012404176,0.00008118289,0.00015184528,0.00023398257,0.000046823967],"domain_scores_gemma":[0.9978777,0.0011643168,0.00021526894,0.00007126566,0.0005501359,0.00012126363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026798677,0.0010973874,0.002681752,0.0018184633,0.00027365514,0.0019982755,0.00159057,0.0018847864,0.0017039573],"category_scores_gemma":[0.0024310702,0.00044134358,0.0006279001,0.0025950316,0.0015270466,0.0019022377,0.0010531368,0.0032275273,0.0014950514],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018398778,0.00007470535,0.0006571595,0.009062118,0.00011337211,0.00019297536,0.00006192216,0.0004419928,0.004747993,0.004943522,0.023072243,0.95644796],"study_design_scores_gemma":[0.000047179183,0.00026634376,0.0044057546,0.006155668,0.0003366101,0.0024948672,0.00021944345,0.00057933707,0.0037908982,0.009585368,0.97201735,0.00010113106],"about_ca_topic_score_codex":0.00093368115,"about_ca_topic_score_gemma":0.0019977859,"teacher_disagreement_score":0.002681752,"about_ca_system_score_codex":0.0009172274,"about_ca_system_score_gemma":0.001717813,"threshold_uncertainty_score":0.014172673},"labels":[],"label_agreement":null},{"id":"W1981555245","doi":"10.1371/journal.pone.0053936","title":"Glucocorticoid Repression of Inflammatory Gene Expression Shows Differential Responsiveness by Transactivation- and Transrepression-Dependent Mechanisms","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"GlaxoSmithKline; AstraZeneca; Canadian Institutes of Health Research; Alberta Innovates; Bristol-Myers Squibb","keywords":"Psychological repression; Transrepression; Cycloheximide; Transactivation; Glucocorticoid receptor; Biology; Glucocorticoid; Molecular biology; Gene expression; Cell biology; Protein biosynthesis; Gene; Endocrinology; Biochemistry","score_opus":0.012049941619393312,"score_gpt":0.19236054972542072,"score_spread":0.1803106081060274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981555245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97470564,0.016106239,0.0042922082,0.00016143863,0.00006706474,0.000048841328,0.000724083,0.00011020302,0.0037843224],"genre_scores_gemma":[0.9876743,0.0048209336,0.0025488709,0.00009781943,0.0000382008,0.000061942665,0.0012340934,0.000028759185,0.0034951027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959594,0.000054018747,0.000039070957,0.00008850287,0.00012695453,0.00009556519],"domain_scores_gemma":[0.9997372,0.000055351433,0.000068724934,0.000049171318,0.000049870076,0.000039699113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021561632,0.000427189,0.00039887513,0.00033743886,0.00017621995,0.0005546525,0.00020039237,0.00022292335,0.0014671023],"category_scores_gemma":[0.0002067816,0.0001998221,0.0005599052,0.0003112965,0.0003361007,0.00019739948,0.00021746647,0.00053662946,0.0005596813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006579778,0.0000063478824,0.00025821207,0.000029860754,0.00000396362,0.000026753863,0.000016080749,0.000013742098,0.99867994,0.00004492186,0.000008606723,0.000845805],"study_design_scores_gemma":[0.000009228092,0.0002540391,0.03350217,0.000013798918,0.000025462792,0.00044264222,0.00007583915,0.00023698568,0.9631533,0.00005294607,0.0022224784,0.000011074533],"about_ca_topic_score_codex":0.0008094226,"about_ca_topic_score_gemma":0.0013305582,"teacher_disagreement_score":0.0014671023,"about_ca_system_score_codex":0.00038338517,"about_ca_system_score_gemma":0.00032153862,"threshold_uncertainty_score":0.0049079657},"labels":[],"label_agreement":null},{"id":"W1981556023","doi":"10.2460/ajvr.67.11.1901","title":"Evaluation of the effects of short-chain fatty acids and extracellular pH on bovine neutrophil function in vitro","year":2006,"lang":"en","type":"article","venue":"American Journal of Veterinary Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Social Sciences and Humanities Research Council; University of Calgary","funders":"","keywords":"In vitro; Function (biology); Extracellular; Chemistry; Neutrophil extracellular traps; Biochemistry; Chain (unit); Biology; Immunology; Cell biology; Inflammation; Physics","score_opus":0.039034904275219266,"score_gpt":0.32821236061628545,"score_spread":0.2891774563410662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981556023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873662,0.010037286,0.0010655355,0.0000904516,0.000029948686,0.00004279274,0.000331011,0.000009864149,0.0010269381],"genre_scores_gemma":[0.99462944,0.0025683085,0.0014070902,0.00010341334,0.000018972803,0.000034334873,0.00056381995,0.000004941367,0.00066979165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928385,0.00028242526,0.00006520869,0.00008473631,0.00015212805,0.00013173472],"domain_scores_gemma":[0.99967813,0.00009729833,0.00007244091,0.000029403513,0.00006817432,0.000054546115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000719571,0.0004481039,0.00049913925,0.000121496465,0.00013736695,0.00033862915,0.00026233235,0.00041563797,0.0006946417],"category_scores_gemma":[0.00046323967,0.00013223905,0.00023918645,0.00013038816,0.00018880519,0.00026726845,0.00029283966,0.00030142194,0.00028959042],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001452867,0.00012390458,0.0017696355,0.00016680785,0.00001568548,0.00006673132,0.0000408034,0.00012541404,0.9930033,0.000015964553,0.00003075837,0.0031881428],"study_design_scores_gemma":[0.0000808446,0.0078464765,0.051433884,0.00006316698,0.000087385255,0.0004487759,0.00016512204,0.0015808087,0.93515337,0.000038533446,0.0030841623,0.000017440854],"about_ca_topic_score_codex":0.0014827162,"about_ca_topic_score_gemma":0.0023616708,"teacher_disagreement_score":0.0014827162,"about_ca_system_score_codex":0.00028550025,"about_ca_system_score_gemma":0.0002191161,"threshold_uncertainty_score":0.0038055182},"labels":[],"label_agreement":null},{"id":"W1981562068","doi":"10.1016/j.dci.2010.08.001","title":"Synthetic double-stranded RNA oligonucleotides are immunostimulatory for chicken spleen cells","year":2010,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Research and Innovation; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Poultry Industry Council","keywords":"TLR3; Biology; TLR7; RNA silencing; Interferon; Splenocyte; Innate immune system; Oligonucleotide; RNA; Dicer; Molecular biology; Cell biology; Immune system; Toll-like receptor; MDA5; Messenger RNA; Gene expression; RNA interference; Virology; Gene; Immunology; Biochemistry","score_opus":0.025653362263695755,"score_gpt":0.2687780716986178,"score_spread":0.24312470943492204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981562068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936924,0.0014864012,0.0017953349,0.00009712779,0.000096310665,0.000034811157,0.00012318368,0.00005814758,0.002616207],"genre_scores_gemma":[0.99422604,0.0007342174,0.0023668744,0.00012924074,0.000053395815,0.000039178634,0.00029509957,0.000021604743,0.0021342933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997831,0.000046633217,0.000014327546,0.000051214123,0.000041240495,0.00006349736],"domain_scores_gemma":[0.9997003,0.00011391136,0.00006621814,0.000018998413,0.000028389035,0.000072211864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023164468,0.00045250973,0.00020430208,0.0003200367,0.00016081547,0.00028310387,0.00018072317,0.00048566874,0.0022142532],"category_scores_gemma":[0.00021811768,0.00022285766,0.00024458818,0.00011171635,0.0003014935,0.00013041701,0.000160398,0.0004315764,0.00039089218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012803686,0.000012010591,0.000053761247,0.000025006071,0.0000020402715,0.000020230922,0.000006009395,0.000044894707,0.99905807,0.000038763563,0.00001289372,0.0005983122],"study_design_scores_gemma":[0.00004915103,0.00090278,0.0021409688,0.000008977491,0.000020379695,0.00008559471,0.000032898864,0.00037901025,0.99524164,0.000040583163,0.0010938754,0.0000041708186],"about_ca_topic_score_codex":0.00028236958,"about_ca_topic_score_gemma":0.0006241927,"teacher_disagreement_score":0.0022142532,"about_ca_system_score_codex":0.00023465298,"about_ca_system_score_gemma":0.00021063245,"threshold_uncertainty_score":0.007407427},"labels":[],"label_agreement":null},{"id":"W1981601846","doi":"10.1016/j.smim.2009.05.006","title":"The innate immune response to DNA","year":2009,"lang":"en","type":"review","venue":"Seminars in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"AIM2; Innate immune system; TLR9; Inflammasome; Biology; DNA; Toll-Like Receptor 9; Pattern recognition receptor; Immune system; Cell biology; Receptor; Immunology; Genetics; Gene; DNA methylation","score_opus":0.01393118216937973,"score_gpt":0.29112402849065033,"score_spread":0.2771928463212706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981601846","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000076934964,0.9957807,0.0003370245,0.0003766409,0.0017097377,0.0000053240315,0.000013604573,0.0000097264965,0.0016902675],"genre_scores_gemma":[0.0005575084,0.9949338,0.00026570048,0.00046954237,0.0012956805,0.000010562522,0.00003678163,0.000002632356,0.0024278087],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977785,0.00003317234,0.00002823988,0.000048092617,0.000085597436,0.000027065129],"domain_scores_gemma":[0.99971896,0.00011518132,0.0000398097,0.000016273987,0.00006653373,0.000043315926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006713136,0.0015006871,0.0018180194,0.0016191269,0.00041545834,0.0014008819,0.0012851212,0.0017315997,0.003926052],"category_scores_gemma":[0.0005832215,0.00043945425,0.00045863522,0.0017831121,0.0015916411,0.0022540092,0.0012958859,0.0032780515,0.005534991],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015320322,0.00006259687,0.000112829526,0.008211095,0.000048517748,0.0003173108,0.00005032784,0.00032972943,0.0068903756,0.006249642,0.078209236,0.8993651],"study_design_scores_gemma":[0.000013436305,0.000034529327,0.00023144773,0.00083109725,0.00002220431,0.0006491149,0.000028828083,0.000039814713,0.0006612595,0.002167691,0.99530965,0.000010870908],"about_ca_topic_score_codex":0.00056729646,"about_ca_topic_score_gemma":0.0010509909,"teacher_disagreement_score":0.003926052,"about_ca_system_score_codex":0.0008547218,"about_ca_system_score_gemma":0.0009120053,"threshold_uncertainty_score":0.0131338835},"labels":[],"label_agreement":null},{"id":"W1981730684","doi":"10.1159/000353694","title":"Leukotriene B&lt;sub&gt;4&lt;/sub&gt;, an Endogenous Stimulator of the Innate Immune Response against Pathogens","year":2013,"lang":"en","type":"review","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Innate immune system; Endogeny; Immune system; Immunology; Leukotriene; Biology; Chemistry; Microbiology; Biochemistry","score_opus":0.03951466421878151,"score_gpt":0.2760683833013318,"score_spread":0.2365537190825503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981730684","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027006926,0.9976235,0.00018754415,0.0002163265,0.0002672384,0.0000062903205,0.000029594945,0.000012461642,0.0013869642],"genre_scores_gemma":[0.00094518525,0.99728274,0.00025814358,0.00012245512,0.0001782262,0.000008157677,0.000052075644,0.0000019882057,0.0011509685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998882,0.000011677823,0.000018649633,0.000018748391,0.00004801158,0.000014733868],"domain_scores_gemma":[0.99984384,0.000041345826,0.000028159422,0.0000051645156,0.000054951426,0.00002661188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002899338,0.0007155096,0.0010756565,0.0017927575,0.00025209153,0.00078868144,0.00056629465,0.0007646522,0.0043413267],"category_scores_gemma":[0.0003805348,0.00019675793,0.0003372589,0.0016718212,0.0002755346,0.00086375227,0.00053019385,0.0011732749,0.0038259027],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065551525,0.000077633216,0.00021266339,0.010420056,0.000051691743,0.00025039766,0.000038223832,0.00016731252,0.005515361,0.0016859968,0.02257089,0.9589442],"study_design_scores_gemma":[0.000010636173,0.000081500184,0.0010391442,0.0013280164,0.00006678109,0.0018306014,0.000044713517,0.000047887504,0.0013671609,0.0007637022,0.9934047,0.000015205843],"about_ca_topic_score_codex":0.00070067134,"about_ca_topic_score_gemma":0.0012168104,"teacher_disagreement_score":0.0043413267,"about_ca_system_score_codex":0.00040872893,"about_ca_system_score_gemma":0.0008269567,"threshold_uncertainty_score":0.014523208},"labels":[],"label_agreement":null},{"id":"W1981828720","doi":"10.1016/j.vetimm.2015.02.006","title":"In ovo delivery of toll-like receptor 2 ligand, lipoteichoic acid induces pro-inflammatory mediators reducing post-hatch infectious laryngotracheitis virus infection","year":2015,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Canadian Poultry Research Council; University of Calgary","keywords":"In ovo; Lipoteichoic acid; Biology; TLR2; Toll-like receptor; Immune system; Immunology; Innate immune system; Receptor; Embryo; Viral shedding; Virology; Peripheral blood mononuclear cell; Virus; Microbiology; Cell biology","score_opus":0.014343994631442971,"score_gpt":0.2428487200386709,"score_spread":0.2285047254072279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981828720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948835,0.0010581608,0.0018862498,0.00019523094,0.00025114857,0.000058811525,0.00036466637,0.000059821647,0.0012423263],"genre_scores_gemma":[0.9888081,0.0009960824,0.0020953235,0.0001654805,0.00006348366,0.000101702724,0.0005705795,0.000030421794,0.0071688667],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981457,0.000016865159,0.000014143485,0.000052253974,0.000030279683,0.00007184929],"domain_scores_gemma":[0.9997762,0.0000463391,0.00006943564,0.00002079891,0.000020569696,0.00006658978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017300338,0.00038379032,0.00036073808,0.00034543165,0.00025469685,0.000522415,0.00018897431,0.0005234468,0.0020482643],"category_scores_gemma":[0.00024940772,0.00020752265,0.00024300175,0.00010786919,0.0005453309,0.00044853063,0.00021375768,0.001308217,0.00036020952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014560346,0.00016716713,0.00020003929,0.00006358069,0.0000066243247,0.000089039655,0.000044339766,0.000039493774,0.9967102,0.00010184758,0.00007085089,0.0010508623],"study_design_scores_gemma":[0.00020984998,0.0049983785,0.0070736925,0.00002657671,0.00006749352,0.0002560516,0.00038116245,0.0007495327,0.98267347,0.00016912699,0.0033810674,0.000013650791],"about_ca_topic_score_codex":0.00054599665,"about_ca_topic_score_gemma":0.0011666546,"teacher_disagreement_score":0.0020482643,"about_ca_system_score_codex":0.00034555385,"about_ca_system_score_gemma":0.00036020455,"threshold_uncertainty_score":0.0068520904},"labels":[],"label_agreement":null},{"id":"W1981998280","doi":"10.1152/ajplung.00367.2002","title":"Role of IFN-γ and IL-2 in rat lung epithelial cell migration and apoptosis after oxidant injury","year":2004,"lang":"en","type":"article","venue":"American Journal of Physiology-Lung Cellular and Molecular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Apoptosis; Molecular biology; In vivo; Receptor; Biology; Programmed cell death; Biochemistry","score_opus":0.0015407022593814242,"score_gpt":0.18986232925846874,"score_spread":0.1883216269990873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981998280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98185295,0.012240221,0.0041479985,0.00016092153,0.00007401257,0.000053841024,0.00018564714,0.0000485508,0.0012358625],"genre_scores_gemma":[0.9927366,0.002875726,0.0023177743,0.00007706682,0.00002257519,0.00007248974,0.00020141149,0.0000053698714,0.0016910327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977106,0.00006278557,0.000025538407,0.000037795442,0.000041388736,0.000061548766],"domain_scores_gemma":[0.99991095,0.000007919739,0.000028878118,0.0000145635995,0.000013887808,0.000023740542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002960172,0.00054303574,0.000383998,0.00023397003,0.00016327543,0.00031757992,0.00019611046,0.00040122468,0.00074368616],"category_scores_gemma":[0.00011787569,0.00012748354,0.0004183151,0.00012533081,0.00023881912,0.0002654028,0.00025647576,0.0006236997,0.00024484342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011691827,0.00007909606,0.0013720366,0.00012362297,0.000018720217,0.00016648875,0.000050973085,0.00008998893,0.99177307,0.0001414808,0.000023386841,0.004992029],"study_design_scores_gemma":[0.000058805676,0.0015354721,0.017510884,0.0000356687,0.00007450029,0.00046767708,0.00016660089,0.00070200284,0.9768088,0.0001140677,0.0025185463,0.0000069441335],"about_ca_topic_score_codex":0.00037446545,"about_ca_topic_score_gemma":0.00058802107,"teacher_disagreement_score":0.00074368616,"about_ca_system_score_codex":0.00028309063,"about_ca_system_score_gemma":0.00026999504,"threshold_uncertainty_score":0.0024878979},"labels":[],"label_agreement":null},{"id":"W1982114976","doi":"10.1186/cc13912","title":"Polymyxin B hemoperfusion: a mechanistic perspective","year":2014,"lang":"en","type":"review","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Hemoperfusion; Medicine; Septic shock; Intensive care medicine; Renal replacement therapy; Polymyxin B; Dosing; Sepsis; Polymyxin; Pharmacology; Colistin; Internal medicine; Antibiotics; Biology; Microbiology; Hemodialysis","score_opus":0.03157539167608079,"score_gpt":0.36550848713557277,"score_spread":0.33393309545949196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982114976","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007490906,0.9991949,0.000059054397,0.00027372205,0.000108772,0.0000023924442,0.000005876301,0.0000022417544,0.0002781121],"genre_scores_gemma":[0.00041665806,0.9991278,0.00007736255,0.00012150114,0.00008857641,0.0000043505006,0.000007486107,4.1920245e-7,0.00015578962],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998652,0.000027992595,0.000021995307,0.000025836654,0.000042360007,0.000016589824],"domain_scores_gemma":[0.99976736,0.000115900715,0.00003561687,0.000006947792,0.000054360753,0.000019791585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057310046,0.0008716821,0.0014175551,0.0017933138,0.00023337871,0.0010412163,0.0009617831,0.0014400396,0.002312415],"category_scores_gemma":[0.00057193736,0.0002581575,0.00056805345,0.0016692836,0.000513129,0.00158233,0.0005582,0.0021103013,0.0010304914],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016445878,0.0001689019,0.00019278441,0.03947721,0.00014950597,0.00030140128,0.00009765964,0.00038847176,0.0034902925,0.0069506257,0.02432439,0.92429423],"study_design_scores_gemma":[0.000043962358,0.00024419703,0.0010379337,0.0075262897,0.00018589405,0.001659312,0.000094362615,0.00014687139,0.0008677825,0.0031350316,0.9850339,0.00002439846],"about_ca_topic_score_codex":0.00067237945,"about_ca_topic_score_gemma":0.0010629968,"teacher_disagreement_score":0.002312415,"about_ca_system_score_codex":0.0005555477,"about_ca_system_score_gemma":0.0010459044,"threshold_uncertainty_score":0.0077358484},"labels":[],"label_agreement":null},{"id":"W1982251171","doi":"10.1074/jbc.m508416200","title":"Human Serum from Patients with Septic Shock Activates Transcription Factors STAT1, IRF1, and NF-κB and Induces Apoptosis in Human Cardiac Myocytes","year":2005,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Laurentian University","funders":"","keywords":"Apoptosis; IRF1; Septic shock; NF-κB; Myocyte; STAT1; Cell biology; Transcription factor; Cardiac myocyte; Heat shock factor; NFKB1; Cancer research; Chemistry; Heat shock protein; Internal medicine; Biology; Sepsis; Hsp70; Medicine; Signal transduction; Gene; Biochemistry","score_opus":0.012782594432188377,"score_gpt":0.22338770424219992,"score_spread":0.21060510981001154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982251171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940327,0.0026906228,0.0018024923,0.00022187828,0.00004386502,0.000024273175,0.00032338782,0.000050022863,0.00081087055],"genre_scores_gemma":[0.9969856,0.00093959825,0.0007023601,0.00010305695,0.000021665866,0.00001696598,0.00075150124,0.000003969357,0.00047533587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998004,0.00006542908,0.000023964514,0.00002400532,0.0000529433,0.000033374108],"domain_scores_gemma":[0.9998393,0.000034673503,0.00005148356,0.000017826498,0.000029376268,0.000027373442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002783028,0.000390713,0.0003138336,0.0003228493,0.00014370398,0.0002933706,0.00008253226,0.00023111123,0.0016594115],"category_scores_gemma":[0.0005512441,0.000096368174,0.0001684096,0.0002699155,0.00018718172,0.0000890287,0.00022536972,0.00029196736,0.00044355934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00456654,0.00020331173,0.04559708,0.00026215464,0.00008312889,0.0017094795,0.00034165732,0.0001527884,0.92635524,0.00015990144,0.00084449415,0.019724293],"study_design_scores_gemma":[0.00045002575,0.0069117034,0.33164743,0.00012136625,0.00019610798,0.015574103,0.0008233511,0.0016785598,0.6328232,0.00064221234,0.009101223,0.000030634146],"about_ca_topic_score_codex":0.00028337148,"about_ca_topic_score_gemma":0.00026088842,"teacher_disagreement_score":0.0016594115,"about_ca_system_score_codex":0.0001671662,"about_ca_system_score_gemma":0.00021958584,"threshold_uncertainty_score":0.005551338},"labels":[],"label_agreement":null},{"id":"W1982328089","doi":"10.1016/j.cub.2004.04.033","title":"Recognition of Bacteria in the Cytosol of Mammalian Cells by the Ubiquitin System","year":2004,"lang":"en","type":"article","venue":"Current Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":306,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Biology; Cytosol; Intracellular; Bacteria; Salmonella; Vacuole; Microbiology; Intracellular parasite; Extracellular; Cell biology; Biochemistry; Genetics; Enzyme; Cytoplasm","score_opus":0.020429774454403516,"score_gpt":0.2516553199686441,"score_spread":0.23122554551424057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982328089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9444309,0.034833327,0.011524871,0.0016462534,0.00023802316,0.000022474595,0.00022015181,0.00012827327,0.006955847],"genre_scores_gemma":[0.9807375,0.008552113,0.0038310566,0.00032449185,0.000079847974,0.000010401865,0.00036316103,0.000015716838,0.0060856617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996984,0.00007939488,0.000020601941,0.00005963382,0.00007535834,0.000066700464],"domain_scores_gemma":[0.9998344,0.000022652124,0.0000427799,0.000018049104,0.00003645553,0.000045544264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049123,0.00037294102,0.00062846916,0.00024988066,0.00039742162,0.0010004343,0.00018594578,0.0005273892,0.0024143057],"category_scores_gemma":[0.00026311612,0.0001901789,0.0004318122,0.00014880016,0.00040722924,0.0010754659,0.00064110925,0.00058403896,0.001727453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005931121,0.000028418031,0.0013616267,0.00023703735,0.00002623763,0.00020285787,0.000089960995,0.00012106141,0.9848365,0.0021062524,0.0004202806,0.009976723],"study_design_scores_gemma":[0.00007978639,0.0005046398,0.0132358065,0.00008441472,0.00005575249,0.0016246253,0.000429589,0.003347717,0.95983034,0.0025466182,0.018218698,0.00004201866],"about_ca_topic_score_codex":0.00044934265,"about_ca_topic_score_gemma":0.0007833794,"teacher_disagreement_score":0.0024143057,"about_ca_system_score_codex":0.0007598824,"about_ca_system_score_gemma":0.00041295006,"threshold_uncertainty_score":0.008076668},"labels":[],"label_agreement":null},{"id":"W1982424442","doi":"10.1016/j.vaccine.2009.12.069","title":"Efficacy of poly[di(sodium carboxylatophenoxy)phosphazene] (PCPP) as mucosal adjuvant to induce protective immunity against respiratory pathogens","year":2010,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Bill and Melinda Gates Foundation","keywords":"Nasal administration; Immunology; Adjuvant; Antigen; Bordetella pertussis; Vaccination; Medicine; Immunoglobulin A; Microbiology; Immunoglobulin G; Biology","score_opus":0.009281857278858911,"score_gpt":0.24165437477519358,"score_spread":0.23237251749633467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982424442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951473,0.0017845852,0.0013502524,0.00012851083,0.00006837132,0.0000419904,0.00009170243,0.00004855814,0.0013387038],"genre_scores_gemma":[0.9966254,0.0006910832,0.0012046791,0.000058856825,0.000022153637,0.00002643364,0.00012129836,0.00000935134,0.0012408767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999877,0.000032608223,0.000008302763,0.000016926202,0.000029470231,0.000035649693],"domain_scores_gemma":[0.9998833,0.000037252037,0.00001934063,0.00001300692,0.000018815183,0.000028339478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034376915,0.00031754028,0.00020051816,0.00017709062,0.0001184326,0.00022335438,0.00020618289,0.00036806488,0.001173502],"category_scores_gemma":[0.00026690454,0.00013274705,0.00015436132,0.000097971424,0.00018623073,0.00023853578,0.00015639624,0.00062474085,0.00023062939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015464822,0.0003066563,0.0001683814,0.00012070433,0.000008999052,0.00004186555,0.000014858027,0.00027497354,0.98833627,0.0001437239,0.000091463866,0.008945569],"study_design_scores_gemma":[0.00019323434,0.004059897,0.0011324103,0.000009324808,0.000030590618,0.00010148338,0.000010027012,0.0009839535,0.9923545,0.000053710486,0.0010670234,0.000003817169],"about_ca_topic_score_codex":0.0003401917,"about_ca_topic_score_gemma":0.00041063357,"teacher_disagreement_score":0.001173502,"about_ca_system_score_codex":0.00015389192,"about_ca_system_score_gemma":0.00036961448,"threshold_uncertainty_score":0.0039257407},"labels":[],"label_agreement":null},{"id":"W1982667029","doi":"10.1371/journal.ppat.1000233","title":"FimH Adhesin of Type 1 Fimbriae Is a Potent Inducer of Innate Antimicrobial Responses Which Requires TLR4 and Type 1 Interferon Signalling","year":2008,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; McMaster University; McMaster University Medical Centre","funders":"Université Paris-Est Créteil Val-de-Marne; Canadian Institutes of Health Research; Hospital for Sick Children; Sick Kids Foundation","keywords":"Fimbria; Bacterial adhesin; Interferon; Innate immune system; Microbiology; Inducer; Biology; Antimicrobial; TLR4; Neisseria; Escherichia coli; Cell biology; Immunology; Gene; Signal transduction; Bacteria; Immune system; Genetics","score_opus":0.041350539448723266,"score_gpt":0.24747612352780957,"score_spread":0.2061255840790863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1982667029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99540013,0.0013551796,0.0019387241,0.00011856174,0.000021259199,0.000022002903,0.0003380674,0.000056908248,0.0007491806],"genre_scores_gemma":[0.9929056,0.0008753068,0.0027537185,0.00007236421,0.000013031577,0.000022802393,0.00064730993,0.000010517996,0.002699334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998796,0.000017377122,0.000007301651,0.000019581646,0.00004136817,0.000034769175],"domain_scores_gemma":[0.9999181,0.0000118282,0.000030305178,0.0000089841515,0.000009773245,0.000021049356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105338426,0.00029900996,0.00018396042,0.000184213,0.00010379026,0.0001804618,0.00011111851,0.00028896573,0.0010011155],"category_scores_gemma":[0.00009916114,0.00009857144,0.00018512458,0.00009095632,0.00018087747,0.00012093436,0.0002562978,0.0005502504,0.00021864029],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002793203,0.000011065958,0.00018910601,0.000014589996,0.0000016574616,0.000026906735,0.0000031711577,0.000007681535,0.9991167,0.00002271891,0.00001854771,0.0005598006],"study_design_scores_gemma":[0.000011128702,0.0004073835,0.020785812,0.0000092946375,0.000012853282,0.0005510074,0.00002510749,0.00042187478,0.97564155,0.00005338355,0.0020765543,0.0000040152336],"about_ca_topic_score_codex":0.0004602243,"about_ca_topic_score_gemma":0.00047182787,"teacher_disagreement_score":0.0010011155,"about_ca_system_score_codex":0.00018825727,"about_ca_system_score_gemma":0.00010637317,"threshold_uncertainty_score":0.0033490658},"labels":[],"label_agreement":null},{"id":"W1983294736","doi":"10.1053/meta.2000.9525","title":"The tissue distribution of tumor necrosis factor-α in rats: A compartmental model","year":2000,"lang":"en","type":"article","venue":"Metabolism","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Tumor necrosis factor alpha; Receptor; Mediator; In vivo; Endocrinology; Cytokine; Internal medicine; Cell; Biology; Chemistry; Cell biology; Cancer research; Immunology; Medicine; Biochemistry","score_opus":0.010613746412674298,"score_gpt":0.24233863022564578,"score_spread":0.2317248838129715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983294736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97903776,0.0014348383,0.018161545,0.0001652081,0.000037811697,0.000059453876,0.0002487064,0.00010518185,0.0007494743],"genre_scores_gemma":[0.9850756,0.0023216973,0.009603662,0.000054388478,0.000035499495,0.00016184618,0.00023775107,0.000058068425,0.0024515078],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99977726,0.000044317647,0.00001027805,0.00006786671,0.00003657655,0.00006369306],"domain_scores_gemma":[0.9994917,0.00008651239,0.00020195579,0.00009341614,0.00002585214,0.0001004881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041300853,0.0014659732,0.0009918072,0.0009315206,0.0003633195,0.00086697296,0.00074857706,0.0007156753,0.00089270534],"category_scores_gemma":[0.00029971232,0.00046499827,0.0007612322,0.0007172583,0.0012577274,0.0011526884,0.00058938464,0.0011323872,0.00026170356],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02206898,0.001653159,0.002325245,0.0002597242,0.0001554844,0.00038599755,0.00014738373,0.018171176,0.93848157,0.004049408,0.00019883743,0.012103019],"study_design_scores_gemma":[0.0011269419,0.016275678,0.008550463,0.00004873996,0.0009682307,0.001014744,0.0003628603,0.12633125,0.83332783,0.0079583675,0.0038340276,0.00020082096],"about_ca_topic_score_codex":0.0020251193,"about_ca_topic_score_gemma":0.0017478298,"teacher_disagreement_score":0.0020251193,"about_ca_system_score_codex":0.0009249525,"about_ca_system_score_gemma":0.0010153126,"threshold_uncertainty_score":0.006711066},"labels":[],"label_agreement":null},{"id":"W1983463692","doi":"10.1111/joa.12039","title":"Expression of Toll‐like receptor 9 in mouse and human lungs","year":2013,"lang":"en","type":"article","venue":"Journal of Anatomy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Receptor; Immune system; In situ hybridization; Lung; Toll-like receptor; Cell biology; RNA; Cytoplasm; Pathology; Immunology; Gene expression; Gene; Medicine; Internal medicine; Genetics","score_opus":0.005385724289357514,"score_gpt":0.238073256100457,"score_spread":0.23268753181109947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983463692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92940533,0.020376638,0.026756674,0.00055312755,0.00031577432,0.00026339514,0.0068996428,0.00065759826,0.01477186],"genre_scores_gemma":[0.9680862,0.005460156,0.012225878,0.00029859896,0.000054622265,0.0003438325,0.005983698,0.00011110428,0.007435907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962914,0.00005932266,0.00004005036,0.00013315979,0.00007779388,0.000060515027],"domain_scores_gemma":[0.99985063,0.00003808626,0.000028426519,0.000033403965,0.000019140856,0.000030322677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041844134,0.00026601157,0.0002251251,0.0009454586,0.00021887179,0.00048432295,0.00020646716,0.00046378333,0.004621459],"category_scores_gemma":[0.00023267286,0.00031424855,0.00033212517,0.00025195384,0.00029851633,0.00027949057,0.00023104205,0.00047647452,0.0013637403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005593614,0.000046579185,0.00092293095,0.000089772264,0.0000149996185,0.0002558142,0.000038951788,0.000048389862,0.99341476,0.00034267458,0.00016954,0.0040961746],"study_design_scores_gemma":[0.00017967873,0.0012757952,0.047583416,0.000090086585,0.00014737617,0.009448375,0.00026860822,0.0013928269,0.90939265,0.0006966469,0.029489119,0.000035521047],"about_ca_topic_score_codex":0.0002810918,"about_ca_topic_score_gemma":0.00025859132,"teacher_disagreement_score":0.004621459,"about_ca_system_score_codex":0.00021815322,"about_ca_system_score_gemma":0.00020934726,"threshold_uncertainty_score":0.015460253},"labels":[],"label_agreement":null},{"id":"W1983782874","doi":"10.1016/j.cyto.2008.07.105","title":"64 Interleukin-1β and tumor necrosis factor-α","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc","funders":"","keywords":"Tumor necrosis factor alpha; Tumor necrosis factor α; Interleukin 1β; Interleukin; Tumor necrosis factors; Medicine; Immunology; Cytokine","score_opus":0.01558389688261351,"score_gpt":0.21955946087755965,"score_spread":0.20397556399494615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983782874","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37092096,0.48541096,0.010529134,0.011968213,0.011133977,0.00020051538,0.0012384235,0.0002401698,0.108357735],"genre_scores_gemma":[0.62357634,0.15775989,0.004436775,0.0023938888,0.004187523,0.00019745994,0.0015315021,0.00004083772,0.20587578],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984396,0.000033357584,0.000018117362,0.000015739226,0.0000463084,0.000042408057],"domain_scores_gemma":[0.99990344,0.000017196928,0.00002504583,0.0000100654825,0.000022639046,0.000021587437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002281355,0.0007633883,0.00039368085,0.00076785556,0.00023783588,0.0012374776,0.00029475754,0.0007634087,0.0072134375],"category_scores_gemma":[0.00026332494,0.00016964611,0.00039890743,0.0004809998,0.00045399382,0.0007348067,0.00054385315,0.0009601168,0.002330864],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033376266,0.00061392155,0.0061492585,0.0018195724,0.00013734217,0.006378337,0.0005588993,0.0010465175,0.6774919,0.03716341,0.020630613,0.24467254],"study_design_scores_gemma":[0.0003971284,0.0025812846,0.04222135,0.00070980046,0.00024741533,0.01521101,0.0009378016,0.001494433,0.22887662,0.0358101,0.67143154,0.00008150014],"about_ca_topic_score_codex":0.00090388505,"about_ca_topic_score_gemma":0.0006398506,"teacher_disagreement_score":0.0072134375,"about_ca_system_score_codex":0.00043871423,"about_ca_system_score_gemma":0.00029873158,"threshold_uncertainty_score":0.024131358},"labels":[],"label_agreement":null},{"id":"W1983788321","doi":"10.1016/j.molimm.2008.02.028","title":"Porcine TLR8 and TLR7 are both activated by a selective TLR7 ligand, imiquimod","year":2008,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"","keywords":"TLR7; Transfection; Biology; Molecular biology; Receptor; TLR9; Toll-like receptor; Innate immune system; Cell biology; Biochemistry; Gene; Gene expression","score_opus":0.004861016315218218,"score_gpt":0.1947501258917874,"score_spread":0.18988910957656918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983788321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98335844,0.0031770633,0.0041289343,0.00044170485,0.0002507169,0.00008220874,0.0005074207,0.00013004539,0.007923355],"genre_scores_gemma":[0.98834664,0.0009747767,0.0036193489,0.0002704274,0.000084250016,0.000096621225,0.001502429,0.00002670433,0.0050788554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970764,0.000052134354,0.000018339788,0.000043535547,0.000063579464,0.00011474925],"domain_scores_gemma":[0.99990106,0.000017413262,0.000030134166,0.00001092589,0.000020038011,0.000020461579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019536783,0.000370842,0.00033119114,0.00024254207,0.00020337326,0.00034413917,0.0002683582,0.0005697618,0.0036689795],"category_scores_gemma":[0.00020036563,0.00021497523,0.00036683236,0.0001224064,0.00026996236,0.0003498374,0.0002767937,0.0007312532,0.0015107889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005092757,0.00004845141,0.00041152642,0.00007413402,0.000009718668,0.00006476853,0.000013501671,0.00008215182,0.99479216,0.00016059837,0.00026539958,0.0035683915],"study_design_scores_gemma":[0.00013302059,0.0021496944,0.006818062,0.000038373586,0.000052119387,0.00097313774,0.00014226374,0.0018715586,0.9752529,0.00020996324,0.012342979,0.000015879681],"about_ca_topic_score_codex":0.00033901626,"about_ca_topic_score_gemma":0.00044366592,"teacher_disagreement_score":0.0036689795,"about_ca_system_score_codex":0.0003629781,"about_ca_system_score_gemma":0.0002559142,"threshold_uncertainty_score":0.012274027},"labels":[],"label_agreement":null},{"id":"W1983959087","doi":"10.1007/s00441-010-1026-0","title":"Avian toll-like receptors","year":2010,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":254,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Zebra finch; Biology; Genome; TRIF; Gene; Phylogenetics; Evolutionary biology; Genetics; Receptor; Toll-like receptor; Innate immune system","score_opus":0.06895539845014342,"score_gpt":0.38519960533227166,"score_spread":0.31624420688212823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1983959087","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004814701,0.99079657,0.00066817174,0.00033144397,0.0014757508,0.00001716853,0.000066597626,0.000023440074,0.0061393557],"genre_scores_gemma":[0.0029486262,0.98277193,0.0010905584,0.00060499855,0.000961381,0.000017441405,0.00023442719,0.000004627603,0.0113659175],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998964,0.0000113742135,0.000014060209,0.000026463553,0.000036676345,0.000015005632],"domain_scores_gemma":[0.9998795,0.000031887008,0.000025628111,0.000006258764,0.000036601014,0.000020155541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035975617,0.0012204319,0.0008423835,0.0009790759,0.00018729958,0.00082347513,0.0006465024,0.00075173314,0.0041959053],"category_scores_gemma":[0.00030993755,0.00030492304,0.00023350045,0.00085194455,0.0005488777,0.0010592135,0.0005196542,0.0014022059,0.003464984],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015108686,0.00004452018,0.000177565,0.0042666006,0.000030693547,0.0002193729,0.000026246047,0.00030362574,0.011772106,0.002373985,0.037235405,0.94339883],"study_design_scores_gemma":[0.000015400916,0.000066750545,0.00062927936,0.0006152684,0.000038738028,0.00069209083,0.000028528486,0.00006666054,0.0013034197,0.0005405315,0.9959929,0.0000104203245],"about_ca_topic_score_codex":0.0012215013,"about_ca_topic_score_gemma":0.0022402776,"teacher_disagreement_score":0.0041959053,"about_ca_system_score_codex":0.0006856001,"about_ca_system_score_gemma":0.000709088,"threshold_uncertainty_score":0.014036655},"labels":[],"label_agreement":null},{"id":"W1984439686","doi":"10.1016/j.vetimm.2012.10.013","title":"Immunostimulatory properties of Toll-like receptor ligands in chickens","year":2012,"lang":"en","type":"review","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":125,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Guelph","funders":"","keywords":"Biology; Immune system; Receptor; Context (archaeology); Toll-like receptor; Acquired immune system; Microbiology; Innate immune system; Pattern recognition receptor; Antigen; Immunity; Virus; Cell biology; Immunology; Genetics","score_opus":0.05038663834894806,"score_gpt":0.2790222841439886,"score_spread":0.22863564579504053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984439686","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004930887,0.99877816,0.00011363092,0.00007470556,0.000074947544,0.0000021255953,0.0000133022,0.0000033214487,0.00044676464],"genre_scores_gemma":[0.0022641283,0.9964978,0.00021905279,0.000086546584,0.00014363613,0.0000039223,0.00003924637,9.193842e-7,0.0007447847],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999099,0.000010780872,0.000016649179,0.000022020891,0.000030371011,0.00001023063],"domain_scores_gemma":[0.9998592,0.00004812704,0.00004251492,0.0000035977368,0.000032074047,0.000014443758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038345004,0.00075449515,0.0008621488,0.0010222801,0.0001255016,0.0006222987,0.0005509928,0.0005976694,0.001132125],"category_scores_gemma":[0.0002625413,0.00022017727,0.00021393261,0.00079330266,0.0003767526,0.0005566669,0.00036238655,0.00072000665,0.00064295967],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022048173,0.00006025359,0.00039882833,0.0134959845,0.00005961554,0.00027611596,0.000047908692,0.00039856558,0.01875162,0.0010810249,0.007588734,0.9576209],"study_design_scores_gemma":[0.000060482445,0.0004560129,0.0056393673,0.0035558376,0.00030115026,0.0034548903,0.00012402408,0.00023252188,0.0074821454,0.00119301,0.977457,0.000043652],"about_ca_topic_score_codex":0.0013074571,"about_ca_topic_score_gemma":0.0018116288,"teacher_disagreement_score":0.0013074571,"about_ca_system_score_codex":0.0003920874,"about_ca_system_score_gemma":0.00049529225,"threshold_uncertainty_score":0.0037873387},"labels":[],"label_agreement":null},{"id":"W1984772099","doi":"10.1016/s0165-5728(01)00402-7","title":"Inflammatory gene transcription in human astrocytes exposed to hypoxia: roles of the nuclear factor-κB and autocrine stimulation","year":2001,"lang":"en","type":"article","venue":"Journal of Neuroimmunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surgical Specialties (Canada); Institute for Biological Sciences","funders":"","keywords":"Autocrine signalling; Hypoxia (environmental); Astrocyte; NFKB1; Biology; Interleukin; Endocrinology; Cell biology; Transcription factor; Receptor; Molecular biology; Internal medicine; Chemistry; Cytokine; Immunology; Biochemistry; Medicine; Gene; Central nervous system","score_opus":0.016181698240966092,"score_gpt":0.23429705972481818,"score_spread":0.21811536148385208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984772099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934291,0.0027864831,0.0011731818,0.00014968391,0.00007535557,0.000023661398,0.0006336441,0.000011072965,0.0017177761],"genre_scores_gemma":[0.993258,0.0014956674,0.0008487018,0.00007146231,0.000062033076,0.000055686432,0.00074300787,0.000009057478,0.0034564228],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985003,0.000023370341,0.000010292865,0.000029915933,0.000033996217,0.000052413045],"domain_scores_gemma":[0.99990714,0.000012937456,0.000013829958,0.000012041726,0.000030988907,0.000023100798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014429742,0.0001520993,0.00026431974,0.00023564482,0.00036212456,0.00031975182,0.00009583171,0.00018577742,0.001954222],"category_scores_gemma":[0.00018932816,0.00012769147,0.00024945624,0.00029568805,0.00023673815,0.00016516304,0.00017375458,0.00029542457,0.0004093998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033126988,0.00010077876,0.005368031,0.00013975555,0.00001995131,0.0006427741,0.00042927434,0.000044703673,0.98520315,0.00011536625,0.00018511282,0.004438333],"study_design_scores_gemma":[0.0002849289,0.0018215297,0.17425142,0.000034634824,0.00016369035,0.0037699547,0.0020136582,0.0011626506,0.80787164,0.00056175987,0.008042616,0.000021497255],"about_ca_topic_score_codex":0.0030367607,"about_ca_topic_score_gemma":0.0036639278,"teacher_disagreement_score":0.0030367607,"about_ca_system_score_codex":0.00019583465,"about_ca_system_score_gemma":0.00029646826,"threshold_uncertainty_score":0.0065375566},"labels":[],"label_agreement":null},{"id":"W1984774118","doi":"10.1158/1538-7445.am2014-1963","title":"Abstract 1963: Toll-like receptor activation in bacterial pneumonia increases lung cancer cell adhesion and metastasis formation","year":2014,"lang":"en","type":"article","venue":"Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"TLR2; TLR4; Metastasis; Pneumonia; Lung cancer; Immunology; Lipopolysaccharide; Medicine; Biology; Cancer research; Pathology; Cancer; Microbiology; Inflammation; Internal medicine","score_opus":0.029087493196512694,"score_gpt":0.3323720746071759,"score_spread":0.30328458141066317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1984774118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818532,0.005546213,0.0023909688,0.00094454054,0.00039813085,0.00010225695,0.0023732265,0.00020682314,0.006184664],"genre_scores_gemma":[0.9780822,0.0018905912,0.0019872931,0.0003263359,0.000086622356,0.00013506235,0.0021281156,0.000028362061,0.0153355235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974066,0.000047964135,0.000023514795,0.00002953745,0.0000669984,0.00009133018],"domain_scores_gemma":[0.99988186,0.000016112741,0.000024949646,0.000012667472,0.000016932063,0.0000475632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018786995,0.00046012818,0.0003643861,0.00029961093,0.00019500566,0.00028576003,0.00020134196,0.00066023914,0.00984927],"category_scores_gemma":[0.0001085436,0.00024274054,0.00050329836,0.0002015148,0.00016754311,0.00019798211,0.0002657112,0.0010465299,0.0021702494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000696653,0.00012812817,0.0002612187,0.00010642681,0.000010662993,0.00010813392,0.000006615306,0.000037280486,0.9967173,0.00007379925,0.00039780058,0.001455997],"study_design_scores_gemma":[0.00020131622,0.0022686813,0.016671097,0.00003299001,0.000034735043,0.0006831689,0.00006619933,0.00095513585,0.97392154,0.00011357608,0.005042435,0.000009130191],"about_ca_topic_score_codex":0.00064737664,"about_ca_topic_score_gemma":0.0006877682,"teacher_disagreement_score":0.00984927,"about_ca_system_score_codex":0.0003080839,"about_ca_system_score_gemma":0.00025295225,"threshold_uncertainty_score":0.03294915},"labels":[],"label_agreement":null},{"id":"W1985133443","doi":"10.1371/journal.pone.0052614","title":"Whole Cigarette Smoke Increased the Expression of TLRs, HBDs, and Proinflammory Cytokines by Human Gingival Epithelial Cells through Different Signaling Pathways","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fondation de l’Université Laval; Université Laval","keywords":"Signal transduction; Cigarette smoke; Cell biology; Biology; Toxicology","score_opus":0.03061025467023468,"score_gpt":0.21656337259220323,"score_spread":0.18595311792196856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985133443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99378985,0.004420353,0.00059899647,0.000090281974,0.00006841442,0.000029807747,0.00024346446,0.000016928767,0.0007420089],"genre_scores_gemma":[0.9917882,0.0029743712,0.00070427934,0.00013207512,0.000028513985,0.000051754618,0.00055908534,0.0000061682704,0.0037555816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998412,0.00002472572,0.000015918486,0.00002943286,0.000043279844,0.00004541021],"domain_scores_gemma":[0.999949,0.000011607438,0.0000066967605,0.0000075536077,0.000012629059,0.000012530372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017057423,0.00034784502,0.00034027296,0.00019232834,0.00015026549,0.00030142223,0.000076709184,0.00027425718,0.0024031147],"category_scores_gemma":[0.000103369886,0.00018005288,0.00035988208,0.0001873878,0.00016586331,0.00020341574,0.0002900079,0.00049371674,0.00028405368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009676449,0.00018111938,0.0015355037,0.0001308983,0.00001607644,0.00010708579,0.00007614862,0.00003706978,0.99270624,0.00004851212,0.0000548365,0.004138842],"study_design_scores_gemma":[0.000097453965,0.0033319816,0.09138317,0.000047099686,0.00010666805,0.00045367546,0.00037696626,0.0008133104,0.8985488,0.000166141,0.0046552853,0.000019404937],"about_ca_topic_score_codex":0.00055403716,"about_ca_topic_score_gemma":0.0010283868,"teacher_disagreement_score":0.0024031147,"about_ca_system_score_codex":0.00011509536,"about_ca_system_score_gemma":0.0002029641,"threshold_uncertainty_score":0.008039176},"labels":[],"label_agreement":null},{"id":"W1985469556","doi":"10.1182/blood-2003-01-0288","title":"Bacterial lipopolysaccharide directly induces angiogenesis through TRAF6-mediated activation of NF-κB and c-Jun N-terminal kinase","year":2003,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Angiogenesis; Tumor necrosis factor alpha; Cell biology; NF-κB; Signal transduction; Lipopolysaccharide; Basic fibroblast growth factor; Cancer research; Kinase; Cytokine; Biology; Chemistry; Receptor; Immunology; Growth factor; Biochemistry","score_opus":0.012092498646502267,"score_gpt":0.22365073887441606,"score_spread":0.21155824022791378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985469556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97963345,0.008443844,0.007231072,0.00019919137,0.000115835035,0.000055103897,0.0002924405,0.00015073686,0.003878316],"genre_scores_gemma":[0.9909915,0.0030624298,0.0034472665,0.000053755466,0.000042242507,0.000031192976,0.0003246009,0.000013233911,0.0020338583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983466,0.00004405714,0.000013143773,0.000017692244,0.000045602774,0.00004479693],"domain_scores_gemma":[0.9998468,0.000029057874,0.000047743953,0.000017132003,0.00001623584,0.000043018452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022129252,0.0004654262,0.00016241087,0.00023545642,0.00012350112,0.00023295321,0.00009040936,0.00017740075,0.0014474115],"category_scores_gemma":[0.00017029926,0.00010230785,0.00027447796,0.0000872899,0.00019935015,0.0002180902,0.00017321449,0.00043549435,0.0004057418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017045799,0.000043908272,0.00011572769,0.00005774535,0.0000039756683,0.00006771053,0.000006741744,0.00004307671,0.9973822,0.00012622937,0.000042572134,0.0019396301],"study_design_scores_gemma":[0.000028407998,0.0006320856,0.0042748665,0.000009472282,0.000013574216,0.00054444565,0.000015514663,0.00075449183,0.9911095,0.00015930815,0.0024544522,0.0000039504203],"about_ca_topic_score_codex":0.00014755313,"about_ca_topic_score_gemma":0.00020536316,"teacher_disagreement_score":0.0014474115,"about_ca_system_score_codex":0.00020874213,"about_ca_system_score_gemma":0.00013439682,"threshold_uncertainty_score":0.004842043},"labels":[],"label_agreement":null},{"id":"W1985672380","doi":"10.1016/s0016-5085(00)82459-2","title":"Glucocorticoids induce monocyte apoptosis but protect intestinal epithelial cells in a co-culture model","year":2000,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Apoptosis; Monocyte; Cell biology; Cancer research; Chemistry; Immunology; Biology; Biochemistry","score_opus":0.010456057782885853,"score_gpt":0.2301212344916345,"score_spread":0.21966517670874863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1985672380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870111,0.0062188585,0.001756118,0.00049001205,0.0004714962,0.00008728884,0.0010729741,0.00008877132,0.0028035082],"genre_scores_gemma":[0.9860793,0.0027984295,0.0020457956,0.00018521985,0.00016772331,0.00012775982,0.0012692225,0.000029555555,0.007296965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893135,0.0002959337,0.00007843513,0.00015271269,0.0002548052,0.00028672052],"domain_scores_gemma":[0.9990891,0.00015785985,0.00014077296,0.00029216555,0.00009546929,0.00022457882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047624772,0.0007591434,0.0010996069,0.000639306,0.00054482854,0.0006791678,0.00055470195,0.00086448836,0.0029008975],"category_scores_gemma":[0.00028237014,0.00033821425,0.0010121197,0.0005605072,0.0005386185,0.00046353298,0.00047231073,0.0029249473,0.0014161533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060556103,0.00051715184,0.00080659846,0.00015027086,0.00003092058,0.0004961668,0.00011829874,0.00009194227,0.98782384,0.00019610925,0.0004698561,0.0032432457],"study_design_scores_gemma":[0.00032429604,0.0043783016,0.01816863,0.000043564472,0.00009193242,0.0010516921,0.00036663175,0.0007764152,0.96751994,0.00013568152,0.007114819,0.000028071678],"about_ca_topic_score_codex":0.0019489196,"about_ca_topic_score_gemma":0.0048647895,"teacher_disagreement_score":0.0029008975,"about_ca_system_score_codex":0.00053955085,"about_ca_system_score_gemma":0.00054636085,"threshold_uncertainty_score":0.009704471},"labels":[],"label_agreement":null},{"id":"W1986013893","doi":"10.1016/j.clim.2006.02.003","title":"Towards subtlety: Understanding the role of Toll-like receptor signaling in susceptibility to human infections","year":2006,"lang":"en","type":"review","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Sick Kids Foundation; Canadian Child Health Clinician Scientist Program","keywords":"Innate immune system; Biology; Immunology; Immune system; Genotyping; Immunity; Toll; Toll-like receptor; Acquired immune system; Pattern recognition receptor; Signal transduction; Receptor; Gene; Genetics; Genotype","score_opus":0.09855333787123541,"score_gpt":0.38933768326917473,"score_spread":0.2907843453979393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986013893","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000115544186,0.9969439,0.00044216038,0.0012046769,0.00066217885,0.0000031211125,0.000008164562,0.000009319743,0.00061090855],"genre_scores_gemma":[0.0007261624,0.9961443,0.0004853261,0.00091346184,0.0010847969,0.0000059471163,0.000014234291,0.00000186065,0.0006238501],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99965334,0.00006975177,0.000047398935,0.000064195614,0.00013739427,0.000027936318],"domain_scores_gemma":[0.99903417,0.0005026664,0.00008614856,0.00003052023,0.00024847497,0.00009818416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018115375,0.0012187677,0.0020781038,0.0015876535,0.00030671526,0.0017579634,0.0016249206,0.0022946824,0.0020335305],"category_scores_gemma":[0.001900059,0.00034147812,0.0003781367,0.0015630167,0.0016665164,0.0032551575,0.001012821,0.003897023,0.0016736097],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001728322,0.0000714923,0.00033240093,0.0053634234,0.00007453232,0.00025285402,0.00008998583,0.00040991133,0.0031417173,0.008057543,0.046243783,0.9357895],"study_design_scores_gemma":[0.000037028934,0.00011345019,0.0011528701,0.002005676,0.00007398309,0.001609577,0.00012134039,0.00017267525,0.0006679348,0.008250529,0.9857637,0.000031083986],"about_ca_topic_score_codex":0.0010465452,"about_ca_topic_score_gemma":0.0017035754,"teacher_disagreement_score":0.0022946824,"about_ca_system_score_codex":0.00097235723,"about_ca_system_score_gemma":0.001269295,"threshold_uncertainty_score":0.009580433},"labels":[],"label_agreement":null},{"id":"W1986141266","doi":"10.1016/j.dci.2009.12.018","title":"Co-stimulation with TLR7/8 and TLR9 agonists induce down-regulation of innate immune responses in sheep blood mononuclear and B cells","year":2010,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"","keywords":"TLR9; TLR7; Agonist; Biology; Innate immune system; TLR3; Stimulation; Immune system; Peripheral blood mononuclear cell; CpG Oligodeoxynucleotide; Receptor; Immunology; TLR4; Toll-like receptor; Endocrinology; Gene expression; In vitro; DNA methylation; Biochemistry","score_opus":0.01259822582355592,"score_gpt":0.2509423307871513,"score_spread":0.23834410496359537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986141266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925328,0.0023261297,0.0011298794,0.00018666776,0.00020713458,0.00004645638,0.00042407503,0.000047017842,0.0030998664],"genre_scores_gemma":[0.99074894,0.00097308954,0.0014216957,0.00024364876,0.00014492197,0.000110515044,0.0012043937,0.0000253715,0.005127401],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99941385,0.00015898948,0.00006807964,0.0000735635,0.000105615414,0.00018006525],"domain_scores_gemma":[0.99967456,0.000112532725,0.000039195478,0.000049622817,0.00003793355,0.000086166794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033030982,0.0004322928,0.00061087986,0.00028463244,0.00028093162,0.0005557728,0.00022970462,0.0004401424,0.004828498],"category_scores_gemma":[0.0002599199,0.0002176052,0.0004676362,0.00018561223,0.00025996228,0.0001975842,0.00050599553,0.0013475508,0.0021184909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005179927,0.00007137672,0.00025596333,0.000054336288,0.000008593471,0.000118228374,0.000027401615,0.000021368727,0.99777955,0.000033517914,0.000093653616,0.0010180396],"study_design_scores_gemma":[0.00009890343,0.0010035732,0.016818244,0.00002949805,0.000057225905,0.00075477094,0.00019039716,0.0006013847,0.974736,0.00009081638,0.005607463,0.000011786381],"about_ca_topic_score_codex":0.00031593168,"about_ca_topic_score_gemma":0.0007095024,"teacher_disagreement_score":0.004828498,"about_ca_system_score_codex":0.00017024032,"about_ca_system_score_gemma":0.00022601614,"threshold_uncertainty_score":0.016152859},"labels":[],"label_agreement":null},{"id":"W1986167289","doi":"10.1371/journal.pone.0023940","title":"Different Toll-Like Receptor Stimuli Have a Profound Impact on Cytokines Required to Break Tolerance and Induce Autoimmunity","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Autoimmunity; Immunology; TLR3; Immune system; Cytokine; Toll-like receptor; TLR7; Biology; Dendritic cell; TLR4; T cell; Acquired immune system; Cell biology; Innate immune system","score_opus":0.07046736077447767,"score_gpt":0.2624176342240883,"score_spread":0.19195027344961063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986167289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99190146,0.0037190553,0.0023991906,0.00013529396,0.00006170378,0.000021618996,0.0002501185,0.000056840825,0.0014547324],"genre_scores_gemma":[0.9938279,0.002051967,0.0030215918,0.0001359617,0.000025835703,0.000031595,0.00026606812,0.000026608219,0.00061256654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995579,0.00011417245,0.00008660752,0.00005268334,0.00009006694,0.000098479235],"domain_scores_gemma":[0.9996573,0.00010424949,0.00006262756,0.000057310295,0.00002188648,0.00009655635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048770232,0.00049205736,0.000438483,0.0003437839,0.00013753826,0.0005343067,0.00015363518,0.0004452036,0.0009879011],"category_scores_gemma":[0.0003682758,0.00018109492,0.00040794606,0.00023477335,0.00033045345,0.00041255323,0.00031037666,0.00085779163,0.000339928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025279302,0.000030293428,0.00019890604,0.000065032604,0.0000038910052,0.0000719332,0.000008699848,0.000061447805,0.9977076,0.00009085287,0.000009473128,0.0014991087],"study_design_scores_gemma":[0.000033238175,0.00063060323,0.0060880575,0.000015749369,0.000031722648,0.0005098885,0.000038991628,0.00017357324,0.9910793,0.00018533655,0.0012055608,0.000007937851],"about_ca_topic_score_codex":0.000033267832,"about_ca_topic_score_gemma":0.00007274902,"teacher_disagreement_score":0.0009879011,"about_ca_system_score_codex":0.00019253824,"about_ca_system_score_gemma":0.0001441364,"threshold_uncertainty_score":0.0033048391},"labels":[],"label_agreement":null},{"id":"W1986230116","doi":"10.1007/978-94-015-9702-9_13","title":"The Therapeutic Potential of Interleukin 10 in Infection and Inflammation","year":2001,"lang":"en","type":"article","venue":"Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Immunology; Inflammation; Medicine; Immune system; Sepsis; Cytokine","score_opus":0.007459929502722145,"score_gpt":0.22977516964588443,"score_spread":0.22231524014316228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986230116","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05773699,0.891095,0.0035673839,0.02038522,0.0072499756,0.000039221017,0.00018801562,0.00009215081,0.019646104],"genre_scores_gemma":[0.51004,0.4569955,0.005092734,0.005941876,0.006910956,0.0001849307,0.00020971568,0.00002658256,0.014597793],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99981207,0.00007261767,0.000009362703,0.000012999941,0.000041305535,0.00005151383],"domain_scores_gemma":[0.9998049,0.0000972116,0.00002237155,0.000009855623,0.000018972152,0.000046737612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007244125,0.00041863165,0.00044354834,0.00037026126,0.0002065727,0.00087240455,0.0002727128,0.0008541674,0.0026600915],"category_scores_gemma":[0.0004419353,0.00010376156,0.0002680291,0.00021875477,0.00074552116,0.0007021604,0.00034667854,0.0026975847,0.0003961516],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012663088,0.0011639546,0.0017511228,0.0024629019,0.00011900152,0.0013869401,0.00023019117,0.001240843,0.10640999,0.046380803,0.027596848,0.7985943],"study_design_scores_gemma":[0.0037654638,0.012084376,0.011030886,0.0015860816,0.00039972222,0.005068377,0.00057049136,0.001999163,0.07705144,0.044899568,0.8414324,0.00011204293],"about_ca_topic_score_codex":0.00017602129,"about_ca_topic_score_gemma":0.00039605342,"teacher_disagreement_score":0.0026600915,"about_ca_system_score_codex":0.00033900436,"about_ca_system_score_gemma":0.00049117795,"threshold_uncertainty_score":0.008898914},"labels":[],"label_agreement":null},{"id":"W1986661099","doi":"10.1016/j.it.2007.10.002","title":"Innate immune recognition at the epithelial barrier drives adaptive immunity: APCs take the back seat","year":2007,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":107,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Howard Hughes Medical Institute","keywords":"Innate immune system; Pattern recognition receptor; Acquired immune system; Biology; Immunology; Innate lymphoid cell; Immune system; Immunity; Receptor; Classical complement pathway; Complement system","score_opus":0.06277489154835084,"score_gpt":0.31582698276616206,"score_spread":0.25305209121781125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1986661099","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028593003,0.9939908,0.00057177164,0.0017028869,0.0017187505,0.000004065012,0.000021473523,0.000026666923,0.0016777464],"genre_scores_gemma":[0.0013172561,0.9934453,0.00053830375,0.0012175641,0.00096831634,0.0000072600074,0.00003494638,0.000004005283,0.002467068],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977344,0.000026910073,0.000023031589,0.00004812305,0.00010395412,0.000024624927],"domain_scores_gemma":[0.9994804,0.00016340989,0.00005302169,0.000018099654,0.00017686051,0.00010825545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085865223,0.0012500939,0.0019642557,0.0007716722,0.00038084725,0.0019265319,0.0012539482,0.0020173092,0.0048453957],"category_scores_gemma":[0.00064311136,0.00026194745,0.00030279814,0.0013083384,0.0010596929,0.0033367549,0.0008267022,0.0032078822,0.0056204707],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017790326,0.0000484909,0.00028122452,0.0044354,0.000044385015,0.0002410555,0.000040159633,0.00024625403,0.008630751,0.0053217923,0.06564302,0.9148896],"study_design_scores_gemma":[0.000024447358,0.000064169806,0.00078793365,0.0009328904,0.000047401976,0.0008385795,0.000112015994,0.000090952315,0.0014388084,0.0034837234,0.99216086,0.000018298251],"about_ca_topic_score_codex":0.0004575257,"about_ca_topic_score_gemma":0.0009451412,"teacher_disagreement_score":0.0048453957,"about_ca_system_score_codex":0.000755451,"about_ca_system_score_gemma":0.0010929831,"threshold_uncertainty_score":0.016209543},"labels":[],"label_agreement":null},{"id":"W1987058838","doi":"10.1016/j.bbrc.2009.07.061","title":"3′,5′-Cyclic diguanylic acid elicits mucosal immunity against bacterial infection","year":2009,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences; Brock University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Immunity; Mucosal immunity; Microbiology; Biology; Chemistry; Immunology; Immune system","score_opus":0.0508918582036232,"score_gpt":0.34828076391360063,"score_spread":0.29738890570997745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987058838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929053,0.001745492,0.00083893904,0.00016003227,0.00015266877,0.00007836299,0.00022589635,0.000090064175,0.00380325],"genre_scores_gemma":[0.9952508,0.00082722306,0.00095310033,0.00020408016,0.000054724667,0.00006592524,0.00035950803,0.000018798584,0.0022658107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997403,0.000055909666,0.000018313507,0.000030861705,0.0000467944,0.00010768354],"domain_scores_gemma":[0.99978715,0.00004761579,0.000024496207,0.00003555438,0.000018247592,0.00008688677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003428351,0.0005075795,0.0005186329,0.0003481997,0.0002877498,0.0004252051,0.00026136145,0.00078772823,0.0017036704],"category_scores_gemma":[0.00035811777,0.0003283178,0.0003293806,0.00024832122,0.00038646552,0.00022931509,0.00028596935,0.0012938282,0.00084300817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010633614,0.00009982767,0.000116986506,0.00006899591,0.0000039658953,0.000084568695,0.000017194074,0.00008862766,0.9959889,0.00012071352,0.00005900835,0.0022879303],"study_design_scores_gemma":[0.00027388145,0.003135931,0.0071049784,0.000027934497,0.000027222206,0.00022475013,0.00006023473,0.00075405167,0.9864824,0.00018748979,0.0017085603,0.000012596565],"about_ca_topic_score_codex":0.00070255494,"about_ca_topic_score_gemma":0.0010069059,"teacher_disagreement_score":0.0017036704,"about_ca_system_score_codex":0.0005059791,"about_ca_system_score_gemma":0.00052063784,"threshold_uncertainty_score":0.005699396},"labels":[],"label_agreement":null},{"id":"W1987143582","doi":"10.1016/j.carres.2011.05.018","title":"Synthesis of a dimeric monosaccharide lipid A mimic and its synergistic effect on the immunostimulatory activity of lipopolysaccharide","year":2011,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemistry; Lipopolysaccharide; Lipid A; TLR4; Monosaccharide; Toll-like receptor; Ligand (biochemistry); Receptor; Immune system; Biochemistry; Glycolipid; Innate immune system; Immunology; Biology","score_opus":0.053809461883153525,"score_gpt":0.2930130521690413,"score_spread":0.23920359028588775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987143582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955647,0.000990632,0.002197022,0.000075070144,0.00004847369,0.000029205272,0.00009585304,0.00002893806,0.0009702503],"genre_scores_gemma":[0.9958668,0.00050284277,0.0021369217,0.000028169381,0.00001683881,0.000023316563,0.00018726996,0.0000145987315,0.0012232383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989223,0.00003312792,0.0000120622135,0.000017333778,0.000019415225,0.000025867086],"domain_scores_gemma":[0.9998847,0.000023138466,0.000022034747,0.000021526881,0.000010807819,0.00003769987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018058831,0.0003565015,0.00027651465,0.0001794602,0.00015299648,0.00027043995,0.00021539256,0.0003103616,0.0010708633],"category_scores_gemma":[0.00023040321,0.0001675008,0.00029943872,0.00016938281,0.0001659291,0.00020746689,0.00023290879,0.00038085526,0.00036378077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041527656,0.00004391814,0.000043606462,0.000019738618,0.0000035536475,0.000058875605,0.000007710957,0.00015307462,0.99829155,0.00010949593,0.000021691434,0.0008314633],"study_design_scores_gemma":[0.000021680413,0.00037428967,0.00019468059,0.0000019792747,0.000008010767,0.00010141457,0.000006380744,0.00055618235,0.99800414,0.000026620406,0.00070078333,0.000003986009],"about_ca_topic_score_codex":0.00025561545,"about_ca_topic_score_gemma":0.00022943954,"teacher_disagreement_score":0.0010708633,"about_ca_system_score_codex":0.00019336153,"about_ca_system_score_gemma":0.00025136577,"threshold_uncertainty_score":0.0035823584},"labels":[],"label_agreement":null},{"id":"W1987149968","doi":"10.1186/cc5277","title":"Mechanism and effectiveness of polymyxin B-immobilized fiber columns for removing mediators (HMBG-1, 2-arachidonoyl glycerol, anandamide, PAI-1, protein C and IL-6) in septic shock patients","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Hemoperfusion; Septic shock; Medicine; Polymyxin B; Polymyxin; Microbiology; Pharmacology; Intensive care medicine; Surgery; Antibiotics; Sepsis; Biology","score_opus":0.0058320489471865074,"score_gpt":0.254372346369081,"score_spread":0.2485402974218945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987149968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98243666,0.015462213,0.0008862742,0.00018572419,0.000061567895,0.000049313116,0.00006411641,0.000030507576,0.00082356826],"genre_scores_gemma":[0.9958677,0.0028760938,0.0004433864,0.00009051243,0.00004934309,0.000033618686,0.0000754504,0.0000036696886,0.0005602207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998914,0.000037143007,0.0000055036144,0.000011748604,0.000017701077,0.00003640959],"domain_scores_gemma":[0.99988353,0.00003867694,0.000025302936,0.000009836041,0.000011280969,0.000031301293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035028477,0.00032127663,0.0003436589,0.00014995561,0.00013302824,0.00025139932,0.00028589656,0.00030844536,0.0011756177],"category_scores_gemma":[0.0003362725,0.00015361731,0.00038810808,0.00005777361,0.00023369024,0.00019212159,0.00014919414,0.000344237,0.000207527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013773016,0.0012152134,0.0046331636,0.00074243033,0.00020761357,0.00046954444,0.00012420214,0.0004917413,0.92470574,0.00051373884,0.00074299163,0.052380685],"study_design_scores_gemma":[0.0025818744,0.023614585,0.09676138,0.00011251676,0.00074207195,0.0018505743,0.00012727467,0.0034130116,0.86548644,0.00036073005,0.004918565,0.000031120057],"about_ca_topic_score_codex":0.00050628645,"about_ca_topic_score_gemma":0.00026677988,"teacher_disagreement_score":0.0011756177,"about_ca_system_score_codex":0.0001827954,"about_ca_system_score_gemma":0.00021374301,"threshold_uncertainty_score":0.0039328337},"labels":[],"label_agreement":null},{"id":"W1987375408","doi":"10.1002/cyto.a.20943","title":"Correlation analysis of intracellular and secreted cytokines via the generalized integrated mean fluorescence intensity","year":2010,"lang":"en","type":"article","venue":"Cytometry Part A","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia; Terry Fox Research Institute; BC Cancer Agency","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Biomedical Imaging and Bioengineering; Hospital for Sick Children; National Institutes of Health; Michael Smith Health Research BC; Canadian Institutes of Health Research; Mitacs; Children's Health Research Institute","keywords":"Cytokine; Immune system; Innate immune system; Flow cytometry; Population; Immunology; Biology; Immunogenicity; Cytometry; Medicine","score_opus":0.009155600181188146,"score_gpt":0.22739419755246998,"score_spread":0.21823859737128184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987375408","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16671467,0.0007145903,0.8291533,0.00009874988,0.000027016598,0.00017990387,0.0006176266,0.0010695554,0.0014246145],"genre_scores_gemma":[0.72795314,0.0006920801,0.26861095,0.00010248108,0.000041580246,0.00051431666,0.000861488,0.00017734163,0.0010465817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981488,0.0008017531,0.0000865134,0.00044393245,0.0004087939,0.000110157875],"domain_scores_gemma":[0.99783367,0.0011057046,0.00046814748,0.00030075578,0.00024645912,0.000045163495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034732083,0.00080304756,0.0009146629,0.002006411,0.00014586508,0.00070637057,0.0006273226,0.00060296874,0.0013591524],"category_scores_gemma":[0.0055893655,0.00027228205,0.000865214,0.0017670122,0.00064098433,0.0010362057,0.0006516193,0.00083122717,0.00039106046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012781956,0.00031942353,0.105325274,0.0012973552,0.0013284612,0.0004941161,0.00077957654,0.12962927,0.43780088,0.020476364,0.0024970868,0.29877397],"study_design_scores_gemma":[0.000037193116,0.00082544045,0.090259284,0.00004597628,0.00025029108,0.00086365704,0.00013854404,0.77236724,0.11304988,0.016641656,0.005351926,0.00016886982],"about_ca_topic_score_codex":0.00076882425,"about_ca_topic_score_gemma":0.00063687825,"teacher_disagreement_score":0.0034732083,"about_ca_system_score_codex":0.00068538554,"about_ca_system_score_gemma":0.00037882707,"threshold_uncertainty_score":0.018368304},"labels":[],"label_agreement":null},{"id":"W1987410025","doi":"10.1038/ni1297","title":"The Unc93b1 mutation 3d disrupts exogenous antigen presentation and signaling via Toll-like receptors 3, 7 and 9","year":2006,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":710,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Endoplasmic reticulum; Biology; Antigen presentation; Cell biology; RNA; Cross-presentation; Major histocompatibility complex; Receptor; Endosome; Antigen; Molecular biology; MHC class I; Gene; Intracellular; Genetics; T cell; Immune system","score_opus":0.0029230726170101787,"score_gpt":0.21799836703817496,"score_spread":0.21507529442116477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987410025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9793991,0.0010225757,0.008961874,0.0008732534,0.00041784634,0.00006644423,0.0031339598,0.0007764895,0.0053484105],"genre_scores_gemma":[0.9903475,0.00036405385,0.004741248,0.00030163198,0.000025260588,0.000056168534,0.0009397009,0.00040810165,0.002816323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993512,0.0001144713,0.000096098025,0.00011530938,0.00020420403,0.000118671225],"domain_scores_gemma":[0.9990927,0.00019949337,0.00035818038,0.00012706064,0.000046010242,0.00017660824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003121051,0.0011143825,0.000614298,0.0008509791,0.0007506934,0.00080778485,0.0010984757,0.0016599417,0.005243856],"category_scores_gemma":[0.000493845,0.00048485622,0.00092407333,0.0005168476,0.0011986359,0.0003487256,0.0008531867,0.002320569,0.00303891],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002603277,0.000069625625,0.0001974935,0.00003749797,0.000028630873,0.00060740806,0.00003081403,0.00037238587,0.99579406,0.00058664277,0.00043414175,0.0015810628],"study_design_scores_gemma":[0.00010848706,0.00015858815,0.0051990156,0.000053690495,0.000052494346,0.0023426414,0.000119852324,0.0031462433,0.9811952,0.00054668554,0.007023589,0.00005349842],"about_ca_topic_score_codex":0.0029402173,"about_ca_topic_score_gemma":0.0030767692,"teacher_disagreement_score":0.005243856,"about_ca_system_score_codex":0.00080432,"about_ca_system_score_gemma":0.0004659478,"threshold_uncertainty_score":0.017542481},"labels":[],"label_agreement":null},{"id":"W1987553649","doi":"10.1016/j.dci.2012.03.012","title":"Genomic structure, molecular characterization and functional analysis of Pekin duck interleukin-10","year":2012,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation","keywords":"Biology; Exon; Gene; Intron; Molecular biology; Alternative splicing; Coding region; Genetics; Homology (biology); RNA splicing; Untranslated region; Sequence analysis; Peptide sequence; Complementary DNA; Recombinant DNA; RNA","score_opus":0.01736844230512051,"score_gpt":0.24327740722226424,"score_spread":0.22590896491714374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987553649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935377,0.00048104877,0.0036448946,0.00010538014,0.000025366355,0.0000199855,0.001320092,0.000037647944,0.00082785485],"genre_scores_gemma":[0.9865653,0.00026390422,0.0031330555,0.000097238946,0.000017197297,0.000023838427,0.005432749,0.000047725964,0.0044190437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989724,0.000011988944,0.000008776989,0.00004032297,0.000018329942,0.00002326324],"domain_scores_gemma":[0.9996093,0.00011431756,0.00010076865,0.000051068186,0.000040833005,0.000083626874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009165939,0.00029180318,0.00030784958,0.0003935084,0.00023557991,0.00043945338,0.0003083848,0.00028817146,0.0014511399],"category_scores_gemma":[0.00023821645,0.0002081709,0.00043173935,0.00025629584,0.00032376536,0.0001524501,0.00025160218,0.0007837416,0.0009727617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017273227,0.000023962695,0.0006475138,0.000025935786,0.000007227469,0.00018309578,0.000047942875,0.00011353561,0.9972078,0.00010450218,0.000036328813,0.0014292966],"study_design_scores_gemma":[0.00007853132,0.00066564564,0.1968435,0.000034622735,0.00016107356,0.002594746,0.0006629592,0.0031481923,0.77739686,0.00040464787,0.017957129,0.000052180396],"about_ca_topic_score_codex":0.002217626,"about_ca_topic_score_gemma":0.0026580011,"teacher_disagreement_score":0.002217626,"about_ca_system_score_codex":0.0004118944,"about_ca_system_score_gemma":0.00023021638,"threshold_uncertainty_score":0.0048545003},"labels":[],"label_agreement":null},{"id":"W1987659249","doi":"10.1097/shk.0b013e31804d40be","title":"INTRAPULMONARY DELIVERY OF ETHYL PYRUVATE ATTENUATES LIPOPOLYSACCHARIDE- AND LIPOTEICHOIC ACID-INDUCED LUNG INFLAMMATION IN VIVO","year":2007,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lipoteichoic acid; Lipopolysaccharide; Bronchoalveolar lavage; Inflammation; In vivo; Tumor necrosis factor alpha; Lung; Pharmacology; Nasal administration; Chemistry; Medicine; Immunology; Biology; Staphylococcus aureus; Internal medicine; Bacteria","score_opus":0.00793538976492251,"score_gpt":0.2358842604963723,"score_spread":0.2279488707314498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987659249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941362,0.0020521085,0.002753685,0.00016582552,0.0000667728,0.00004845628,0.00009328762,0.00011041843,0.00057323585],"genre_scores_gemma":[0.9926644,0.0015307756,0.0025635278,0.00010817349,0.000058998285,0.000048098744,0.00028416514,0.000034602657,0.002707177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997346,0.00008034777,0.000020138288,0.000030736643,0.00004741052,0.00008678258],"domain_scores_gemma":[0.99969065,0.000056535322,0.00009674457,0.000040187275,0.00002920969,0.000086681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000350212,0.0007994403,0.00079458574,0.0003310955,0.00017764601,0.00047105848,0.0003042763,0.00045742537,0.0010916985],"category_scores_gemma":[0.00030494863,0.00021325343,0.0002701964,0.00018194699,0.0005461026,0.00053335185,0.00023298207,0.0013967209,0.00039826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001354307,0.0005227841,0.00011380685,0.000057647783,0.000011209068,0.000063070824,0.000023593371,0.00007978673,0.9942063,0.00005899066,0.00004564901,0.0034628704],"study_design_scores_gemma":[0.00015118167,0.007829951,0.0022062552,0.000010879434,0.000038916223,0.00014858083,0.000047262976,0.0008653912,0.98778266,0.000039645045,0.00087384577,0.000005435892],"about_ca_topic_score_codex":0.0003333719,"about_ca_topic_score_gemma":0.0004924383,"teacher_disagreement_score":0.0010916985,"about_ca_system_score_codex":0.00023022908,"about_ca_system_score_gemma":0.00028575785,"threshold_uncertainty_score":0.0036520362},"labels":[],"label_agreement":null},{"id":"W1987882762","doi":"10.1016/j.vetimm.2006.11.013","title":"Systemic innate immune responses following intrapulmonary delivery of CpG oligodeoxynucleotides in sheep","year":2006,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases","keywords":"CpG Oligodeoxynucleotide; Systemic administration; Innate immune system; Immunology; Immune system; CpG site; Biology; Pharmacology; In vivo","score_opus":0.009130744115897477,"score_gpt":0.2242981103636265,"score_spread":0.21516736624772903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987882762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99842995,0.00044099425,0.00060823926,0.000059931586,0.00004038694,0.000017999615,0.000050823128,0.000019987267,0.00033170942],"genre_scores_gemma":[0.9975061,0.00034434782,0.00040512712,0.00007175282,0.00003289419,0.00004291095,0.00010411269,0.000009588818,0.0014832288],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997881,0.0000332189,0.000016392876,0.00006573197,0.00003670407,0.000059747734],"domain_scores_gemma":[0.9996039,0.00015605528,0.000088248205,0.000043325606,0.000034922865,0.00007345634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002620731,0.00034570709,0.00064305466,0.00022105717,0.0001670123,0.0003065191,0.0001908392,0.00075957103,0.00073576],"category_scores_gemma":[0.0005422527,0.0002617093,0.00029162684,0.000088188564,0.0006070599,0.00036650288,0.00021100754,0.0014225121,0.00032483137],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0041565215,0.00022708657,0.0012206604,0.00013193472,0.000013896882,0.0008431663,0.00019802857,0.0001395249,0.98925066,0.000068194415,0.000114903225,0.00363556],"study_design_scores_gemma":[0.00031869614,0.02295381,0.034268,0.000067993795,0.00018524396,0.002585546,0.00074325164,0.0031459192,0.9334235,0.00030185634,0.0019689852,0.000037192807],"about_ca_topic_score_codex":0.0007168121,"about_ca_topic_score_gemma":0.0011073758,"teacher_disagreement_score":0.00075957103,"about_ca_system_score_codex":0.0003235543,"about_ca_system_score_gemma":0.0002217223,"threshold_uncertainty_score":0.0024613738},"labels":[],"label_agreement":null},{"id":"W1987883630","doi":"10.1515/bc.2002.138","title":"Anti-Inflammatory Effect of Pre-Elafin in Lipopolysaccharide-Induced Acute Lung Inflammation","year":2002,"lang":"en","type":"article","venue":"Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Elafin; Bronchoalveolar lavage; Inflammation; Lipopolysaccharide; Neutrophil elastase; Elastase; Pharmacology; Medicine; Immunology; Lung; Chemistry; Internal medicine; Biochemistry; Enzyme","score_opus":0.010582894807593857,"score_gpt":0.23752630722500498,"score_spread":0.22694341241741112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1987883630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915303,0.0063100243,0.0013133159,0.00006392245,0.00003156702,0.000026224594,0.00014971643,0.00004509601,0.00052973896],"genre_scores_gemma":[0.9918435,0.003401933,0.0027004394,0.00011128583,0.000046365978,0.000038395,0.0005217611,0.000011809434,0.0013244975],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999409,0.000011466863,0.000004729987,0.000008849387,0.000014865598,0.000019167943],"domain_scores_gemma":[0.99991226,0.000015810092,0.000027342436,0.000006077368,0.00001071546,0.000027828215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009354658,0.0004852259,0.0004200175,0.00019032492,0.00009743068,0.0002001222,0.00014097217,0.00025064158,0.0008369516],"category_scores_gemma":[0.0001051983,0.00006583293,0.0001790348,0.00008642198,0.00015814476,0.00021663368,0.00010356584,0.00055255974,0.00017887798],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012649063,0.0002643287,0.00021288464,0.00011914081,0.000011983712,0.00007032104,0.0000098502305,0.0000953141,0.9926472,0.000032807588,0.000034965957,0.0052364124],"study_design_scores_gemma":[0.00014059478,0.005661341,0.007343458,0.000018256655,0.000046165398,0.00051593204,0.000026348214,0.00036808217,0.983548,0.00004586598,0.0022780886,0.000007855205],"about_ca_topic_score_codex":0.00009160863,"about_ca_topic_score_gemma":0.00018551225,"teacher_disagreement_score":0.0008369516,"about_ca_system_score_codex":0.000089302484,"about_ca_system_score_gemma":0.0001076608,"threshold_uncertainty_score":0.002799809},"labels":[],"label_agreement":null},{"id":"W1988299037","doi":"10.1016/j.immuni.2013.09.004","title":"Processing of Human Toll-like Receptor 7 by Furin-like Proprotein Convertases Is Required for Its Accumulation and Activity in Endosomes","year":2013,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Medical Research Council; Cancer Research UK; Wellcome Trust","keywords":"Furin; TLR7; Proprotein Convertases; Endosome; Biology; Endocytic cycle; Cell biology; Immune system; Toll-like receptor; Receptor; Proprotein convertase; Endocytosis; Immunology; Innate immune system; Biochemistry; LDL receptor; Enzyme","score_opus":0.03371573637868072,"score_gpt":0.29621276310566536,"score_spread":0.2624970267269846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988299037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914541,0.0018337308,0.0049742,0.000290259,0.000049844402,0.000026201207,0.00038176504,0.000067548244,0.00092237967],"genre_scores_gemma":[0.99379563,0.0004046806,0.0027494805,0.000071090166,0.000015074474,0.000016590417,0.0009924392,0.00004217621,0.0019129138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968696,0.00005726425,0.0000357476,0.000044291588,0.00006879,0.0001069381],"domain_scores_gemma":[0.999496,0.000098823766,0.00013166721,0.000067878296,0.00011635516,0.00008928707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003649481,0.00029035428,0.00033315137,0.00024673672,0.00033589345,0.0008165182,0.00020522613,0.00047670782,0.001075674],"category_scores_gemma":[0.0004850534,0.00033040336,0.0005431843,0.00011342804,0.00024654905,0.00066402066,0.0004130585,0.00076717616,0.0011350985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020836378,0.000011529948,0.00031558212,0.000019346226,0.000005867529,0.00013203206,0.000014765772,0.000034953664,0.9983885,0.00022010833,0.000061837345,0.0005871031],"study_design_scores_gemma":[0.00001527445,0.00004629787,0.010497303,0.000005932715,0.000010726255,0.0006488256,0.000067824745,0.0009995969,0.98580974,0.00014902338,0.0017433253,0.0000062157533],"about_ca_topic_score_codex":0.0007577647,"about_ca_topic_score_gemma":0.0007369193,"teacher_disagreement_score":0.001075674,"about_ca_system_score_codex":0.0008765265,"about_ca_system_score_gemma":0.0004060113,"threshold_uncertainty_score":0.0063596964},"labels":[],"label_agreement":null},{"id":"W1988534109","doi":"10.1165/rcmb.2010-0292oc","title":"Interleukin-1 Receptor–Associated Kinase 3 Gene Associates with Susceptibility to Acute Lung Injury","year":2011,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute","keywords":"Gene; Receptor; Medicine; Kinase; Biology; Internal medicine; Genetics","score_opus":0.006192774632888579,"score_gpt":0.23529047962537358,"score_spread":0.229097704992485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988534109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818087,0.0004230154,0.0006768849,0.00014977051,0.00002095873,0.000009051875,0.0002461915,0.000013041277,0.00028031028],"genre_scores_gemma":[0.9988152,0.00014832438,0.0004312626,0.00007913833,0.000037601014,0.000011265683,0.00027204983,0.000006332935,0.00019889702],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99953675,0.00020136927,0.000045879926,0.00011875904,0.00005662649,0.000040633797],"domain_scores_gemma":[0.9985221,0.0004890885,0.000523926,0.00018672341,0.0001568988,0.00012117865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064458465,0.00040670685,0.00035376474,0.00036685387,0.00028766392,0.00032723002,0.0003478913,0.0005062391,0.0023145226],"category_scores_gemma":[0.0023101687,0.00016727031,0.0005845081,0.0007092742,0.00030102849,0.000121216064,0.0002215019,0.0007792688,0.00031502728],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002095901,0.000097244265,0.97746366,0.00005818139,0.00041728915,0.0006959746,0.00010956419,0.00027981692,0.012385012,0.00008994361,0.00052244164,0.0057849404],"study_design_scores_gemma":[0.00011526071,0.00015075658,0.9960517,0.000010256696,0.00018000128,0.0011088928,0.00006285938,0.00083157973,0.0008090481,0.00019965468,0.00047233887,0.00000769649],"about_ca_topic_score_codex":0.0016466822,"about_ca_topic_score_gemma":0.00094902224,"teacher_disagreement_score":0.0023145226,"about_ca_system_score_codex":0.00015382296,"about_ca_system_score_gemma":0.00023422377,"threshold_uncertainty_score":0.007742822},"labels":[],"label_agreement":null},{"id":"W1988886903","doi":"10.1038/418835a","title":"A block at the toll gate","year":2002,"lang":"en","type":"article","venue":"Nature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Toll; Inflammation; Immune system; Block (permutation group theory); Biology; Immunology; Mathematics","score_opus":0.006241095167600366,"score_gpt":0.21221816546986494,"score_spread":0.2059770703022646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988886903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4095773,0.12848228,0.10528654,0.08449359,0.018637674,0.00013313451,0.0013938514,0.0025425118,0.24945302],"genre_scores_gemma":[0.9313595,0.020863097,0.0071070134,0.006267899,0.0015521888,0.00006465805,0.00021274184,0.00015906252,0.032413803],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963164,0.000059093447,0.00001926997,0.000060368133,0.000115350434,0.0001142032],"domain_scores_gemma":[0.999585,0.00016191382,0.00005291564,0.000071070564,0.0000473872,0.0000817674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005872412,0.00040822173,0.00066028885,0.00031873348,0.0006493999,0.0017616886,0.00063627126,0.0012174108,0.010311676],"category_scores_gemma":[0.0008552908,0.00029956206,0.00038875834,0.00017021809,0.0012630625,0.003132756,0.0009860913,0.003470839,0.003098371],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001375113,0.00012672589,0.00058085244,0.0006149305,0.00006217127,0.0007614042,0.0002323862,0.001274122,0.36554143,0.5581146,0.014128198,0.057188038],"study_design_scores_gemma":[0.00029198098,0.0008095417,0.0023189688,0.00035185163,0.00010498141,0.0017706704,0.00033439696,0.0070272256,0.32405034,0.42508742,0.23775439,0.00009827961],"about_ca_topic_score_codex":0.00017990514,"about_ca_topic_score_gemma":0.00027623714,"teacher_disagreement_score":0.010311676,"about_ca_system_score_codex":0.00066143356,"about_ca_system_score_gemma":0.00052566174,"threshold_uncertainty_score":0.03449595},"labels":[],"label_agreement":null},{"id":"W1988962841","doi":"10.1016/s0165-2427(00)00231-2","title":"Lymphocyte subsets in porcine tonsillar crypt epithelium","year":2000,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Crypt; Biology; Epithelium; Intestinal epithelium; Cell biology; Genetics; Endocrinology","score_opus":0.009569497876016584,"score_gpt":0.22922279998733663,"score_spread":0.21965330211132006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1988962841","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99660045,0.00085732987,0.00021018379,0.000025332061,0.000010843293,0.000011879389,0.00011745531,0.000007742225,0.0021588109],"genre_scores_gemma":[0.9973387,0.00040331818,0.00019663021,0.00005301555,0.000011268346,0.000026009637,0.0002838036,0.0000039077554,0.0016832255],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999169,0.000013927256,0.000005423302,0.000020191776,0.0000109810935,0.000032629465],"domain_scores_gemma":[0.9999167,0.000021207481,0.000010041847,0.00000763208,0.0000142115905,0.000030256331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014106013,0.000146388,0.00013677304,0.00038392353,0.00026273332,0.00047215066,0.00013690587,0.0002598535,0.0021135279],"category_scores_gemma":[0.00015534885,0.00015484646,0.00015758346,0.00014077513,0.00023481634,0.000337027,0.0002199536,0.0003899442,0.00039769296],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003991367,0.000099416364,0.023215463,0.00017576982,0.000021181606,0.0010139323,0.0005231131,0.00011493632,0.9627849,0.00029637225,0.00015781709,0.0076056505],"study_design_scores_gemma":[0.0001597652,0.0032513263,0.7769291,0.00009633913,0.0001267636,0.0035518198,0.0042830175,0.0017159809,0.20332225,0.0004272942,0.006097833,0.00003861745],"about_ca_topic_score_codex":0.0011012255,"about_ca_topic_score_gemma":0.001132445,"teacher_disagreement_score":0.0021135279,"about_ca_system_score_codex":0.0002528259,"about_ca_system_score_gemma":0.00015678056,"threshold_uncertainty_score":0.007070422},"labels":[],"label_agreement":null},{"id":"W1989415522","doi":"10.1016/j.intimp.2011.03.024","title":"c-di-GMP protects against intranasal Acinetobacter baumannii infection in mice by chemokine induction and enhanced neutrophil recruitment","year":2011,"lang":"en","type":"article","venue":"International Immunopharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; National Research Council Canada; Institute for Biological Sciences","funders":"National Research Council Canada; Natural Sciences and Engineering Research Council of Canada; University of Ottawa","keywords":"Chemokine; Acinetobacter baumannii; Nasal administration; Microbiology; Medicine; Biology; Immunology; Immune system; Bacteria; Pseudomonas aeruginosa","score_opus":0.02979169027754913,"score_gpt":0.2769532863072462,"score_spread":0.24716159602969706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989415522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99328375,0.0020266946,0.0017339172,0.000494899,0.00021318841,0.00011469294,0.00049260113,0.00027297004,0.0013672943],"genre_scores_gemma":[0.9927458,0.0010801206,0.0025288505,0.00020052903,0.00007370497,0.00016698023,0.00034140103,0.000031965134,0.0028307135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969614,0.000050495903,0.000023181055,0.000049379632,0.000070392955,0.00011034401],"domain_scores_gemma":[0.999647,0.00002960445,0.00012639455,0.000045625184,0.000022348935,0.00012894094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029137978,0.0011249562,0.00044131852,0.00046942217,0.00026692846,0.0003356543,0.00047294842,0.0008010738,0.0012222723],"category_scores_gemma":[0.00023569269,0.0003330653,0.00032374685,0.00015646023,0.00068732165,0.0004681509,0.00024530236,0.0020095615,0.00035248045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020154666,0.0004434018,0.00019732246,0.00008217188,0.000010239009,0.00010137693,0.000019458375,0.00014566987,0.99358326,0.00011388336,0.00015223474,0.0031355373],"study_design_scores_gemma":[0.000564805,0.0056065847,0.007382892,0.00003485034,0.000056821103,0.00037927713,0.00007571686,0.0016293118,0.9819166,0.00020471375,0.0021294425,0.000018965264],"about_ca_topic_score_codex":0.0008759905,"about_ca_topic_score_gemma":0.0016778654,"teacher_disagreement_score":0.0012222723,"about_ca_system_score_codex":0.0004097465,"about_ca_system_score_gemma":0.00057689595,"threshold_uncertainty_score":0.0040889382},"labels":[],"label_agreement":null},{"id":"W1989511476","doi":"10.1002/ibd.21738","title":"Toll-like receptor 5 deficiency protects from wasting disease in a T cell transfer colitis model in T cell receptor-β-deficient mice","year":2011,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre; Child and Family Research Institute; BC Children's Hospital; McGill University; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"TLR5; Immunology; Inflammatory bowel disease; Flagellin; Colitis; T cell; Acquired immune system; Toll-like receptor; Receptor; Immune system; Innate immune system; Biology; Medicine; Disease; Internal medicine","score_opus":0.013342112848097292,"score_gpt":0.19982397713883973,"score_spread":0.18648186429074243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989511476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941332,0.001479331,0.0019848994,0.00013199772,0.000069400405,0.000089423556,0.00065378327,0.0002455758,0.0012124818],"genre_scores_gemma":[0.98918426,0.0011977395,0.0029457337,0.00018670435,0.000039141963,0.00015412389,0.0012919367,0.00010385767,0.004896492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963593,0.000049585895,0.00004899745,0.00010798934,0.00006291686,0.00009452661],"domain_scores_gemma":[0.9994473,0.000030051458,0.00022540313,0.00004936259,0.000033455897,0.00021439533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028837513,0.0011176713,0.0006116839,0.00085171085,0.00021664092,0.00040290272,0.00035212946,0.0007708766,0.0022574875],"category_scores_gemma":[0.00015646782,0.00038055205,0.0005096005,0.0002313295,0.000398278,0.00038142334,0.00020533378,0.0012543722,0.00070873124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094623497,0.00027840066,0.0003720642,0.00007032119,0.000017580165,0.00010406486,0.000017476024,0.00007116661,0.99673504,0.00005615093,0.00006362486,0.0012677738],"study_design_scores_gemma":[0.0006179279,0.010154506,0.016608644,0.00012698509,0.0002073371,0.001777835,0.00012884774,0.0019225207,0.96455216,0.00017872569,0.0036939566,0.000030576124],"about_ca_topic_score_codex":0.00025847618,"about_ca_topic_score_gemma":0.00030361474,"teacher_disagreement_score":0.0022574875,"about_ca_system_score_codex":0.00024282293,"about_ca_system_score_gemma":0.00023778487,"threshold_uncertainty_score":0.0075520873},"labels":[],"label_agreement":null},{"id":"W1989569828","doi":"10.1007/s10719-009-9239-8","title":"Dependence of pathogen molecule-induced Toll-like receptor activation and cell function on Neu1 sialidase","year":2009,"lang":"en","type":"article","venue":"Glycoconjugate Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":131,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Sialidase; Chemistry; Neuraminidase; Macrophage; Receptor; Molecular biology; Biology; Biochemistry; In vitro; Enzyme","score_opus":0.009675756818247548,"score_gpt":0.22277270579389083,"score_spread":0.21309694897564327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989569828","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99396306,0.0014826948,0.0007893047,0.000067031804,0.000020770633,0.000021003329,0.00044763106,0.00003103635,0.003177487],"genre_scores_gemma":[0.9964759,0.00046563408,0.00056716235,0.00003469129,0.000009275017,0.000028289778,0.00092344166,0.000011668677,0.001484074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996741,0.000090811176,0.000027484451,0.000027135715,0.0000531837,0.00012730311],"domain_scores_gemma":[0.9995962,0.00018663766,0.00003157932,0.000086057065,0.000043199063,0.000056260156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031040714,0.00036602348,0.0002487141,0.00022121657,0.00015347413,0.00039383813,0.0003411028,0.00027283607,0.0027998243],"category_scores_gemma":[0.000361157,0.00017928216,0.0002830302,0.0002121154,0.00034128333,0.0003795396,0.00034669306,0.00045933944,0.0007844174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016296294,0.000045929944,0.00035541752,0.000044290064,0.0000055803894,0.000100993515,0.000021428266,0.00004374431,0.99592716,0.00041226126,0.0000464182,0.0013671925],"study_design_scores_gemma":[0.00002861072,0.00028240302,0.0154481325,0.000008758792,0.000011873474,0.000317355,0.000035680347,0.0005418072,0.982139,0.00013540816,0.0010461156,0.000004939825],"about_ca_topic_score_codex":0.0005748653,"about_ca_topic_score_gemma":0.0007107733,"teacher_disagreement_score":0.0027998243,"about_ca_system_score_codex":0.00040179637,"about_ca_system_score_gemma":0.0002871162,"threshold_uncertainty_score":0.009366393},"labels":[],"label_agreement":null},{"id":"W1989589839","doi":"10.1111/j.1432-1033.2004.04433.x","title":"The structure and biological characteristics of the <i>Spirochaeta aurantia</i> outer membrane glycolipid LGL<sub>B</sub>","year":2004,"lang":"en","type":"article","venue":"European Journal of Biochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Institute for Biological Sciences","funders":"Natural Sciences and Engineering Research Council of Canada; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Glycolipid; Residue (chemistry); Bacterial outer membrane; Lipopolysaccharide; Chemistry; Chromatography; Lipid A; Lysis; Monosaccharide; Molecular mass; Biochemistry; Rhamnose; Mass spectrometry; Limulus; Biology; Polysaccharide; Escherichia coli","score_opus":0.0050897186564509405,"score_gpt":0.17896403045375658,"score_spread":0.17387431179730564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989589839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99743843,0.0007994782,0.00066602917,0.00005536775,0.0000060862803,0.000006179332,0.00041786258,0.000014517007,0.00059602916],"genre_scores_gemma":[0.9968899,0.00042399965,0.00087832025,0.000045641453,0.000011207781,0.0000075864286,0.0010602766,0.0000056198687,0.000677493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995244,0.0000089993555,0.000003878959,0.000012443082,0.00000926204,0.000012899983],"domain_scores_gemma":[0.9998436,0.000018686615,0.000065665765,0.000011804106,0.000029096409,0.00003117837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073321724,0.00035651948,0.00009538862,0.0002657231,0.00011696919,0.00024584905,0.0001321827,0.00030376733,0.00038191833],"category_scores_gemma":[0.00014627652,0.00009159937,0.00015094691,0.00022963322,0.00019250078,0.00016534679,0.00011783815,0.0002149482,0.0002779464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006824075,0.000007841114,0.0012120858,0.000021574346,0.0000017632321,0.000046794983,0.000014805363,0.000021788435,0.99770206,0.000017689292,0.000008938971,0.00087637606],"study_design_scores_gemma":[0.000017031241,0.00087999104,0.17656557,0.000019084147,0.000042921034,0.0011643065,0.00015750881,0.00070331845,0.81573737,0.00018081463,0.004515825,0.000016369197],"about_ca_topic_score_codex":0.00056829606,"about_ca_topic_score_gemma":0.00029519145,"teacher_disagreement_score":0.00056829606,"about_ca_system_score_codex":0.00014762323,"about_ca_system_score_gemma":0.000120833516,"threshold_uncertainty_score":0.0012776256},"labels":[],"label_agreement":null},{"id":"W1989668607","doi":"10.1002/eji.200737130","title":"Differential impact of the transcriptional repressor Gfi1 on mature CD4<sup>+</sup> and CD8<sup>+</sup> T lymphocyte function","year":2007,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Biology; Repressor; Function (biology); CD8; Molecular biology; Genetics; Transcription factor; Gene; Antigen","score_opus":0.008730071304903811,"score_gpt":0.21901264656315853,"score_spread":0.21028257525825472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989668607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728346,0.0013405785,0.000509049,0.000049986833,0.000005934524,0.0000033727135,0.00019260959,0.000040279632,0.0005746869],"genre_scores_gemma":[0.99728465,0.00036760248,0.00067562715,0.000033334258,0.0000067985766,0.000008372486,0.00049873523,0.000025679397,0.0010992389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998361,0.000018880293,0.000010184281,0.000028465416,0.00004048538,0.00006593592],"domain_scores_gemma":[0.99973077,0.000068317844,0.00006974015,0.000022804445,0.000023570352,0.0000848195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014329252,0.0003120557,0.0002931405,0.00020438993,0.00010032187,0.00041077437,0.00027733546,0.00021598382,0.001086276],"category_scores_gemma":[0.00024022382,0.0001350829,0.0001387205,0.00010109021,0.00028805144,0.00020398459,0.00028615072,0.00048158586,0.00035075663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015464397,0.000005218423,0.00022843265,0.000015609465,0.000001416994,0.000021442494,0.0000062258678,0.000035255332,0.99887305,0.000045705132,0.000012843449,0.0006000563],"study_design_scores_gemma":[0.000011273138,0.00014822352,0.0055788546,0.000003975862,0.000010170919,0.00024393197,0.000024584033,0.0006799386,0.99231404,0.00003919603,0.00094241183,0.000003399581],"about_ca_topic_score_codex":0.0005492341,"about_ca_topic_score_gemma":0.00066063006,"teacher_disagreement_score":0.001086276,"about_ca_system_score_codex":0.00040659498,"about_ca_system_score_gemma":0.0001983222,"threshold_uncertainty_score":0.0036339164},"labels":[],"label_agreement":null},{"id":"W1989800894","doi":"10.1097/ccm.0000000000000407","title":"Muscle-Specific Inhibition of the Classical Nuclear Factor-κB Pathway Is Protective Against Diaphragmatic Weakness in Murine Endotoxemia","year":2014,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Christie (Canada); McGill University; Royal Military College Saint-Jean","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research","keywords":"Medicine; Weakness; Diaphragmatic breathing; Muscle weakness; Diaphragm (acoustics); Pharmacology; Internal medicine; Pathology; Anatomy","score_opus":0.011999563222226353,"score_gpt":0.23923732429114442,"score_spread":0.22723776106891808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1989800894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966537,0.0012847751,0.0013127396,0.00008451827,0.000033915247,0.00003696565,0.00023719747,0.000058780242,0.00029744933],"genre_scores_gemma":[0.9941255,0.0014151135,0.002137958,0.000086558866,0.000022631431,0.00013166603,0.0005001737,0.000022564749,0.0015577468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997149,0.00004471606,0.00003053386,0.0000682191,0.000067829606,0.00007386317],"domain_scores_gemma":[0.99960047,0.000023984276,0.0001776286,0.00003802241,0.00003102091,0.00012889868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037414822,0.00087342015,0.0004801386,0.00042267746,0.00016277614,0.00025244942,0.00028617063,0.00037129145,0.0013142595],"category_scores_gemma":[0.0001968405,0.00024323448,0.0003586937,0.0001975194,0.0005043323,0.00028796302,0.00022271661,0.0007575611,0.00026069797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000889278,0.00013232915,0.00028804337,0.000054840566,0.000009672635,0.000028658746,0.000008525136,0.000038910377,0.9978029,0.000025763455,0.000019242772,0.00070188096],"study_design_scores_gemma":[0.00027323794,0.007114856,0.017714182,0.00003739547,0.00006765404,0.0003743342,0.00006804401,0.0006523983,0.9727014,0.000062431536,0.00092441466,0.000009757239],"about_ca_topic_score_codex":0.00016220071,"about_ca_topic_score_gemma":0.00031449072,"teacher_disagreement_score":0.0013142595,"about_ca_system_score_codex":0.00023857925,"about_ca_system_score_gemma":0.00026532894,"threshold_uncertainty_score":0.0043966174},"labels":[],"label_agreement":null},{"id":"W1990035602","doi":"10.1016/j.coi.2007.07.001","title":"Alternative mechanisms of immune receptor diversity","year":2007,"lang":"en","type":"review","venue":"Current Opinion in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Moffitt Cancer Center; National Institutes of Health; Cancer Research Institute","keywords":"Biology; Immune system; Immune receptor; Acquired immune system; Receptor; Germline; Innate immune system; Pattern recognition receptor; Immunity; Alternative splicing; Somatic cell; Genetics; Gene; Evolutionary biology; Immunology; Exon","score_opus":0.09307811915011453,"score_gpt":0.36403960040137706,"score_spread":0.2709614812512625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990035602","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00055178197,0.98672116,0.0039737164,0.0021054165,0.0028583582,0.000010313607,0.000024105393,0.000041172916,0.003713903],"genre_scores_gemma":[0.0038591728,0.98535746,0.0023942583,0.0016087963,0.0032279487,0.000032610606,0.000080778256,0.000009015965,0.0034299276],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994881,0.000091116955,0.000050729603,0.000117031195,0.00017501923,0.000077928584],"domain_scores_gemma":[0.9995441,0.00020318676,0.00004539784,0.000032999014,0.000120215875,0.000054082648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018090543,0.00135021,0.0026597017,0.0011880271,0.0004810606,0.0030255069,0.0030710136,0.0030071824,0.0033984545],"category_scores_gemma":[0.00091865653,0.0005618007,0.00062043086,0.0011181489,0.0027010837,0.0051441626,0.0019286895,0.0052931355,0.0027114088],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029710573,0.00008545488,0.00030630454,0.006791883,0.00013000537,0.0010458151,0.00019065336,0.0010034991,0.020548845,0.073197134,0.044704314,0.851699],"study_design_scores_gemma":[0.000052455776,0.00008307039,0.00047399403,0.0008195567,0.000070600094,0.002459429,0.00013242719,0.0003980619,0.0024555968,0.029833257,0.96317136,0.000050321494],"about_ca_topic_score_codex":0.00031832562,"about_ca_topic_score_gemma":0.00048340144,"teacher_disagreement_score":0.0033984545,"about_ca_system_score_codex":0.0010818755,"about_ca_system_score_gemma":0.0007378855,"threshold_uncertainty_score":0.01136893},"labels":[],"label_agreement":null},{"id":"W1990113015","doi":"10.1038/sj.onc.1210905","title":"Obstacles to effective Toll-like receptor agonist therapy for hematologic malignancies","year":2008,"lang":"en","type":"review","venue":"Oncogene","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; McMaster University; Women's College Hospital; Sunnybrook Health Science Centre","funders":"National Cancer Institute; Canadian Institutes of Health Research; Ontario Institute for Cancer Research","keywords":"Biology; Agonist; Toll-like receptor; Immunology; Cancer research; Receptor; Toll; Genetics; Innate immune system","score_opus":0.03659042382537198,"score_gpt":0.314420928491998,"score_spread":0.277830504666626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990113015","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010423357,0.99758196,0.00022393056,0.00084610714,0.00039195787,0.0000029990206,0.0000064605547,0.000007656165,0.0008346948],"genre_scores_gemma":[0.00076351676,0.9963348,0.0003427892,0.00073344173,0.0006763871,0.000007745004,0.000018227676,0.0000023694274,0.0011207488],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976665,0.000046685935,0.000033377346,0.00003681901,0.00009178582,0.000024657826],"domain_scores_gemma":[0.99956566,0.00024682877,0.000041912634,0.0000115632865,0.000096980024,0.000037031674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011597018,0.0008149155,0.0016317058,0.000982621,0.00036517272,0.0012071662,0.00091023464,0.0016006237,0.0030600082],"category_scores_gemma":[0.0009267591,0.00027973505,0.00036950526,0.00089643436,0.0008149182,0.0015647104,0.00065807684,0.0033960813,0.0023220167],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011510766,0.000073112125,0.00012898777,0.0042230883,0.000038865197,0.00024317937,0.000031145544,0.0003372589,0.0017361877,0.0046166335,0.04572496,0.94273144],"study_design_scores_gemma":[0.0000520456,0.0001199869,0.00044959062,0.0017833178,0.000087607834,0.0017284525,0.000054792425,0.00013163463,0.0006100322,0.0023778353,0.9925925,0.000012106765],"about_ca_topic_score_codex":0.000613049,"about_ca_topic_score_gemma":0.0020268317,"teacher_disagreement_score":0.0030600082,"about_ca_system_score_codex":0.0006601718,"about_ca_system_score_gemma":0.00091625476,"threshold_uncertainty_score":0.01023674},"labels":[],"label_agreement":null},{"id":"W1990131619","doi":"10.1016/j.rvsc.2013.06.025","title":"Characterization of responses initiated by different Toll-like receptor 2 ligands in chicken spleen cells","year":2013,"lang":"en","type":"article","venue":"Research in Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"TLR2; Cytokine; Toll-like receptor; Splenocyte; Receptor; Biology; Cell biology; Stimulation; Peptidoglycan; TLR4; Immune system; Immunology; Chemistry; Signal transduction; Gene; Innate immune system; Biochemistry; Endocrinology","score_opus":0.07285542805100048,"score_gpt":0.34565712380813834,"score_spread":0.27280169575713786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990131619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99648535,0.0006718444,0.0008625053,0.00003887175,0.000016668158,0.000034458495,0.00042018516,0.000013076053,0.0014571236],"genre_scores_gemma":[0.99457574,0.00048294902,0.0012583433,0.00009668491,0.00002512504,0.00009956213,0.0012059789,0.000009750033,0.002245794],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99984324,0.00003196504,0.000018861461,0.000032639447,0.000023550467,0.000049665567],"domain_scores_gemma":[0.99986863,0.00004028192,0.000014848371,0.00001862183,0.000028438773,0.000029041496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015767288,0.00031664,0.00021244328,0.0003488779,0.00020552988,0.00032381905,0.00013290158,0.00027315752,0.0013754874],"category_scores_gemma":[0.000116535,0.0001250417,0.00030638938,0.00020052216,0.00016244293,0.00023207754,0.00019392226,0.00059828034,0.0005400718],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017181957,0.000014530461,0.00042723533,0.000020584328,0.0000018428468,0.00004539858,0.000028731136,0.000018332665,0.9988943,0.000037751095,0.000009951796,0.00032960097],"study_design_scores_gemma":[0.0000852349,0.001104481,0.071807735,0.0000228042,0.00006127833,0.0005293781,0.0006757264,0.0010064752,0.9214879,0.00011794272,0.0030879783,0.000012914587],"about_ca_topic_score_codex":0.0004806737,"about_ca_topic_score_gemma":0.0006359466,"teacher_disagreement_score":0.0013754874,"about_ca_system_score_codex":0.00019178043,"about_ca_system_score_gemma":0.0001442878,"threshold_uncertainty_score":0.0046014786},"labels":[],"label_agreement":null},{"id":"W1990485538","doi":"10.1016/j.vaccine.2009.01.117","title":"CpG oligonucleotide, host defense peptide and polyphosphazene act synergistically, inducing long-lasting, balanced immune responses in cattle","year":2009,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Canadian Institutes of Health Research; Krembil Foundation; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Adjuvant; CpG Oligodeoxynucleotide; Immune system; Immunogenicity; Antigen; Biology; Immunopotentiator; Secretion; Immunology; Innate immune system; Biochemistry","score_opus":0.008020865914375864,"score_gpt":0.23634245174234075,"score_spread":0.22832158582796488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990485538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968382,0.0013844841,0.0009566547,0.000076961085,0.000047556274,0.000029261657,0.00007736472,0.000017328428,0.00057225936],"genre_scores_gemma":[0.9957326,0.000841626,0.0013838088,0.000068931135,0.00004042799,0.000052700947,0.00018221186,0.000010574452,0.0016871219],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993704,0.00015708795,0.000042291467,0.00011983948,0.00011583061,0.00019459343],"domain_scores_gemma":[0.99966276,0.00011822783,0.00006973939,0.000019060999,0.000033844557,0.00009641848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076970906,0.0005505615,0.0005364538,0.0005251687,0.00022719863,0.0004383635,0.0003288914,0.00066809944,0.0007697773],"category_scores_gemma":[0.00043259145,0.0002873046,0.00028797783,0.00016915669,0.0004659935,0.00039772538,0.00025130753,0.00077319145,0.00022432311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013918579,0.00022344531,0.00054246624,0.000093847506,0.000015818925,0.000065853754,0.000039675095,0.00017689707,0.99410725,0.0000858208,0.000043711043,0.0032134682],"study_design_scores_gemma":[0.00030699748,0.013567154,0.009325268,0.000037055393,0.00014292334,0.0005073194,0.0001646728,0.0013959302,0.9714966,0.000214932,0.0028276527,0.000013478317],"about_ca_topic_score_codex":0.0010347241,"about_ca_topic_score_gemma":0.0014256862,"teacher_disagreement_score":0.0010347241,"about_ca_system_score_codex":0.0005034244,"about_ca_system_score_gemma":0.00044476942,"threshold_uncertainty_score":0.0040706396},"labels":[],"label_agreement":null},{"id":"W1990616799","doi":"10.1016/s0198-8859(01)00221-x","title":"Identification of four novel dinucleotide repeat polymorphisms in the IL-2 and IL-2β receptor genes","year":2001,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Allele; Gene; Genetics; Biology; Rheumatoid arthritis; Receptor; Polymorphism (computer science); Immunology","score_opus":0.021181543166515448,"score_gpt":0.24346386756997426,"score_spread":0.22228232440345883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990616799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99813133,0.00024775846,0.000989254,0.00007909991,0.000027342716,0.000014425208,0.00014520714,0.000010186618,0.00035543894],"genre_scores_gemma":[0.9974847,0.000105085324,0.0013248839,0.00010571184,0.000028820548,0.000022021452,0.00022964439,0.000008911797,0.0006902731],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99969935,0.0000694021,0.000030727966,0.00009573847,0.000053221167,0.000051528754],"domain_scores_gemma":[0.99947804,0.00021958683,0.00014239598,0.000037838414,0.000044257635,0.00007797746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002179256,0.0005503152,0.00034070044,0.00061954686,0.00023493012,0.0003351459,0.00031873013,0.00068422226,0.0014916095],"category_scores_gemma":[0.0007687517,0.00018158718,0.00037977862,0.0002844211,0.00031370376,0.00010648186,0.00020917307,0.0006230575,0.00022223023],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031741215,0.0003393332,0.1267199,0.00007858483,0.0002667323,0.007723991,0.0004818374,0.00039868976,0.84288174,0.00074170856,0.00031093802,0.016882267],"study_design_scores_gemma":[0.00053488236,0.0018111662,0.8587519,0.000081080114,0.0005101574,0.03940808,0.00056256074,0.002727389,0.08854359,0.0011377166,0.005835556,0.000095901596],"about_ca_topic_score_codex":0.0009290299,"about_ca_topic_score_gemma":0.0010281556,"teacher_disagreement_score":0.0014916095,"about_ca_system_score_codex":0.00021311562,"about_ca_system_score_gemma":0.00017889454,"threshold_uncertainty_score":0.004989922},"labels":[],"label_agreement":null},{"id":"W1990834285","doi":"10.1182/blood-2003-02-0660","title":"Protection from endotoxemia by adenoviral-mediated gene transfer of human bactericidal/permeability-increasing protein","year":2003,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Lipopolysaccharide; In vivo; Tumor necrosis factor alpha; Proinflammatory cytokine; Cytokine; Genetic enhancement; Transgene; Biology; Sepsis; Immunology; Pharmacology; Inflammation; Gene; Biochemistry","score_opus":0.008647960250619499,"score_gpt":0.19936721974511476,"score_spread":0.19071925949449525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990834285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9659502,0.011111201,0.019046377,0.00051466556,0.00018406623,0.00012243658,0.0002811553,0.00035585184,0.002434205],"genre_scores_gemma":[0.9853468,0.005014778,0.0071742875,0.00012250959,0.00006411699,0.000066063636,0.00038645376,0.00002021741,0.0018047538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990916,0.000022943117,0.000007020222,0.00002170881,0.000018004688,0.000021119002],"domain_scores_gemma":[0.9999317,0.000018760116,0.000022099655,0.000010033506,0.0000039266606,0.000013472389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021308658,0.0004418793,0.00021926784,0.00013226112,0.00008150479,0.00031062204,0.00017930573,0.00026065746,0.0010077731],"category_scores_gemma":[0.0001471823,0.000086081476,0.00016781988,0.000104361,0.0004283863,0.00023186232,0.00016004372,0.00077916816,0.00022211458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003419704,0.00010830616,0.00014700826,0.00008230341,0.000008742628,0.000054828295,0.00001865857,0.00008454786,0.9906069,0.00032378247,0.000090368056,0.008132516],"study_design_scores_gemma":[0.00019801357,0.0031109557,0.0032714878,0.000018209264,0.000039495975,0.0007132229,0.00002541707,0.001180642,0.98480356,0.00027270446,0.0063571986,0.000009059849],"about_ca_topic_score_codex":0.00017947046,"about_ca_topic_score_gemma":0.00010561744,"teacher_disagreement_score":0.0010077731,"about_ca_system_score_codex":0.00016445653,"about_ca_system_score_gemma":0.00025867095,"threshold_uncertainty_score":0.0033712983},"labels":[],"label_agreement":null},{"id":"W1990944646","doi":"10.1016/s0165-2427(00)00164-1","title":"Cytokine mRNA expression in leukocytes of efferent lymph from stimulated lymph nodes in pigs","year":2000,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cytokine; Lipopolysaccharide; Tumor necrosis factor alpha; Biology; Lymph; Interferon gamma; Immunology; Interleukin; Molecular biology; Messenger RNA; Medicine; Pathology; Biochemistry","score_opus":0.012050882732960648,"score_gpt":0.2386807200460106,"score_spread":0.22662983731304995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990944646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996872,0.00076949643,0.00045050442,0.000041818585,0.000026904645,0.000019458337,0.0006337836,0.000011852566,0.001174224],"genre_scores_gemma":[0.9903015,0.0013269756,0.0010703753,0.0002219995,0.00008184479,0.00020042063,0.001870347,0.000018436771,0.00490819],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998338,0.000025170488,0.000013746382,0.000044086693,0.000018541597,0.00006463253],"domain_scores_gemma":[0.9996748,0.00015650557,0.00003844031,0.000022309734,0.000046196077,0.00006171587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020611842,0.00033293897,0.0003613745,0.0005142951,0.00032428466,0.0005403944,0.00013613989,0.0005542651,0.0014724237],"category_scores_gemma":[0.00031898427,0.00030702274,0.0003552052,0.0002441667,0.00040957236,0.00036780565,0.00022395745,0.0006504758,0.0005605686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022678094,0.00004785823,0.0054159784,0.00013447233,0.000014656053,0.00040656808,0.00019013455,0.000046390564,0.9898289,0.00005912685,0.00005057204,0.001537563],"study_design_scores_gemma":[0.00028685702,0.0036417402,0.48310292,0.00009439399,0.00024497998,0.0018874137,0.0017496956,0.0007160898,0.50520366,0.00028951574,0.0027485143,0.00003420805],"about_ca_topic_score_codex":0.00048571223,"about_ca_topic_score_gemma":0.0005485804,"teacher_disagreement_score":0.0014724237,"about_ca_system_score_codex":0.00021829928,"about_ca_system_score_gemma":0.00026218782,"threshold_uncertainty_score":0.004925728},"labels":[],"label_agreement":null},{"id":"W1991338336","doi":"10.1038/cddis.2013.161","title":"A critical role of toll-like receptor 4 (TLR4) and its’ in vivo ligands in basal radio-resistance","year":2013,"lang":"en","type":"article","venue":"Cell Death and Disease","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Atomic Energy (Canada)","funders":"National Natural Science Foundation of China","keywords":"Cell biology; Toll-like receptor; In vivo; Basal (medicine); TLR4; Receptor; Toll; Biology; Signal transduction; Chemistry; Immunology; Innate immune system; Biochemistry; Genetics; Endocrinology","score_opus":0.004343780641449299,"score_gpt":0.2053887655914067,"score_spread":0.2010449849499574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991338336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9883791,0.003787314,0.005949196,0.00024477713,0.000045768888,0.000022068569,0.00019707899,0.000117939875,0.0012566595],"genre_scores_gemma":[0.9933704,0.0009304958,0.0027091461,0.00009665702,0.000020133115,0.00006908517,0.00042129005,0.000029202218,0.0023536247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963796,0.00011265359,0.000041181138,0.000061005314,0.000051135245,0.00009603068],"domain_scores_gemma":[0.99960655,0.000056264606,0.00015521205,0.000049220253,0.000036741214,0.00009605881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000359654,0.00050769513,0.0004213405,0.00027308826,0.00016372536,0.0004444867,0.00039313722,0.0006338635,0.0026824013],"category_scores_gemma":[0.00033229493,0.0002695614,0.00035137247,0.00008449565,0.0003792533,0.0005196906,0.00047881916,0.0007939481,0.0006707976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044160263,0.00003960639,0.0006125677,0.00005533101,0.000005715525,0.000057728943,0.000009992991,0.000066529814,0.99731284,0.000119535616,0.000037929603,0.0012406349],"study_design_scores_gemma":[0.00003271753,0.0010639107,0.011182274,0.000018234045,0.00005477781,0.00055951695,0.000056091536,0.0005903362,0.9846608,0.0001662167,0.001606514,0.000008554728],"about_ca_topic_score_codex":0.00007956527,"about_ca_topic_score_gemma":0.00006141864,"teacher_disagreement_score":0.0026824013,"about_ca_system_score_codex":0.00024867046,"about_ca_system_score_gemma":0.00018511557,"threshold_uncertainty_score":0.008973479},"labels":[],"label_agreement":null},{"id":"W1991399380","doi":"10.1111/j.1365-2567.2008.02840.x","title":"CD14 contributes to pulmonary inflammation and mortality during murine tuberculosis","year":2008,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"CD14; Inflammation; Tuberculosis; Lung; Biology; Immunology; Mycobacterium tuberculosis; Microbiology; Innate immune system; Virulence; Medicine; Pathology; Immune system; Internal medicine; Gene","score_opus":0.009592493121685588,"score_gpt":0.22636863223736883,"score_spread":0.21677613911568325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991399380","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976762,0.001292323,0.00038932066,0.000061199484,0.000012118925,0.00001159905,0.0000911348,0.000033101183,0.0004330216],"genre_scores_gemma":[0.9980118,0.0004898554,0.0002724986,0.000041433213,0.000019709372,0.000020759673,0.0001786326,0.000010685981,0.0009545161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996965,0.00005179638,0.00002627851,0.000050099374,0.00006651632,0.000108798275],"domain_scores_gemma":[0.99941564,0.000045803285,0.00022636344,0.000042897256,0.0000547507,0.00021449571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020803757,0.00047794543,0.00043370406,0.000494307,0.00022930045,0.00038055854,0.00016675133,0.0005527847,0.0008345128],"category_scores_gemma":[0.00026983523,0.0002991548,0.0001993469,0.00015476662,0.00033585148,0.0002183553,0.00038882246,0.00085507735,0.0003882652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014330028,0.00014781668,0.0066511896,0.00005423458,0.000010162823,0.00044797224,0.00004291045,0.000083665414,0.9875125,0.00006586411,0.00007361883,0.0034770449],"study_design_scores_gemma":[0.0002899531,0.004015465,0.33732432,0.00008723857,0.00020776948,0.0057463334,0.0002689801,0.0032741216,0.64493704,0.0004922138,0.0033273757,0.000029227618],"about_ca_topic_score_codex":0.00023259057,"about_ca_topic_score_gemma":0.00023052606,"teacher_disagreement_score":0.0008345128,"about_ca_system_score_codex":0.00028601463,"about_ca_system_score_gemma":0.00016498881,"threshold_uncertainty_score":0.0027917624},"labels":[],"label_agreement":null},{"id":"W1991722411","doi":"10.1016/j.jim.2011.01.009","title":"Variables to be controlled in the assessment of blood innate immune responses to Toll-like receptor stimulation","year":2011,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Canadian Institutes of Health Research; AllerGen; Women and Children's Health Research Institute; Burroughs Wellcome Fund; Michael Smith Health Research BC; Child and Family Research Institute; Wellcome Trust","keywords":"Innate immune system; Toll-like receptor; Toll; Immunology; Immune system; Biology; Procurement; Sample (material); Computational biology; Business; Chemistry; Marketing","score_opus":0.06521879697112117,"score_gpt":0.3760624896913478,"score_spread":0.31084369272022666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991722411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95251703,0.0022434455,0.040604353,0.00017582299,0.0005274292,0.00082214386,0.0008625785,0.0001603313,0.0020869225],"genre_scores_gemma":[0.9408606,0.0011118789,0.04731378,0.00045211328,0.00019318519,0.0041909064,0.0017056997,0.00018765962,0.0039842455],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99752814,0.00072491774,0.00021028999,0.0004454642,0.00076260103,0.00032867026],"domain_scores_gemma":[0.9981674,0.00085046573,0.00029920394,0.00031712736,0.0002595788,0.00010609982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002593392,0.0007467655,0.00079461525,0.000463086,0.00061803235,0.0012774756,0.0005165472,0.00060144457,0.00209666],"category_scores_gemma":[0.003949464,0.0002514897,0.00040510143,0.0008661588,0.00096351566,0.00045324359,0.0003983469,0.0012032992,0.00034749403],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020859698,0.0022866277,0.035105422,0.00037515265,0.00016167384,0.00022184433,0.00041068846,0.0016119152,0.87820125,0.0021568676,0.0009978957,0.057610944],"study_design_scores_gemma":[0.0005862797,0.0049696527,0.08379012,0.000075042306,0.0003338846,0.00021995368,0.00020407817,0.0045508016,0.896631,0.0009185852,0.007659065,0.00006155693],"about_ca_topic_score_codex":0.0012357356,"about_ca_topic_score_gemma":0.0014598089,"teacher_disagreement_score":0.002593392,"about_ca_system_score_codex":0.0005231004,"about_ca_system_score_gemma":0.0013947801,"threshold_uncertainty_score":0.013715386},"labels":[],"label_agreement":null},{"id":"W1991808732","doi":"10.1016/j.molimm.2009.04.022","title":"A function for AAMP in Nod2-mediated NF-κB activation","year":2009,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Agence des Aires Marines Protégées; Deutsche Forschungsgemeinschaft; Federation of European Biochemical Societies","keywords":"NOD2; HEK 293 cells; Biology; Innate immune system; Cell biology; Cell culture; Cytosol; Function (biology); Molecular biology; Biochemistry; Receptor; Genetics; Enzyme","score_opus":0.005456800463870177,"score_gpt":0.21813551377776905,"score_spread":0.21267871331389887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991808732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83646494,0.048042312,0.086183764,0.0037654075,0.0026360676,0.00026513397,0.0028570015,0.0011736612,0.018611796],"genre_scores_gemma":[0.9556151,0.005532028,0.025974387,0.00040220172,0.00040483815,0.00017252112,0.0013519815,0.00005813103,0.010488788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997454,0.0000449972,0.000027795671,0.000058626774,0.00005378674,0.000069412585],"domain_scores_gemma":[0.9996847,0.000040931765,0.00004310457,0.000059776146,0.00006548623,0.00010593176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004909053,0.0009742879,0.00041213733,0.0004559876,0.00079489854,0.0011257902,0.00054778723,0.0010598238,0.0028243016],"category_scores_gemma":[0.0004819533,0.00020953218,0.00068967167,0.00023483626,0.00056239864,0.0014672462,0.00085434807,0.0014677899,0.0012828283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012437684,0.000080685204,0.00044008074,0.00031806034,0.00002112447,0.001205762,0.00004734512,0.00014697335,0.9847247,0.0034683896,0.0005112438,0.007791974],"study_design_scores_gemma":[0.00014661987,0.00058801234,0.0063329604,0.000092159455,0.0000388848,0.0059612636,0.0001595796,0.001981204,0.95634764,0.0036912435,0.024625804,0.000034572913],"about_ca_topic_score_codex":0.00024806213,"about_ca_topic_score_gemma":0.00013445591,"teacher_disagreement_score":0.0028243016,"about_ca_system_score_codex":0.00043147028,"about_ca_system_score_gemma":0.0003067144,"threshold_uncertainty_score":0.00944823},"labels":[],"label_agreement":null},{"id":"W1992373328","doi":"10.1189/jlb.0610357","title":"TLR engagement prior to virus infection influences MHC-I antigen presentation in an epitope-dependent manner as a result of nitric oxide release","year":2010,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Regional Cancer Foundation; University of Ottawa; Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; TLR3; Epitope; TLR2; Innate immune system; Antigen presentation; Antigen; Immunology; TLR4; Acquired immune system; Cross-presentation; Toll-like receptor; Immune system; Major histocompatibility complex; MHC class I; T cell","score_opus":0.01852108292255315,"score_gpt":0.31808560872958214,"score_spread":0.29956452580702897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992373328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99670285,0.00086673565,0.0015008898,0.000046657344,0.00003595834,0.000014572386,0.0000580505,0.000012838763,0.000761356],"genre_scores_gemma":[0.99732286,0.0003783865,0.0013217982,0.000028314256,0.000015835956,0.000023734665,0.00009724291,0.0000045765537,0.00080722413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996333,0.00009751849,0.000025227195,0.00006808278,0.00007715701,0.00009874671],"domain_scores_gemma":[0.99979573,0.00008391115,0.000034404376,0.000026381516,0.000019393254,0.000040113457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027058233,0.0002642633,0.00024789778,0.00009750625,0.00011535269,0.00037242725,0.00015420993,0.0002790776,0.0012040358],"category_scores_gemma":[0.00033286566,0.00012118117,0.00022002659,0.00006943114,0.00023652676,0.00023461314,0.00026711228,0.00063399615,0.00023481679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020137495,0.000030012894,0.000239884,0.000025405358,0.0000039431025,0.000039229548,0.000007478241,0.000024230103,0.99867505,0.000029571434,0.000008297441,0.0007156704],"study_design_scores_gemma":[0.000018069144,0.0005166652,0.0045665093,0.000007483993,0.000016498856,0.00020735084,0.000026040345,0.0007038622,0.9933247,0.000056399585,0.00055295904,0.0000034195634],"about_ca_topic_score_codex":0.00018924335,"about_ca_topic_score_gemma":0.0003430108,"teacher_disagreement_score":0.0012040358,"about_ca_system_score_codex":0.00020343009,"about_ca_system_score_gemma":0.00014999235,"threshold_uncertainty_score":0.004027903},"labels":[],"label_agreement":null},{"id":"W1992542859","doi":"10.1038/nrmicro2745","title":"Modulating immunity as a therapy for bacterial infections","year":2012,"lang":"en","type":"review","venue":"Nature Reviews Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":538,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University; University of British Columbia","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Innate immune system; Antimicrobial; Biology; Immunity; Antibiotic resistance; Antibiotics; Immune system; Immunology; Antimicrobial peptides; Pattern recognition receptor; Microbiology","score_opus":0.04464169390145939,"score_gpt":0.3521310262793412,"score_spread":0.3074893323778818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992542859","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008557186,0.9975746,0.0002750231,0.00036607427,0.00086112955,0.000007841001,0.000014644814,0.000012445854,0.0008026062],"genre_scores_gemma":[0.00077365,0.9964611,0.00037072937,0.00052772654,0.00080230617,0.000014835002,0.000028597968,0.0000032972878,0.0010178197],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978167,0.000036990295,0.000029216333,0.000033309036,0.000093512506,0.00002530395],"domain_scores_gemma":[0.99964786,0.00016411762,0.00004311264,0.000011676899,0.00008561071,0.000047657762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079654466,0.0016829267,0.00196301,0.0017439746,0.00026873228,0.0010520883,0.0009790988,0.0017535449,0.0028391045],"category_scores_gemma":[0.00092786225,0.00036151768,0.00044047585,0.0013345134,0.0007419844,0.0014419209,0.0008129958,0.00366639,0.0021947997],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015394937,0.00011949043,0.00007890149,0.007221158,0.00006607906,0.00017169872,0.000027402348,0.00035410715,0.0028245433,0.0027146172,0.05574473,0.9305234],"study_design_scores_gemma":[0.00009059459,0.00015218009,0.00041949024,0.0020917642,0.00014863217,0.0009696592,0.00003546406,0.00017738932,0.00068374345,0.0021918071,0.99301827,0.000020963642],"about_ca_topic_score_codex":0.00059076224,"about_ca_topic_score_gemma":0.0016769535,"teacher_disagreement_score":0.0028391045,"about_ca_system_score_codex":0.00048635644,"about_ca_system_score_gemma":0.0007818103,"threshold_uncertainty_score":0.009497821},"labels":[],"label_agreement":null},{"id":"W1992645970","doi":"10.1016/j.molimm.2008.09.024","title":"Characterization of bovine Toll-like receptor 8: Ligand specificity, signaling essential sites and dimerization","year":2008,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"","keywords":"Ectodomain; Biology; Transmembrane domain; Receptor; Transmembrane protein; Mutant; Transfection; Glycosylation; Cell biology; Signal transduction; Mutagenesis; Molecular biology; Biochemistry; Gene","score_opus":0.006986437595430114,"score_gpt":0.20125700760796078,"score_spread":0.19427057001253067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992645970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930442,0.0009919645,0.0040197787,0.00013357846,0.000016037542,0.000021053025,0.0005773615,0.000028438084,0.0011675359],"genre_scores_gemma":[0.9899288,0.00044027442,0.004159214,0.00009399918,0.000011878411,0.000020031417,0.0030467922,0.000018901192,0.002280166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999025,0.000024828467,0.000007122489,0.000020136255,0.00001683985,0.000028578479],"domain_scores_gemma":[0.99984074,0.00004106508,0.000028887822,0.000019694993,0.000021971753,0.00004771717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017913213,0.00023832027,0.00016411206,0.00015033098,0.00017155879,0.00019657829,0.00031881157,0.0001920923,0.0014056026],"category_scores_gemma":[0.00026686766,0.00011844887,0.00017524374,0.0001313801,0.00012316229,0.00018911743,0.00012623312,0.00047865414,0.00073822035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009944863,0.000020009453,0.00023665348,0.000014331662,0.00000224821,0.00003234215,0.000017942928,0.000065641325,0.9987274,0.00013006666,0.0000424555,0.00061145274],"study_design_scores_gemma":[0.000030266772,0.00021490877,0.013413659,0.000009525678,0.000020711781,0.0009805317,0.00008270692,0.0030936399,0.9738254,0.00025984526,0.008059505,0.00000934516],"about_ca_topic_score_codex":0.0008521045,"about_ca_topic_score_gemma":0.00091318256,"teacher_disagreement_score":0.0014056026,"about_ca_system_score_codex":0.00033120663,"about_ca_system_score_gemma":0.00018273474,"threshold_uncertainty_score":0.0047022104},"labels":[],"label_agreement":null},{"id":"W1992867844","doi":"10.1016/j.humimm.2007.08.205","title":"182-P: A rapid automated method for the sequential isolation of CD19, CD3 and CD33 cells from one tube of whole blood","year":2007,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; Stemcell Technologies","funders":"","keywords":"CD19; Isolation (microbiology); CD33; Tube (container); CD3; Biology; Chromatography; Immunology; Chemistry; Materials science; Peripheral blood; Antigen; Cell biology; Bioinformatics","score_opus":0.018154664253322884,"score_gpt":0.279294901087808,"score_spread":0.2611402368344851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992867844","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.043201335,0.003598614,0.9064291,0.0006742052,0.00060205895,0.0033893993,0.005817733,0.021776926,0.014510499],"genre_scores_gemma":[0.06543796,0.0024831325,0.877999,0.0014096953,0.00035844356,0.005499692,0.012856082,0.00210172,0.031854276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829906,0.00030723854,0.000093087896,0.0003444149,0.0007812968,0.00017494077],"domain_scores_gemma":[0.9994122,0.00017561819,0.00005151936,0.00012853574,0.0001310829,0.00010120475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010679429,0.0018040326,0.001181566,0.0024963953,0.0008896069,0.0008893878,0.002275851,0.0013866462,0.023177408],"category_scores_gemma":[0.0014990867,0.0010781751,0.00077187445,0.00079625973,0.0007013769,0.0009306725,0.0020921007,0.0020159474,0.027220815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005527787,0.0002396196,0.0022817634,0.00052425556,0.00007719942,0.0003319085,0.0001238691,0.00021772717,0.8189749,0.0010444372,0.026112217,0.14951926],"study_design_scores_gemma":[0.00068310276,0.001203319,0.02402163,0.00014770681,0.0002786424,0.0071094446,0.00010755803,0.013537591,0.7599933,0.0026862521,0.18998528,0.00024602114],"about_ca_topic_score_codex":0.0006944292,"about_ca_topic_score_gemma":0.0020326404,"teacher_disagreement_score":0.023177408,"about_ca_system_score_codex":0.00028196094,"about_ca_system_score_gemma":0.0011312659,"threshold_uncertainty_score":0.077536166},"labels":[],"label_agreement":null},{"id":"W1993372469","doi":"10.1016/s0306-4530(01)00064-6","title":"How circulating cytokines trigger the neural circuits that control the hypothalamic–pituitary–adrenal axis","year":2001,"lang":"en","type":"review","venue":"Psychoneuroendocrinology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":196,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Medical Research Council Canada; Canada Research Chairs","keywords":"Signal transduction; Hypothalamus; Neuroscience; Proinflammatory cytokine; Biological neural network; Biology; Glucocorticoid; Glucocorticoid receptor; Innate immune system; Immune system; Inflammation; Cell biology; Endocrinology; Immunology","score_opus":0.05794773227127036,"score_gpt":0.28830002070094995,"score_spread":0.23035228842967959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993372469","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000916221,0.9918658,0.001161881,0.0015263283,0.0012657193,0.000010750476,0.000023443963,0.000021431195,0.0032084084],"genre_scores_gemma":[0.005349697,0.99013793,0.0005511104,0.00075245043,0.0008300903,0.000012053733,0.000026469714,0.00000285125,0.0023374183],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985707,0.00002837765,0.00001760804,0.000031942993,0.000047616486,0.000017372091],"domain_scores_gemma":[0.99979347,0.00008695339,0.00002599433,0.00000961825,0.000058322705,0.000025731186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051491783,0.0007785373,0.0009377384,0.000729037,0.00027229942,0.0014066616,0.00085066294,0.0014840425,0.0021570718],"category_scores_gemma":[0.00054102496,0.00020057645,0.00019809276,0.0007859168,0.0008532119,0.0018490868,0.0004949947,0.0016458381,0.0015906343],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028339238,0.000064502026,0.000649287,0.004290408,0.000069951806,0.000925064,0.00012921501,0.0005653048,0.020396337,0.008374735,0.022487426,0.94176435],"study_design_scores_gemma":[0.000083870094,0.00017557618,0.004568333,0.001478619,0.00010993817,0.0044363346,0.000386163,0.00031840708,0.008469982,0.0128372405,0.96709263,0.000042875192],"about_ca_topic_score_codex":0.0008820868,"about_ca_topic_score_gemma":0.0016531621,"teacher_disagreement_score":0.0021570718,"about_ca_system_score_codex":0.00075860426,"about_ca_system_score_gemma":0.0007700128,"threshold_uncertainty_score":0.007216096},"labels":[],"label_agreement":null},{"id":"W1993535064","doi":"10.1371/journal.pone.0044606","title":"Neutrophils Are Not Less Sensitive Than Other Blood Leukocytes to the Genomic Effects of Glucocorticoids","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Immunology","score_opus":0.02284683055432795,"score_gpt":0.20539599901948696,"score_spread":0.182549168465159,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993535064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97830635,0.015939705,0.0023695962,0.00027469426,0.00009485885,0.00009623044,0.0007100282,0.000049560276,0.002158993],"genre_scores_gemma":[0.9911265,0.0032455365,0.0015566567,0.00026098956,0.00007012083,0.00010220771,0.001024216,0.000014851653,0.002599003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99930763,0.00016788881,0.00005802608,0.00019906074,0.00016270837,0.00010465683],"domain_scores_gemma":[0.999388,0.00011831657,0.00022316322,0.000062474515,0.00011133028,0.00009679121],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003078666,0.00030684748,0.00041550113,0.00027402616,0.00017716274,0.00062624435,0.00015016622,0.00037146246,0.0038579374],"category_scores_gemma":[0.00062274426,0.0001487474,0.00019868257,0.00013289967,0.0003502427,0.0002611659,0.00027852206,0.0004131883,0.0006966617],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00084419164,0.000033755525,0.006252636,0.00026453548,0.000027892766,0.0002489082,0.000109203545,0.000032368516,0.9851627,0.00007402462,0.00015484716,0.0067949477],"study_design_scores_gemma":[0.00016676376,0.0052576954,0.35139853,0.00024418224,0.00027811152,0.009993894,0.0009358962,0.00042272365,0.6034027,0.00039928235,0.027445091,0.00005524484],"about_ca_topic_score_codex":0.0006040046,"about_ca_topic_score_gemma":0.0009182237,"teacher_disagreement_score":0.0038579374,"about_ca_system_score_codex":0.00023228406,"about_ca_system_score_gemma":0.00019139261,"threshold_uncertainty_score":0.0129060745},"labels":[],"label_agreement":null},{"id":"W1993771936","doi":"10.1111/j.1741-6892.2004.00426.x","title":"ES03.01 
The body as fortress: innate immune surveillance","year":2004,"lang":"en","type":"review","venue":"Vox Sanguinis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Fortress (chess); Innate immune system; Medicine; Immunology; Immune system; Intensive care medicine; History; Ancient history","score_opus":0.016508042405753213,"score_gpt":0.2954409562960088,"score_spread":0.2789329138902556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1993771936","genre_codex":"other","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027129402,0.02810268,0.022014221,0.025187256,0.021946931,0.00024955193,0.021286996,0.0061255293,0.8479574],"genre_scores_gemma":[0.14981413,0.019825222,0.01480315,0.009318723,0.0039195353,0.00030150596,0.02784248,0.0024445998,0.7717306],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988379,0.00017708122,0.000041943193,0.0003319811,0.0003707418,0.00024032546],"domain_scores_gemma":[0.9988933,0.00009131171,0.00010449488,0.00014018812,0.0003740525,0.00039661844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015459248,0.0012166406,0.0011772419,0.00078991713,0.0018313864,0.007089306,0.0018779052,0.004782518,0.26275203],"category_scores_gemma":[0.0014243977,0.0003519927,0.0008039713,0.0012054082,0.0012926593,0.0024502047,0.002930246,0.002843736,0.2131408],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009493113,0.00027892433,0.006253576,0.001975614,0.000095283365,0.0023003425,0.00051077467,0.00064988923,0.07634867,0.13892664,0.41403013,0.3576808],"study_design_scores_gemma":[0.000037671824,0.00007231179,0.0025051197,0.00026283987,0.000020044863,0.00093088334,0.00016722645,0.00035962494,0.003104331,0.006428871,0.986088,0.000023061202],"about_ca_topic_score_codex":0.0016204324,"about_ca_topic_score_gemma":0.00092946284,"teacher_disagreement_score":0.26275203,"about_ca_system_score_codex":0.0015489453,"about_ca_system_score_gemma":0.002336408,"threshold_uncertainty_score":0.8789931},"labels":[],"label_agreement":null},{"id":"W1994175475","doi":"10.1097/01.shk.0000191343.21228.78","title":"NEUTRALIZATION OF TUMOR NECROSIS FACTOR IN PRECLINICAL MODELS OF SEPSIS","year":2005,"lang":"en","type":"review","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Sepsis; Immunology; Tumor necrosis factor alpha; Medicine; Streptococcus pneumoniae; Neutralization; Pneumonia; Antimicrobial; Population; Inflammation; Systemic inflammation; Biology; Microbiology; Antibiotics; Internal medicine; Antibody","score_opus":0.08548767647807477,"score_gpt":0.36173012261233645,"score_spread":0.2762424461342617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994175475","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0098337205,0.9881436,0.00081399054,0.00014999001,0.00006133018,0.0002520823,0.00026117716,0.000019851004,0.0004641923],"genre_scores_gemma":[0.06340814,0.9305502,0.00359446,0.0007463135,0.00014863115,0.0007279122,0.0005324443,0.000012396168,0.0002793974],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99417627,0.0027683747,0.0016421194,0.000417057,0.0009107608,0.000085364976],"domain_scores_gemma":[0.9871071,0.006206801,0.004951448,0.00037826685,0.0011763952,0.00017999084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007845378,0.0006900076,0.0027545122,0.002874989,0.00021640536,0.00097112264,0.00060143654,0.0008283368,0.0007065776],"category_scores_gemma":[0.009218634,0.00035258482,0.0015566042,0.003614021,0.000631668,0.0007508393,0.00038976583,0.0006455545,0.000296935],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007412232,0.00052815804,0.010229075,0.37194145,0.0114096,0.00062317326,0.00029982816,0.00065824704,0.049139623,0.0009324628,0.003727995,0.5430982],"study_design_scores_gemma":[0.005630637,0.061497033,0.107510254,0.29512975,0.09814682,0.009558657,0.0013064751,0.0016789319,0.09910286,0.0043535014,0.3156963,0.00038884275],"about_ca_topic_score_codex":0.00043871815,"about_ca_topic_score_gemma":0.0010480932,"teacher_disagreement_score":0.007845378,"about_ca_system_score_codex":0.00077055086,"about_ca_system_score_gemma":0.0020212394,"threshold_uncertainty_score":0.041490793},"labels":[],"label_agreement":null},{"id":"W1994306951","doi":"10.1016/s0165-2427(01)00379-8","title":"Monocytes are required for optimum in vitro stimulation of bovine peripheral blood mononuclear cells by non-methylated CpG motifs","year":2002,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"CpG Oligodeoxynucleotide; Biology; Peripheral blood mononuclear cell; CpG site; Population; Immune system; Molecular biology; Secretion; T cell; Immunology; Cell; In vitro; DNA methylation; Biochemistry; Gene expression; Gene; Medicine","score_opus":0.01495533771166194,"score_gpt":0.2314873541842438,"score_spread":0.21653201647258186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994306951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989611,0.004095801,0.0031938357,0.0001768911,0.000076441014,0.000067498215,0.00054178026,0.000057173645,0.002179455],"genre_scores_gemma":[0.9944723,0.00071957824,0.0016552327,0.00008528981,0.000027522814,0.00005916862,0.0009871802,0.000016610486,0.0019771827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992938,0.0002739262,0.000058617283,0.000044963323,0.00011399292,0.00021467134],"domain_scores_gemma":[0.99945396,0.00024168694,0.000078035686,0.00005347089,0.00008396458,0.00008888461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004949744,0.0003243709,0.0004186841,0.0002312865,0.00022011848,0.0006324177,0.00019673564,0.00039882588,0.0030231718],"category_scores_gemma":[0.00076017535,0.00029596078,0.0002529185,0.00015565757,0.00017246134,0.00016473007,0.00042278727,0.00055195624,0.0012998465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068851426,0.000033510543,0.00057514827,0.00005750931,0.0000035306923,0.00006200279,0.000052757357,0.000030315858,0.9971807,0.00006851228,0.000087163455,0.001160403],"study_design_scores_gemma":[0.00009141822,0.00087869767,0.047328208,0.00005863758,0.000038431524,0.0005803701,0.00026132364,0.0009024298,0.94282657,0.00013018872,0.0068896473,0.000014183463],"about_ca_topic_score_codex":0.00211313,"about_ca_topic_score_gemma":0.004275283,"teacher_disagreement_score":0.0030231718,"about_ca_system_score_codex":0.00032278008,"about_ca_system_score_gemma":0.00034020437,"threshold_uncertainty_score":0.010113537},"labels":[],"label_agreement":null},{"id":"W1994333507","doi":"10.1038/sj.gene.6364280","title":"A CXCL2 tandem repeat promoter polymorphism is associated with susceptibility to severe sepsis in the Spanish population","year":2006,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Biology; Odds ratio; Haplotype; Heterozygote advantage; Allele; Sepsis; Genetics; Population; Immunology; Gene; Internal medicine; Medicine","score_opus":0.010615653567010488,"score_gpt":0.2210327050932341,"score_spread":0.21041705152622361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994333507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994056,0.00011047323,0.00010762992,0.000062458945,0.000009486987,0.0000023096952,0.0000836367,0.0000028374996,0.00021551714],"genre_scores_gemma":[0.9993104,0.00012839856,0.00009234321,0.00003827017,0.000019546062,0.000004817451,0.00012274926,0.0000042769243,0.0002791977],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997514,0.000093827424,0.000017712617,0.0000653847,0.000024895224,0.00004671479],"domain_scores_gemma":[0.9993345,0.00016853774,0.0001735941,0.000052243333,0.00011182091,0.0001592102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003982721,0.000461971,0.00052054104,0.0005687995,0.0003911585,0.0003952851,0.00027384254,0.00045570516,0.0019297218],"category_scores_gemma":[0.0010515042,0.00026011773,0.00042463597,0.0007189059,0.00032099188,0.00013801949,0.00023057948,0.00047015277,0.0002043917],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012487756,0.00013662186,0.9872804,0.000024636734,0.00018155381,0.0011218744,0.0003279208,0.0000906076,0.0060724015,0.00006135671,0.00033567942,0.0031181748],"study_design_scores_gemma":[0.000062677645,0.0001984654,0.99723524,0.000011077525,0.00008140786,0.0010734474,0.00045377327,0.00030232646,0.00015459595,0.00007821814,0.00034005466,0.000008896951],"about_ca_topic_score_codex":0.015348194,"about_ca_topic_score_gemma":0.0062650912,"teacher_disagreement_score":0.015348194,"about_ca_system_score_codex":0.00024143874,"about_ca_system_score_gemma":0.00036049946,"threshold_uncertainty_score":0.030517697},"labels":[],"label_agreement":null},{"id":"W1994547455","doi":"10.1016/s0006-2952(99)00411-6","title":"Prophylaxis against lipopolysaccharide-induced lung injuries by liposome-entrapped dexamethasone in rats","year":2000,"lang":"en","type":"article","venue":"Biochemical Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"","keywords":"Dexamethasone; Lipopolysaccharide; Lung; Liposome; Pharmacology; Medicine; Chemistry; Immunology; Anesthesia; Internal medicine; Biochemistry","score_opus":0.006762678540492027,"score_gpt":0.2573724253962821,"score_spread":0.25060974685579007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994547455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99637187,0.0012185236,0.0012433131,0.0002496662,0.00012394346,0.00004924811,0.00017443011,0.00011549133,0.00045357613],"genre_scores_gemma":[0.9959282,0.0012290993,0.0007297725,0.0000592566,0.00004173499,0.000045716384,0.00016344461,0.000011626295,0.0017910182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981683,0.000022775152,0.000013523977,0.000032841413,0.00002822324,0.00008585945],"domain_scores_gemma":[0.99974746,0.000028458577,0.00006741315,0.000042283627,0.000024752042,0.00008954278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022750536,0.0007953001,0.0006342427,0.0005480805,0.0003081297,0.0002954147,0.00047891567,0.0005843419,0.0014202374],"category_scores_gemma":[0.00024351687,0.00026610517,0.00042106165,0.0002206217,0.0007663143,0.00056982914,0.00025325728,0.0013291839,0.00035444376],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016508792,0.0024131758,0.0009650963,0.00015267218,0.000038977487,0.00028110077,0.00009874408,0.00041146626,0.96679294,0.00043507022,0.00020367232,0.01169831],"study_design_scores_gemma":[0.0005471796,0.017310638,0.002945588,0.000020423493,0.000068541296,0.00020894238,0.00012000428,0.00071909215,0.976641,0.00020237606,0.0011928197,0.000023322493],"about_ca_topic_score_codex":0.0010733978,"about_ca_topic_score_gemma":0.0011744866,"teacher_disagreement_score":0.0014202374,"about_ca_system_score_codex":0.00027983027,"about_ca_system_score_gemma":0.00070204865,"threshold_uncertainty_score":0.004751146},"labels":[],"label_agreement":null},{"id":"W1994577423","doi":"10.1016/s0966-842x(00)01840-0","title":"Gram-negative pathogens and molecular mimicry: is there a case for mistaken identity?","year":2000,"lang":"en","type":"article","venue":"Trends in Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; University Health Network","funders":"","keywords":"Molecular mimicry; Biology; Mimicry; Autoimmunity; Immune system; Identity (music); Immunology; Genetics; Ecology","score_opus":0.013038985526892814,"score_gpt":0.2664542658464295,"score_spread":0.2534152803195367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994577423","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25252306,0.25332105,0.02227781,0.43038937,0.01059079,0.000074435484,0.00016063382,0.00027158565,0.030391334],"genre_scores_gemma":[0.838684,0.07578625,0.012122339,0.05692803,0.0128547,0.000063071675,0.000093608265,0.000070361806,0.0033976967],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99619675,0.0012966975,0.00034173645,0.0005430012,0.0009113267,0.00071051734],"domain_scores_gemma":[0.9802407,0.012217336,0.0022236505,0.002261517,0.0018104401,0.0012463453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010429272,0.00052258535,0.0019052558,0.0018952569,0.0019011074,0.005618515,0.0025233603,0.008598284,0.004667902],"category_scores_gemma":[0.03487885,0.00051587925,0.0006573291,0.0010612797,0.013701672,0.018725429,0.004220645,0.008151158,0.0013519233],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030789713,0.000502634,0.097747624,0.0020340977,0.00042700852,0.045862924,0.014236085,0.0008714397,0.015342528,0.3087072,0.05763899,0.4535504],"study_design_scores_gemma":[0.00023103869,0.00072761456,0.03510611,0.0022316312,0.0002491752,0.18260336,0.018500574,0.003042923,0.0040827687,0.60014194,0.15267749,0.00040536685],"about_ca_topic_score_codex":0.0010316224,"about_ca_topic_score_gemma":0.0009195616,"teacher_disagreement_score":0.010429272,"about_ca_system_score_codex":0.0011878426,"about_ca_system_score_gemma":0.0013472448,"threshold_uncertainty_score":0.055155933},"labels":[],"label_agreement":null},{"id":"W1995051048","doi":"10.1016/j.cair.2004.07.001","title":"A role for the lymphotoxin/LIGHT pathway in T-cell mediated autoimmunity and infectious disease","year":2004,"lang":"en","type":"article","venue":"Clinical and Applied Immunology Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Lymphotoxin; Lymphotoxin beta receptor; Immunology; Autoimmunity; Autoimmune disease; Immune system; Biology; Signal transduction; Tumor necrosis factor alpha; Receptor; T cell; Cell biology; Cancer research; Antibody; Genetics","score_opus":0.019730008124960542,"score_gpt":0.2738768840458428,"score_spread":0.25414687592088225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995051048","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.102259524,0.84222203,0.016792875,0.014203071,0.0038152607,0.00004410442,0.000051594583,0.0001973011,0.020414282],"genre_scores_gemma":[0.5568881,0.41113085,0.007398536,0.003022739,0.005580055,0.00006262705,0.000061028342,0.000039261522,0.01581687],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998548,0.00003292024,0.000014813388,0.00001948749,0.000036483194,0.00004155591],"domain_scores_gemma":[0.99969673,0.00012854818,0.000040885912,0.000016343207,0.00004209371,0.0000754058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063749496,0.00032484904,0.00042630333,0.0004935243,0.0003598531,0.0009582959,0.00044401598,0.00095422607,0.0020945936],"category_scores_gemma":[0.0003473024,0.00010235176,0.00024358957,0.00020147541,0.001295686,0.0012032647,0.0007435225,0.0015316848,0.00030367845],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036638894,0.00061027973,0.0042461753,0.0030573641,0.0001444962,0.0051770955,0.00044998474,0.0011681756,0.4583004,0.06762356,0.011328783,0.44422972],"study_design_scores_gemma":[0.0011037884,0.0050037233,0.032619555,0.0017241456,0.00041562726,0.021193136,0.0010738419,0.0036673332,0.15290451,0.16450022,0.61563647,0.00015762694],"about_ca_topic_score_codex":0.0002782776,"about_ca_topic_score_gemma":0.00037908033,"teacher_disagreement_score":0.0020945936,"about_ca_system_score_codex":0.00049037195,"about_ca_system_score_gemma":0.0004348622,"threshold_uncertainty_score":0.007007122},"labels":[],"label_agreement":null},{"id":"W1995396458","doi":"10.1371/journal.pone.0059604","title":"Enhancing Specific-Antibody Production to the ragB Vaccine with GITRL That Expand Tfh, IFN-γ+ T Cells and Attenuates Porphyromonas gingivalis Infection in Mice","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Government of Jiangsu Province; National Natural Science Foundation of China","keywords":"Porphyromonas gingivalis; Biology; Microbiology; Immune system; Spleen; Antibody; Virology; Molecular biology; Immunology; Bacteria","score_opus":0.016757017041042082,"score_gpt":0.20650764345490033,"score_spread":0.18975062641385826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995396458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919429,0.0018705298,0.0035498568,0.00027661357,0.00013963004,0.00018830335,0.00042403425,0.0003263326,0.0012818538],"genre_scores_gemma":[0.9897254,0.0015303077,0.004387689,0.00021980116,0.00008263842,0.00026650226,0.00074900355,0.000050441384,0.0029882325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99966824,0.00004471756,0.00002470115,0.00007917035,0.0000772066,0.00010600581],"domain_scores_gemma":[0.99986684,0.000013140223,0.000049815833,0.000014273728,0.000010910085,0.0000449635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002856873,0.0008337442,0.0005737766,0.00056121737,0.00012620713,0.00030429487,0.00036285477,0.00069357705,0.0010078201],"category_scores_gemma":[0.00016246167,0.00030868367,0.0004077985,0.00018322047,0.0003849873,0.00031428362,0.00023220989,0.0014437711,0.0004007694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039591308,0.0004076961,0.00010329895,0.000091626265,0.000011056417,0.00004210475,0.000026757667,0.00016605367,0.9962096,0.00006712407,0.000083010884,0.0023957265],"study_design_scores_gemma":[0.0005693187,0.009204708,0.0034813485,0.00003979326,0.000115124756,0.0004228042,0.00005961474,0.0022683854,0.97871315,0.000119101234,0.004991386,0.000015260652],"about_ca_topic_score_codex":0.0003681956,"about_ca_topic_score_gemma":0.0005002367,"teacher_disagreement_score":0.0010078201,"about_ca_system_score_codex":0.00025409268,"about_ca_system_score_gemma":0.00023870073,"threshold_uncertainty_score":0.0033715367},"labels":[],"label_agreement":null},{"id":"W1995498415","doi":"10.1097/00003246-200006000-00030","title":"Endotoxin promotes adhesion of human erythrocytes to human vascular endothelial cells under conditions of flow","year":2000,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"","keywords":"Incubation; Endothelial stem cell; Endothelium; Adhesion; In vitro; Medicine; Cell adhesion; Molecular biology; Immunology; Biology; Chemistry; Biochemistry; Endocrinology","score_opus":0.015838756414154026,"score_gpt":0.2989627438639674,"score_spread":0.2831239874498134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995498415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978277,0.0015437906,0.00033743517,0.00002660169,0.000025148462,0.000040399624,0.00002121252,0.000006500041,0.00017131689],"genre_scores_gemma":[0.9972582,0.0012661295,0.00080309616,0.0001326781,0.000084149106,0.000070681795,0.00008680091,0.0000035818541,0.0002945878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988702,0.0006514407,0.0000665427,0.000120051096,0.00014510358,0.00014661309],"domain_scores_gemma":[0.9987411,0.00054258667,0.00047950353,0.00006505411,0.00005890908,0.00011295533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011447895,0.00039873918,0.0004851336,0.00014322135,0.00013423608,0.0005393115,0.00020095128,0.00043165908,0.0012622656],"category_scores_gemma":[0.0013331237,0.00017913827,0.0002939249,0.000104927894,0.00037170778,0.00028681167,0.00024887943,0.00049451104,0.0001550792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.070429094,0.0076907515,0.011786324,0.0009876683,0.00022042906,0.00034837498,0.0002211245,0.00033743223,0.876849,0.00012166667,0.0003224192,0.03068567],"study_design_scores_gemma":[0.006641597,0.34067497,0.1678482,0.00025106716,0.0005460702,0.0010201382,0.00037971468,0.0019790174,0.47775882,0.00016351606,0.0026859376,0.00005099357],"about_ca_topic_score_codex":0.00019906863,"about_ca_topic_score_gemma":0.0002056669,"teacher_disagreement_score":0.0012622656,"about_ca_system_score_codex":0.00015891888,"about_ca_system_score_gemma":0.00019594634,"threshold_uncertainty_score":0.006054342},"labels":[],"label_agreement":null},{"id":"W1995658707","doi":"10.1128/jb.182.18.5225-5230.2000","title":"Characterization of <i>Escherichia coli</i> DNA Lesions Generated within J774 Macrophages","year":2000,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":101,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Israel Science Foundation; Petroleum Technology Alliance Canada","keywords":"Biology; Escherichia coli; DNA damage; Respiratory burst; Microbiology; DNA; Bacteria; Intracellular; Macrophage; Reactive oxygen species; Enterobacteriaceae; Molecular biology; Gene; Cell biology; In vitro; Biochemistry; Genetics","score_opus":0.00924546744456763,"score_gpt":0.22076071855923585,"score_spread":0.2115152511146682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995658707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99485934,0.00069426204,0.0033840293,0.00004563741,0.000008429497,0.00003547848,0.00029430326,0.000024341018,0.00065417006],"genre_scores_gemma":[0.9932713,0.0006493358,0.003979108,0.00006346649,0.000016649516,0.000055840443,0.00083861017,0.000020412646,0.0011051696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986935,0.000026563419,0.000013719524,0.000020664462,0.000034934274,0.000034760964],"domain_scores_gemma":[0.9997826,0.000040751456,0.000068463836,0.000028388611,0.000046712423,0.000033072865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020863052,0.00029093257,0.00018819536,0.00032824863,0.00015369013,0.00019114348,0.00014033832,0.0003210063,0.00039133438],"category_scores_gemma":[0.00021337018,0.00010848585,0.00016233641,0.00015733391,0.00017930866,0.0001753967,0.00014204856,0.00026210284,0.00031798286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002845781,0.0000078105895,0.00033280085,0.000011359032,0.0000011297813,0.000039779137,0.000009305908,0.000012815801,0.99936396,0.00001983298,0.0000034109642,0.00016937236],"study_design_scores_gemma":[0.000007356858,0.00030128143,0.010975155,0.0000071014183,0.000012645711,0.00060378783,0.000073919204,0.00028989377,0.98679763,0.000053375305,0.0008742566,0.0000036276656],"about_ca_topic_score_codex":0.00027737647,"about_ca_topic_score_gemma":0.00020994515,"teacher_disagreement_score":0.00039133438,"about_ca_system_score_codex":0.000097520395,"about_ca_system_score_gemma":0.00010248595,"threshold_uncertainty_score":0.0013091564},"labels":[],"label_agreement":null},{"id":"W1996017909","doi":"10.1016/s0165-2427(00)00162-8","title":"Effects of human IL-8 isoforms on bovine neutrophil function in vitro","year":2000,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Dairy Farmers of Ontario","keywords":"Superoxide; Zymosan; Myeloperoxidase; Chemotaxis; Degranulation; In vitro; Lipopolysaccharide; Molecular biology; Neutrophile; Interleukin 8; Alkaline phosphatase; Leukotriene B4; Monocyte; Biology; Granulocyte; Biochemistry; Chemistry; Immunology; Cytokine; Inflammation; Enzyme; Receptor","score_opus":0.007016968813595927,"score_gpt":0.22255648702221412,"score_spread":0.2155395182086182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996017909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946355,0.0035760275,0.00046572095,0.000082934195,0.00005580314,0.000031399115,0.00025124865,0.000009918953,0.0008912882],"genre_scores_gemma":[0.9950557,0.0014440588,0.0009358746,0.000077306024,0.00004291586,0.000044152875,0.00097287033,0.0000068154795,0.0014203142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994616,0.0002255842,0.000059797243,0.000059107915,0.00007353756,0.00012042453],"domain_scores_gemma":[0.99955326,0.00023621508,0.00004615832,0.000058471967,0.00004605986,0.000059857386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008410047,0.00034234583,0.0002760076,0.00012746871,0.00013478452,0.0003345904,0.0002312349,0.00028035554,0.0017980285],"category_scores_gemma":[0.00064179336,0.00013208909,0.00021131843,0.00014339121,0.0002908444,0.00025104362,0.00021235114,0.00066912564,0.0004236048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010417312,0.00064039347,0.0015470063,0.0001915202,0.000030296513,0.0002510104,0.00022704426,0.00044619368,0.9789428,0.0001283898,0.0002925865,0.006885453],"study_design_scores_gemma":[0.0014238869,0.012086849,0.02949005,0.000105493615,0.00014907007,0.000909735,0.0003490192,0.002892668,0.9418462,0.00018689073,0.0105326455,0.00002742034],"about_ca_topic_score_codex":0.0009416658,"about_ca_topic_score_gemma":0.0015638979,"teacher_disagreement_score":0.0017980285,"about_ca_system_score_codex":0.00027280225,"about_ca_system_score_gemma":0.00022466171,"threshold_uncertainty_score":0.0060150027},"labels":[],"label_agreement":null},{"id":"W1996028958","doi":"10.1016/j.tcm.2005.06.001","title":"Is There a Role for Cardiomyocyte Toll-Like Receptor 4 in Endotoxemia?","year":2005,"lang":"en","type":"review","venue":"Trends in Cardiovascular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"TLR4; Lipopolysaccharide; Immune system; Toll-like receptor; Myocyte; Receptor; Sepsis; Biology; Cell biology; Immunology; Inflammation; Innate immune system; Medicine; Internal medicine","score_opus":0.03923148993024987,"score_gpt":0.3235173426324253,"score_spread":0.28428585270217543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996028958","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026240636,0.9966181,0.00023935338,0.0012290853,0.0009787071,0.00000321078,0.000013228544,0.000011699372,0.0006441719],"genre_scores_gemma":[0.0015956037,0.99495125,0.0003240625,0.0008059165,0.001315213,0.000007645665,0.000031229396,0.000001713819,0.000967425],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998456,0.00002198238,0.000027415654,0.00002902906,0.000051669067,0.000024309362],"domain_scores_gemma":[0.99968183,0.00013473192,0.000047743175,0.000012164442,0.000081462575,0.00004197623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009123225,0.0008441797,0.0023439485,0.00060407806,0.00025730702,0.0011010714,0.0013059338,0.002047587,0.002720698],"category_scores_gemma":[0.0008617743,0.00022350329,0.00054215785,0.0006174198,0.00075519935,0.0016777881,0.0005603998,0.0022180565,0.0028076074],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052923785,0.000096776595,0.00060783175,0.0063728536,0.00015554845,0.0009220184,0.000047851725,0.00029045425,0.0045243064,0.002644866,0.04542346,0.9383848],"study_design_scores_gemma":[0.00018680938,0.00039899102,0.0023339565,0.0023640136,0.00035679952,0.0036829426,0.00014907002,0.0001893398,0.0011838829,0.0032512397,0.98586243,0.00004060226],"about_ca_topic_score_codex":0.0007113774,"about_ca_topic_score_gemma":0.0011609923,"teacher_disagreement_score":0.002720698,"about_ca_system_score_codex":0.00042253206,"about_ca_system_score_gemma":0.00087526836,"threshold_uncertainty_score":0.00910157},"labels":[],"label_agreement":null},{"id":"W1996118452","doi":"10.1016/j.vetimm.2011.09.004","title":"In vivo administration of ligands for chicken toll-like receptors 4 and 21 induces the expression of immune system genes in the spleen","year":2011,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Guelph","funders":"","keywords":"Biology; Immune system; TLR4; Toll-like receptor; TLR9; Innate immune system; CpG Oligodeoxynucleotide; Immunology; Lipopolysaccharide; Receptor; Acquired immune system; Interferon; Major histocompatibility complex; Spleen; Stimulation; Gene; Gene expression; Genetics; Endocrinology","score_opus":0.0238514812219997,"score_gpt":0.2481600901106681,"score_spread":0.2243086088886684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996118452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99570316,0.0006722124,0.0012073547,0.00013214491,0.00009851967,0.000040864932,0.0002817874,0.00008403319,0.0017798585],"genre_scores_gemma":[0.98884726,0.0005647555,0.0011493707,0.0001621368,0.000051760195,0.00007033837,0.00070165144,0.00004990335,0.0084028365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997073,0.00004418044,0.000019889902,0.00006757129,0.000052697746,0.00010831028],"domain_scores_gemma":[0.99955016,0.00011951768,0.00011014129,0.000050452,0.00003119158,0.00013855424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026683786,0.0006263031,0.00044946582,0.0007123998,0.0002765621,0.00057380553,0.00017918833,0.00055848603,0.0021218432],"category_scores_gemma":[0.0002015094,0.00037800762,0.0004150059,0.00019224948,0.00069367426,0.00031485554,0.00020024035,0.0017078586,0.0006556248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007122902,0.000111284775,0.00015888295,0.000023972072,0.0000048546685,0.00004865007,0.000025928792,0.000058377966,0.9981072,0.00007584643,0.000051200488,0.0006214314],"study_design_scores_gemma":[0.00009627207,0.0021022672,0.0058924435,0.000010610505,0.00003734463,0.00019124965,0.000108141925,0.00072079734,0.98968786,0.00010806162,0.0010350633,0.000009914973],"about_ca_topic_score_codex":0.00051721797,"about_ca_topic_score_gemma":0.0014516148,"teacher_disagreement_score":0.0021218432,"about_ca_system_score_codex":0.00057445816,"about_ca_system_score_gemma":0.00039996562,"threshold_uncertainty_score":0.0070982575},"labels":[],"label_agreement":null},{"id":"W1996399705","doi":"10.1046/j.1365-2141.2003.04271.x","title":"Platelets may inhibit leucotriene biosynthesis by human neutrophils at the integrin level","year":2003,"lang":"en","type":"article","venue":"British Journal of Haematology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Institut National de la Santé et de la Recherche Médicale","keywords":"Platelet; Chemistry; Biochemistry; Lipoxygenase; Arachidonate 5-lipoxygenase; Leukotriene B4; Arachidonic acid; Integrin; Platelet activation; Chemotaxis; Metabolite; Inflammation; Immunology; Biology; Enzyme; Receptor","score_opus":0.017597820731875328,"score_gpt":0.23742325087976054,"score_spread":0.21982543014788522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996399705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9763091,0.01627363,0.002945004,0.00026647223,0.00007696431,0.00009278986,0.00018572553,0.000053057716,0.0037973246],"genre_scores_gemma":[0.9918893,0.0036587147,0.001055094,0.00014197292,0.000045306875,0.000053558382,0.000408844,0.0000088699735,0.0027383594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998018,0.00008442547,0.000014952574,0.00001610746,0.000040155923,0.000042587755],"domain_scores_gemma":[0.99993336,0.00002279619,0.000015468675,0.000008604091,0.000009846414,0.000009789272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021299963,0.00029562548,0.00017590719,0.00010992216,0.00009714153,0.0002707018,0.00013735713,0.00022173244,0.001544327],"category_scores_gemma":[0.0003300706,0.00009733532,0.00019414761,0.000079557154,0.00008316071,0.00012798244,0.00018777272,0.00030104112,0.0004926069],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011921996,0.00010160167,0.00075401017,0.00013142891,0.000035804245,0.00032336893,0.00005334318,0.0000624302,0.98583984,0.00024560269,0.00017325734,0.011086954],"study_design_scores_gemma":[0.00016668957,0.002868064,0.015887516,0.000039549224,0.00012528127,0.0010151131,0.000051801977,0.0009735774,0.968991,0.000209217,0.00966464,0.0000075136704],"about_ca_topic_score_codex":0.00037629766,"about_ca_topic_score_gemma":0.00038988065,"teacher_disagreement_score":0.001544327,"about_ca_system_score_codex":0.00008951931,"about_ca_system_score_gemma":0.00015773979,"threshold_uncertainty_score":0.005166292},"labels":[],"label_agreement":null},{"id":"W1996565536","doi":"10.1002/jcp.20739","title":"Microbial induction of CARD15 expression in intestinal epithelial cells via toll‐like receptor 5 triggers an antibacterial response loop","year":2006,"lang":"en","type":"article","venue":"Journal of Cellular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Institut National de la Santé et de la Recherche Médicale","keywords":"TLR5; NOD2; Flagellin; Biology; Transfection; TLR4; TLR2; Enterocyte; Toll-like receptor; Cell biology; Innate immune system; Intestinal epithelium; Microbiology; Immune system; Cell culture; Signal transduction; Immunology; Receptor; Genetics; Biochemistry; Epithelium; Small intestine","score_opus":0.006745677035198192,"score_gpt":0.21219904624033112,"score_spread":0.20545336920513294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996565536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971866,0.00065002777,0.0012148599,0.000039876442,0.000023369606,0.000014356738,0.00018455218,0.000031710242,0.0006546326],"genre_scores_gemma":[0.9971722,0.0002512474,0.0010712484,0.000045745295,0.0000056662684,0.000019104826,0.00034332948,0.0000056836193,0.001085746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997745,0.0000502328,0.000027498227,0.000038556427,0.00004238732,0.000066765046],"domain_scores_gemma":[0.9998702,0.000024328026,0.00003081695,0.000023570337,0.000014199414,0.000036893507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019737934,0.00030425718,0.0002412597,0.00013708719,0.00012593364,0.00028366584,0.00011774784,0.00023889335,0.0011403087],"category_scores_gemma":[0.00011657612,0.00015763441,0.0003079717,0.000092717644,0.00019350668,0.00015994333,0.0003071056,0.00041262578,0.0003393063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011019769,0.000013056425,0.00025369588,0.00003384164,0.0000026171213,0.000059019967,0.000010594712,0.0000135752125,0.999143,0.00003810656,0.000013344715,0.00030891388],"study_design_scores_gemma":[0.000028323399,0.00037004604,0.017108342,0.000010522721,0.000014154846,0.00030024926,0.00006808908,0.00066705863,0.9802193,0.000037200556,0.0011727061,0.000004047669],"about_ca_topic_score_codex":0.00020747617,"about_ca_topic_score_gemma":0.0003132041,"teacher_disagreement_score":0.0011403087,"about_ca_system_score_codex":0.0002219446,"about_ca_system_score_gemma":0.00014795706,"threshold_uncertainty_score":0.0038146973},"labels":[],"label_agreement":null},{"id":"W199702951","doi":"10.4142/jvs.2001.2.1.15","title":"Immunostimulatory effects of anionic alkali mineral complex solution Barodon in porcine lymphocytes","year":2001,"lang":"en","type":"article","venue":"Journal of Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agribrands Purina (Canada)","funders":"Seoul National University","keywords":"Antigen; CD8; Feed conversion ratio; Adjuvant; Internal medicine; Biology; Immunology; Endocrinology; Medicine; Body weight","score_opus":0.021629858019351137,"score_gpt":0.27976937739441204,"score_spread":0.2581395193750609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W199702951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99888974,0.000645133,0.00017174441,0.000016668095,0.000010312854,0.000010873334,0.000020267407,0.0000071011073,0.00022801007],"genre_scores_gemma":[0.99832076,0.0004780906,0.00046866556,0.000036820533,0.000015194685,0.000014359941,0.000050611532,0.0000025255545,0.0006129164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999168,0.000024002391,0.0000061373,0.000013163645,0.00002026334,0.000019639323],"domain_scores_gemma":[0.9999275,0.000016186299,0.000023678323,0.00000430632,0.000008668265,0.000019503113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000120975084,0.00022164999,0.00018994782,0.00013234804,0.0000608051,0.00013738725,0.00012625552,0.00019096315,0.0005345945],"category_scores_gemma":[0.00011789481,0.00007822545,0.00017368914,0.000064917076,0.00012246502,0.00011734075,0.00014086375,0.0002682917,0.00008126382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007991816,0.00009857457,0.00029706428,0.000064234606,0.0000041461485,0.000029690691,0.000017238475,0.000045685407,0.9961099,0.000014200228,0.000012903131,0.0025071278],"study_design_scores_gemma":[0.00018105161,0.026002645,0.013434901,0.00002456875,0.00006274197,0.0002746951,0.00009003586,0.00049473095,0.95753896,0.000025621925,0.0018591827,0.0000108445265],"about_ca_topic_score_codex":0.00029481488,"about_ca_topic_score_gemma":0.00052711554,"teacher_disagreement_score":0.0005345945,"about_ca_system_score_codex":0.00006802231,"about_ca_system_score_gemma":0.00012533308,"threshold_uncertainty_score":0.0017883778},"labels":[],"label_agreement":null},{"id":"W1997135231","doi":"10.1016/j.cellimm.2012.12.001","title":"The TLR2 agonists lipoteichoic acid and Pam3CSK4 induce greater pro-inflammatory responses than inactivated Mycobacterium butyricum","year":2012,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipoteichoic acid; TLR2; Biology; Innate immune system; Immune system; Microbiology; Toll-like receptor; Antigen presentation; Receptor; TLR4; Immunology; T cell; Bacteria; Staphylococcus aureus; Biochemistry","score_opus":0.011985213857501235,"score_gpt":0.21719939905636193,"score_spread":0.2052141851988607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997135231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951997,0.0013910996,0.0010564172,0.00015724442,0.00012939975,0.00003815886,0.00040487284,0.000039177678,0.0015838908],"genre_scores_gemma":[0.9922587,0.00072529487,0.0019208359,0.00021681642,0.000035651097,0.000069451264,0.0010434006,0.000022672673,0.0037072354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996302,0.00008935076,0.000039196464,0.000043329845,0.000069881986,0.0001280385],"domain_scores_gemma":[0.99969816,0.00006816769,0.000058591475,0.000051275547,0.00003661452,0.000087151966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041438683,0.00065217906,0.0006553137,0.00018773529,0.00022045181,0.0006031308,0.00016246602,0.0006530533,0.004733313],"category_scores_gemma":[0.00034146346,0.00017998835,0.00035798093,0.00018452416,0.0002633111,0.0005128669,0.0004124113,0.0013601086,0.0009896358],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014766859,0.00010746126,0.0002180504,0.00006850622,0.000009198904,0.000030100957,0.000012424261,0.00006579031,0.99677604,0.00003891232,0.000039498344,0.0011574723],"study_design_scores_gemma":[0.00009245087,0.0019833893,0.003692689,0.000012725343,0.000020826228,0.00017225971,0.00007398941,0.00034023038,0.9922317,0.00007271578,0.001299462,0.000007393146],"about_ca_topic_score_codex":0.00034124835,"about_ca_topic_score_gemma":0.00049679563,"teacher_disagreement_score":0.004733313,"about_ca_system_score_codex":0.00028666298,"about_ca_system_score_gemma":0.00044454497,"threshold_uncertainty_score":0.01583457},"labels":[],"label_agreement":null},{"id":"W1997409959","doi":"10.1089/109629600750018141","title":"Pathogenesis of Multiple Organ Dysfunction Syndrome: Gut Origin, Protection, and Decontamination","year":2000,"lang":"en","type":"review","venue":"Surgical Infections","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"","keywords":"Multiple organ dysfunction syndrome; Medicine; Pathogenesis; Organ dysfunction; Resuscitation; Immunology; Systemic inflammatory response syndrome; Bacterial translocation; Sepsis; Intensive care medicine; Chromosomal translocation; Biology; Surgery","score_opus":0.02505149409421866,"score_gpt":0.2750092851727026,"score_spread":0.24995779107848395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997409959","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013088962,0.99853086,0.000106272964,0.00028587205,0.00030228737,0.0000032957562,0.000004618652,0.0000052801315,0.00063060643],"genre_scores_gemma":[0.0009521094,0.9976676,0.00013896012,0.00023145505,0.0003398122,0.000005664641,0.000011343375,9.54023e-7,0.0006520553],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998386,0.000034587876,0.000025040601,0.000028403143,0.000057882764,0.000015476136],"domain_scores_gemma":[0.9997534,0.00008847546,0.000040886865,0.000009170764,0.000070256545,0.00003771581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053534814,0.0012990958,0.0017651931,0.0017856726,0.0003641319,0.00093647686,0.0010135135,0.0014093368,0.0021509277],"category_scores_gemma":[0.0005785606,0.00021682028,0.00028617034,0.002061356,0.0007766138,0.0017968742,0.00053817715,0.0013999762,0.0021010733],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013320868,0.000107659456,0.0004927324,0.009169072,0.0000647746,0.00068304397,0.00007644325,0.0003286426,0.0016413853,0.0023501804,0.033118226,0.9518346],"study_design_scores_gemma":[0.000049236016,0.00021199597,0.0035630027,0.003999498,0.00008190339,0.0072019296,0.00017305049,0.00015884973,0.0005663187,0.0040340857,0.97993386,0.000026295169],"about_ca_topic_score_codex":0.00078801246,"about_ca_topic_score_gemma":0.0014682428,"teacher_disagreement_score":0.0021509277,"about_ca_system_score_codex":0.0006534611,"about_ca_system_score_gemma":0.0008541022,"threshold_uncertainty_score":0.0071955323},"labels":[],"label_agreement":null},{"id":"W1997450238","doi":"10.1186/cc11495","title":"Bench-to-bedside review: Clinical experience with the endotoxin activity assay","year":2012,"lang":"en","type":"review","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Sepsis; Lipopolysaccharide; Immune system; Immunology; Lipid A; Septic shock; Etiology; Internal medicine; Intensive care medicine","score_opus":0.10151194030800151,"score_gpt":0.43379512014027527,"score_spread":0.33228317983227373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997450238","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008852039,0.99841416,0.00011968576,0.00019278898,0.00029985415,0.0000058121145,0.00001650252,0.000007159551,0.000855431],"genre_scores_gemma":[0.00054246135,0.99820006,0.00027782356,0.00027994456,0.0002510585,0.0000091257425,0.000038140075,0.0000035624491,0.00039765352],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992914,0.0001459019,0.00013183778,0.00010680153,0.00029205924,0.000031872718],"domain_scores_gemma":[0.9982646,0.00081205973,0.00016475306,0.00005061583,0.0005962871,0.00011174871],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013090039,0.001031337,0.0020854233,0.0035524992,0.00028073243,0.0014511545,0.0013477723,0.0012863739,0.0046871137],"category_scores_gemma":[0.0031029254,0.00034062643,0.0005902512,0.004474109,0.0005606159,0.0020280732,0.00078154705,0.0016657828,0.0043436126],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008199471,0.000052628173,0.00025051885,0.025407607,0.00009373051,0.00032513612,0.000088459965,0.00018423932,0.0010992524,0.00088997296,0.049724497,0.92180187],"study_design_scores_gemma":[0.000022483671,0.000107208885,0.0014135098,0.008472421,0.00016017906,0.0030741373,0.0001125896,0.000070790156,0.00043899464,0.0006728905,0.9854203,0.000034500008],"about_ca_topic_score_codex":0.0009009959,"about_ca_topic_score_gemma":0.0013751705,"teacher_disagreement_score":0.0046871137,"about_ca_system_score_codex":0.0006852915,"about_ca_system_score_gemma":0.0014198046,"threshold_uncertainty_score":0.015679896},"labels":[],"label_agreement":null},{"id":"W1997654193","doi":"10.3892/ol.2012.849","title":"Prevention of human adenocarcinoma with CpG-ODN in a mouse model","year":2012,"lang":"en","type":"article","venue":"Oncology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"Texas Tech University Health Sciences Center","keywords":"Immune system; CpG Oligodeoxynucleotide; Nod; Innate immune system; Cancer research; Immunology; Cancer; Biology; Acquired immune system; Oncogene; CpG site; Cancer cell; Cell cycle; Endocrinology; DNA methylation","score_opus":0.02060691522851405,"score_gpt":0.2742508580000257,"score_spread":0.25364394277151164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997654193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9768152,0.0037598428,0.008506625,0.0007547072,0.0003635325,0.0007261666,0.0013989768,0.00072376407,0.006951207],"genre_scores_gemma":[0.9738661,0.0031465332,0.0070838635,0.00037428027,0.00006268018,0.00046053703,0.0012454172,0.0000556622,0.013704829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969983,0.000056686524,0.000024754261,0.00007930396,0.00007692292,0.00006252048],"domain_scores_gemma":[0.99976367,0.000030502142,0.00005634175,0.000057223442,0.000017211933,0.00007507453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044434267,0.0008486086,0.000522596,0.0008374278,0.00028028284,0.00030769643,0.00037968866,0.0009035902,0.0021538937],"category_scores_gemma":[0.00018103466,0.00033151684,0.00056273915,0.0003525643,0.00040499697,0.00035926557,0.00031745038,0.0015709881,0.00054208725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010180029,0.0009438284,0.00046502653,0.00010875558,0.000019125819,0.00024661573,0.000029656452,0.0002116596,0.9921991,0.00041867438,0.0002843651,0.00405508],"study_design_scores_gemma":[0.00027741172,0.0074737514,0.004469932,0.000041743213,0.000056109904,0.0014922008,0.000037511807,0.0021538057,0.97490704,0.00020222377,0.0088734245,0.000014803694],"about_ca_topic_score_codex":0.0010141588,"about_ca_topic_score_gemma":0.0014180858,"teacher_disagreement_score":0.0021538937,"about_ca_system_score_codex":0.0003883768,"about_ca_system_score_gemma":0.00047992493,"threshold_uncertainty_score":0.007205546},"labels":[],"label_agreement":null},{"id":"W1997664301","doi":"10.1172/jci19930","title":"Pre–B cell colony–enhancing factor inhibits neutrophil apoptosis in experimental inflammation and clinical sepsis","year":2004,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":594,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Hospital for Sick Children; Toronto General Hospital; University of Toronto","funders":"Canadian Institutes of Health Research; Amgen","keywords":"Apoptosis; Inflammation; Sepsis; Tumor necrosis factor alpha; Immunology; Biology; Cytokine; Downregulation and upregulation; Molecular biology; Biochemistry; Gene","score_opus":0.041278757108848874,"score_gpt":0.3440752805889518,"score_spread":0.30279652348010294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997664301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939129,0.0037575036,0.00097221974,0.00017891452,0.000042629385,0.00005058306,0.000057118566,0.00006486773,0.0009632124],"genre_scores_gemma":[0.99692106,0.0011147413,0.0010246957,0.00006858254,0.00003040402,0.000046912446,0.00024546398,0.000009345108,0.00053882983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981195,0.000087419954,0.000015855221,0.000010496414,0.00003249841,0.000041742715],"domain_scores_gemma":[0.99972314,0.00007952521,0.0000563226,0.000031672913,0.000027063648,0.0000821985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031610945,0.00045868658,0.00041019285,0.00022460152,0.00012408613,0.0002293114,0.00015896207,0.00022740582,0.00079105457],"category_scores_gemma":[0.0006257703,0.000093751616,0.00012262558,0.000116037896,0.00041230198,0.0001430022,0.00015742831,0.0008022246,0.00020053229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010020835,0.0019824193,0.0010261482,0.0002441927,0.000029358716,0.00031116742,0.000053764266,0.000405474,0.953085,0.0002790098,0.00047350422,0.03208918],"study_design_scores_gemma":[0.002033158,0.03773598,0.020350778,0.00006612372,0.00007498353,0.0022148187,0.00007574358,0.0024101855,0.9288055,0.00030711803,0.005910076,0.00001548106],"about_ca_topic_score_codex":0.00026009243,"about_ca_topic_score_gemma":0.00035485678,"teacher_disagreement_score":0.00079105457,"about_ca_system_score_codex":0.00017934457,"about_ca_system_score_gemma":0.00030656002,"threshold_uncertainty_score":0.002646327},"labels":[],"label_agreement":null},{"id":"W1997977228","doi":"10.1016/j.rinim.2013.02.002","title":"Tollip-induced down-regulation of MARCH1","year":2013,"lang":"en","type":"article","venue":"Results in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Sherbrooke; Université de Montréal","funders":"Canadian Institutes of Health Research; Virginia Polytechnic Institute and State University","keywords":"Cell biology; MHC class II; Major histocompatibility complex; MHC class I; CIITA; Endocytic cycle; Chemistry; Biology; Immunology; Antigen; Receptor; Genetics","score_opus":0.0111466420885096,"score_gpt":0.23228494127113578,"score_spread":0.22113829918262617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1997977228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897776,0.002700472,0.003730207,0.00032345593,0.00009565516,0.000041881685,0.001580685,0.00018994765,0.0015600562],"genre_scores_gemma":[0.9882897,0.0012217779,0.0027951817,0.00011004913,0.000024667754,0.00006348161,0.0025825796,0.000052193558,0.004860493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998665,0.00001726569,0.000014471467,0.00002577698,0.000028435865,0.000047516318],"domain_scores_gemma":[0.99982184,0.000032958644,0.000055358338,0.000020098027,0.00002193612,0.000047920115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014829352,0.0006610835,0.00031157502,0.00021234245,0.00018320649,0.00052427367,0.0002525775,0.00027642475,0.0025582828],"category_scores_gemma":[0.00014924095,0.00013543655,0.0003606,0.00015110445,0.00028645727,0.00022430385,0.00032758273,0.001077674,0.0009293305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010919663,0.000012389499,0.00007279505,0.00005484152,0.000003872069,0.000045022825,0.000008562939,0.00003651175,0.99890006,0.000083634026,0.00004300814,0.00063004723],"study_design_scores_gemma":[0.000012780307,0.00008809057,0.0019583094,0.000005287254,0.000011397576,0.00018058969,0.000018649353,0.00040121938,0.9947001,0.000032767643,0.0025878486,0.0000030570498],"about_ca_topic_score_codex":0.00036104256,"about_ca_topic_score_gemma":0.0003478684,"teacher_disagreement_score":0.0025582828,"about_ca_system_score_codex":0.0004073758,"about_ca_system_score_gemma":0.00021381109,"threshold_uncertainty_score":0.008558333},"labels":[],"label_agreement":null},{"id":"W1998025057","doi":"10.1159/000090001","title":"Toll-Like Receptors: Sentinels of Host Defence against Bacterial Infection","year":2005,"lang":"en","type":"review","venue":"International Archives of Allergy and Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Innate immune system; Pattern recognition receptor; Biology; Immunology; Receptor; Immune system; Acquired immune system; TLR2; Host (biology); Immunity; TLR4; Toll-like receptor; Toll; Microbiology; Genetics","score_opus":0.014328969037668195,"score_gpt":0.2683595869564145,"score_spread":0.2540306179187463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998025057","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034804526,0.9957806,0.0007148542,0.00026527746,0.00045707365,0.000011240906,0.000031203424,0.000033128814,0.0023585118],"genre_scores_gemma":[0.0029708543,0.99132663,0.0007753037,0.00028508125,0.00047170703,0.000019516912,0.00007651024,0.0000046659934,0.004069709],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998061,0.00003684948,0.000016599035,0.00003625722,0.00008131187,0.000023012428],"domain_scores_gemma":[0.9998332,0.000037525217,0.00003231327,0.0000065319336,0.000052295727,0.00003800976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050968456,0.0011200855,0.0014968186,0.0016679245,0.0002605039,0.001188194,0.0014943349,0.0016145848,0.0033692806],"category_scores_gemma":[0.00034834744,0.00025475005,0.00027136202,0.0014647641,0.00070688175,0.0016254754,0.00054122874,0.0013997202,0.0071319453],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011152815,0.00005298994,0.00030897278,0.006538307,0.000037816644,0.00044680812,0.00009859724,0.0002697498,0.016884144,0.0065809553,0.030702773,0.93796736],"study_design_scores_gemma":[0.000012918651,0.00007370847,0.0007285533,0.00083988585,0.00002820509,0.0018238559,0.00008318606,0.000060582955,0.0023120763,0.0025040975,0.9915174,0.00001547414],"about_ca_topic_score_codex":0.00040109866,"about_ca_topic_score_gemma":0.00043746972,"teacher_disagreement_score":0.0033692806,"about_ca_system_score_codex":0.00058139686,"about_ca_system_score_gemma":0.00056551036,"threshold_uncertainty_score":0.011271358},"labels":[],"label_agreement":null},{"id":"W1998065574","doi":"10.1089/jir.2010.0121","title":"Cytokine/Stromal Cell Networks and Lymphoid Tissue Environments","year":2010,"lang":"en","type":"review","venue":"Journal of Interferon & Cytokine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Stromal cell; Lymph node stromal cell; Immune system; Biology; Lymphatic system; Chemokine; Cytokine; Cell biology; Immunology; Innate lymphoid cell; Extracellular matrix; Lymphotoxin; Acquired immune system; Cancer research","score_opus":0.04515702476824561,"score_gpt":0.35700065296563516,"score_spread":0.31184362819738953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998065574","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047037003,0.9967669,0.00033272043,0.00023005126,0.00025394268,0.000005527876,0.000010688337,0.0000099654,0.0019197906],"genre_scores_gemma":[0.0020629964,0.9957926,0.00029669533,0.000123793,0.00022343578,0.000009231395,0.000020696609,0.0000015028747,0.0014690714],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986494,0.00002281801,0.00001708915,0.000028311888,0.00005022829,0.00001666678],"domain_scores_gemma":[0.9998944,0.000032583455,0.000019798443,0.000003955646,0.000031949454,0.0000173681],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003317135,0.00073872274,0.0010933138,0.0011423973,0.00029638744,0.0010484129,0.00069238595,0.0011147127,0.0018532985],"category_scores_gemma":[0.00023029497,0.00024836644,0.00019561668,0.0011967374,0.000583097,0.0012076735,0.00056675065,0.0010797755,0.0021151246],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011971416,0.0000537293,0.00033578445,0.008080849,0.000038162652,0.00091039477,0.00014686723,0.00069938117,0.02842234,0.014128988,0.015429265,0.93163466],"study_design_scores_gemma":[0.000017107488,0.000086074746,0.0013303094,0.0011398648,0.0000344744,0.0025387912,0.00014027223,0.00017389533,0.004138854,0.00446885,0.9859132,0.000018278404],"about_ca_topic_score_codex":0.00065020955,"about_ca_topic_score_gemma":0.0011598887,"teacher_disagreement_score":0.0018532985,"about_ca_system_score_codex":0.00077760377,"about_ca_system_score_gemma":0.0007854264,"threshold_uncertainty_score":0.0061998367},"labels":[],"label_agreement":null},{"id":"W1998152635","doi":"10.1016/s0198-8859(99)00133-0","title":"Increased serum-soluble interleukin-2 receptor in burn patients: characterization and effects on the immune system","year":2000,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Peripheral blood mononuclear cell; Interleukin 2; Immune system; Receptor; Endocrinology; Internal medicine; Immunology; Western blot; Interleukin; Cytokine; Biology; Andrology; Chemistry; Medicine; In vitro; Biochemistry","score_opus":0.0046375357137363495,"score_gpt":0.18992135781823194,"score_spread":0.1852838221044956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998152635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920696,0.0004545205,0.00008596172,0.000024241808,0.0000053302283,0.0000033752506,0.00002431539,0.0000036276201,0.00019165615],"genre_scores_gemma":[0.99948055,0.00016251522,0.000086534616,0.000033209886,0.000017724458,0.0000041480994,0.00006769249,0.0000017454967,0.00014594107],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988174,0.000031833722,0.000010647546,0.000018892937,0.000022386246,0.00003454424],"domain_scores_gemma":[0.99979204,0.00006616607,0.00005017273,0.000012479181,0.000022972261,0.000056182704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000156229,0.00027709152,0.00037036347,0.00042762575,0.00020450067,0.0002991779,0.00011791751,0.00034479843,0.0010878226],"category_scores_gemma":[0.0005621958,0.00015950289,0.0001904451,0.00026798644,0.00021492665,0.00018742497,0.00011028962,0.0004428734,0.00019635445],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010414693,0.0005507141,0.73356926,0.00015659447,0.00010804271,0.009590717,0.0004218461,0.00018650631,0.221206,0.00013882169,0.00032928766,0.023327462],"study_design_scores_gemma":[0.00011778502,0.0017275055,0.97027886,0.000011797764,0.00009039724,0.013538511,0.0003129267,0.00045536697,0.012889335,0.00006993176,0.00049536926,0.000012269361],"about_ca_topic_score_codex":0.0004623168,"about_ca_topic_score_gemma":0.00031564897,"teacher_disagreement_score":0.0010878226,"about_ca_system_score_codex":0.00016014968,"about_ca_system_score_gemma":0.00014720659,"threshold_uncertainty_score":0.003639102},"labels":[],"label_agreement":null},{"id":"W1998281322","doi":"10.1021/pr901124u","title":"Proteomic Profiling of Lipopolysaccharide-Activated Macrophages by Isotope Coded Affinity Tagging","year":2010,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; National Institutes of Health; Canadian Institute for Theoretical Astrophysics","keywords":"Lipopolysaccharide; Western blot; Molecular biology; TLR4; Proinflammatory cytokine; Chemistry; Gene expression; Messenger RNA; Biology; Gene; Biochemistry; Inflammation; Signal transduction; Immunology","score_opus":0.02874856376871966,"score_gpt":0.33233872107478385,"score_spread":0.3035901573060642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998281322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924034,0.0008719753,0.0053667543,0.00007022229,0.000015588465,0.00003985839,0.0006795664,0.000047843114,0.00050485844],"genre_scores_gemma":[0.9677526,0.0018078235,0.024466176,0.00018507337,0.000027616472,0.00017944514,0.0029070016,0.000063703425,0.0026107358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987066,0.000022221451,0.000008185151,0.000026547852,0.00004585177,0.000026415466],"domain_scores_gemma":[0.9998797,0.000022773109,0.000025114263,0.000011240869,0.00004033049,0.00002077781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026674173,0.00033982412,0.00037506782,0.00047017698,0.00024253165,0.00028349497,0.00017566801,0.00023002963,0.00045277659],"category_scores_gemma":[0.00023309627,0.00015123996,0.0002269819,0.00034387602,0.00018916072,0.00020301889,0.0001955613,0.00030408578,0.0003777128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047111243,0.000004344922,0.00014012378,0.000011204798,0.0000020852474,0.000010880817,0.0000071953764,0.000013702259,0.9995029,0.000009483062,0.000007581741,0.00024332534],"study_design_scores_gemma":[0.000015507107,0.00020142163,0.01865865,0.00000793368,0.000024988503,0.0003335046,0.00007825267,0.0017533635,0.9775553,0.00010630636,0.0012513587,0.0000136191575],"about_ca_topic_score_codex":0.00024223815,"about_ca_topic_score_gemma":0.00049068924,"teacher_disagreement_score":0.00047017698,"about_ca_system_score_codex":0.00018323898,"about_ca_system_score_gemma":0.00017327364,"threshold_uncertainty_score":0.0015147328},"labels":[],"label_agreement":null},{"id":"W1998386999","doi":"10.1002/art.21755","title":"Genetic variation in toll‐like receptor 9 and susceptibility to systemic lupus erythematosus","year":2006,"lang":"en","type":"article","venue":"Arthritis & Rheumatism","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Wellcome Trust","keywords":"Single-nucleotide polymorphism; Immunology; Haplotype; Lupus nephritis; Biology; Allele; Genetics; Linkage disequilibrium; Genetic variation; Genetic predisposition; Genetic association; Allele frequency; Gene; Genotype; Medicine; Disease; Internal medicine","score_opus":0.004415589842570384,"score_gpt":0.19549181064890697,"score_spread":0.1910762208063366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998386999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99916816,0.00012603604,0.00025595925,0.000034757428,0.000006252487,0.0000062899558,0.00011845108,0.0000083384975,0.00027585676],"genre_scores_gemma":[0.9994055,0.000040644663,0.00022947782,0.000013483404,0.000009838072,0.000005653119,0.000087567285,0.0000033737908,0.00020439106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99955875,0.00018797714,0.000051732583,0.0001114277,0.00005537634,0.00003468408],"domain_scores_gemma":[0.9991571,0.00040764723,0.00022778547,0.000048648137,0.00004626622,0.000112686736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059768016,0.0004429228,0.0002487947,0.0005994415,0.0002946263,0.0002496066,0.00020531754,0.00047771176,0.0046170126],"category_scores_gemma":[0.0013395675,0.00016876342,0.0002379309,0.00055030495,0.0002614235,0.00013063407,0.00021015643,0.0003538526,0.00037243968],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018028275,0.00027922352,0.96947587,0.000057591362,0.0004570201,0.0013543881,0.00032003058,0.0003147194,0.020926641,0.00022310903,0.00024741652,0.004541248],"study_design_scores_gemma":[0.00008123237,0.00057629653,0.993536,0.00002420676,0.00014535862,0.002858135,0.00010718307,0.0007720873,0.0012696753,0.00018453303,0.0004363985,0.000008933315],"about_ca_topic_score_codex":0.00063083717,"about_ca_topic_score_gemma":0.00044737343,"teacher_disagreement_score":0.0046170126,"about_ca_system_score_codex":0.000083074316,"about_ca_system_score_gemma":0.00009188456,"threshold_uncertainty_score":0.015445411},"labels":[],"label_agreement":null},{"id":"W1998598404","doi":"10.1016/j.immuni.2014.02.013","title":"Targeted Prostaglandin E2 Inhibition Enhances Antiviral Immunity through Induction of Type I Interferon and Apoptosis in Macrophages","year":2014,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":209,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McGill University; Hôtel-Dieu de Québec; Public Health Agency of Canada; Centre hospitalier universitaire de Québec; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Prostaglandin E2 receptor; Interferon; Immunity; Influenza A virus; Innate immune system; Immune system; Prostaglandin E2; Immunology; Interferon type I; Virus; Apoptosis; Virology; Receptor","score_opus":0.012778241929339275,"score_gpt":0.25067347296961756,"score_spread":0.2378952310402783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998598404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99239266,0.0021521759,0.0024405636,0.00021376679,0.0001381424,0.0000415906,0.000290341,0.00010236629,0.0022283436],"genre_scores_gemma":[0.99522024,0.0007254179,0.0008484704,0.00011152252,0.000035686167,0.00005340539,0.00020628382,0.000011076735,0.0027879633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979264,0.000036449215,0.000014526895,0.000027317898,0.000044336248,0.00008468766],"domain_scores_gemma":[0.99993336,0.000012773755,0.000014308997,0.000011219335,0.00000939788,0.00001896558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022422816,0.00031892495,0.00045766984,0.00021154339,0.00015926732,0.00033891626,0.00019165412,0.0003277658,0.0017142538],"category_scores_gemma":[0.00009920806,0.00013432148,0.00029554573,0.00013496292,0.00027604576,0.00022290635,0.00017182267,0.0009179206,0.00041506643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017120119,0.00017587777,0.0002841558,0.00007774791,0.000014903771,0.00007446494,0.000015737813,0.00015658115,0.993305,0.00018914133,0.00019158232,0.0038027095],"study_design_scores_gemma":[0.00016936129,0.0010291203,0.003326316,0.0000070367614,0.000032221113,0.00012564647,0.0000404035,0.0008012626,0.9920366,0.000121834884,0.002304631,0.0000055454693],"about_ca_topic_score_codex":0.00017320954,"about_ca_topic_score_gemma":0.0004355797,"teacher_disagreement_score":0.0017142538,"about_ca_system_score_codex":0.00023020273,"about_ca_system_score_gemma":0.00027342173,"threshold_uncertainty_score":0.0057347417},"labels":[],"label_agreement":null},{"id":"W1998612008","doi":"10.1002/art.30308","title":"Extra domain A of fibronectin primes leukotriene biosynthesis and stimulates neutrophil migration through activation of Toll-like receptor 4","year":2011,"lang":"en","type":"article","venue":"Arthritis & Rheumatism","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Pierre Elliott Trudeau Foundation","funders":"Canadian Institutes of Health Research","keywords":"Leukotriene B4; Receptor; In vivo; Chemotaxis; Arthritis; Lipid signaling; Chemistry; Cell biology; Immunology; Fibronectin; Biology; Inflammation; Biochemistry; Extracellular matrix","score_opus":0.014425719533478697,"score_gpt":0.20891589675952488,"score_spread":0.19449017722604617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998612008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996139,0.0014137115,0.0012049349,0.00008531159,0.000028660792,0.000020928448,0.00015353144,0.000036137844,0.00091775256],"genre_scores_gemma":[0.9962853,0.00061660464,0.0013814977,0.00007662393,0.000016644928,0.000020683718,0.00030438212,0.0000058009664,0.0012923781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989665,0.00003250947,0.000009486834,0.000013249198,0.000020597932,0.000027474165],"domain_scores_gemma":[0.9999114,0.000023336053,0.000018372344,0.000009386594,0.000007033627,0.000030477107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010655417,0.00030812298,0.00013162589,0.00015838668,0.0000761183,0.00014679715,0.00009038755,0.00018512775,0.0015549992],"category_scores_gemma":[0.00015767754,0.000065179156,0.00019334955,0.00006365323,0.00011937207,0.00009754662,0.00013986861,0.00030428907,0.00031428572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025863096,0.000034685552,0.00006326158,0.000026153777,0.0000026788132,0.000031273685,0.0000029379567,0.000023343186,0.99888545,0.000012840572,0.000019460485,0.00063943316],"study_design_scores_gemma":[0.00008926686,0.0019191484,0.008850969,0.000016472004,0.000017632421,0.00033124493,0.000033338558,0.00124759,0.9858992,0.00004322888,0.0015463594,0.000005573956],"about_ca_topic_score_codex":0.00037040285,"about_ca_topic_score_gemma":0.0005578527,"teacher_disagreement_score":0.0015549992,"about_ca_system_score_codex":0.00015660172,"about_ca_system_score_gemma":0.00013959347,"threshold_uncertainty_score":0.0052019954},"labels":[],"label_agreement":null},{"id":"W1998636363","doi":"10.1097/shk.0b013e3181cc064b","title":"NEUTROPHIL ELASTASE INHIBITOR IMPROVES SURVIVAL OF RATS WITH CLINICALLY RELEVANT SEPSIS","year":2010,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of British Columbia","keywords":"Medicine; Neutrophil elastase; Sepsis; Systemic inflammatory response syndrome; Internal medicine; Gastroenterology; Inflammation","score_opus":0.007538645171981122,"score_gpt":0.24179049031150834,"score_spread":0.2342518451395272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998636363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967519,0.0014374381,0.00076699344,0.00016123365,0.00006274419,0.00003236022,0.00013887246,0.00010422524,0.00054425263],"genre_scores_gemma":[0.9938111,0.001981808,0.0014490751,0.00014728656,0.000031457577,0.00007509137,0.00043202762,0.000014772286,0.0020573868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989045,0.000020546559,0.0000127450985,0.000017115472,0.000021254527,0.000037928545],"domain_scores_gemma":[0.99974066,0.000013872709,0.00008183537,0.000021780712,0.00003072203,0.00011107014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019598728,0.00083357457,0.0007630083,0.00039803793,0.00015714095,0.00019134954,0.00025470948,0.00039623698,0.0012558582],"category_scores_gemma":[0.00022012374,0.00019371067,0.00030096737,0.00012527968,0.00024241305,0.00033200203,0.00027270502,0.0011612057,0.000260454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007225347,0.0023099124,0.001136846,0.00020750647,0.00004549101,0.00018047896,0.000047895694,0.0002631426,0.9734543,0.000097072014,0.00026095242,0.0147711085],"study_design_scores_gemma":[0.0009102604,0.069113486,0.0259519,0.000111112815,0.00016598779,0.000897242,0.0003043561,0.0025127225,0.89665145,0.00021302179,0.0031269654,0.000041499046],"about_ca_topic_score_codex":0.00029855844,"about_ca_topic_score_gemma":0.00052694697,"teacher_disagreement_score":0.0012558582,"about_ca_system_score_codex":0.00014158015,"about_ca_system_score_gemma":0.00037062835,"threshold_uncertainty_score":0.004201293},"labels":[],"label_agreement":null},{"id":"W1998744639","doi":"10.1016/j.vetimm.2006.09.008","title":"Innate immune responses induced by classes of CpG oligodeoxynucleotides in ovine lymph node and blood mononuclear cells","year":2006,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; Canada Research Chairs","keywords":"CpG Oligodeoxynucleotide; TLR9; Peripheral blood mononuclear cell; Biology; Immunology; Immune system; Cytokine; CpG site; Lymph node; Acquired immune system; Innate immune system; Toll-Like Receptor 9; Gene expression; DNA methylation; In vitro; Gene","score_opus":0.009193691077451525,"score_gpt":0.2231348165811031,"score_spread":0.21394112550365157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998744639","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983188,0.0005415474,0.00038584293,0.000028340584,0.000023841438,0.000015783378,0.000090907735,0.000004573284,0.0005904247],"genre_scores_gemma":[0.99708945,0.0004568426,0.0006438855,0.0000833499,0.000021466658,0.000053306907,0.00023503316,0.0000034138566,0.0014132404],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998418,0.000030075049,0.000010521714,0.000040911582,0.000018945444,0.00005777915],"domain_scores_gemma":[0.99986565,0.000052685285,0.000020148731,0.000014256828,0.000016213135,0.000031028667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018699835,0.00020186865,0.00019541311,0.000154321,0.00015042663,0.00026493307,0.00009618557,0.00039356208,0.0014886594],"category_scores_gemma":[0.00023563967,0.00012829254,0.0001582561,0.000081515354,0.00022543375,0.00015562744,0.0001360261,0.0005058041,0.00023140029],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007989869,0.000029427414,0.000516516,0.00003763702,0.000003686731,0.00005674755,0.000043168424,0.000033280758,0.9972139,0.00004425455,0.000024532435,0.0011979245],"study_design_scores_gemma":[0.00019180331,0.004428521,0.042985227,0.000047216785,0.00006950719,0.00060372625,0.0004605778,0.0009803921,0.9467991,0.0001838094,0.0032324367,0.000017653774],"about_ca_topic_score_codex":0.00058489066,"about_ca_topic_score_gemma":0.0012838066,"teacher_disagreement_score":0.0014886594,"about_ca_system_score_codex":0.00018686842,"about_ca_system_score_gemma":0.00018034568,"threshold_uncertainty_score":0.0049800277},"labels":[],"label_agreement":null},{"id":"W1998784632","doi":"10.1007/s003350010131","title":"Identification and characterization of naturally occurring variants of the macrophage scavenger receptor (SR-A)","year":2000,"lang":"en","type":"article","venue":"Mammalian Genome","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal General Hospital; McGill University","funders":"National Heart, Lung, and Blood Institute","keywords":"Biology; Scavenger receptor; Receptor; Haplotype; Molecular biology; Monoclonal antibody; Cell surface receptor; Internalization; Antibody; Genetics; Genotype; Biochemistry; Gene","score_opus":0.005226054859461045,"score_gpt":0.19720967894798555,"score_spread":0.1919836240885245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998784632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99362963,0.0008251418,0.004376431,0.000109976885,0.000043326647,0.0000150093165,0.0006278808,0.00003467365,0.00033794757],"genre_scores_gemma":[0.9923348,0.00043495506,0.004103874,0.00009733379,0.000030746807,0.000018073599,0.0020224222,0.000050888946,0.00090687734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998603,0.000033116215,0.00001341773,0.00004085222,0.00002841216,0.00002383057],"domain_scores_gemma":[0.99960726,0.00012935999,0.00011421915,0.000053359065,0.000034794266,0.000061020546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017502948,0.00023744594,0.00025544662,0.0002653226,0.00017269173,0.00032595408,0.00032714455,0.00035165728,0.00090921886],"category_scores_gemma":[0.00050613226,0.00014976213,0.00032517937,0.00021983743,0.00028083895,0.00014002234,0.00022448035,0.00068483053,0.00039938116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016453721,0.000020786749,0.0008283821,0.000020128005,0.000014708924,0.00014434604,0.000038711743,0.00004462996,0.9971982,0.00019151087,0.000037025584,0.0012969716],"study_design_scores_gemma":[0.000120925804,0.0016481796,0.07346251,0.000034273362,0.00031843004,0.010863649,0.00041889123,0.003377439,0.89031893,0.0008841449,0.018495336,0.00005737852],"about_ca_topic_score_codex":0.00038893777,"about_ca_topic_score_gemma":0.0004391234,"teacher_disagreement_score":0.00090921886,"about_ca_system_score_codex":0.00014455317,"about_ca_system_score_gemma":0.0001415511,"threshold_uncertainty_score":0.003041625},"labels":[],"label_agreement":null},{"id":"W1998805856","doi":"10.1006/geno.2000.6115","title":"Cloning and Characterization of the Murine Toll-like Receptor 5 (Tlr5) Gene: Sequence and mRNA Expression Studies in Salmonella-Susceptible MOLF/Ei Mice","year":2000,"lang":"en","type":"article","venue":"Genomics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":134,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal General Hospital","funders":"","keywords":"Biology; TLR5; Molecular biology; Transmembrane domain; Genetics; Gene; Sequence analysis; Toll-like receptor; Receptor; Innate immune system","score_opus":0.02120594440496888,"score_gpt":0.24585506873446508,"score_spread":0.2246491243294962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998805856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97787434,0.0016628593,0.013840236,0.0002887627,0.000043491174,0.0000884648,0.0048215697,0.00018075478,0.001199577],"genre_scores_gemma":[0.9470952,0.0023919928,0.023904433,0.00034167993,0.000043299555,0.00015478746,0.013702167,0.00036907484,0.0119972285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997856,0.000020976757,0.000023680179,0.00006135989,0.000043075506,0.00006538737],"domain_scores_gemma":[0.99964833,0.000054226188,0.00013430559,0.00002798084,0.00003635928,0.00009884901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023084036,0.0005414173,0.00031489006,0.0007348753,0.0003100188,0.0003633394,0.00040712793,0.0005089612,0.0014754343],"category_scores_gemma":[0.00016987354,0.0004240644,0.0006193627,0.0002622748,0.0003330628,0.00030702128,0.00021806463,0.00088698056,0.001021872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012668023,0.00001849634,0.00010624183,0.000025453772,0.0000035969297,0.000033962533,0.00001385313,0.000042662145,0.99911076,0.00010772621,0.000020030291,0.00039045291],"study_design_scores_gemma":[0.000043592005,0.00028675477,0.0071443133,0.000019767274,0.000053991967,0.00031255858,0.000079027865,0.0007155752,0.98820376,0.00008988673,0.003038662,0.000012093315],"about_ca_topic_score_codex":0.0009900196,"about_ca_topic_score_gemma":0.0018793377,"teacher_disagreement_score":0.0014754343,"about_ca_system_score_codex":0.0004924245,"about_ca_system_score_gemma":0.00022212179,"threshold_uncertainty_score":0.004935801},"labels":[],"label_agreement":null},{"id":"W1998879678","doi":"10.1186/1465-9921-13-91","title":"Fas-deficient mice have impaired alveolar neutrophil recruitment and decreased expression of anti-KC autoantibody:KC complexes in a model of acute lung injury","year":2012,"lang":"en","type":"article","venue":"Respiratory Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Fas ligand; CXCL1; Lung; Medicine; Immunology; Myeloperoxidase; Respiratory system; Immune system; Apoptosis; Ventilation (architecture); Tumor necrosis factor alpha; Endocrinology; Internal medicine; Inflammation; Chemistry; Chemokine; Programmed cell death","score_opus":0.11110491417047683,"score_gpt":0.38258982019980103,"score_spread":0.2714849060293242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998879678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923618,0.0021742198,0.0031805988,0.00026296734,0.000054906886,0.00006639446,0.00089527783,0.00026366595,0.0007402032],"genre_scores_gemma":[0.9888403,0.0010750169,0.0043543354,0.00016846164,0.000028388702,0.00016206982,0.00087053375,0.00007916011,0.0044217384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99940896,0.000080100835,0.00010145393,0.0001446052,0.00016419486,0.0001006939],"domain_scores_gemma":[0.99910945,0.00005190166,0.00043843157,0.00005425974,0.00006311094,0.0002827902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003762374,0.0012466557,0.00065807055,0.0010401272,0.00026303888,0.00055747986,0.00058013597,0.0012538461,0.0033013239],"category_scores_gemma":[0.00028897237,0.0004054383,0.0004048904,0.00026087722,0.00069194,0.0006187461,0.00029093286,0.0016384942,0.0011044687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005009017,0.0001156632,0.00028849018,0.000083136605,0.000010387484,0.00016466907,0.000026981756,0.00005856586,0.99799734,0.00006356361,0.00004317894,0.00064711116],"study_design_scores_gemma":[0.00018726639,0.002409095,0.010466297,0.000059099715,0.000065973894,0.003094754,0.000092158545,0.0009846243,0.98089004,0.00015361246,0.001577384,0.000019673555],"about_ca_topic_score_codex":0.00033322634,"about_ca_topic_score_gemma":0.00036199274,"teacher_disagreement_score":0.0033013239,"about_ca_system_score_codex":0.00046864757,"about_ca_system_score_gemma":0.00027799862,"threshold_uncertainty_score":0.011044025},"labels":[],"label_agreement":null},{"id":"W1998912113","doi":"10.1007/s00280-015-2682-2","title":"Open-label phase 1b study of FOLFIRI plus cetuximab plus IMO-2055 in patients with colorectal cancer who have progressed following chemotherapy for advanced or metastatic disease","year":2015,"lang":"en","type":"article","venue":"Cancer Chemotherapy and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Georgetown Hospital","funders":"National Center for Advancing Translational Sciences; National Center for Research Resources; EMD Serono; National Institutes of Health","keywords":"Medicine; FOLFIRI; Cetuximab; Irinotecan; Colorectal cancer; Gastroenterology; Folinic acid; Neutropenia; Internal medicine; Adverse effect; Phases of clinical research; Chemotherapy; Pharmacology; Cancer","score_opus":0.04090778995048399,"score_gpt":0.3827514266994293,"score_spread":0.3418436367489453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998912113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98989165,0.0019272342,0.00068284274,0.0007021414,0.00031792984,0.0028708396,0.0014268302,0.0001394257,0.0020410984],"genre_scores_gemma":[0.98449486,0.0018500418,0.001957333,0.0011794163,0.000297034,0.002731,0.0025684026,0.000043186283,0.0048787175],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99953735,0.00016806535,0.000015854192,0.00010152998,0.000029159151,0.00014798908],"domain_scores_gemma":[0.9991779,0.00011648708,0.00012291502,0.0000647135,0.00004637833,0.0004716422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013976371,0.0021516965,0.0034434618,0.0005851321,0.0007010214,0.0013519247,0.0011699721,0.0020180466,0.0069451765],"category_scores_gemma":[0.00094193954,0.0010247016,0.0021877643,0.0005146938,0.0017350479,0.0015409823,0.0004250941,0.0054258495,0.0017311004],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9017195,0.05244976,0.001586942,0.00042677336,0.00068724656,0.00008472226,0.00014552366,0.0013065437,0.008649384,0.00016388964,0.0018038551,0.030976001],"study_design_scores_gemma":[0.6360468,0.3556071,0.0045362,0.000021728805,0.0002949779,0.000075440264,0.0000650919,0.0006875652,0.0010927003,0.0001351487,0.0014089494,0.000028308128],"about_ca_topic_score_codex":0.0024234625,"about_ca_topic_score_gemma":0.0071864147,"teacher_disagreement_score":0.0069451765,"about_ca_system_score_codex":0.0014741155,"about_ca_system_score_gemma":0.0020479339,"threshold_uncertainty_score":0.02323389},"labels":[],"label_agreement":null},{"id":"W1999672519","doi":"10.1111/j.1750-3639.2002.tb00445.x","title":"The Clinical Course of Experimental Autoimmune Encephalomyelitis is Associated with a Profound and Sustained Transcriptional Activation of the Genes Encoding Toll‐like Receptor 2 and CD14 in the Mouse CNS","year":2002,"lang":"en","type":"article","venue":"Brain Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Medical Research Council; National Multiple Sclerosis Society","keywords":"Myelin oligodendrocyte glycoprotein; Experimental autoimmune encephalomyelitis; TLR2; Immunology; Biology; Encephalomyelitis; Choroid plexus; Innate immune system; Multiple sclerosis; Proinflammatory cytokine; CD14; Immune system; Central nervous system; Neuroscience; Inflammation","score_opus":0.02226046187187095,"score_gpt":0.2697722274686374,"score_spread":0.24751176559676644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999672519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903148,0.00541896,0.0014642776,0.00018567832,0.00006130962,0.00011081513,0.00038296412,0.000119772085,0.0019415722],"genre_scores_gemma":[0.99201983,0.0031208303,0.0019393057,0.00021244274,0.000082598475,0.00012192813,0.00051368354,0.00001642215,0.001972991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974304,0.000040707197,0.000030349267,0.000057458547,0.00007283564,0.000055579734],"domain_scores_gemma":[0.99967325,0.000021461312,0.00012839459,0.000017646522,0.00004631728,0.000112926165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024707947,0.00092283764,0.0005010305,0.00051948015,0.0002498416,0.0003086854,0.000125707,0.0006975453,0.0010609758],"category_scores_gemma":[0.0002380364,0.00022171617,0.00024823248,0.00023565654,0.00043993772,0.00027215463,0.00028636903,0.0012077971,0.00037137145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052511337,0.00017297265,0.004399516,0.00014400248,0.000022031078,0.0005788523,0.000065901986,0.000033699365,0.99104846,0.00005928309,0.00009026687,0.002859915],"study_design_scores_gemma":[0.00031923025,0.008987279,0.51627797,0.00021446265,0.00020170213,0.014547089,0.0003893201,0.0008594642,0.44913232,0.0005646188,0.008439345,0.000067261964],"about_ca_topic_score_codex":0.00028861882,"about_ca_topic_score_gemma":0.00049708766,"teacher_disagreement_score":0.0010609758,"about_ca_system_score_codex":0.00028521701,"about_ca_system_score_gemma":0.00023369466,"threshold_uncertainty_score":0.0035492778},"labels":[],"label_agreement":null},{"id":"W1999716625","doi":"10.1074/jbc.m112.378687","title":"CD8 Lineage-specific Regulation of Interleukin-7 Receptor Expression by the Transcriptional Repressor Gfi1","year":2012,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Fogarty International Center","keywords":"Biology; Repressor; Interleukin-7 receptor; Enhancer; Transcription factor; Molecular biology; Transcriptional regulation; CD8; Regulation of gene expression; Cell biology; T cell; Gene; Genetics; IL-2 receptor; Immune system","score_opus":0.024158259303017862,"score_gpt":0.23882765091205468,"score_spread":0.2146693916090368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999716625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98890543,0.0025876204,0.004293786,0.0001672159,0.000038707472,0.000023594392,0.0007628056,0.00016841925,0.003052491],"genre_scores_gemma":[0.99095225,0.000958911,0.0032905545,0.000081767306,0.000015442032,0.000032379332,0.0009461369,0.00004565199,0.0036768964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998466,0.000017366276,0.000008046471,0.000043815646,0.000039282157,0.000044760352],"domain_scores_gemma":[0.9998933,0.000013852141,0.000042116888,0.000011494148,0.000013275866,0.000025970734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077116754,0.0003035314,0.00015042476,0.00020528465,0.00010443388,0.00027026725,0.00016150236,0.00017163536,0.0010476635],"category_scores_gemma":[0.000102287566,0.00010656779,0.00011842255,0.000113808965,0.00026867617,0.00011347153,0.00020399102,0.00054627436,0.0005464155],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020939508,0.0000029450564,0.00006835773,0.000006907752,4.33211e-7,0.000009799972,0.0000033005977,0.0000081827575,0.9994848,0.000041176358,0.000013466098,0.00033966888],"study_design_scores_gemma":[0.0000076288497,0.0000555416,0.0036952966,0.0000042692877,0.000004018929,0.00013185904,0.000016064252,0.00035038384,0.99322695,0.00004226966,0.0024636309,0.0000021371727],"about_ca_topic_score_codex":0.0003779352,"about_ca_topic_score_gemma":0.0005824871,"teacher_disagreement_score":0.0010476635,"about_ca_system_score_codex":0.00033580762,"about_ca_system_score_gemma":0.00017639024,"threshold_uncertainty_score":0.0035048127},"labels":[],"label_agreement":null},{"id":"W1999838288","doi":"10.1074/jbc.m606721200","title":"Essential Role for Caspase-8 in Toll-like Receptors and NFκB Signaling","year":2007,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Cell biology; Biology; IκB kinase; Apoptosis; Caspase 8; NF-κB; Signal transduction; Caspase; TLR4; Toll-like receptor; Receptor; Innate immune system; Programmed cell death; Cancer research; Immunology; Immune system; Biochemistry","score_opus":0.01133170648467749,"score_gpt":0.24725089430642713,"score_spread":0.23591918782174964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999838288","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95746607,0.02265473,0.013813167,0.0007159509,0.00012142557,0.00004863352,0.0003965943,0.00029449558,0.004488971],"genre_scores_gemma":[0.9880336,0.0029385297,0.006276035,0.00004195199,0.00003238523,0.00003076045,0.0002604477,0.000015212708,0.0023710632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997863,0.00004820341,0.000024243234,0.000039945568,0.000056140016,0.000045187444],"domain_scores_gemma":[0.999764,0.000026816973,0.00006548812,0.000030557705,0.000048516034,0.00006471393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025733572,0.0005512609,0.00021030816,0.00028709378,0.00023888129,0.0004329506,0.0002970157,0.00037319356,0.0011053692],"category_scores_gemma":[0.00030612253,0.00016655412,0.00018388835,0.00011275469,0.0003172761,0.00046604016,0.00042678355,0.0005650446,0.0006874645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046763336,0.00005852272,0.00044833779,0.00012291603,0.000006318869,0.00030498614,0.000023587256,0.00016429106,0.99039173,0.0010569623,0.000105313884,0.0068494035],"study_design_scores_gemma":[0.0001574902,0.00040365657,0.005920226,0.000037643105,0.000021793308,0.003360424,0.000059762402,0.0019808386,0.9739237,0.0027527998,0.011367484,0.000014304345],"about_ca_topic_score_codex":0.00011037285,"about_ca_topic_score_gemma":0.000114447575,"teacher_disagreement_score":0.0011053692,"about_ca_system_score_codex":0.0004203137,"about_ca_system_score_gemma":0.00028295544,"threshold_uncertainty_score":0.0036978126},"labels":[],"label_agreement":null},{"id":"W1999907389","doi":"10.1371/journal.pone.0040138","title":"Milk Matters: Soluble Toll-Like Receptor 2 (sTLR2) in Breast Milk Significantly Inhibits HIV-1 Infection and Inflammation","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development; Canadian Institutes of Health Research; Bill and Melinda Gates Foundation; Ontario HIV Treatment Network; McMaster University; Children's Hospital Los Angeles","keywords":"TLR2; Inflammation; Innate immune system; Breast milk; Immunology; Receptor; Immune system; Biology; Medicine; Virology; Internal medicine","score_opus":0.018957290286353342,"score_gpt":0.20715583464078394,"score_spread":0.1881985443544306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1999907389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9822286,0.01131095,0.0020526957,0.0004847495,0.00015914004,0.000042111093,0.0007456347,0.00034390055,0.0026323462],"genre_scores_gemma":[0.9871055,0.0026875546,0.002791738,0.00020759169,0.000067167115,0.00005051131,0.0013521021,0.000037583024,0.005700269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997968,0.000042959728,0.000015667454,0.000032571977,0.000057670197,0.000054321616],"domain_scores_gemma":[0.99994326,0.000007275326,0.00001670714,0.0000056384524,0.000008291902,0.000018754612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015803533,0.0003924385,0.0003836204,0.00018118921,0.00011927149,0.00038000246,0.00020840923,0.00034165755,0.0020037652],"category_scores_gemma":[0.00014699549,0.000117722586,0.00023414163,0.00017189856,0.00017041978,0.00016942949,0.000244288,0.00060895516,0.0006871658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041997916,0.00007995028,0.0001668312,0.000081195925,0.0000103206485,0.000030170862,0.000008419058,0.000039453593,0.99574935,0.000030721683,0.00014260795,0.003240954],"study_design_scores_gemma":[0.00006246977,0.0010848312,0.003165734,0.000011448292,0.00003132896,0.00030493934,0.000018576777,0.00038598027,0.98953456,0.000018266424,0.005379051,0.000002777762],"about_ca_topic_score_codex":0.00030933443,"about_ca_topic_score_gemma":0.0005653519,"teacher_disagreement_score":0.0020037652,"about_ca_system_score_codex":0.00018836015,"about_ca_system_score_gemma":0.0002018729,"threshold_uncertainty_score":0.0067032576},"labels":[],"label_agreement":null},{"id":"W2000022183","doi":"10.1074/jbc.m402111200","title":"The Development of Early Host Response to Pseudomonas aeruginosa Lung Infection Is Critically Dependent on Myeloid Differentiation Factor 88 in Mice","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Pseudomonas aeruginosa; Myeloid; Host (biology); Immunology; Lung infection; Biology; Critically ill; Lung; Host response; Myeloid cells; Microbiology; Pulmonary infection; Immune system; Medicine; Bacteria; Genetics; Internal medicine","score_opus":0.013881105860828174,"score_gpt":0.2545575944345929,"score_spread":0.24067648857376475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000022183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868307,0.0023957514,0.0049841683,0.00051857036,0.000087245266,0.00027399568,0.0020039561,0.00047553983,0.0024299538],"genre_scores_gemma":[0.97730947,0.002522329,0.0069835056,0.0004313888,0.000054492288,0.0008176194,0.0022326703,0.000233283,0.009415126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992994,0.00012359649,0.00009269537,0.00015613768,0.00014438902,0.00018376122],"domain_scores_gemma":[0.99925977,0.000051845007,0.00029354668,0.00008860559,0.000037992922,0.00026819497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004528655,0.0012558564,0.00073701196,0.0015208466,0.00044582319,0.00078369264,0.0007810966,0.0013473236,0.003008193],"category_scores_gemma":[0.0003015596,0.00088760786,0.0008906803,0.00032941104,0.0008387032,0.0006690766,0.00080265163,0.0025252395,0.0015700624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016148563,0.0005199632,0.0006361288,0.000101444064,0.000020124646,0.0002625804,0.000062013634,0.000114248985,0.9939037,0.0003762279,0.00013402906,0.0022546737],"study_design_scores_gemma":[0.0009069365,0.0062402575,0.029260946,0.00017921458,0.00016330859,0.0028709234,0.00023829179,0.0027490708,0.9459775,0.00064743974,0.010706674,0.000059543414],"about_ca_topic_score_codex":0.00045808076,"about_ca_topic_score_gemma":0.0006222777,"teacher_disagreement_score":0.003008193,"about_ca_system_score_codex":0.0007239463,"about_ca_system_score_gemma":0.00047959265,"threshold_uncertainty_score":0.01006341},"labels":[],"label_agreement":null},{"id":"W2000189931","doi":"10.1164/rccm.200803-462oc","title":"Toll-like Receptor 1 Polymorphisms Affect Innate Immune Responses and Outcomes in Sepsis","year":2008,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":245,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute","keywords":"Sepsis; Medicine; Odds ratio; Immunology; Single-nucleotide polymorphism; Organ dysfunction; Intensive care; SNP; Innate immune system; Internal medicine; Immune system; Biology; Genotype; Genetics; Gene; Intensive care medicine","score_opus":0.015504662263318541,"score_gpt":0.29176792951314906,"score_spread":0.2762632672498305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000189931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988863,0.00062883855,0.00013792886,0.00007807114,0.0000053764693,0.000008118311,0.00012279458,0.000004599689,0.00012797824],"genre_scores_gemma":[0.9993672,0.00014561866,0.00024407917,0.000043653534,0.000013784223,0.000010025969,0.0001034151,0.0000015729372,0.00007069313],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996313,0.00015425141,0.00004223833,0.00009167271,0.000046674806,0.000033839264],"domain_scores_gemma":[0.9989379,0.00038074164,0.00044824564,0.000042446754,0.000055971126,0.00013470768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083828927,0.00050745637,0.00029743143,0.0003830067,0.0001984355,0.00032061295,0.00027719114,0.00064677844,0.001504374],"category_scores_gemma":[0.0020181676,0.00020345257,0.0002698288,0.0003701453,0.00035551251,0.00016521788,0.00029718791,0.0004420269,0.00018784686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029354303,0.00018995772,0.97555166,0.0001225393,0.00026059922,0.0004990764,0.00009979472,0.0005940976,0.013290466,0.000072981304,0.00020633958,0.006177061],"study_design_scores_gemma":[0.00014049548,0.0007220135,0.99514467,0.00003122549,0.00019264738,0.0012665667,0.000043888343,0.0006279953,0.0014745354,0.00016492247,0.00017984303,0.000011142553],"about_ca_topic_score_codex":0.0004559672,"about_ca_topic_score_gemma":0.00037096452,"teacher_disagreement_score":0.001504374,"about_ca_system_score_codex":0.00016586979,"about_ca_system_score_gemma":0.00019308628,"threshold_uncertainty_score":0.005032599},"labels":[],"label_agreement":null},{"id":"W2000391394","doi":"10.1016/j.vetimm.2009.08.017","title":"Phagocytosis in pup and adult harbour, grey and harp seals","year":2009,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Fisheries and Oceans Canada","funders":"","keywords":"Phagocytosis; Biology; Seal (emblem); HARP; Phoca; Harbour; Lactation; Zoology; Immunology; Pregnancy","score_opus":0.011075397524289505,"score_gpt":0.2423832322284168,"score_spread":0.23130783470412727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000391394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99930835,0.00014110254,0.000027317297,0.000012506257,0.0000023117884,0.0000036207887,0.00005037917,0.0000015311031,0.00045296265],"genre_scores_gemma":[0.99793774,0.00011233892,0.00006061797,0.000022502802,0.0000037782534,0.0000086085,0.00013555818,0.0000020181956,0.0017167224],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990094,0.000012255871,0.0000052810665,0.000024413677,0.000017930257,0.000039252012],"domain_scores_gemma":[0.9997814,0.00003647029,0.000047122845,0.000017881757,0.000043348053,0.000073742165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015499773,0.00014690762,0.0003172997,0.00028045874,0.00046632657,0.00037697516,0.00016807081,0.00044539457,0.0014099362],"category_scores_gemma":[0.00053769647,0.0002361054,0.0001673721,0.00008152321,0.00034883813,0.0003083507,0.00032647437,0.00041732093,0.00048737513],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008606553,0.00047089523,0.4315273,0.00023690579,0.0000660225,0.0032200464,0.006171973,0.00025160116,0.52935904,0.0010464014,0.0009747434,0.018068595],"study_design_scores_gemma":[0.000009848309,0.0008520705,0.9903951,0.000010548788,0.000012130169,0.000856833,0.0009593238,0.00025381736,0.006085752,0.00010128078,0.00045636678,0.00000702745],"about_ca_topic_score_codex":0.0035487912,"about_ca_topic_score_gemma":0.0042193066,"teacher_disagreement_score":0.0035487912,"about_ca_system_score_codex":0.00028560916,"about_ca_system_score_gemma":0.00022343511,"threshold_uncertainty_score":0.007056296},"labels":[],"label_agreement":null},{"id":"W2000708054","doi":"10.1182/blood.v99.3.729a","title":"Neutrophils at the crossroads of cytokine and RA receptors","year":2002,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Receptor; Cytokine; Immunology; Medicine; Biology; Internal medicine","score_opus":0.009599349082399037,"score_gpt":0.19844918942300901,"score_spread":0.18884984034060998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000708054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8615954,0.07457556,0.028740624,0.0042594825,0.00031173887,0.00013917667,0.00019908285,0.00019122673,0.029987786],"genre_scores_gemma":[0.9699757,0.010904236,0.0067817704,0.00029217935,0.00015422753,0.000042531046,0.00010307763,0.0000064066576,0.011739851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996001,0.00012929211,0.000017972432,0.000050891624,0.00009005957,0.00011164558],"domain_scores_gemma":[0.99991584,0.000011637844,0.000017305709,0.000008371399,0.00002109004,0.000025741894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029770233,0.00021476728,0.00025517595,0.00037747432,0.00031263966,0.0007188791,0.0001784497,0.00053662254,0.0013852286],"category_scores_gemma":[0.0002124449,0.00015876985,0.00011976177,0.00014200062,0.00022749754,0.0007430303,0.0006371876,0.00056145276,0.00059384597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006333985,0.00006104001,0.0037239126,0.0001805695,0.000012329547,0.0013724545,0.0003829177,0.00023443658,0.92442787,0.024926342,0.0012816109,0.042762987],"study_design_scores_gemma":[0.0002532881,0.0026733468,0.073052384,0.00057692133,0.00011016334,0.013980296,0.0021045106,0.0047779563,0.6425141,0.0369953,0.22288899,0.00007268975],"about_ca_topic_score_codex":0.00034223698,"about_ca_topic_score_gemma":0.00065132877,"teacher_disagreement_score":0.0013852286,"about_ca_system_score_codex":0.0002866209,"about_ca_system_score_gemma":0.0002049723,"threshold_uncertainty_score":0.0046340823},"labels":[],"label_agreement":null},{"id":"W2000825465","doi":"10.1074/jbc.m105676200","title":"Co-localization of Leukotriene A4Hydrolase with 5-Lipoxygenase in Nuclei of Alveolar Macrophages and Rat Basophilic Leukemia Cells but Not Neutrophils","year":2001,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Heart, Lung, and Blood Institute","keywords":"Leukotriene B4; Leukotriene; Cytoplasm; Arachidonate 5-lipoxygenase; Leukotriene C4; Cytosol; Leukotriene D4; Lipoxygenase; Arachidonic acid; Chemistry; Biochemistry; Molecular biology; Biology; Enzyme; Immunology; Inflammation","score_opus":0.010075095621116168,"score_gpt":0.21900769003316475,"score_spread":0.2089325944120486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000825465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98048544,0.004561877,0.012040443,0.0000938813,0.000042144977,0.0000320009,0.0003156087,0.00010666844,0.002321858],"genre_scores_gemma":[0.9860911,0.0015686265,0.008527995,0.000041981544,0.00001925183,0.0000800696,0.00052756304,0.00002899757,0.0031144556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997868,0.000031742366,0.000017066188,0.00006414654,0.000056601995,0.000043705775],"domain_scores_gemma":[0.9997967,0.000030065863,0.000055309607,0.000033913162,0.00004862471,0.00003543611],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017211719,0.00032764053,0.00025401587,0.00046266487,0.00026015865,0.00031865813,0.00022000498,0.00027571566,0.0010303108],"category_scores_gemma":[0.00017006753,0.0002378633,0.00024588377,0.00023018826,0.0003466564,0.00035854464,0.00044867684,0.0002427822,0.00071273424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059876318,0.000004835141,0.00041937508,0.000028556417,0.000004194694,0.0000728197,0.000034140514,0.00000748957,0.99880576,0.000081363476,0.0000055380738,0.00047610782],"study_design_scores_gemma":[0.000025607911,0.00026293166,0.026231155,0.000018950894,0.000040997613,0.0011879939,0.00023902717,0.0005235877,0.96866566,0.00016724097,0.0026223788,0.000014466827],"about_ca_topic_score_codex":0.0012531787,"about_ca_topic_score_gemma":0.0013365943,"teacher_disagreement_score":0.0012531787,"about_ca_system_score_codex":0.0002933457,"about_ca_system_score_gemma":0.00031194356,"threshold_uncertainty_score":0.0034466982},"labels":[],"label_agreement":null},{"id":"W2001256354","doi":"10.1074/jbc.275.7.4670","title":"Identification of Two Major Sites in the Type I Interleukin-1 Receptor Cytoplasmic Region Responsible for Coupling to Pro-inflammatory Signaling Pathways","year":2000,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":309,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"","keywords":"Alanine scanning; Biology; Signal transduction; Cell biology; Receptor; Transcription factor; Mutant; Kinase; Genetics; Mutagenesis; Gene","score_opus":0.030699311023387757,"score_gpt":0.2687575977179701,"score_spread":0.23805828669458234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001256354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940352,0.00052264624,0.004622311,0.00005242224,0.000019519592,0.000027759848,0.00013374124,0.00003248772,0.00055398606],"genre_scores_gemma":[0.99362904,0.00021258248,0.005210656,0.000064954744,0.000008674536,0.000026304951,0.00035254323,0.0000094522875,0.00048574514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998754,0.000020059351,0.0000099997005,0.000027842161,0.000031029176,0.000035645902],"domain_scores_gemma":[0.9997352,0.00005595963,0.00008033663,0.000025695723,0.000026687821,0.000076143784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014093777,0.00043606077,0.00026108552,0.00015269086,0.00010395617,0.00026555138,0.00029315642,0.0005537249,0.0010627143],"category_scores_gemma":[0.00030140497,0.00016810976,0.0003526258,0.00008339204,0.0002473043,0.00015698864,0.000170099,0.00044708632,0.00069246016],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017750512,0.000019624418,0.0005605454,0.00002267846,0.0000027170106,0.00012095807,0.000010943081,0.00008699763,0.9980971,0.00015161041,0.00001601245,0.00073321175],"study_design_scores_gemma":[0.0000904059,0.00051855255,0.03184751,0.000029999828,0.000039937924,0.0032652654,0.00005024294,0.0024928208,0.9594034,0.00025906207,0.001976489,0.00002629206],"about_ca_topic_score_codex":0.0003667689,"about_ca_topic_score_gemma":0.00032080617,"teacher_disagreement_score":0.0010627143,"about_ca_system_score_codex":0.00029494334,"about_ca_system_score_gemma":0.00034985357,"threshold_uncertainty_score":0.0035551786},"labels":[],"label_agreement":null},{"id":"W2001263038","doi":"10.1016/j.cellimm.2010.10.008","title":"Novel antagonist antibody to TLR3 blocks poly(I:C)-induced inflammation in vivo and in vitro","year":2010,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"","keywords":"TLR3; Inflammation; In vivo; Biology; Innate immune system; Molecular biology; Chemokine; Monoclonal antibody; Cell biology; Toll-like receptor; Immune system; Antibody; Immunology","score_opus":0.0070228002137853775,"score_gpt":0.23299925406720826,"score_spread":0.22597645385342288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001263038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866746,0.002766392,0.006018951,0.00031381517,0.00019693378,0.000120788915,0.0003860994,0.00028500534,0.0032374216],"genre_scores_gemma":[0.98930246,0.001647945,0.0042748535,0.00024481217,0.00011172544,0.00016432242,0.0009698487,0.00003947324,0.0032447393],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974424,0.0000429315,0.000014986674,0.00002822668,0.000038186692,0.00013139169],"domain_scores_gemma":[0.99983776,0.00004147649,0.000031414726,0.00002324797,0.000023946379,0.000042116153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033814844,0.0007337134,0.00050900923,0.0003276424,0.00032139025,0.00031791558,0.0005211316,0.0005553521,0.0024414072],"category_scores_gemma":[0.00020679204,0.00025615,0.00049317937,0.00019557621,0.00030527293,0.00023831073,0.00022816249,0.0017189542,0.0008998369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008714783,0.00034849922,0.000102306905,0.000070748225,0.000017898788,0.000059161808,0.00001334977,0.00013192171,0.99535596,0.00013007266,0.00024428873,0.002654249],"study_design_scores_gemma":[0.00047451718,0.0033605734,0.0023722171,0.000015847798,0.00007785562,0.0005398922,0.000025044998,0.001701323,0.98787177,0.00008911884,0.0034597088,0.000012221402],"about_ca_topic_score_codex":0.00082125404,"about_ca_topic_score_gemma":0.0014497277,"teacher_disagreement_score":0.0024414072,"about_ca_system_score_codex":0.00038279445,"about_ca_system_score_gemma":0.00055979786,"threshold_uncertainty_score":0.008167326},"labels":[],"label_agreement":null},{"id":"W2001809367","doi":"10.1002/eji.200737429","title":"IRAK‐4 kinase activity is required for IRAK‐4‐dependent innate and adaptive immune responses","year":2008,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Biology; Innate immune system; Immune system; Kinase; TLR4; Acquired immune system; Lipopolysaccharide; Cell biology; Immunology","score_opus":0.03076389123853226,"score_gpt":0.24746127742293392,"score_spread":0.21669738618440165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001809367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916857,0.0026453952,0.0033350592,0.00016412979,0.00007032224,0.000020687894,0.00062731525,0.00016212527,0.0012892357],"genre_scores_gemma":[0.9932655,0.00097531057,0.001942556,0.0000622897,0.000020390113,0.000037490176,0.0011971238,0.000035675086,0.0024636888],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999665,0.000047072448,0.000041830783,0.00006400631,0.000083007064,0.00009897328],"domain_scores_gemma":[0.9995751,0.000032940923,0.00019623747,0.000057968035,0.000040667575,0.00009711467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019498299,0.0005963083,0.00040753075,0.00038360266,0.00023742398,0.0003996927,0.00041106303,0.0003962761,0.0017141316],"category_scores_gemma":[0.00036641958,0.00033707844,0.0004293916,0.00020307428,0.00047337782,0.00038205457,0.00040748337,0.00067537185,0.00105216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022941583,0.00002105743,0.0004795827,0.00004793817,0.000009173711,0.000100133984,0.000005646006,0.00008877541,0.9980813,0.00009391264,0.000041650394,0.00080144894],"study_design_scores_gemma":[0.00010009959,0.00031594982,0.050865185,0.000021998589,0.00006986085,0.0015160516,0.00007404845,0.0018485783,0.9382965,0.00051662634,0.006344936,0.00003006845],"about_ca_topic_score_codex":0.00039090094,"about_ca_topic_score_gemma":0.00031727005,"teacher_disagreement_score":0.0017141316,"about_ca_system_score_codex":0.0004398899,"about_ca_system_score_gemma":0.00041109108,"threshold_uncertainty_score":0.005734384},"labels":[],"label_agreement":null},{"id":"W2002252836","doi":"10.1097/00003246-200103000-00020","title":"Effects of α - and β -adrenergic stimulation on hepatosplanchnic perfusion and oxygen extraction in endotoxic shock","year":2001,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital","funders":"National Institutes of Health","keywords":"Medicine; Phenylephrine; Cardiac index; Anesthesia; Cardiac output; Artery; Femoral artery; Superior mesenteric artery; Pulmonary artery catheter; Perfusion; Blood flow; Shock (circulatory); Hemodynamics; Blood pressure; Internal medicine","score_opus":0.009874438487409869,"score_gpt":0.2854399687119445,"score_spread":0.2755655302245346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002252836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937373,0.00035088992,0.00011900155,0.000014224152,0.000006599162,0.000012731383,0.000017357816,0.0000034942923,0.00010193896],"genre_scores_gemma":[0.9987527,0.00057308556,0.0003515091,0.00006051631,0.000030135003,0.00004507087,0.000060256585,0.0000028120658,0.00012389083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997236,0.000119825934,0.000029014254,0.000029905077,0.000045412227,0.00005231733],"domain_scores_gemma":[0.99904805,0.00023029906,0.00041715975,0.000058172885,0.00004746253,0.00019876493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005308765,0.00035192425,0.00034583051,0.00013494978,0.00009044247,0.00019689156,0.000119306635,0.00015745593,0.00061818934],"category_scores_gemma":[0.00078657427,0.00011436794,0.00013268125,0.00008843961,0.0004287742,0.00017668954,0.00013253659,0.0004259211,0.0000711505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.14609742,0.0027500582,0.025299389,0.00036366514,0.00026310133,0.0003015997,0.00010828397,0.00054416,0.7851031,0.00007392309,0.00010612235,0.038989197],"study_design_scores_gemma":[0.006802959,0.3057175,0.37143928,0.00012572602,0.0005643044,0.0010031796,0.0003863622,0.0020148207,0.31050813,0.00015230458,0.0012474715,0.000037874746],"about_ca_topic_score_codex":0.00012269318,"about_ca_topic_score_gemma":0.0001668668,"teacher_disagreement_score":0.00061818934,"about_ca_system_score_codex":0.00014558467,"about_ca_system_score_gemma":0.0001748,"threshold_uncertainty_score":0.0028076172},"labels":[],"label_agreement":null},{"id":"W2002282447","doi":"10.1097/wnr.0b013e3283036e88","title":"Lipopolysaccharide and hypoxia/ischemia induced IL-2 expression by microglia in neonatal brain","year":2008,"lang":"en","type":"article","venue":"Neuroreport","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Microglia; Lipopolysaccharide; Hypoxia (environmental); Ischemia; Cytokine; In vivo; Biology; Immunology; Inflammation; Medicine; Internal medicine; Chemistry","score_opus":0.012388014287859192,"score_gpt":0.22593888392868958,"score_spread":0.2135508696408304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002282447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938805,0.0026814584,0.002209417,0.00007636219,0.00003691831,0.000027747217,0.00026305977,0.000029220611,0.0007952661],"genre_scores_gemma":[0.9917725,0.002108621,0.0037595842,0.00010413587,0.0000356199,0.00016870438,0.00055724394,0.000015838872,0.0014777927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985325,0.000026789869,0.000016017937,0.000024800336,0.000030089306,0.00004914585],"domain_scores_gemma":[0.9998729,0.000023197872,0.000039641393,0.000013172385,0.000016365555,0.000034674773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023915064,0.0005060418,0.0002255877,0.0002882616,0.00011378781,0.00022493114,0.00012257777,0.00025234933,0.00076232],"category_scores_gemma":[0.00017453269,0.00015717288,0.0002495157,0.00014581598,0.00026540738,0.0002911432,0.00020250329,0.00053957297,0.00020050017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020125946,0.000020891508,0.00029754944,0.000042674354,0.0000033670206,0.00016714794,0.000034888668,0.000027330867,0.9985802,0.00005719496,0.000010372073,0.0005571284],"study_design_scores_gemma":[0.00003024161,0.0006493672,0.012444324,0.000020647996,0.000027967395,0.00062151573,0.000110313806,0.00037429848,0.9848695,0.00016014326,0.0006824356,0.000009189428],"about_ca_topic_score_codex":0.0004011549,"about_ca_topic_score_gemma":0.00057993137,"teacher_disagreement_score":0.00076232,"about_ca_system_score_codex":0.000301528,"about_ca_system_score_gemma":0.00023064479,"threshold_uncertainty_score":0.0025501847},"labels":[],"label_agreement":null},{"id":"W2002489327","doi":"10.1186/1742-4690-6-42","title":"TLR2 and TLR4 triggering exerts contrasting effects with regard to HIV-1 infection of human dendritic cells and subsequent virus transfer to CD4+T cells","year":2009,"lang":"en","type":"article","venue":"Retrovirology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"Canadian Institutes of Health Research; Faculté de Médecine, Université Laval; Université Laval","keywords":"TLR2; TLR4; Immunology; Virus; Innate immune system; Toll-like receptor; Virology; TLR7; Viral entry; Transmission (telecommunications); Biology; Immune system; Interferon; Viral replication","score_opus":0.005498895127066794,"score_gpt":0.2125396711896747,"score_spread":0.2070407760626079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2002489327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99395317,0.0022250097,0.0008772395,0.000058874157,0.0000488763,0.000039812086,0.00014182563,0.000022607965,0.0026325332],"genre_scores_gemma":[0.9951013,0.001090522,0.0013989067,0.0000907128,0.00006221996,0.00008838491,0.00032662446,0.000012347173,0.001828958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999607,0.00011565668,0.000037654085,0.00004248268,0.00005220159,0.00014499723],"domain_scores_gemma":[0.9997491,0.000108970155,0.000030597523,0.000034040313,0.000025165404,0.000052055686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035835945,0.00042180988,0.00030340411,0.00023978263,0.00017052024,0.0005454219,0.00022444568,0.0005526801,0.003569544],"category_scores_gemma":[0.00040534997,0.0001827506,0.0003669782,0.0001650804,0.00022167938,0.00032796772,0.00038134298,0.0005653102,0.00075931265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011663731,0.000101553356,0.00045070346,0.0001281213,0.000008576736,0.00013843668,0.00002885432,0.000104404055,0.9947155,0.00019342992,0.000040089988,0.0029239962],"study_design_scores_gemma":[0.00006489502,0.0012645555,0.0044844253,0.000014313877,0.000027183882,0.00065911654,0.000057960373,0.000506828,0.9911641,0.00012818542,0.0016210787,0.0000074320346],"about_ca_topic_score_codex":0.000105349674,"about_ca_topic_score_gemma":0.0001044554,"teacher_disagreement_score":0.003569544,"about_ca_system_score_codex":0.00022260453,"about_ca_system_score_gemma":0.00016074617,"threshold_uncertainty_score":0.011941314},"labels":[],"label_agreement":null},{"id":"W2003261018","doi":"10.1002/iub.309","title":"Tumor necrosis factor, lymphotoxin and cancer","year":2010,"lang":"en","type":"review","venue":"IUBMB Life","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada)","funders":"Russian Academy of Sciences; Russian Foundation for Basic Research; Deutsche Forschungsgemeinschaft","keywords":"Lymphotoxin; Tumor necrosis factor alpha; Lymphotoxin beta receptor; Biology; Immune system; Immunology; Receptor; Lymphotoxin alpha; Innate immune system; Cancer; Signal transduction; Cell biology; Cancer research; Effector; Function (biology); Genetics","score_opus":0.03162346274301932,"score_gpt":0.30994868797430936,"score_spread":0.27832522523129005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003261018","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007290795,0.99823254,0.00005787174,0.00017240047,0.0003739723,0.0000018295332,0.000004967215,0.000003983333,0.0010795988],"genre_scores_gemma":[0.0010232554,0.99564594,0.00013831031,0.00021108516,0.0005329092,0.000005199397,0.000023923565,0.0000015580883,0.0024176894],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986374,0.00002570302,0.000016650398,0.000026267271,0.00005269845,0.000014897077],"domain_scores_gemma":[0.99983144,0.000056240402,0.00002695252,0.000009107088,0.000045097782,0.000031152133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003298809,0.0009239524,0.0009861346,0.0015584389,0.0003334755,0.00102904,0.0006688305,0.0012228243,0.0037338592],"category_scores_gemma":[0.00042171395,0.00019376092,0.00020135098,0.0025423646,0.00063116674,0.0014100885,0.00057658483,0.0014358268,0.0043427222],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087595705,0.00008086651,0.00024584378,0.005427892,0.00003130063,0.00032665613,0.00006035841,0.00025946673,0.0028056812,0.004755428,0.047444496,0.9384744],"study_design_scores_gemma":[0.000008224816,0.00004719186,0.0005088897,0.00074023736,0.000015687376,0.001207849,0.00003685769,0.000036055462,0.00037574882,0.0016175304,0.9954,0.0000056705326],"about_ca_topic_score_codex":0.00086682756,"about_ca_topic_score_gemma":0.0013524707,"teacher_disagreement_score":0.0037338592,"about_ca_system_score_codex":0.00079770875,"about_ca_system_score_gemma":0.00080722355,"threshold_uncertainty_score":0.012491047},"labels":[],"label_agreement":null},{"id":"W2003298222","doi":"10.1111/micc.12081","title":"Alpha‐1 Acid Glycoprotein Reduces Hepatic Leukocyte Recruitment in Murine Models of Either Early Endotoxemia or Early Sepsis","year":2013,"lang":"en","type":"article","venue":"Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Blood Services","funders":"Canadian Blood Services","keywords":"Sepsis; Intravital microscopy; Microcirculation; Lipopolysaccharide; Pharmacology; Inflammation; Medicine; Saline; Perfusion; Immunology; Perforation; Internal medicine","score_opus":0.03795380358564703,"score_gpt":0.25863849766672276,"score_spread":0.22068469408107572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003298222","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974037,0.0009359861,0.00085081614,0.000101521386,0.000027823518,0.00003152015,0.000095447955,0.00006453474,0.0004885749],"genre_scores_gemma":[0.9955,0.0009942397,0.0013865294,0.000069814414,0.000028343888,0.00006349374,0.00020389332,0.000014353823,0.0017393098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998393,0.000042024098,0.000010695934,0.000017854367,0.00003772862,0.00005233806],"domain_scores_gemma":[0.9998305,0.000017029557,0.00005942057,0.000016018856,0.000014380519,0.00006254832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017717152,0.00057918485,0.0004412458,0.00024351547,0.00011691767,0.00021699193,0.00019940888,0.00037429787,0.00094947894],"category_scores_gemma":[0.00017852987,0.00015387958,0.00017229271,0.00015579996,0.00029308963,0.000243135,0.00013710523,0.0008415005,0.00019607568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015462806,0.0003336811,0.00018500148,0.000057770638,0.000008350604,0.0000573855,0.000015035202,0.00008505618,0.9952179,0.00004257084,0.000056062796,0.002394957],"study_design_scores_gemma":[0.00015568352,0.010798444,0.005611102,0.000013444733,0.000031106072,0.00020234787,0.000035379882,0.0007490264,0.9813596,0.00004468944,0.0009930439,0.000006135497],"about_ca_topic_score_codex":0.00019134789,"about_ca_topic_score_gemma":0.00044220118,"teacher_disagreement_score":0.00094947894,"about_ca_system_score_codex":0.00015176782,"about_ca_system_score_gemma":0.00022927378,"threshold_uncertainty_score":0.003176272},"labels":[],"label_agreement":null},{"id":"W2003387001","doi":"10.1016/j.vetimm.2011.05.032","title":"TLR9 agonists: Immune mechanisms and therapeutic potential in domestic animals","year":2011,"lang":"en","type":"review","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Merial","keywords":"TLR9; Immune system; Biology; Innate immune system; Acquired immune system; Toll-Like Receptor 9; Immunology; Chemokine; CpG Oligodeoxynucleotide; Immunity; CpG site; Pattern recognition receptor; CCL18; Gene; Gene expression; DNA methylation; Genetics","score_opus":0.030007448230156494,"score_gpt":0.28892204486020157,"score_spread":0.25891459663004507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003387001","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023059505,0.99852103,0.00018452793,0.00021655728,0.00016432379,0.0000036539143,0.00001775325,0.0000066368343,0.00065490213],"genre_scores_gemma":[0.0015309805,0.9966273,0.00034879812,0.00025180122,0.00025498692,0.00000827001,0.00004118315,0.0000015863905,0.0009350038],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987555,0.000020828253,0.00001966743,0.00002670654,0.000040553292,0.00001671817],"domain_scores_gemma":[0.99970645,0.00015522786,0.000050560513,0.000008176435,0.00005461027,0.000024988009],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005956875,0.00088640186,0.0013568844,0.0009134693,0.00015412585,0.00073142006,0.0006934623,0.0011166098,0.0028538706],"category_scores_gemma":[0.00048494962,0.0002458282,0.00033917697,0.0007757498,0.00048411224,0.00086097495,0.0004232728,0.0018905714,0.0017166139],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025534842,0.00010102005,0.0001622626,0.0072837416,0.00005045194,0.00019233616,0.000022741122,0.0002791845,0.005771535,0.0013746013,0.013599089,0.97090775],"study_design_scores_gemma":[0.00007867601,0.000441122,0.0014691291,0.0026422658,0.00018416089,0.0023924096,0.00007243282,0.00017542246,0.0030397344,0.0016702723,0.98780614,0.000028285194],"about_ca_topic_score_codex":0.00042830355,"about_ca_topic_score_gemma":0.0011109604,"teacher_disagreement_score":0.0028538706,"about_ca_system_score_codex":0.0003293479,"about_ca_system_score_gemma":0.00057778496,"threshold_uncertainty_score":0.009547174},"labels":[],"label_agreement":null},{"id":"W2003471223","doi":"10.1016/j.pharmthera.2011.07.002","title":"Sensing sterile injury: Opportunities for pharmacological control","year":2011,"lang":"en","type":"review","venue":"Pharmacology & Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"","keywords":"Pathogenesis; Rheumatoid arthritis; Inflammation; Medicine; Fibrosis; Immunology; Necrosis; Inflammatory response; Liver injury; Pathology; Pharmacology","score_opus":0.23553267566433983,"score_gpt":0.396913975964576,"score_spread":0.16138130030023617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003471223","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010285814,0.99668735,0.0004947518,0.0005488638,0.00055842317,0.0000072519765,0.00002444111,0.00001986796,0.0015561592],"genre_scores_gemma":[0.0006677609,0.9969266,0.00049963617,0.00046533803,0.00046732108,0.000012674013,0.00004318431,0.0000030187136,0.0009143841],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997638,0.00003689254,0.000028624427,0.00004859669,0.00009032568,0.000031769923],"domain_scores_gemma":[0.9995036,0.00022740316,0.000053287935,0.000024537418,0.0001248848,0.000066265566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010145179,0.0016290598,0.0024492785,0.0019032973,0.00041766503,0.0018072788,0.0014754877,0.0018105928,0.0038042737],"category_scores_gemma":[0.0009115404,0.00044953093,0.00056354963,0.0020134537,0.0014089952,0.002656491,0.0010766505,0.0045923484,0.003734611],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016839168,0.00017228948,0.00011709176,0.0076308725,0.00007492194,0.00019274649,0.000043096323,0.00053181266,0.0051816176,0.008356898,0.054005437,0.92352474],"study_design_scores_gemma":[0.000050308496,0.00014047886,0.0003749077,0.0011224161,0.00006226838,0.00062429067,0.000045989855,0.00016120351,0.0007107926,0.00404988,0.9926292,0.000028318886],"about_ca_topic_score_codex":0.00070829614,"about_ca_topic_score_gemma":0.0019124919,"teacher_disagreement_score":0.0038042737,"about_ca_system_score_codex":0.00091637525,"about_ca_system_score_gemma":0.0011330848,"threshold_uncertainty_score":0.012726545},"labels":[],"label_agreement":null},{"id":"W2003492168","doi":"10.1002/iub.361","title":"The multifaceted effects of granulocyte colony‐stimulating factor in immunomodulation and potential roles in intestinal immune homeostasis","year":2010,"lang":"en","type":"review","venue":"IUBMB Life","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":121,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada); Western University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Immune system; Granulocyte macrophage colony-stimulating factor; Granulocyte; Haematopoiesis; Homeostasis; Immunology; Biology; Granulocyte colony-stimulating factor; Colony-stimulating factor; Myeloid; Cytokine; Cell biology; Stem cell","score_opus":0.012078420382760075,"score_gpt":0.27359703159017745,"score_spread":0.2615186112074174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2003492168","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026761083,0.9983937,0.0001746866,0.0001674522,0.00012972619,0.000002709428,0.000008827895,0.0000053544295,0.0008498181],"genre_scores_gemma":[0.0012278823,0.9975164,0.0003390685,0.0000974577,0.00013401276,0.0000052145724,0.000019326966,0.0000013042996,0.00065923657],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998869,0.000019638077,0.000019309995,0.00001870101,0.000041912866,0.000013464258],"domain_scores_gemma":[0.99988115,0.000043790005,0.000019885681,0.0000047261556,0.000030457211,0.000019907577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003526517,0.0007605169,0.0010777146,0.0014903375,0.00024184053,0.0008594119,0.000641561,0.0008816221,0.0018319321],"category_scores_gemma":[0.00025696968,0.00019933264,0.00027505218,0.0019613926,0.000494898,0.0011155242,0.0005835092,0.0011164688,0.0016634119],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009168276,0.00006530077,0.00023235846,0.00981222,0.00005381647,0.0006033899,0.00011206244,0.00036287875,0.01254079,0.005458678,0.010740766,0.9599261],"study_design_scores_gemma":[0.000018340323,0.000119683034,0.0017080469,0.0022092736,0.00007933215,0.0039080973,0.0001580006,0.00014129948,0.003292799,0.003681626,0.98466164,0.00002192296],"about_ca_topic_score_codex":0.0005451124,"about_ca_topic_score_gemma":0.0007477218,"teacher_disagreement_score":0.0018319321,"about_ca_system_score_codex":0.0005897044,"about_ca_system_score_gemma":0.00080038665,"threshold_uncertainty_score":0.0061283708},"labels":[],"label_agreement":null},{"id":"W2004080374","doi":"10.1002/jbm.a.32096","title":"Effect of alginate on innate immune activation of macrophages","year":2008,"lang":"en","type":"article","venue":"Journal of Biomedical Materials Research Part A","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Innate immune system; Proinflammatory cytokine; Lipopolysaccharide; Macrophage; Inflammation; Immune system; Stimulation; Cell biology; Tumor necrosis factor alpha; Immunology; Materials science; Biology; Biochemistry; Neuroscience; In vitro","score_opus":0.028875475023724645,"score_gpt":0.3471030407203116,"score_spread":0.31822756569658694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004080374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99450314,0.0032637042,0.00046547427,0.00012699366,0.000067622284,0.000019278325,0.000102447804,0.000022906223,0.0014285813],"genre_scores_gemma":[0.99617,0.0013162872,0.0007019994,0.0001181726,0.000026281983,0.00002082632,0.00011310949,0.0000056480094,0.0015278071],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980146,0.00007114333,0.000017944503,0.000016077067,0.000031696185,0.00006163699],"domain_scores_gemma":[0.9998498,0.000049166352,0.000024489798,0.000018684004,0.000023678447,0.00003423368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002853525,0.00031766322,0.0002193724,0.00014407455,0.00012955595,0.00028332637,0.000093731505,0.00019307154,0.0008179733],"category_scores_gemma":[0.0002588676,0.00009675878,0.0002911246,0.00008355665,0.00019319843,0.00015479332,0.00019043239,0.0003132964,0.00019621987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012956761,0.000112122056,0.0003510052,0.00011180153,0.000014705405,0.00007332178,0.000033284043,0.00005605133,0.99393034,0.00006937983,0.000099799916,0.0038525483],"study_design_scores_gemma":[0.00013473394,0.0030616575,0.0037772297,0.000027043663,0.00004375969,0.00019589542,0.000039666516,0.00054545706,0.989758,0.000076186196,0.0023308462,0.000009420025],"about_ca_topic_score_codex":0.00054088683,"about_ca_topic_score_gemma":0.0009615798,"teacher_disagreement_score":0.0008179733,"about_ca_system_score_codex":0.00015749226,"about_ca_system_score_gemma":0.0002447375,"threshold_uncertainty_score":0.0027364492},"labels":[],"label_agreement":null},{"id":"W2004379146","doi":"10.2345/0899-8205(2004)38[73:betaro]2.0.co;2","title":"Bacterial Endotoxin Testing: A Report on the Methods, Background, Data, and Regulatory History of Extraction Recovery Efficiency","year":2004,"lang":"en","type":"review","venue":"Biomedical Instrumentation & Technology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kimberly-Clark (Canada)","funders":"","keywords":"Limulus amebocyte lysate; Task group; Test (biology); Medical instrumentation; Reliability engineering; Extraction (chemistry); Computer science; Medicine; Engineering; Chromatography; Engineering management; Chemistry; Biology; Immunology","score_opus":0.08797482823156608,"score_gpt":0.3608933572987987,"score_spread":0.2729185290672326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004379146","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073883793,0.98337805,0.0035802752,0.0011731939,0.0016073424,0.000121458535,0.000477802,0.000096080585,0.008827014],"genre_scores_gemma":[0.0026416194,0.977957,0.006450808,0.0008878159,0.00072152563,0.00019621097,0.0008736074,0.000040560917,0.01023095],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969897,0.0004804376,0.0004618746,0.0003466239,0.0015981448,0.00012319081],"domain_scores_gemma":[0.9960716,0.0011995406,0.0005914591,0.00015613686,0.0018780746,0.00010323353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043352195,0.0016765608,0.0020143527,0.0053873034,0.0004707461,0.0017429598,0.0013855366,0.0016318122,0.0041561746],"category_scores_gemma":[0.0045573553,0.00062751723,0.00073442346,0.0052221394,0.00092116627,0.002413301,0.00088813365,0.00170881,0.008095258],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008316318,0.00016496441,0.0006388482,0.009113911,0.000032666612,0.00024334443,0.00008383342,0.0002585896,0.010907221,0.0031259817,0.04423296,0.9311145],"study_design_scores_gemma":[0.0000078421735,0.00014589183,0.0010818464,0.0017122406,0.000025680929,0.0006484325,0.00003831435,0.00005272893,0.008153572,0.0006219759,0.98748416,0.000027398486],"about_ca_topic_score_codex":0.0021562378,"about_ca_topic_score_gemma":0.0019091626,"teacher_disagreement_score":0.0053873034,"about_ca_system_score_codex":0.0013158193,"about_ca_system_score_gemma":0.0028631275,"threshold_uncertainty_score":0.022927105},"labels":[],"label_agreement":null},{"id":"W2004597643","doi":"10.1159/000213093","title":"Age-Dependent Changes in Antigenic Promotion, A Th-2 Type of Activity","year":2009,"lang":"en","type":"article","venue":"Gerontology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Medical Research Council","keywords":"Hapten; Spleen; Dinitrophenyl; Sensitization; Antigen; Macromolecule; Chemistry; Immunology; Antibody; Molecular biology; Biology; Biochemistry","score_opus":0.0440014107614933,"score_gpt":0.3004726842099287,"score_spread":0.2564712734484354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004597643","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885565,0.0027071582,0.0021384973,0.000082050545,0.0000892972,0.00009570494,0.0011620369,0.00011385757,0.0050547924],"genre_scores_gemma":[0.98854023,0.0011729556,0.0013007169,0.00010835825,0.000057969246,0.00010413915,0.0010505462,0.000033752593,0.007631353],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999818,0.00002992382,0.000018330378,0.000052030187,0.000040450373,0.00004133163],"domain_scores_gemma":[0.99942446,0.000102175494,0.00013653151,0.00009158663,0.00011906457,0.00012629341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032298075,0.0004318492,0.0002461122,0.0003686327,0.000115511415,0.00024794153,0.00014474432,0.00035809868,0.0033861916],"category_scores_gemma":[0.00037660572,0.00020405794,0.00028373886,0.00015061996,0.00016976116,0.00028715562,0.00019264713,0.00072869245,0.00084783277],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025383124,0.00006523421,0.0024119222,0.000039573493,0.0000051241977,0.00005539842,0.000028428412,0.000022526074,0.99538076,0.000057755577,0.00004391228,0.0016355702],"study_design_scores_gemma":[0.000027699156,0.0033566284,0.12840405,0.00002197315,0.000054959102,0.00094223535,0.00007258152,0.00036038234,0.8612204,0.00024048044,0.005282219,0.00001642624],"about_ca_topic_score_codex":0.00017776717,"about_ca_topic_score_gemma":0.00022609739,"teacher_disagreement_score":0.0033861916,"about_ca_system_score_codex":0.0001277576,"about_ca_system_score_gemma":0.00012726952,"threshold_uncertainty_score":0.011327982},"labels":[],"label_agreement":null},{"id":"W2004834904","doi":"10.1016/j.cellimm.2011.06.020","title":"LPS response and endotoxin tolerance in Flt-3L-induced bone marrow-derived dendritic cells","year":2011,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Fondation des pompiers du Québec pour les grands brûlés","keywords":"TLR4; Biology; Bone marrow; Stimulation; Cell biology; p38 mitogen-activated protein kinases; MAPK/ERK pathway; Dendritic cell; Tumor necrosis factor alpha; Cancer research; Immunology; Signal transduction; Immune system; Endocrinology","score_opus":0.015140095473807279,"score_gpt":0.20379059753375872,"score_spread":0.18865050205995143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004834904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99712807,0.0005707033,0.0010095603,0.00015234109,0.000054247343,0.000033037188,0.00046999377,0.000042342337,0.0005397305],"genre_scores_gemma":[0.9969175,0.00025863343,0.0006833978,0.00013133518,0.000034853303,0.00005944548,0.00083774264,0.000019991696,0.0010570671],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995658,0.000089272784,0.00005383435,0.00005631953,0.000090213274,0.00014452919],"domain_scores_gemma":[0.9997124,0.000050242135,0.000071546165,0.000046502908,0.00003467605,0.00008465462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003746736,0.0004962788,0.0004689043,0.00035584398,0.000279614,0.00054914353,0.0002972171,0.00056156033,0.0016623947],"category_scores_gemma":[0.00028842408,0.00025524895,0.00043019382,0.00021435671,0.00042319635,0.00038273007,0.00039881465,0.0022250684,0.0006957756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010497246,0.00012071258,0.00028504772,0.000024837884,0.000004660722,0.00006461593,0.000025736192,0.00006435451,0.9973974,0.00013991584,0.00004648597,0.00077640155],"study_design_scores_gemma":[0.0003615685,0.0018414038,0.012522094,0.000016812035,0.00004889449,0.00044050728,0.00012527786,0.0016681737,0.98074186,0.00026387078,0.0019523572,0.000017208407],"about_ca_topic_score_codex":0.00046885447,"about_ca_topic_score_gemma":0.0006044065,"teacher_disagreement_score":0.0016623947,"about_ca_system_score_codex":0.00039816942,"about_ca_system_score_gemma":0.00042265814,"threshold_uncertainty_score":0.005561292},"labels":[],"label_agreement":null},{"id":"W2005030250","doi":"10.1016/j.dci.2012.11.005","title":"Characterization of three Nod-like receptors and their role in antimicrobial responses of goldfish (Carassius auratus L.) macrophages to Aeromonas salmonicida and Mycobacterium marinum","year":2012,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; China Scholarship Council","keywords":"NOD1; Biology; Aeromonas salmonicida; Nod; Receptor; Microbiology; Mycobacterium marinum; Innate immune system; NOD2; Molecular biology; Gene; Mycobacterium; Biochemistry; Genetics; Bacteria","score_opus":0.01487207856791983,"score_gpt":0.2342500823483887,"score_spread":0.21937800378046887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005030250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859136,0.0005215057,0.0003907037,0.000048926468,0.000004397616,0.0000069689927,0.00008999915,0.0000030319584,0.00034302505],"genre_scores_gemma":[0.9977703,0.00025606403,0.0005255315,0.00005526229,0.0000039005304,0.000016367829,0.00036260218,0.000002791332,0.00100708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998834,0.000014550442,0.000014310315,0.000027059572,0.000017903783,0.00004281089],"domain_scores_gemma":[0.9998511,0.000027035741,0.000027841246,0.000020326672,0.00003335846,0.000040295356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022966454,0.00022765684,0.0002303916,0.00025347568,0.00019621819,0.0003785695,0.00018965013,0.00032236273,0.00076877733],"category_scores_gemma":[0.00021167635,0.00020569944,0.0003780797,0.00010517262,0.00030188754,0.0002882792,0.0003616564,0.00034479337,0.0003472524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002177633,0.000020595611,0.002956366,0.0000367182,0.000008371477,0.00013438199,0.000070889735,0.000041426272,0.99513996,0.000099002245,0.000017769398,0.0012566866],"study_design_scores_gemma":[0.00018985698,0.0016581478,0.3678362,0.00007566905,0.00016312157,0.003307898,0.0020274196,0.0026706741,0.61301535,0.00056691235,0.008434416,0.000054340027],"about_ca_topic_score_codex":0.000870411,"about_ca_topic_score_gemma":0.0012152947,"teacher_disagreement_score":0.000870411,"about_ca_system_score_codex":0.00025379343,"about_ca_system_score_gemma":0.0002311293,"threshold_uncertainty_score":0.0025718212},"labels":[],"label_agreement":null},{"id":"W2005410905","doi":"10.1186/1753-6561-5-s1-p87","title":"Toll-Like Receptors are critical in controlling colonic inflammation and cancer","year":2011,"lang":"en","type":"article","venue":"BMC Proceedings","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Carcinogenesis; Proinflammatory cytokine; PI3K/AKT/mTOR pathway; Cancer research; Suppressor; Inflammation; Cancer; Signal transduction; Biology; Immunology; Medicine; Cell biology; Internal medicine","score_opus":0.0257395336626279,"score_gpt":0.2555164740052071,"score_spread":0.2297769403425792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005410905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8743597,0.103053436,0.007849932,0.0014033407,0.00034950825,0.00013259747,0.001121227,0.00059169915,0.011138579],"genre_scores_gemma":[0.96865326,0.018852858,0.0041551837,0.00026542094,0.00011875047,0.000058016376,0.0005361129,0.000024962575,0.0073354715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982554,0.000032773805,0.00001771185,0.00003119116,0.0000462019,0.000046559337],"domain_scores_gemma":[0.9998821,0.00000596662,0.000046314894,0.0000095513315,0.000017402821,0.00003857242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014237849,0.00045029842,0.00022517597,0.00030544822,0.00022034445,0.00037508315,0.00016422068,0.0003785955,0.001500292],"category_scores_gemma":[0.00012072975,0.00016256394,0.00022524683,0.00014716391,0.00021984392,0.00021896114,0.00028319348,0.0005625619,0.00057085056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043864993,0.000036109846,0.0013114633,0.00026175176,0.000011631532,0.00028841203,0.000025315268,0.000102520775,0.9839303,0.0004905476,0.0003186672,0.0127845565],"study_design_scores_gemma":[0.00014338638,0.002049362,0.102999024,0.00015755784,0.00010975566,0.004281086,0.00034091924,0.0017373554,0.82390785,0.0013221981,0.06288915,0.00006238523],"about_ca_topic_score_codex":0.00032664064,"about_ca_topic_score_gemma":0.0004467687,"teacher_disagreement_score":0.001500292,"about_ca_system_score_codex":0.00021629623,"about_ca_system_score_gemma":0.00028187438,"threshold_uncertainty_score":0.0050189495},"labels":[],"label_agreement":null},{"id":"W2005507128","doi":"10.1126/science.1172747","title":"Innate and Adaptive Immunity Cooperate Flexibly to Maintain Host-Microbiota Mutualism","year":2009,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":502,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Population Health Research Institute","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"Immune system; Biology; Innate immune system; Acquired immune system; Compartmentalization (fire protection); Immunity; Pattern recognition receptor; Bacteria; Mutualism (biology); Microbiology; Immunology; Receptor; Cell biology; Ecology; Genetics; Enzyme","score_opus":0.011132984969813693,"score_gpt":0.2563289487879263,"score_spread":0.2451959638181126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005507128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93176615,0.01130692,0.03216551,0.0047906656,0.00037503446,0.00008183846,0.000090599184,0.0006113448,0.018811876],"genre_scores_gemma":[0.9892145,0.0015102911,0.00644919,0.00059485086,0.00011104029,0.000033538246,0.00004206338,0.000035450794,0.0020090344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986237,0.0003690887,0.00009489737,0.00016532555,0.00033269046,0.00041426034],"domain_scores_gemma":[0.99874806,0.0002220998,0.0002825545,0.00023883751,0.00014936338,0.0003590036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020166775,0.0006071499,0.00078027823,0.00070489687,0.0003761268,0.0020070004,0.0007807788,0.001002097,0.0022029914],"category_scores_gemma":[0.0013259768,0.00048356134,0.00049111736,0.00026281076,0.0015074564,0.0023849006,0.0028772466,0.001814165,0.0008576841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089356344,0.00021550903,0.011823841,0.00045942035,0.00024558586,0.0015251763,0.0008393047,0.0023814342,0.89380354,0.021804139,0.0017722871,0.06423625],"study_design_scores_gemma":[0.00086698885,0.004511438,0.16840632,0.000704609,0.00068457564,0.008471882,0.0031758472,0.029254837,0.57666165,0.12589648,0.08101762,0.00034781717],"about_ca_topic_score_codex":0.00014839238,"about_ca_topic_score_gemma":0.0002492071,"teacher_disagreement_score":0.0022029914,"about_ca_system_score_codex":0.0006361936,"about_ca_system_score_gemma":0.000649195,"threshold_uncertainty_score":0.010665357},"labels":[],"label_agreement":null},{"id":"W2005865250","doi":"10.1378/chest.128.3.1690","title":"Interleukin-10 Haplotype Associated With Increased Mortality in Critically Ill Patients With Sepsis From Pneumonia But Not in Patients With Extrapulmonary Sepsis","year":2005,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Sepsis; Medicine; Haplotype; Organ dysfunction; Pneumonia; Single-nucleotide polymorphism; Internal medicine; Intensive care; Gastroenterology; Genotype; Intensive care medicine; Gene; Genetics; Biology","score_opus":0.008783212309799294,"score_gpt":0.21712638607027446,"score_spread":0.20834317376047518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005865250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999479,0.00007550061,0.00005999478,0.000053111493,0.00001656554,0.0000020118928,0.000056953744,0.0000017189424,0.00025511027],"genre_scores_gemma":[0.9997069,0.000021327776,0.000035735568,0.000037777194,0.000030189982,0.0000031731158,0.00006966809,0.0000017463667,0.00009360839],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996686,0.000111075584,0.000039881263,0.000053172556,0.000028277675,0.0000989608],"domain_scores_gemma":[0.99773896,0.00064336613,0.0007652712,0.000111658774,0.00013402554,0.0006066575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026244717,0.00045073518,0.00057724875,0.0004918761,0.0005454326,0.0005811179,0.0002785571,0.00073655526,0.0033885366],"category_scores_gemma":[0.001959729,0.00024763108,0.00038957468,0.000438608,0.00037239568,0.00036768927,0.00034120964,0.0010260288,0.0003415429],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012944019,0.000075804885,0.9934383,0.00001179283,0.00008797077,0.000756788,0.00008089175,0.000053764892,0.0032378107,0.00003369109,0.00012134885,0.0008073556],"study_design_scores_gemma":[0.0000543132,0.00040727638,0.99619293,0.000010757014,0.00007731995,0.0022177605,0.00022771046,0.00035818436,0.0002469573,0.00007886653,0.0001181948,0.0000097935135],"about_ca_topic_score_codex":0.0007656304,"about_ca_topic_score_gemma":0.00090551295,"teacher_disagreement_score":0.0033885366,"about_ca_system_score_codex":0.00014551902,"about_ca_system_score_gemma":0.00019568122,"threshold_uncertainty_score":0.011335731},"labels":[],"label_agreement":null},{"id":"W2005893206","doi":"10.1155/2009/860565","title":"Chemokine Receptor and Ligand Upregulation in the Diaphragm during Endotoxemia and Pseudomonas Lung Infection","year":2009,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre; McGill University; Christie (Canada)","funders":"","keywords":"Downregulation and upregulation; Chemokine receptor; Ligand (biochemistry); Lung; Diaphragm (acoustics); Receptor; Chemokine; Pseudomonas aeruginosa; Microbiology; Immunology; Medicine; Biology; Internal medicine; Bacteria; Gene; Biochemistry; Engineering; Genetics","score_opus":0.0031259338878204574,"score_gpt":0.20710355531452496,"score_spread":0.2039776214267045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005893206","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995874,0.0024659128,0.00097016804,0.000052997344,0.000014493712,0.000021299948,0.00007340494,0.00002628668,0.0005015169],"genre_scores_gemma":[0.996061,0.0011906988,0.0014501732,0.000057224494,0.000016501397,0.000051533712,0.00022219475,0.000005804762,0.00094482896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976724,0.000078555575,0.000020358837,0.000030518753,0.00005361318,0.00004964233],"domain_scores_gemma":[0.9998017,0.000021602396,0.000083748724,0.000016341526,0.000024612853,0.000051912964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023611735,0.00022619507,0.00026581634,0.00023550578,0.00012064723,0.00020731342,0.000093774324,0.0002881124,0.00077913137],"category_scores_gemma":[0.0003647837,0.00015442874,0.00015319092,0.000096253556,0.00027262155,0.00020955456,0.0002477624,0.0003031141,0.0002243907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038767856,0.000019588746,0.0009109374,0.00005695805,0.000004900363,0.00033384637,0.000021137725,0.000021335838,0.99691665,0.000036376507,0.000037208123,0.001253425],"study_design_scores_gemma":[0.00014267517,0.0041584745,0.26553196,0.000058933605,0.000077219294,0.009214442,0.0003401553,0.0020475963,0.7147581,0.00018890397,0.003452672,0.000028938823],"about_ca_topic_score_codex":0.00013689151,"about_ca_topic_score_gemma":0.00020631327,"teacher_disagreement_score":0.00077913137,"about_ca_system_score_codex":0.00016095323,"about_ca_system_score_gemma":0.00012366538,"threshold_uncertainty_score":0.0026064515},"labels":[],"label_agreement":null},{"id":"W2006054534","doi":"10.1016/j.clinbiochem.2014.04.009","title":"Interleukin-1β genotype and circulating levels in cancer patients: Metastatic status and pain perception","year":2014,"lang":"en","type":"article","venue":"Clinical Biochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences North","funders":"Programa Operacional Temático Factores de Competitividade; Liga Portuguesa Contra o Cancro; European Social Fund; Fundação para a Ciência e a Tecnologia; Ministério da Ciência, Tecnologia e Ensino Superior; Ministerstwo Edukacji i Nauki","keywords":"Medicine; Exact test; Internal medicine; Hyperalgesia; Neuropathic pain; Cancer; Genotype; Allodynia; Oncology; Proinflammatory cytokine; Gastroenterology; Cytokine; Inflammation; Anesthesia; Receptor; Nociception; Gene","score_opus":0.02780604333433278,"score_gpt":0.3230703239264384,"score_spread":0.29526428059210563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006054534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990728,0.00044261952,0.000032876866,0.00003133108,0.0000059301037,0.0000019913205,0.000102045,0.0000020821644,0.00030824036],"genre_scores_gemma":[0.999526,0.00013377813,0.00003458158,0.000025185162,0.000012666734,0.000004371561,0.00009835314,9.861236e-7,0.00016410217],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998832,0.000026835929,0.000015701342,0.000023351153,0.000019099158,0.000031826996],"domain_scores_gemma":[0.9992418,0.00020180886,0.00029178054,0.000024219498,0.00005268994,0.00018778606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015937458,0.00020677569,0.0003738562,0.00048344868,0.00030024027,0.0005825843,0.00012685468,0.00042751877,0.0019372219],"category_scores_gemma":[0.0012367901,0.0001490538,0.0002348983,0.000616343,0.0001794383,0.00029563054,0.00019428723,0.00044901532,0.00025596688],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005572514,0.000060970753,0.9965252,0.000011145802,0.000035551344,0.00012238475,0.00006450724,0.00003444253,0.0010634563,0.00000890686,0.000051266976,0.001464889],"study_design_scores_gemma":[0.000009403469,0.000251402,0.9986864,0.000004718703,0.00003312311,0.0004929026,0.00015631878,0.00012193384,0.00012466052,0.000025059207,0.00008948008,0.000004591359],"about_ca_topic_score_codex":0.0009419054,"about_ca_topic_score_gemma":0.0011021176,"teacher_disagreement_score":0.0019372219,"about_ca_system_score_codex":0.00015034417,"about_ca_system_score_gemma":0.00016184538,"threshold_uncertainty_score":0.006480634},"labels":[],"label_agreement":null},{"id":"W2006794610","doi":"10.1111/j.1365-3083.2005.001554.x","title":"Responses to Free Lipopolysaccharide and <i>Escherichia coli</i> by Normal Human Intestinal Macrophages, Following their Migration out of the Lamina Propria","year":2005,"lang":"en","type":"article","venue":"Scandinavian Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; University of Nottingham","keywords":"Lamina propria; CD14; Lipopolysaccharide; Biology; TLR4; Tumor necrosis factor alpha; NOD2; Intracellular; TLR2; Molecular biology; Escherichia coli; Microbiology; Inflammation; Innate immune system; Immunology; Immune system; Flow cytometry; Epithelium; Cell biology; Biochemistry","score_opus":0.008087086340806219,"score_gpt":0.23102271284901654,"score_spread":0.22293562650821033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2006794610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787605,0.0008800649,0.00061424955,0.000032606622,0.000016818467,0.000026034324,0.00009606248,0.000009600574,0.00044863834],"genre_scores_gemma":[0.9958835,0.00075614656,0.0012160537,0.0000902187,0.00003329422,0.00011783547,0.0005295786,0.000007629773,0.001365759],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977094,0.00007136915,0.000027860287,0.000034553985,0.00003841447,0.00005691309],"domain_scores_gemma":[0.999882,0.000024272069,0.000021355183,0.000016738553,0.000032544107,0.000023072738],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000268762,0.00033790484,0.00021634718,0.000117459196,0.00011054117,0.00024078056,0.000120838806,0.00031277593,0.0011896697],"category_scores_gemma":[0.00027726727,0.00013484173,0.00018110372,0.000092708266,0.00018082022,0.0001665392,0.00018830952,0.0002559913,0.0004825566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074611424,0.000044229102,0.0011115469,0.00005924799,0.000005297538,0.00011758376,0.000046244233,0.000023871418,0.9966215,0.000016879285,0.00003666571,0.0011708117],"study_design_scores_gemma":[0.00014969846,0.0052305693,0.052711207,0.000037782836,0.00006707884,0.0024124885,0.0004039287,0.0009006209,0.9340702,0.00011849241,0.0038774805,0.000020493939],"about_ca_topic_score_codex":0.00020568572,"about_ca_topic_score_gemma":0.00020032494,"teacher_disagreement_score":0.0011896697,"about_ca_system_score_codex":0.00010440541,"about_ca_system_score_gemma":0.00009846105,"threshold_uncertainty_score":0.0039798617},"labels":[],"label_agreement":null},{"id":"W2008313390","doi":"10.1074/jbc.m113.466334","title":"The Size of the Unbranched Aliphatic Chain Determines the Immunomodulatory Potency of Short and Long Chain n-Alkanols","year":2013,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"NFAT; Chemistry; Potency; Alcohol; Homologous series; Ethanol; Cytokine; Transcription factor; Stereochemistry; Biochemistry; Cell biology; In vitro; Biology; Gene; Immunology; Organic chemistry","score_opus":0.00880549144520297,"score_gpt":0.21276746749991152,"score_spread":0.20396197605470856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008313390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982358,0.00087241415,0.00023556653,0.000020468178,0.000006791628,0.0000055027294,0.00007153914,0.0000032921564,0.0005485481],"genre_scores_gemma":[0.99837565,0.000747527,0.00026303038,0.00002352568,0.000008031101,0.00000727133,0.00009831642,0.0000025611064,0.00047412998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993527,0.0000108865515,0.000005140923,0.000008617755,0.000017422728,0.000022744378],"domain_scores_gemma":[0.99985313,0.000033883945,0.000043589913,0.000009383881,0.00002558131,0.00003433257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000072831834,0.00015290358,0.00008883866,0.00012448755,0.000047667327,0.00013827438,0.000065682,0.00012906606,0.0010316161],"category_scores_gemma":[0.00013779647,0.00005788887,0.00012093852,0.00009375922,0.00013594271,0.00017524992,0.00010095399,0.00026664993,0.0001939772],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014895624,0.000014556639,0.00048352007,0.000022080401,0.0000022235029,0.000020105066,0.0000065760883,0.00005091185,0.99819285,0.00002014666,0.0000072827806,0.0010306883],"study_design_scores_gemma":[0.0000060456523,0.00068806816,0.015933748,0.000009197593,0.000013647013,0.00008947143,0.00004508682,0.0003031202,0.98201466,0.000056194673,0.00083611684,0.0000046193695],"about_ca_topic_score_codex":0.0001498487,"about_ca_topic_score_gemma":0.00022087197,"teacher_disagreement_score":0.0010316161,"about_ca_system_score_codex":0.00008838624,"about_ca_system_score_gemma":0.00007641073,"threshold_uncertainty_score":0.0034510493},"labels":[],"label_agreement":null},{"id":"W2008508773","doi":"10.1097/00000658-200204000-00014","title":"Alteration of Chemoattractant Receptor Expression Regulates Human Neutrophil Chemotaxis In Vivo","year":2002,"lang":"en","type":"article","venue":"Annals of Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Smith and Nephew","keywords":"Chemotaxis; Receptor; In vivo; Immunology; Interleukin 8; Medicine; Exudate; Cell biology; Inflammation; Biology; Internal medicine; Pathology","score_opus":0.13032349147812883,"score_gpt":0.29248855425220543,"score_spread":0.1621650627740766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008508773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99866843,0.0005562212,0.00050693343,0.000021104508,0.000003554725,0.000009950799,0.000046612684,0.000008891301,0.00017821226],"genre_scores_gemma":[0.99882287,0.00026710486,0.000475054,0.000024460027,0.000004095063,0.000019967367,0.00012039268,0.0000024430617,0.00026366493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997683,0.000077359604,0.000019467028,0.00003244837,0.000043328597,0.000059070593],"domain_scores_gemma":[0.99987984,0.00002916002,0.00004168969,0.000015046452,0.000012217733,0.000021926266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002174422,0.00025553993,0.00021498099,0.00015112074,0.000106781816,0.00024869345,0.00010185084,0.00022792548,0.0013239476],"category_scores_gemma":[0.0003553356,0.00010309465,0.00013570493,0.00008285857,0.00020557652,0.00013444386,0.000118601674,0.00024206821,0.00028496995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006108441,0.00004134585,0.0013358829,0.000028935934,0.0000051267234,0.0000891883,0.00001872411,0.000062625244,0.996183,0.000031356147,0.000023072336,0.0015698625],"study_design_scores_gemma":[0.00011419393,0.004278101,0.1312592,0.000016178128,0.00006174746,0.0022341495,0.00010746829,0.001878689,0.8585003,0.00008164194,0.0014542338,0.000014158912],"about_ca_topic_score_codex":0.0003005066,"about_ca_topic_score_gemma":0.0002564552,"teacher_disagreement_score":0.0013239476,"about_ca_system_score_codex":0.00023506297,"about_ca_system_score_gemma":0.00013730304,"threshold_uncertainty_score":0.0044290423},"labels":[],"label_agreement":null},{"id":"W2008680963","doi":"10.1038/labinvest.3700366","title":"Lipopolysaccharide signaling in endothelial cells","year":2005,"lang":"en","type":"review","venue":"Laboratory Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":613,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"TLR4; Cell biology; CD14; Toll-like receptor; Innate immune system; Signal transduction; Proinflammatory cytokine; Lipopolysaccharide; Receptor; Biology; Signal transducing adaptor protein; Inflammation; Pattern recognition receptor; Tumor necrosis factor alpha; Immunology; Immune system; Biochemistry","score_opus":0.028408714071492355,"score_gpt":0.281005791088546,"score_spread":0.25259707701705364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008680963","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012161173,0.9960367,0.00045126615,0.00064117066,0.0014067278,0.000008555625,0.000022951197,0.000016032483,0.0012949681],"genre_scores_gemma":[0.00071290054,0.9952297,0.0004820585,0.00056223525,0.0010988817,0.000012235421,0.000051842806,0.0000022660404,0.0018479077],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997664,0.000036304737,0.000038762537,0.00004239223,0.000088570065,0.000027592467],"domain_scores_gemma":[0.99955136,0.00013872379,0.000059311253,0.000023082626,0.00015759272,0.00006982438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011406905,0.0016654093,0.0016045911,0.001962375,0.0003596576,0.0016687368,0.0013082419,0.0020730332,0.0029129414],"category_scores_gemma":[0.00090882386,0.00046337966,0.00040694707,0.002021707,0.0010236391,0.0020921144,0.001003664,0.0031912145,0.0034023505],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017511728,0.000090798116,0.0001446225,0.0057879714,0.000043160315,0.0003673305,0.000035912293,0.00033957246,0.0054744147,0.0037250526,0.069105975,0.9147101],"study_design_scores_gemma":[0.000039154806,0.00007936175,0.0004002537,0.0014982942,0.00006494643,0.00093117123,0.00003803855,0.00009575667,0.0013693231,0.0017940692,0.99367154,0.00001807147],"about_ca_topic_score_codex":0.0008570836,"about_ca_topic_score_gemma":0.0018230608,"teacher_disagreement_score":0.0029129414,"about_ca_system_score_codex":0.0009931197,"about_ca_system_score_gemma":0.0015939014,"threshold_uncertainty_score":0.009744763},"labels":[],"label_agreement":null},{"id":"W2008793028","doi":"10.1007/s11095-008-9571-x","title":"Discovery and Development of Toll-Like Receptor 4 (TLR4) Antagonists: A New Paradigm for Treating Sepsis and Other Diseases","year":2008,"lang":"en","type":"review","venue":"Pharmaceutical Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":174,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"TLR4; Sepsis; Lipopolysaccharide; Septic shock; Medicine; Immunology; Toll-like receptor; Receptor; Intensive care; Inflammation; Pharmacology; Intensive care medicine; Immune system; Innate immune system; Internal medicine","score_opus":0.22445297526804314,"score_gpt":0.47696831995546535,"score_spread":0.2525153446874222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008793028","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024131399,0.99634546,0.00081273745,0.000632195,0.0006759719,0.000012762306,0.000033933225,0.000022451648,0.0012231413],"genre_scores_gemma":[0.0007678889,0.9961888,0.00085559936,0.0005285266,0.00042797247,0.000013587324,0.00006630081,0.0000031939474,0.0011482409],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997359,0.000027500417,0.000031813874,0.00004748878,0.00012881572,0.000028509423],"domain_scores_gemma":[0.9996147,0.00012275306,0.000064052976,0.000014901593,0.00013075497,0.000052797943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009743348,0.001548046,0.0022151677,0.0020307135,0.00033086265,0.0012924481,0.0015550265,0.0018643838,0.0035904518],"category_scores_gemma":[0.0008744052,0.000422083,0.00061860634,0.00197918,0.0007363079,0.002178415,0.0007544229,0.0032231535,0.0037457088],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021608367,0.00015882506,0.00011641207,0.006734315,0.00008521212,0.00025377606,0.000034807414,0.00045579567,0.00730819,0.0039308514,0.050494436,0.93021125],"study_design_scores_gemma":[0.000094707655,0.00019794662,0.0004244865,0.0007364769,0.00010397604,0.0011369905,0.00003210799,0.00014899534,0.0017462091,0.0017160785,0.9936407,0.000021354559],"about_ca_topic_score_codex":0.00079698354,"about_ca_topic_score_gemma":0.0014785469,"teacher_disagreement_score":0.0035904518,"about_ca_system_score_codex":0.0007611061,"about_ca_system_score_gemma":0.0011362231,"threshold_uncertainty_score":0.01201129},"labels":[],"label_agreement":null},{"id":"W2008944418","doi":"10.1016/s0301-0082(02)00010-2","title":"Involvement of inflammatory cytokines in central nervous system injury","year":2002,"lang":"en","type":"review","venue":"Progress in Neurobiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":247,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Central nervous system; Tumor necrosis factor alpha; Proinflammatory cytokine; Neuroscience; Inflammation; Immunology; Interleukin; Cytokine; Medicine; Biology","score_opus":0.024450152779782408,"score_gpt":0.27920278704621326,"score_spread":0.25475263426643086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008944418","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012113373,0.99797875,0.00024305418,0.00026238873,0.0007444799,0.0000044330427,0.00000969061,0.0000065223435,0.00062958704],"genre_scores_gemma":[0.00056463515,0.9973066,0.0003483666,0.00020980844,0.0008201002,0.000007154337,0.000021139902,0.0000012182762,0.00072102534],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975437,0.000030439267,0.000042931242,0.00005060896,0.00009570722,0.00002600276],"domain_scores_gemma":[0.9994733,0.000206279,0.000064066095,0.000018416787,0.00017532268,0.00006268468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010127279,0.0014380998,0.0022304908,0.0018787116,0.00041422868,0.0013665422,0.001526851,0.0017274924,0.0024246825],"category_scores_gemma":[0.00088179053,0.00032929174,0.00042995805,0.0024085818,0.00083155633,0.0019183992,0.00072462443,0.0024260334,0.002349755],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028172857,0.00012282998,0.00027940824,0.010907673,0.00007525027,0.00075768353,0.000066361026,0.00037500798,0.005822382,0.0020915787,0.03770481,0.9415153],"study_design_scores_gemma":[0.00006678031,0.00018273889,0.0014900704,0.0025612847,0.00019279201,0.0035985827,0.00013127628,0.00013748297,0.0017095387,0.0025850092,0.98731273,0.000031819014],"about_ca_topic_score_codex":0.0010617818,"about_ca_topic_score_gemma":0.001947631,"teacher_disagreement_score":0.0024246825,"about_ca_system_score_codex":0.0006263565,"about_ca_system_score_gemma":0.0012242775,"threshold_uncertainty_score":0.008111358},"labels":[],"label_agreement":null},{"id":"W2009202501","doi":"10.1016/j.immuni.2009.03.020","title":"A Central Nervous System-Restricted Isoform of the Interleukin-1 Receptor Accessory Protein Modulates Neuronal Responses to Interleukin-1","year":2009,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":140,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Neurological Disorders and Stroke","keywords":"Biology; Gene isoform; Receptor; Interleukin-1 receptor; Central nervous system; Interleukin; Interleukin 1β; Neuroscience; Interleukin 15; Cell biology; Nervous system; Interleukin 4; Immunology; Cytokine; Gene; Genetics","score_opus":0.011410298032981431,"score_gpt":0.23385413738079536,"score_spread":0.22244383934781392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009202501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99727386,0.0009800186,0.00084174663,0.00009297838,0.000026142328,0.000005425861,0.00003684055,0.000017252169,0.00072584074],"genre_scores_gemma":[0.9979019,0.00044734325,0.00065953436,0.00004118088,0.000014428812,0.000007477385,0.00010841567,0.000014844967,0.000804895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987566,0.000024896464,0.000006857356,0.000022324328,0.000015838956,0.000054338703],"domain_scores_gemma":[0.9998161,0.000027359838,0.0000501296,0.000025929554,0.000026582988,0.000053831194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015065874,0.00028844413,0.00019855189,0.00014374823,0.00018966333,0.000365979,0.00026929527,0.00027710738,0.0012771423],"category_scores_gemma":[0.00025550486,0.00009982364,0.00015583965,0.0000817616,0.00031719657,0.00030045735,0.00027714888,0.00084217964,0.0004524064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003541221,0.000020041749,0.00037620577,0.000013231952,0.0000034240043,0.00013413146,0.000014695629,0.000021869753,0.9974758,0.0002227409,0.000041835454,0.0013219018],"study_design_scores_gemma":[0.00016717619,0.00085557357,0.05952672,0.00003973654,0.000082498955,0.0041302326,0.00034265936,0.0037181615,0.9243695,0.0008225774,0.005923571,0.00002154679],"about_ca_topic_score_codex":0.00024294315,"about_ca_topic_score_gemma":0.00032890707,"teacher_disagreement_score":0.0012771423,"about_ca_system_score_codex":0.00031419823,"about_ca_system_score_gemma":0.00021403239,"threshold_uncertainty_score":0.004272461},"labels":[],"label_agreement":null},{"id":"W2009299676","doi":"10.1164/rccm.200606-824oc","title":"CD14 Facilitates Invasive Respiratory Tract Infection by <i>Streptococcus pneumoniae</i>","year":2006,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Streptococcus pneumoniae; Bronchoalveolar lavage; CD14; Immunology; Pneumonia; Medicine; Microbiology; Lung; Chemokine; Inflammation; Respiratory tract; Biology; Immune system; Respiratory system; Antibiotics; Internal medicine","score_opus":0.009759476141448347,"score_gpt":0.26748401331858157,"score_spread":0.25772453717713323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009299676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99677235,0.00061139354,0.0010060789,0.00018176241,0.00002871514,0.000033889217,0.00022607866,0.00008182609,0.0010578253],"genre_scores_gemma":[0.9953236,0.0004902696,0.0018048126,0.00009136546,0.00003133609,0.00005240346,0.00043014827,0.00003128819,0.0017448358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997192,0.00004698574,0.000034402397,0.000049259328,0.00005336871,0.000096653544],"domain_scores_gemma":[0.99953973,0.000050867533,0.00021151919,0.000036836846,0.000035950598,0.00012507012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020825249,0.0007358365,0.00037668133,0.00033676685,0.00019431558,0.00044890164,0.0003290407,0.0005912495,0.0025256106],"category_scores_gemma":[0.00027697664,0.00025863101,0.00032413442,0.00011525429,0.00051592547,0.0002695619,0.0004279338,0.0007715075,0.00080205913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069471373,0.0001185133,0.002049644,0.00008459649,0.0000062100316,0.00019789145,0.000014939018,0.000054238084,0.99550796,0.00010267051,0.00011950913,0.0010491925],"study_design_scores_gemma":[0.000106460466,0.002310707,0.036769055,0.000052949566,0.00007185903,0.0034973954,0.00011553386,0.0011752098,0.9529006,0.000111367735,0.0028746892,0.000014181631],"about_ca_topic_score_codex":0.0002967086,"about_ca_topic_score_gemma":0.00037142987,"teacher_disagreement_score":0.0025256106,"about_ca_system_score_codex":0.00031881128,"about_ca_system_score_gemma":0.00026889425,"threshold_uncertainty_score":0.008448958},"labels":[],"label_agreement":null},{"id":"W2009389373","doi":"10.1016/s0168-3659(02)00275-4","title":"Enhancement of immune responses by co-delivery of a CpG oligodeoxynucleotide and tetanus toxoid in biodegradable nanospheres","year":2002,"lang":"en","type":"article","venue":"Journal of Controlled Release","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":178,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Toxoid; CpG Oligodeoxynucleotide; CpG site; Antigen; Tetanus; Immune system; Molecular biology; Chemistry; In vivo; Adjuvant; T cell; Immunology; Biology; Immunization; Biochemistry; Vaccination","score_opus":0.007323197279280742,"score_gpt":0.21485850824718455,"score_spread":0.2075353109679038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009389373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99459934,0.000668983,0.0037804625,0.000056540342,0.00002926758,0.000025416404,0.000043193922,0.00004682007,0.0007500039],"genre_scores_gemma":[0.99453676,0.00027256165,0.0030137517,0.000029988056,0.000011147286,0.000029322675,0.000055017994,0.000020594633,0.0020308658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998971,0.000013822185,0.000007911687,0.000019846626,0.000031838434,0.000029490055],"domain_scores_gemma":[0.99990845,0.000026908701,0.00002053083,0.000009072611,0.000014308341,0.000020716177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017587382,0.000237832,0.0002464137,0.00012562852,0.000102555656,0.00020057053,0.00014398913,0.0002893633,0.0005756837],"category_scores_gemma":[0.00016198911,0.0001295326,0.00020622103,0.00007641095,0.00017627791,0.00021441802,0.00020408226,0.0002855057,0.0001925823],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005531625,0.000009837549,0.000033612207,0.000017082804,0.000002111293,0.000019221645,0.0000060125585,0.0000871796,0.99910754,0.000038864615,0.000013296199,0.0006099685],"study_design_scores_gemma":[0.000007799499,0.00006861553,0.00023403073,0.0000010435057,0.0000052085993,0.000024654195,0.0000029191358,0.0005682415,0.9987551,0.000010707093,0.0003200902,0.0000014947286],"about_ca_topic_score_codex":0.00050141034,"about_ca_topic_score_gemma":0.000750501,"teacher_disagreement_score":0.0005756837,"about_ca_system_score_codex":0.00025725478,"about_ca_system_score_gemma":0.00022794983,"threshold_uncertainty_score":0.0019258857},"labels":[],"label_agreement":null},{"id":"W2009421264","doi":"10.1111/j.1574-695x.2002.tb00551.x","title":"Parenteral and mucosal prime-boost immunization strategies in mice with hepatitis B surface antigen and CpG DNA","year":2002,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Honeywell (Canada)","funders":"","keywords":"Adjuvant; Immune system; CpG Oligodeoxynucleotide; Immunology; Cholera toxin; Antigen; Medicine; HBsAg; Nasal administration; Immunization; Biology; Hepatitis B virus; Internal medicine","score_opus":0.005991142565279369,"score_gpt":0.20607085113015955,"score_spread":0.2000797085648802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009421264","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9861821,0.0028643764,0.0064281602,0.00026851648,0.00027538792,0.00066736457,0.00068575575,0.00045747161,0.0021708503],"genre_scores_gemma":[0.96198136,0.0031264005,0.022540636,0.0004300644,0.0001623392,0.001698721,0.001213852,0.00012343157,0.008723306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933076,0.00010130311,0.00006176127,0.0001750708,0.00013689014,0.00019426513],"domain_scores_gemma":[0.9995683,0.00005742725,0.000117822165,0.000070528615,0.00003936872,0.00014653057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076810695,0.001596815,0.00093540497,0.0011733449,0.00026443493,0.0005154413,0.000580147,0.0013841782,0.0011637022],"category_scores_gemma":[0.0002849341,0.00058918126,0.0007567591,0.00033923905,0.00077570806,0.0007494557,0.0003952152,0.0029201838,0.00049909577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019425749,0.0016034835,0.00020471639,0.00018994046,0.000019276376,0.000059624123,0.00006412511,0.00019647357,0.99058807,0.00020319303,0.000094035415,0.0048345677],"study_design_scores_gemma":[0.00048005013,0.024203923,0.0018072752,0.000043948545,0.00010413524,0.0002908116,0.000039342878,0.001150582,0.9694262,0.0001520503,0.0022803391,0.000021345848],"about_ca_topic_score_codex":0.00045290176,"about_ca_topic_score_gemma":0.00066874345,"teacher_disagreement_score":0.001596815,"about_ca_system_score_codex":0.00037996567,"about_ca_system_score_gemma":0.0006502012,"threshold_uncertainty_score":0.0040621758},"labels":[],"label_agreement":null},{"id":"W2009483851","doi":"10.1159/000162496","title":"Cells Involved in Cell-Mediated and Transplantation Immunity in the Rabbit","year":2008,"lang":"en","type":"article","venue":"Pathologia et Microbiologia","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Immunity; Humoral immunity; Immunology; Transplantation; Immune system; Biology; Delayed hypersensitivity; Cell mediated immunity; Antigen; Cellular immunity; Cell biology; Medicine; Internal medicine","score_opus":0.015703424839172538,"score_gpt":0.22139261295925547,"score_spread":0.20568918812008294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2009483851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865354,0.0031152514,0.004492332,0.00005852831,0.000041416708,0.000072164476,0.00009426431,0.00006214106,0.005528546],"genre_scores_gemma":[0.9944469,0.0010244435,0.002098031,0.000046563862,0.000017120266,0.000053089323,0.0001487414,0.000010697928,0.0021543945],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994648,0.00010798712,0.00007632018,0.00012797033,0.00011747227,0.00010540887],"domain_scores_gemma":[0.9996258,0.000060480437,0.00009222112,0.00013299106,0.000037259495,0.00005115072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067025307,0.00043756855,0.0005101558,0.0005755666,0.00026608488,0.0006231988,0.00024784982,0.0006209855,0.001280712],"category_scores_gemma":[0.00052865216,0.00033072828,0.0004196019,0.00032745596,0.000747465,0.0005661247,0.0003242256,0.00092228386,0.0009053175],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027934855,0.000052105697,0.0010699693,0.000049279035,0.000006112598,0.00016220934,0.00011525512,0.000036698122,0.9952077,0.0009236538,0.000018258248,0.002079342],"study_design_scores_gemma":[0.00014752359,0.0034690737,0.022259334,0.000051257113,0.00010019074,0.004492077,0.00021479996,0.0011905805,0.9620496,0.00083323696,0.0051717274,0.000020581472],"about_ca_topic_score_codex":0.0003621163,"about_ca_topic_score_gemma":0.0002803609,"teacher_disagreement_score":0.001280712,"about_ca_system_score_codex":0.00024491138,"about_ca_system_score_gemma":0.00027365226,"threshold_uncertainty_score":0.0042844415},"labels":[],"label_agreement":null},{"id":"W2010094069","doi":"10.1016/j.vaccine.2005.08.076","title":"DNA vaccines in sheep: CTLA-4 mediated targeting and CpG motifs enhance immunogenicity in a DNA prime/protein boost strategy","year":2005,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Australian Research Council; Monash University; Australian Government","keywords":"Immune system; Biology; Immunogenicity; Immunology; DNA vaccination; Antigen; Adjuvant; CpG site; Cytotoxic T cell; Vaccination; Antibody; DNA methylation; Immunization; Genetics; In vitro; Gene","score_opus":0.005450381727542376,"score_gpt":0.22512199236332556,"score_spread":0.2196716106357832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010094069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9594947,0.003990946,0.032348897,0.0007451142,0.0002148683,0.00010357704,0.0001318353,0.00033534633,0.0026346561],"genre_scores_gemma":[0.98184663,0.0007762746,0.013919537,0.00011703397,0.000044781948,0.00005825664,0.00010659021,0.00003135884,0.0030995142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989593,0.00003267945,0.000006721403,0.000019688061,0.000019478704,0.00002563594],"domain_scores_gemma":[0.9998801,0.000037598045,0.000028301816,0.000013460572,0.000016785261,0.000023779461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003889485,0.0004196825,0.00039662907,0.0003657814,0.000091316266,0.00031397722,0.00031243556,0.0007781872,0.0013080649],"category_scores_gemma":[0.00030540803,0.00021258877,0.00018214608,0.00012608588,0.00031501584,0.00043433977,0.00024103069,0.0010418498,0.00055580563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048767222,0.000079971855,0.00014538778,0.00006950521,0.0000067224187,0.000056211557,0.000014945134,0.00026604565,0.9922334,0.0004253224,0.000086100226,0.006128756],"study_design_scores_gemma":[0.00014233476,0.002143019,0.00056294625,0.000016513224,0.00004484943,0.0003999304,0.000016192902,0.0018809005,0.9918733,0.00042493027,0.002489121,0.0000059987956],"about_ca_topic_score_codex":0.0002390884,"about_ca_topic_score_gemma":0.00029967577,"teacher_disagreement_score":0.0013080649,"about_ca_system_score_codex":0.00024064035,"about_ca_system_score_gemma":0.00022385178,"threshold_uncertainty_score":0.004375875},"labels":[],"label_agreement":null},{"id":"W2010264338","doi":"10.1006/cyto.1999.0656","title":"PRODUCTION OF TUMOUR NECROSIS FACTOR α BY PRIMARY CULTURED RAT ALVEOLAR EPITHELIAL CELLS","year":2000,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":77,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Toronto General Hospital; University of Toronto; SickKids Foundation; Hospital for Sick Children; St. Michael's Hospital","funders":"Alliance for Cancer Gene Therapy","keywords":"Tumor necrosis factor alpha; Cycloheximide; Biology; Cytokine; Molecular biology; Cytokeratin; A549 cell; Inflammation; Necrosis; Cell biology; Immunology; Cell; Protein biosynthesis; Immunohistochemistry","score_opus":0.006005870952032982,"score_gpt":0.20212904941114987,"score_spread":0.1961231784591169,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010264338","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9684738,0.01093135,0.0140685765,0.00024449875,0.00038844824,0.00019009339,0.0017550343,0.00029233715,0.0036558318],"genre_scores_gemma":[0.9789862,0.005704445,0.006473585,0.00013535813,0.00019635864,0.0001602599,0.0033295124,0.000044565506,0.0049697314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989497,0.00020421915,0.000121274934,0.00012203044,0.00024596724,0.00035697725],"domain_scores_gemma":[0.99872017,0.000517291,0.00011526725,0.00032315383,0.0001967978,0.0001274209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011849243,0.0012901194,0.0012722034,0.0007376043,0.0003911408,0.001038676,0.0004916007,0.0005910176,0.0019026634],"category_scores_gemma":[0.00053613866,0.00043563553,0.0014397625,0.0007343272,0.0005453247,0.0006840432,0.0004992982,0.0015469497,0.001604678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004625699,0.000059464433,0.00020370852,0.000087923814,0.000009267324,0.0001260395,0.00005306352,0.00009919377,0.9979175,0.000063323714,0.00003562839,0.00088242313],"study_design_scores_gemma":[0.000030542076,0.0005874476,0.0016886428,0.000011511919,0.000027807311,0.00016239122,0.00006467392,0.0004250459,0.9961014,0.000049237555,0.0008466403,0.000004772839],"about_ca_topic_score_codex":0.0010594865,"about_ca_topic_score_gemma":0.0009092167,"teacher_disagreement_score":0.0019026634,"about_ca_system_score_codex":0.0006730288,"about_ca_system_score_gemma":0.0005804205,"threshold_uncertainty_score":0.006365061},"labels":[],"label_agreement":null},{"id":"W2010295052","doi":"10.1159/000225990","title":"Toll-Like Receptor 2-Independent and MyD88-Dependent Gene Expression in the Mouse Brain","year":2009,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Alzheimer Society","keywords":"TLR2; Innate immune system; Biology; TLR4; Toll-like receptor; Receptor; CD14; Microglia; Immune receptor; Chemokine; Immune system; Signal transduction; Cell biology; Lipopolysaccharide; Molecular biology; Immunology; Inflammation; Genetics","score_opus":0.01085492468172179,"score_gpt":0.24544881368186375,"score_spread":0.23459388900014197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010295052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9640249,0.008560696,0.016368818,0.00044354735,0.00016185814,0.00023505882,0.005124762,0.00057932246,0.004501146],"genre_scores_gemma":[0.92110425,0.009598143,0.030326571,0.0005238974,0.000117722266,0.0016020194,0.007712597,0.0003694504,0.02864539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99953043,0.0000339414,0.000044977958,0.0001746683,0.00012368686,0.000092317736],"domain_scores_gemma":[0.99976844,0.000012749379,0.0000897288,0.00002888623,0.00003573647,0.00006446647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029803344,0.00077673135,0.00039746155,0.0016364697,0.0002844309,0.0005677011,0.0003852981,0.0006085038,0.0024201756],"category_scores_gemma":[0.00012897687,0.0005876138,0.0006388382,0.00043028488,0.0005938612,0.0004857717,0.00034180333,0.0011470984,0.0015356687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023276488,0.000039474573,0.00015794829,0.000046850444,0.0000059555705,0.00005910123,0.000024861922,0.000018891726,0.99828464,0.000094263356,0.000048925336,0.0009863841],"study_design_scores_gemma":[0.00012946302,0.000925178,0.016695099,0.00005804535,0.000062941326,0.0013491908,0.00011818506,0.0007026432,0.9742337,0.00038016026,0.0053239055,0.00002139666],"about_ca_topic_score_codex":0.00034298105,"about_ca_topic_score_gemma":0.0005038713,"teacher_disagreement_score":0.0024201756,"about_ca_system_score_codex":0.00039599455,"about_ca_system_score_gemma":0.00039742579,"threshold_uncertainty_score":0.008096337},"labels":[],"label_agreement":null},{"id":"W2010597203","doi":"10.1097/shk.0b013e3181f21d2d","title":"Altered Inhibitory κB Alpha Expression in LPS-Stimulated Alveolar Macrophages Following Resuscitated Hemorrhagic Shock","year":2010,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Chemokine; Cytokine; Immunology; IκBα; Immune system; Alveolar macrophage; Interleukin 10; In vivo; ARDS; NF-κB; Medicine; Biology; Macrophage; Pharmacology; Chemistry; Lung; In vitro; Inflammation; Internal medicine","score_opus":0.006710196687097068,"score_gpt":0.24019137900030688,"score_spread":0.2334811823132098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010597203","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99796546,0.0007970131,0.00048788107,0.00004767598,0.000029677003,0.000019466477,0.00015475918,0.000019383819,0.00047871142],"genre_scores_gemma":[0.99756336,0.0006246477,0.0005199907,0.000055029235,0.000033613553,0.000051130348,0.00029139378,0.000007648067,0.0008530767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998653,0.000023119313,0.00002055059,0.00002136919,0.000027749129,0.000041945514],"domain_scores_gemma":[0.99982685,0.000018415345,0.00004857964,0.000020006144,0.000027690938,0.000058510006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019107516,0.0002729521,0.00031391377,0.00032090713,0.00016689704,0.00031227473,0.00013223867,0.0002736087,0.0012706576],"category_scores_gemma":[0.00021129404,0.00017463042,0.00021113032,0.00017985214,0.0002790619,0.00018927836,0.00017126394,0.0005601947,0.00058835244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010042142,0.00006861371,0.0010198726,0.000035267036,0.0000055400587,0.00031064913,0.0000798869,0.00002935617,0.9965544,0.000021841632,0.00002095735,0.00084937527],"study_design_scores_gemma":[0.00016427385,0.0053151026,0.13224381,0.000028532553,0.00006855068,0.0022462495,0.0009026191,0.0012135654,0.8553953,0.0001637878,0.0022300382,0.000028184111],"about_ca_topic_score_codex":0.0001905897,"about_ca_topic_score_gemma":0.00017956684,"teacher_disagreement_score":0.0012706576,"about_ca_system_score_codex":0.0001281011,"about_ca_system_score_gemma":0.00015162723,"threshold_uncertainty_score":0.004250765},"labels":[],"label_agreement":null},{"id":"W2010603109","doi":"10.1371/journal.ppat.1003539","title":"SIGIRR, a Negative Regulator of TLR/IL-1R Signalling Promotes Microbiota Dependent Resistance to Colonization by Enteric Bacterial Pathogens","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia; BC Children's Hospital","funders":"National Institutes of Health; Canadian Institutes of Health Research; CH.I.L.D. Foundation; Child and Family Research Institute; Crohn's and Colitis Foundation of Canada; University of British Columbia; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation","keywords":"Citrobacter rodentium; Biology; Innate immune system; Microbiology; Colonisation resistance; Pathogen; Salmonella; Immunology; Immune system; Bacteria; Colonization","score_opus":0.008037445887869012,"score_gpt":0.19672232733537598,"score_spread":0.18868488144750697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010603109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944694,0.0018870244,0.001442113,0.00017853,0.000051543055,0.000018378594,0.00028025065,0.00020404832,0.0014686247],"genre_scores_gemma":[0.9932422,0.0010999709,0.0012563913,0.00009973767,0.00002452793,0.000030248868,0.00037904433,0.000038747894,0.0038291705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977773,0.000042668933,0.000019004196,0.000049275273,0.000049740804,0.000061731764],"domain_scores_gemma":[0.99975854,0.000018748124,0.000084282074,0.00002228738,0.000019690728,0.00009650225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016753098,0.00047632083,0.00030300114,0.00027433198,0.00012630766,0.00038222942,0.000226128,0.00041111317,0.0013055109],"category_scores_gemma":[0.0001643529,0.00020505361,0.00030010834,0.000113019494,0.00035517782,0.00017141276,0.00025818238,0.0010864773,0.00048122363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023803912,0.000036916575,0.00040401018,0.000033476328,0.0000033178028,0.000095185096,0.000011043027,0.000031523767,0.9980586,0.000043965003,0.00006625519,0.0009776558],"study_design_scores_gemma":[0.00009787635,0.0022918312,0.054020368,0.000039021324,0.000073336414,0.00189716,0.00018305199,0.0017604114,0.9343892,0.00019111828,0.005034482,0.00002218668],"about_ca_topic_score_codex":0.000178544,"about_ca_topic_score_gemma":0.00030861277,"teacher_disagreement_score":0.0013055109,"about_ca_system_score_codex":0.00012738962,"about_ca_system_score_gemma":0.00016920557,"threshold_uncertainty_score":0.004367411},"labels":[],"label_agreement":null},{"id":"W2010792112","doi":"10.1016/j.cellimm.2003.11.007","title":"Skin immune responses to peptide and protein antigen are TLR4 independent","year":2003,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's & Women's Health Centre of British Columbia; BC Research (Canada); Women's Health Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; Galderma; Michael Smith Health Research BC; Arthritis Society","keywords":"Biology; Immune system; Cholera toxin; TLR4; Antigen; T cell; Acquired immune system; Immunology; CD8; Toll-like receptor; Innate immune system; Microbiology","score_opus":0.008482010686734901,"score_gpt":0.21072766749251742,"score_spread":0.20224565680578252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010792112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9473534,0.007830642,0.016006008,0.0006944366,0.00037530597,0.0003450249,0.0009870273,0.00044605508,0.025962025],"genre_scores_gemma":[0.96935534,0.002366151,0.0068394803,0.00034089392,0.00012532609,0.00024282497,0.00095881417,0.000073735224,0.019697348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898285,0.00023441183,0.00006910314,0.00015043947,0.00023251376,0.00033070607],"domain_scores_gemma":[0.9993074,0.00011027701,0.00017729324,0.00014485538,0.00016095556,0.00009927341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052479364,0.0011057351,0.0004988033,0.0008030247,0.00035564706,0.0009190492,0.0005246199,0.00072871917,0.0072780894],"category_scores_gemma":[0.0005846014,0.00059317163,0.0011053871,0.00017244605,0.00055196864,0.0011162168,0.001203204,0.002409534,0.0028125113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007422945,0.00010834312,0.00096581335,0.00018006792,0.000028183615,0.0002594128,0.0000335336,0.00008502262,0.9880705,0.0007694402,0.00028856692,0.00846885],"study_design_scores_gemma":[0.0001612616,0.0012917937,0.059069853,0.00013958331,0.00018511106,0.0031445732,0.00032059278,0.0027632043,0.91759676,0.0018521356,0.013424768,0.000050409828],"about_ca_topic_score_codex":0.00035590772,"about_ca_topic_score_gemma":0.00050520274,"teacher_disagreement_score":0.0072780894,"about_ca_system_score_codex":0.0005576881,"about_ca_system_score_gemma":0.0004068115,"threshold_uncertainty_score":0.024347603},"labels":[],"label_agreement":null},{"id":"W2010801497","doi":"10.1080/13550280600848399","title":"Expression of Toll-like receptor 3 in the human cerebellar cortex in rabies, herpes simplex encephalitis, and other neurological diseases","year":2006,"lang":"en","type":"article","venue":"Journal of NeuroVirology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Neuroimmunology; Amyotrophic lateral sclerosis; Biology; Encephalitis; Human brain; Immunology; Receptor; Innate immune system; Neuroscience; Rabies; Toll-like receptor; Immune system; Herpes simplex virus; Virology; Medicine; Pathology; Disease; Virus","score_opus":0.010220515945823754,"score_gpt":0.23935270207211742,"score_spread":0.22913218612629366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010801497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746656,0.0016184048,0.00027087066,0.00003318145,0.0000037620982,0.000004197596,0.00010225589,0.000009649192,0.0004911193],"genre_scores_gemma":[0.99867356,0.0003984335,0.00016488516,0.000007914949,0.0000016584399,0.000003576049,0.00006725589,0.0000016721872,0.0006810851],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99995184,0.0000071168993,0.0000031021443,0.000008846649,0.000010731225,0.000018421722],"domain_scores_gemma":[0.9999299,0.000007389558,0.000027429158,0.0000036296703,0.00001455048,0.000017156677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009199863,0.000088626606,0.00013487131,0.00048400863,0.00022428203,0.00024223399,0.00009141524,0.000118992946,0.00088088703],"category_scores_gemma":[0.00016174169,0.00012438229,0.000105330895,0.00017851999,0.00021818839,0.00013886807,0.0001474506,0.00014377662,0.00011705487],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012199791,0.00003923985,0.023855582,0.00013652952,0.000060474067,0.000822025,0.00017271843,0.00015087801,0.96554947,0.00026395754,0.00016846883,0.0075607547],"study_design_scores_gemma":[0.000065019296,0.0003147964,0.82435936,0.000028492406,0.00011026075,0.0049285055,0.0005240903,0.0012234265,0.16613941,0.0003830949,0.0019074013,0.000016161726],"about_ca_topic_score_codex":0.007195995,"about_ca_topic_score_gemma":0.010438143,"teacher_disagreement_score":0.007195995,"about_ca_system_score_codex":0.0005228571,"about_ca_system_score_gemma":0.00035719053,"threshold_uncertainty_score":0.014308274},"labels":[],"label_agreement":null},{"id":"W2010827041","doi":"10.1371/journal.pone.0040044","title":"T-Lymphocytes Enable Osteoblast Maturation via IL-17F during the Early Phase of Fracture Repair","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":176,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; Sunnybrook Health Science Centre; University of Toronto; Sunnybrook Hospital","funders":"University of Toronto; Canadian Institutes of Health Research; Sunnybrook Research Institute","keywords":"Bone healing; Osteoblast; Bone fracture; Cytokine; Immune system; Stereology; Inflammation; Cell biology; Immunology; Biology; Medicine; Pathology; In vitro; Anatomy","score_opus":0.015512302320917121,"score_gpt":0.21617995663573422,"score_spread":0.2006676543148171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010827041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941274,0.0026253846,0.001623378,0.00009772746,0.000031280768,0.000027727285,0.00017297026,0.00005130062,0.00124279],"genre_scores_gemma":[0.99496514,0.0013024193,0.0017636183,0.00005573609,0.000021058817,0.000050477985,0.00017319017,0.000022789824,0.0016455984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965286,0.00006071121,0.000031652267,0.00003543473,0.00007497477,0.00014433033],"domain_scores_gemma":[0.9997515,0.00003861206,0.000094700146,0.000027468055,0.000031425585,0.000056210865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002781508,0.00028826052,0.00031949952,0.0004585589,0.00016879996,0.00044994336,0.00019490324,0.00037748262,0.0019190346],"category_scores_gemma":[0.00032626433,0.00025017196,0.00035871865,0.00014277085,0.00037795864,0.00025776596,0.00031320262,0.00066847424,0.0007615533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006339597,0.00006511886,0.0013303322,0.00005763184,0.0000043447385,0.00024840713,0.000058744212,0.000051031922,0.99414575,0.00015121873,0.00006181709,0.003191622],"study_design_scores_gemma":[0.000112611226,0.0011770864,0.032695226,0.000058922946,0.000035992227,0.0012066033,0.00038327818,0.00070365105,0.95909756,0.00048742112,0.0040297685,0.000011884223],"about_ca_topic_score_codex":0.00030198542,"about_ca_topic_score_gemma":0.00066003687,"teacher_disagreement_score":0.0019190346,"about_ca_system_score_codex":0.00017160214,"about_ca_system_score_gemma":0.00026803295,"threshold_uncertainty_score":0.006419778},"labels":[],"label_agreement":null},{"id":"W2010943625","doi":"10.1016/j.vetimm.2008.02.007","title":"Attenuated cytokine responses in porcine lymph node cells stimulated with CpG DNA are associated with low frequency of IFNα-producing cells and TLR9 mRNA expression","year":2008,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Canada Research Chairs","keywords":"TLR9; CpG Oligodeoxynucleotide; Biology; CpG site; Immune system; Peripheral blood mononuclear cell; Spleen; Immunology; Cytokine; Lymph node; Molecular biology; In vitro; DNA methylation; Gene expression; Gene; Biochemistry","score_opus":0.012804844972860666,"score_gpt":0.21760563094525473,"score_spread":0.20480078597239407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2010943625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959099,0.00048992207,0.0015404628,0.00006899176,0.00008571526,0.00004554305,0.00048339262,0.000033935798,0.0013421287],"genre_scores_gemma":[0.99411196,0.0004045385,0.001329914,0.00014542388,0.00005267175,0.000106424624,0.0010221505,0.000023407523,0.0028037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972075,0.000055765064,0.000028054157,0.000060378065,0.000047161484,0.00008786138],"domain_scores_gemma":[0.9997104,0.00012228303,0.000041830044,0.000047650836,0.000024234574,0.00005366123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024292692,0.00057034014,0.0004810475,0.00024466397,0.00017977018,0.00035100817,0.00014036482,0.0005133002,0.003530544],"category_scores_gemma":[0.00027686098,0.00023147423,0.00038158335,0.00013612275,0.0003541979,0.0002491318,0.00022109953,0.0012681783,0.0010925567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033356415,0.000024345856,0.00017169298,0.000030578016,0.0000014238586,0.000060572365,0.000015330801,0.000013318094,0.99910694,0.00000728626,0.000008494302,0.00022638396],"study_design_scores_gemma":[0.00006500485,0.0020811681,0.015700333,0.000015325419,0.000024807805,0.0006286451,0.0001556843,0.00038134237,0.9799486,0.00006402812,0.00092713843,0.000007976818],"about_ca_topic_score_codex":0.00022548922,"about_ca_topic_score_gemma":0.00023495273,"teacher_disagreement_score":0.003530544,"about_ca_system_score_codex":0.0001454258,"about_ca_system_score_gemma":0.00016870904,"threshold_uncertainty_score":0.01181078},"labels":[],"label_agreement":null},{"id":"W2011090966","doi":"10.1016/j.virol.2009.08.001","title":"Induction of innate host responses in the lungs of chickens following infection with a very virulent strain of Marek's disease virus","year":2009,"lang":"en","type":"article","venue":"Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Poultry Industry Council","keywords":"Biology; Innate immune system; Virology; Virus; Virulence; Viral replication; Marek's disease; Gene; Host (biology); Immunology; Microbiology; Immune system; Genetics","score_opus":0.009093537858108312,"score_gpt":0.23826263164810663,"score_spread":0.2291690937899983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011090966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990336,0.00035987416,0.00015892959,0.00003955342,0.00001819425,0.00001259552,0.00005935396,0.000007927245,0.00030995798],"genre_scores_gemma":[0.9987686,0.00015222777,0.00025074027,0.00004772673,0.000011948261,0.000022923066,0.00013201886,0.0000036641525,0.00061004225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999734,0.000059938706,0.000018722738,0.000047722544,0.00003687723,0.00010278571],"domain_scores_gemma":[0.9996631,0.000107940585,0.000059299167,0.000046432328,0.000036392394,0.00008686598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030697417,0.00040298433,0.00039915033,0.00030594863,0.00030644314,0.0003793444,0.00020591335,0.0006333795,0.00077508215],"category_scores_gemma":[0.00029355302,0.0002865179,0.00032078905,0.00006785315,0.00061468955,0.0003507961,0.00024856735,0.00087809976,0.0001666647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066045724,0.00005439785,0.0013717501,0.000037808793,0.0000056577246,0.00020786413,0.00008305098,0.00003065019,0.99707687,0.000035261004,0.000027179283,0.00040902526],"study_design_scores_gemma":[0.00012283145,0.0046550496,0.21530454,0.000046215184,0.00007298792,0.0014316646,0.0009871983,0.0011399083,0.77502096,0.00023454188,0.00095584407,0.000028265544],"about_ca_topic_score_codex":0.0006926328,"about_ca_topic_score_gemma":0.0010402189,"teacher_disagreement_score":0.00077508215,"about_ca_system_score_codex":0.00035789303,"about_ca_system_score_gemma":0.00021649677,"threshold_uncertainty_score":0.002596736},"labels":[],"label_agreement":null},{"id":"W2011543125","doi":"10.1097/01.tp.0000332763.95958.cd","title":"REDUCED INSULIN REQUIREMENTS IN TRANSIENTLY IMMUNOSUPPRESSED NON-HUMAN PRIMATES TRANSPLANTED WITH MICROISLET P(tm) (ALGINATE ENCAPSULATED PORCINE ISLETS): A NON CLINICAL SAFETY STUDY","year":2008,"lang":"en","type":"article","venue":"Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Microsemi (Canada)","funders":"","keywords":"Islet; Insulin; Medicine; Immunosuppression; Human insulin; Transplantation; Virology; Immunology; Biology; Endocrinology; Internal medicine","score_opus":0.02055989988868401,"score_gpt":0.30116222702468387,"score_spread":0.28060232713599986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011543125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983607,0.00044210412,0.000418385,0.000039896677,0.000021354375,0.000101251586,0.00010737108,0.00002708428,0.00048188807],"genre_scores_gemma":[0.99671614,0.00056037615,0.0005608338,0.000075194104,0.00003858498,0.00019335115,0.00035288287,0.000024433868,0.0014781632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977404,0.00008477449,0.00001587618,0.000044528566,0.00003888168,0.000041909017],"domain_scores_gemma":[0.9996716,0.000087755405,0.0000811265,0.000069853966,0.000029534958,0.000060132945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063609815,0.0005668795,0.0005799574,0.00027601683,0.00031478022,0.00054402655,0.0004222574,0.0006511764,0.001744365],"category_scores_gemma":[0.0005188581,0.00016974207,0.00035140928,0.00025593932,0.00074191723,0.0005667063,0.00013669938,0.0011740767,0.00032334216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0727154,0.008746799,0.0022992217,0.0002749345,0.0000884108,0.00083858793,0.00033643312,0.0003509055,0.88679856,0.00025454868,0.00037369624,0.026922572],"study_design_scores_gemma":[0.0043852627,0.38011563,0.0141413715,0.000042981865,0.00026022614,0.0016590826,0.00035813308,0.0013112662,0.5930102,0.00029157236,0.004394178,0.000030130803],"about_ca_topic_score_codex":0.0004294739,"about_ca_topic_score_gemma":0.00041222377,"teacher_disagreement_score":0.001744365,"about_ca_system_score_codex":0.00025734186,"about_ca_system_score_gemma":0.0002885729,"threshold_uncertainty_score":0.0058354735},"labels":[],"label_agreement":null},{"id":"W2011546561","doi":"10.1038/nrurol.2013.153","title":"Toll-like receptors in urothelial cells—targets for cancer immunotherapy","year":2013,"lang":"en","type":"review","venue":"Nature Reviews Urology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Medicine; Urothelial cancer; Immunotherapy; Receptor; Toll; Cancer research; Cancer immunotherapy; Cancer; Oncology; Immunology; Bladder cancer; Internal medicine","score_opus":0.02301731448057547,"score_gpt":0.3288442358235929,"score_spread":0.3058269213430174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011546561","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000073654366,0.9983169,0.00016660913,0.00039923127,0.00042503522,0.000002620777,0.0000137810075,0.000008000182,0.0005942397],"genre_scores_gemma":[0.0006893806,0.9974152,0.0002083068,0.00038726957,0.0005516939,0.0000039905467,0.000028628681,0.0000012289913,0.00071424595],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977416,0.00003241534,0.000027534194,0.000032921635,0.00010285956,0.000030108511],"domain_scores_gemma":[0.9996823,0.000112333946,0.000047493024,0.000010273546,0.0000966993,0.000050898525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007337225,0.00081540446,0.0014013855,0.0013522885,0.00023913196,0.0011586254,0.00087713765,0.0013406504,0.0029869399],"category_scores_gemma":[0.0007145866,0.0002791721,0.00038749923,0.0014100154,0.0006720492,0.0016362579,0.0008690022,0.0023528636,0.0023114968],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012297482,0.000055255077,0.00018162768,0.0062945806,0.00005248716,0.00018728401,0.000027149936,0.00037675965,0.00452631,0.0034299025,0.056199554,0.9285461],"study_design_scores_gemma":[0.000026413803,0.00007977389,0.00056903815,0.0013371186,0.000057464564,0.00088185,0.000045796223,0.0001274252,0.0006686581,0.002151691,0.9940348,0.000020035166],"about_ca_topic_score_codex":0.00060413906,"about_ca_topic_score_gemma":0.0012738294,"teacher_disagreement_score":0.0029869399,"about_ca_system_score_codex":0.00062957586,"about_ca_system_score_gemma":0.0009975063,"threshold_uncertainty_score":0.009992301},"labels":[],"label_agreement":null},{"id":"W2011618490","doi":"10.1097/wnr.0b013e3282f27e60","title":"Expression of cytokines and cytokine receptors in human Schwann cells","year":2008,"lang":"en","type":"article","venue":"Neuroreport","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of British Columbia Hospital","funders":"","keywords":"Cytokine; Biology; Glycoprotein 130; Receptor; Schwann cell; Immunology; Interleukin 6; Cell biology","score_opus":0.015699463900697756,"score_gpt":0.2366712926646979,"score_spread":0.22097182876400015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011618490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854892,0.0052820556,0.006312103,0.000041475265,0.000023840283,0.000028909317,0.00080984604,0.00004969538,0.001962828],"genre_scores_gemma":[0.98554796,0.003196345,0.0050563086,0.000051724746,0.000036872563,0.0000490033,0.0022491636,0.000016309055,0.0037963456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998398,0.000025422982,0.000016021968,0.000035078694,0.00004424364,0.000039499246],"domain_scores_gemma":[0.9998565,0.000046837835,0.000024280247,0.000018851782,0.000033631146,0.00001989562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019785926,0.00020178244,0.00015571635,0.00031042757,0.00014482453,0.00034823903,0.00007152336,0.00013440028,0.0014812449],"category_scores_gemma":[0.00024159462,0.00009677742,0.00016255247,0.00024765896,0.00010354649,0.00015970333,0.00014237619,0.00016987581,0.0006190703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015873511,0.000008113356,0.0007998775,0.00003109885,0.000004551128,0.00009422169,0.000040183924,0.000034422403,0.99647874,0.000053331954,0.00001932261,0.0022774495],"study_design_scores_gemma":[0.00003266832,0.00072930846,0.026843818,0.000034337605,0.00008013978,0.0018972894,0.00024852663,0.0007204235,0.96064633,0.0001557609,0.008596616,0.000014802004],"about_ca_topic_score_codex":0.00038182407,"about_ca_topic_score_gemma":0.00037674277,"teacher_disagreement_score":0.0014812449,"about_ca_system_score_codex":0.00011216445,"about_ca_system_score_gemma":0.00013505458,"threshold_uncertainty_score":0.004955232},"labels":[],"label_agreement":null},{"id":"W2011908570","doi":"10.1080/15287390802241015","title":"<i>In Vitro</i> Production of Tumor Necrosis Factor-Alpha by Human Monocytes Stimulated with Lipopolysaccharide is Positively Correlated with Increased Blood Monocytes After Exposure to a Swine Barn","year":2008,"lang":"en","type":"article","venue":"Journal of Toxicology and Environmental Health","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan; Saskatchewan Health Authority","funders":"","keywords":"Tumor necrosis factor alpha; Lipopolysaccharide; TLR4; Immunology; Monocyte; Barn; In vitro; Inflammation; Monocytosis; Stimulation; Medicine; Biology; Internal medicine; Biochemistry","score_opus":0.0064580207127273885,"score_gpt":0.21633617279684997,"score_spread":0.20987815208412258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2011908570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973635,0.00069211394,0.00061140326,0.00007760794,0.00003415995,0.00003450308,0.0004514417,0.00002096767,0.00071437826],"genre_scores_gemma":[0.99594104,0.00045229343,0.00087977975,0.000108804656,0.000059613154,0.00007603848,0.0012450109,0.000005119186,0.0012322735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962616,0.00014634855,0.00004077268,0.000051257488,0.00007044834,0.00006505596],"domain_scores_gemma":[0.99936324,0.00017101922,0.00021129135,0.00007063725,0.00009866045,0.00008516645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036547202,0.0003174325,0.00025494734,0.0003303243,0.00018639595,0.00047851843,0.00010717251,0.00029415762,0.0027343533],"category_scores_gemma":[0.00057223317,0.00013975277,0.00020834705,0.00028829844,0.0002311507,0.00010618264,0.00021495453,0.00037161564,0.0009182601],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035844932,0.0004971223,0.06292878,0.00016910136,0.00004569494,0.000661873,0.00017350419,0.00010975098,0.9267583,0.000039154456,0.00046740304,0.0045647905],"study_design_scores_gemma":[0.00012000053,0.0069715558,0.58054435,0.000033810506,0.00009328954,0.0028312944,0.00040383416,0.00088493474,0.4054513,0.00010736331,0.0025366356,0.00002171434],"about_ca_topic_score_codex":0.00057931984,"about_ca_topic_score_gemma":0.0005751525,"teacher_disagreement_score":0.0027343533,"about_ca_system_score_codex":0.00015144618,"about_ca_system_score_gemma":0.00014427293,"threshold_uncertainty_score":0.009147346},"labels":[],"label_agreement":null},{"id":"W2012001629","doi":"10.1074/jbc.m403107200","title":"Transcriptional Mechanisms Regulating Alveolar Epithelial Cell-specific CCL5 Secretion in Pulmonary Tuberculosis","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Secretion; Cell biology; Cell; Pulmonary tuberculosis; Tuberculosis; Epithelium; Biology; Chemistry; Medicine; Pathology; Biochemistry; Genetics","score_opus":0.013115408105459902,"score_gpt":0.21024881979772872,"score_spread":0.1971334116922688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012001629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98111665,0.011444905,0.0042374893,0.00032636552,0.000054338463,0.00006012483,0.0007272958,0.00011376441,0.0019189926],"genre_scores_gemma":[0.99330986,0.0024164177,0.0011891173,0.00010038976,0.000032256503,0.00005503802,0.0010267248,0.0000110425535,0.0018592153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997336,0.0000494138,0.000032549397,0.000042471045,0.00005083356,0.00009105116],"domain_scores_gemma":[0.9998441,0.000021330052,0.00004686214,0.000017282367,0.000031005427,0.00003941783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023554958,0.00024170108,0.00025946135,0.00030455147,0.00022694316,0.0005031377,0.00014755214,0.0003003153,0.0009754322],"category_scores_gemma":[0.00017015351,0.00017444434,0.00038399835,0.00022410268,0.00025727146,0.0002247491,0.00024151955,0.00043444245,0.00047937286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019673591,0.00003346624,0.00095495104,0.00007150653,0.0000033105553,0.00013610459,0.00004228073,0.00003532367,0.99728036,0.00014796855,0.000049019618,0.001048853],"study_design_scores_gemma":[0.000080419486,0.0005557365,0.13057067,0.00008164105,0.00006353895,0.0013590371,0.0005728869,0.0019689917,0.85752046,0.00038835584,0.006816846,0.000021386466],"about_ca_topic_score_codex":0.00068391673,"about_ca_topic_score_gemma":0.0006609178,"teacher_disagreement_score":0.0009754322,"about_ca_system_score_codex":0.00046265803,"about_ca_system_score_gemma":0.00023466862,"threshold_uncertainty_score":0.0033568144},"labels":[],"label_agreement":null},{"id":"W2012810238","doi":"10.1007/s10753-014-0030-z","title":"Circulating Muramyl Dipeptide Is Negatively Associated with Interleukin-10 in the Frail Elderly","year":2014,"lang":"en","type":"article","venue":"Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Muramyl dipeptide; Immunology; Immune system; Inflammation; Tumor necrosis factor alpha; Medicine; Proinflammatory cytokine; Interleukin; Cytokine","score_opus":0.01101774872618242,"score_gpt":0.22100010617473584,"score_spread":0.20998235744855342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2012810238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985826,0.00082161557,0.00009089881,0.000045054552,0.000015313319,0.0000019340273,0.00013408298,0.0000033141894,0.00030509447],"genre_scores_gemma":[0.9991492,0.00025472563,0.00007950837,0.000038819006,0.000027626418,0.0000031841462,0.00013840414,0.000001084482,0.0003074266],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998615,0.000037121496,0.000017654962,0.000025443665,0.000022902499,0.000035353005],"domain_scores_gemma":[0.9991555,0.00015606622,0.00038179985,0.00003507345,0.00011852641,0.00015304674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030386497,0.00039652115,0.00048143746,0.00041084914,0.00028188433,0.0004973998,0.00020935223,0.0004907404,0.0011690764],"category_scores_gemma":[0.0013428554,0.00019908573,0.00035234907,0.0004272963,0.00020571868,0.00022647344,0.00029490568,0.00049658044,0.00018901973],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011993219,0.0000706459,0.9935545,0.00003820052,0.00014481117,0.00026535618,0.00009550162,0.000043651624,0.0015787304,0.000016597021,0.00015403124,0.002838841],"study_design_scores_gemma":[0.000013367699,0.00025267006,0.99859756,0.000010639085,0.00009947744,0.0003495475,0.00013311197,0.00020585977,0.00013000648,0.000042216467,0.0001603126,0.0000052174023],"about_ca_topic_score_codex":0.0035757124,"about_ca_topic_score_gemma":0.00354651,"teacher_disagreement_score":0.0035757124,"about_ca_system_score_codex":0.00014138776,"about_ca_system_score_gemma":0.00016807018,"threshold_uncertainty_score":0.007109821},"labels":[],"label_agreement":null},{"id":"W2013105255","doi":"10.1186/cc10622","title":"Oral neutrophil quantitation in patients undergoing elective cardiopulmonary bypass","year":2012,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Medicine; Cardiopulmonary bypass; Oral surgery; Extravasation; Bone marrow; Absolute neutrophil count; Intensive care medicine; Anesthesia; Surgery; Internal medicine; Immunology; Chemotherapy; Neutropenia","score_opus":0.015448701617724403,"score_gpt":0.2801675671173564,"score_spread":0.26471886549963203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013105255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728155,0.0014029995,0.0001902315,0.000060793984,0.000018157962,0.000035997436,0.0001761202,0.0000097385655,0.00082434283],"genre_scores_gemma":[0.99835616,0.0005239646,0.0003945356,0.000054827244,0.00002016541,0.00003543929,0.00027073297,0.000002383477,0.00034178028],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997142,0.000052397627,0.000037393012,0.00006152965,0.00008982718,0.00004453172],"domain_scores_gemma":[0.9994475,0.00010287843,0.00021999661,0.000026912025,0.000053813605,0.00014893808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028677753,0.0002598473,0.00046473436,0.0005956196,0.00031167155,0.00042007377,0.00019059697,0.00045680837,0.00096897664],"category_scores_gemma":[0.0013563707,0.00015228141,0.0001298029,0.0003771116,0.00025685382,0.00033771177,0.00027072374,0.00061416574,0.00022077154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001882876,0.00014880323,0.98035204,0.000070348404,0.000018766741,0.001092457,0.00013300439,0.00008932021,0.0072970698,0.000049086524,0.00022411306,0.00864206],"study_design_scores_gemma":[0.00002457816,0.0022891096,0.99187636,0.000019917992,0.000027403024,0.002681002,0.0002635254,0.00032617289,0.0017932061,0.000056838464,0.00062830234,0.000013573815],"about_ca_topic_score_codex":0.0010860923,"about_ca_topic_score_gemma":0.0014234871,"teacher_disagreement_score":0.0010860923,"about_ca_system_score_codex":0.0003171908,"about_ca_system_score_gemma":0.000333743,"threshold_uncertainty_score":0.0032414794},"labels":[],"label_agreement":null},{"id":"W2013205499","doi":"10.1074/jbc.m402666200","title":"The Role of Interleukin 1 Receptor-associated Kinase-4 (IRAK-4) Kinase Activity in IRAK-4-mediated Signaling","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Kinase; Signal transduction; Interleukin-1 receptor; Chemistry; Cell biology; Biology; Interleukin; Immunology; Cytokine","score_opus":0.01134495705186749,"score_gpt":0.22719104782489183,"score_spread":0.21584609077302433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013205499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9610419,0.021801807,0.011998859,0.0008601534,0.00032883536,0.000085343076,0.00027378235,0.00013372782,0.0034755995],"genre_scores_gemma":[0.9860805,0.007652653,0.0038429422,0.0001104997,0.000091465525,0.000058218644,0.00028140258,0.000010590437,0.0018715756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969923,0.00006785572,0.00003107888,0.000048904574,0.000046333724,0.00010656579],"domain_scores_gemma":[0.9998648,0.00001595117,0.00005056177,0.000018817991,0.000021987878,0.000027972063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035250917,0.0006640472,0.00036023048,0.0003292236,0.0004251514,0.0006225001,0.0005295428,0.00056472776,0.0010470977],"category_scores_gemma":[0.00030099836,0.00022970789,0.0005806056,0.00020304484,0.00061471533,0.0009579923,0.00062995637,0.0010157683,0.0005292683],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006919252,0.0001292229,0.0024050684,0.0003717576,0.000038927028,0.0004238988,0.00006200544,0.00078376394,0.9859926,0.002051684,0.00017364317,0.006875503],"study_design_scores_gemma":[0.00020526767,0.0009718743,0.023521902,0.00009123799,0.00018354735,0.0024306467,0.0002713412,0.006912055,0.94481385,0.0034198167,0.017097633,0.000080880964],"about_ca_topic_score_codex":0.00024905198,"about_ca_topic_score_gemma":0.00013728772,"teacher_disagreement_score":0.0010470977,"about_ca_system_score_codex":0.0005668868,"about_ca_system_score_gemma":0.00053902215,"threshold_uncertainty_score":0.004113078},"labels":[],"label_agreement":null},{"id":"W2013260241","doi":"10.1002/ar.20927","title":"Expression of Toll‐Like Receptor 9 in Horse Lungs","year":2009,"lang":"en","type":"article","venue":"The Anatomical Record","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"TLR9; Lipopolysaccharide; Toll-Like Receptor 9; Biology; Receptor; Lung; Toll-like receptor; Cell biology; Molecular biology; Pathology; Immunology; Innate immune system; Gene expression; Medicine; Internal medicine; Biochemistry","score_opus":0.007593341672955918,"score_gpt":0.23945254502979021,"score_spread":0.2318592033568343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013260241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99266475,0.0038490444,0.0014337082,0.00009147393,0.000036371835,0.000038674585,0.00022710922,0.000030131461,0.001628761],"genre_scores_gemma":[0.994589,0.00106486,0.0010309294,0.000072130024,0.000023955556,0.000036191996,0.0003242091,0.000006638358,0.0028520825],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999088,0.000014019505,0.000008540051,0.000025150995,0.000024808456,0.00001858553],"domain_scores_gemma":[0.9999318,0.000010948036,0.00002022673,0.000004906515,0.00001536428,0.000016712318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012857189,0.00013055811,0.00018129515,0.00035435663,0.0001630203,0.00023745227,0.00010121744,0.00027702496,0.0013781722],"category_scores_gemma":[0.00014419206,0.00015545629,0.00015587204,0.0001033417,0.00019537771,0.00020773448,0.00013867753,0.00025362335,0.00033249965],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023200252,0.0000196539,0.0023891018,0.0000782723,0.000006736361,0.00033824134,0.00007071589,0.000019667643,0.99497896,0.000056533343,0.00004005917,0.0017700087],"study_design_scores_gemma":[0.00006681689,0.0023240247,0.29804677,0.000061472594,0.000087050794,0.005718483,0.0009112428,0.0011819211,0.68144107,0.00035344687,0.009782909,0.000024654797],"about_ca_topic_score_codex":0.0003215748,"about_ca_topic_score_gemma":0.00038386916,"teacher_disagreement_score":0.0013781722,"about_ca_system_score_codex":0.00016698077,"about_ca_system_score_gemma":0.00010025406,"threshold_uncertainty_score":0.004610479},"labels":[],"label_agreement":null},{"id":"W2013409259","doi":"10.1016/j.humimm.2013.05.010","title":"HLA-DO increases bacterial superantigen binding to human MHC molecules by inhibiting dissociation of class II-associated invariant chain peptides","year":2013,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; Hôpital Saint-Luc; McGill University Health Centre; Royal Victoria Regional Health Centre; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Human leukocyte antigen; Superantigen; MHC class II; Major histocompatibility complex; Peptide; Biology; MHC class I; MHC restriction; Molecular biology; CIITA; T-cell receptor; Chemistry; HLA-DR; Cell biology; Antigen; Immunology; T cell; Biochemistry; Immune system","score_opus":0.009183651940097421,"score_gpt":0.22545989919058354,"score_spread":0.2162762472504861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013409259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996256,0.00059687794,0.0006743733,0.00015830374,0.00007796186,0.00001934436,0.000116997784,0.00006421867,0.002036102],"genre_scores_gemma":[0.9960758,0.00042458854,0.00052490446,0.00014571879,0.0000689985,0.000024288434,0.00023962844,0.00002489961,0.0024710707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998216,0.00003630013,0.000013233025,0.00002785235,0.000023424924,0.00007759744],"domain_scores_gemma":[0.9997353,0.000077747405,0.00004584823,0.00003802543,0.000011718852,0.0000913621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016625154,0.00030870896,0.0002696056,0.00014846568,0.0001765516,0.00039859457,0.0002286466,0.00025707015,0.004381979],"category_scores_gemma":[0.00033388872,0.00019218608,0.00013865926,0.0000881314,0.00027104063,0.00017535858,0.00022230102,0.0008643965,0.00076343084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015716767,0.00077489443,0.00068978145,0.00003841112,0.000019348377,0.000060246595,0.000021545064,0.000057870107,0.99231964,0.00016912616,0.00022675913,0.0040506115],"study_design_scores_gemma":[0.00033514967,0.0033418504,0.014369864,0.00000872281,0.0000396769,0.00040049668,0.00008685932,0.00064597174,0.9771327,0.00015421129,0.0034759273,0.000008567566],"about_ca_topic_score_codex":0.00028544117,"about_ca_topic_score_gemma":0.0005134996,"teacher_disagreement_score":0.004381979,"about_ca_system_score_codex":0.00022350458,"about_ca_system_score_gemma":0.00022235572,"threshold_uncertainty_score":0.014659226},"labels":[],"label_agreement":null},{"id":"W2013856377","doi":"10.1097/ccm.0b013e3181b42af0","title":"Association between tumor necrosis factor-α promoter −308 A/G polymorphism and susceptibility to sepsis and sepsis mortality: A systematic review and meta-analysis","year":2009,"lang":"en","type":"review","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Odds ratio; Medicine; Sepsis; Confidence interval; Meta-analysis; Internal medicine; Population; Subgroup analysis; Genotype; Gastroenterology; Immunology; Genetics; Biology; Gene","score_opus":0.0779999312489941,"score_gpt":0.3765759410972619,"score_spread":0.2985760098482678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013856377","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008720785,0.98894453,0.00052666315,0.00023623482,0.00017038154,0.00039624414,0.00069011596,0.000023001088,0.00029207795],"genre_scores_gemma":[0.17199652,0.8211872,0.0025297853,0.00072734687,0.0003020523,0.0019461073,0.00091908,0.000022054974,0.00036988832],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99093795,0.004475956,0.002536468,0.0009025327,0.00089076615,0.00025625553],"domain_scores_gemma":[0.9784328,0.015496002,0.0037585732,0.0004091508,0.0016644152,0.00023911904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.010606477,0.0020884403,0.017888956,0.0051585683,0.00055493833,0.0024069531,0.0021704733,0.0021259936,0.0032303375],"category_scores_gemma":[0.034368593,0.0014234424,0.022695817,0.008080717,0.0006149954,0.0012137388,0.0010181885,0.0012785571,0.0003147811],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020385669,0.000028395318,0.0071310746,0.513434,0.46487615,0.00026981984,0.00010632826,0.0005755901,0.0002801919,0.00010859925,0.0009261261,0.010225172],"study_design_scores_gemma":[0.000843328,0.00023566025,0.0054118005,0.03607324,0.9553554,0.00017913185,0.000046410587,0.0002066531,0.00014212613,0.00013869708,0.0013426697,0.000024887657],"about_ca_topic_score_codex":0.0065410524,"about_ca_topic_score_gemma":0.013616096,"teacher_disagreement_score":0.017888956,"about_ca_system_score_codex":0.0023707603,"about_ca_system_score_gemma":0.004059607,"threshold_uncertainty_score":0.056093097},"labels":[],"label_agreement":null},{"id":"W2014167332","doi":"10.1016/j.immuni.2010.12.015","title":"Signaling via the RIP2 Adaptor Protein in Central Nervous System-Infiltrating Dendritic Cells Promotes Inflammation and Autoimmunity","year":2011,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":150,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; American Lebanese Syrian Associated Charities; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Yale University","keywords":"Neuroinflammation; Signal transducing adaptor protein; Experimental autoimmune encephalomyelitis; NOD1; TLR2; Biology; Inflammasome; Inflammation; Autoimmunity; TLR4; Cell biology; NOD2; Immunology; Signal transduction; Immune system; Innate immune system","score_opus":0.01629709613009343,"score_gpt":0.20502411156984057,"score_spread":0.18872701543974715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014167332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98236614,0.0062608724,0.0032890174,0.0010578308,0.0002455656,0.00003612427,0.00063698064,0.00021811832,0.005889291],"genre_scores_gemma":[0.9927424,0.0016084465,0.0013518629,0.00024831187,0.00013431648,0.000038083672,0.0004459563,0.000040543415,0.0033901066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995763,0.00009311024,0.000032837204,0.000062479136,0.00006698355,0.00016825569],"domain_scores_gemma":[0.9997904,0.000017506072,0.00004895075,0.000028668463,0.000031952288,0.00008255796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040350386,0.0005847276,0.00043304553,0.00038135264,0.0003678425,0.00085525255,0.00023216207,0.00062437,0.0029296584],"category_scores_gemma":[0.00030435203,0.00022090209,0.00043243833,0.0001899013,0.00032535827,0.00063859316,0.00060759246,0.0016108956,0.0011427025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015049793,0.0000845581,0.0011465468,0.00014216878,0.00002241212,0.00037977027,0.000030478013,0.00015901557,0.9906628,0.0005297265,0.00081186736,0.004525582],"study_design_scores_gemma":[0.000452144,0.0011269195,0.063423574,0.000095184136,0.00018586044,0.003623562,0.0004605006,0.003758287,0.9096466,0.0020372975,0.01513859,0.00005144759],"about_ca_topic_score_codex":0.00016308669,"about_ca_topic_score_gemma":0.00033049568,"teacher_disagreement_score":0.0029296584,"about_ca_system_score_codex":0.0005539651,"about_ca_system_score_gemma":0.00033861864,"threshold_uncertainty_score":0.0098006725},"labels":[],"label_agreement":null},{"id":"W2014762407","doi":"10.1016/j.imlet.2004.07.019","title":"Polycationic lipids inhibit the pro-inflammatory response to LPS","year":2004,"lang":"en","type":"article","venue":"Immunology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Internalization; Lipopolysaccharide; Cell biology; CD14; Lipid A; Lipid raft; Chemistry; Inflammation; Signal transduction; Biology; Receptor; Biochemistry; Immunology","score_opus":0.006515523938025441,"score_gpt":0.2176365394193953,"score_spread":0.21112101548136986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014762407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885079,0.0028404386,0.0037991707,0.00049741066,0.00021863301,0.00007063488,0.00017194235,0.00017455264,0.0037194043],"genre_scores_gemma":[0.9876814,0.0020575004,0.0018271207,0.0001881446,0.00009404193,0.000041965683,0.0002968719,0.000045597564,0.0077674184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988735,0.000022740165,0.000009051574,0.000008471325,0.000029787343,0.000042530675],"domain_scores_gemma":[0.99974304,0.0000654358,0.000046058896,0.000039358034,0.000034132398,0.00007205693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014328638,0.00038556635,0.00026322927,0.00019153829,0.000175336,0.000337321,0.00017317601,0.000466285,0.0024611778],"category_scores_gemma":[0.0002763607,0.00015654111,0.00015172151,0.00008680596,0.00032278066,0.00031468656,0.00027329923,0.00090909837,0.00091062987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020697203,0.00018077581,0.000093286435,0.000065751796,0.0000046985197,0.000045715045,0.000018459647,0.00010889806,0.99086094,0.00017387063,0.0001592061,0.0062186276],"study_design_scores_gemma":[0.0002831513,0.0022780385,0.0018559964,0.000013804463,0.000012913913,0.00013250925,0.000026206439,0.0006782705,0.9900995,0.00015989767,0.0044518705,0.000007993953],"about_ca_topic_score_codex":0.0003869597,"about_ca_topic_score_gemma":0.00061242766,"teacher_disagreement_score":0.0024611778,"about_ca_system_score_codex":0.00015256002,"about_ca_system_score_gemma":0.00035030968,"threshold_uncertainty_score":0.008233428},"labels":[],"label_agreement":null},{"id":"W2014793846","doi":"10.1007/s10719-007-9088-2","title":"TLR-independent induction of human monocyte IL-1 by phosphoglycolipids from thermophilic bacteria","year":2007,"lang":"en","type":"article","venue":"Glycoconjugate Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Thermus thermophilus; Biology; Bacteria; Thermophile; Biochemistry; Microbiology; Enzyme; Escherichia coli","score_opus":0.01036719201681822,"score_gpt":0.24406470113642745,"score_spread":0.23369750911960924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014793846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99467635,0.0015270126,0.00091089174,0.00020975359,0.00007820105,0.00006263145,0.0009010152,0.000028950206,0.0016051538],"genre_scores_gemma":[0.99346715,0.00095435063,0.00109976,0.00016293734,0.00004630001,0.00007336063,0.001610291,0.000011692819,0.0025741565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997863,0.000051521052,0.000015350532,0.000016826705,0.000030344852,0.000099589306],"domain_scores_gemma":[0.9998629,0.000043318687,0.000021878062,0.00002341814,0.000019223708,0.000029159612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022153907,0.0006976088,0.00024040848,0.0002310317,0.00018700406,0.000303971,0.00016322157,0.00033612392,0.0023025463],"category_scores_gemma":[0.00024342518,0.00021678886,0.0004953355,0.00015090963,0.00020553771,0.00019234576,0.0004501555,0.00069357466,0.0007918065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012586389,0.00005242101,0.00020780758,0.00006115203,0.0000043666455,0.00015947966,0.000026832031,0.000054739223,0.9967771,0.000074998025,0.00009971591,0.0012227211],"study_design_scores_gemma":[0.00012440211,0.00048362356,0.015717175,0.000021101809,0.000018849432,0.00029022363,0.00007301696,0.0004786629,0.9811126,0.000089697096,0.0015830646,0.0000074965274],"about_ca_topic_score_codex":0.0007978913,"about_ca_topic_score_gemma":0.0014225655,"teacher_disagreement_score":0.0023025463,"about_ca_system_score_codex":0.00032746472,"about_ca_system_score_gemma":0.0002993842,"threshold_uncertainty_score":0.0077028275},"labels":[],"label_agreement":null},{"id":"W2014834877","doi":"10.1074/jbc.m302660200","title":"Oxidative Stress Reprograms Lipopolysaccharide Signaling via Src Kinase-dependent Pathway in RAW 264.7 Macrophage Cell Line","year":2003,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University Health Network; University of Toronto","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Proto-oncogene tyrosine-protein kinase Src; Cell biology; Oxidative stress; Lipopolysaccharide; Macrophage; Signal transduction; Cell culture; Kinase; Chemistry; Biology; Immunology; Biochemistry; Genetics","score_opus":0.014949908828964974,"score_gpt":0.23504185056462254,"score_spread":0.22009194173565758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014834877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9788401,0.006014752,0.006037657,0.0005326596,0.00026765623,0.00018737755,0.0034119773,0.00019388537,0.004513866],"genre_scores_gemma":[0.9707037,0.005367715,0.009998184,0.00044943602,0.00011477489,0.00051577354,0.0065092994,0.000052877698,0.0062881615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995896,0.000069674395,0.00005341128,0.000055211203,0.00012425946,0.000107864325],"domain_scores_gemma":[0.9998833,0.000017282948,0.00002512226,0.000018484163,0.000030803545,0.000025069676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037387793,0.0005297465,0.00059140474,0.00041468377,0.00027645586,0.00033140436,0.00034179568,0.00045312959,0.0016285921],"category_scores_gemma":[0.00011320371,0.00021515528,0.0006405147,0.00057141704,0.00023143076,0.00025036046,0.0002424877,0.001352228,0.0012366234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025259756,0.00016124871,0.00011500957,0.0001251236,0.000007740255,0.00013631322,0.000036363104,0.00006849071,0.9981816,0.00010658011,0.000135537,0.000673485],"study_design_scores_gemma":[0.00019620352,0.001796907,0.0075254506,0.0000343926,0.000048336722,0.00052650995,0.00009778739,0.0021053099,0.9823514,0.0001773586,0.005118851,0.000021471948],"about_ca_topic_score_codex":0.0006711195,"about_ca_topic_score_gemma":0.0009934121,"teacher_disagreement_score":0.0016285921,"about_ca_system_score_codex":0.0002728889,"about_ca_system_score_gemma":0.00032550626,"threshold_uncertainty_score":0.0054481626},"labels":[],"label_agreement":null},{"id":"W2014956761","doi":"10.1016/j.dci.2007.09.003","title":"Gene expression profiling of chicken lymphoid cells after treatment with Lactobacillus acidophilus cellular components","year":2007,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":115,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Guelph","funders":"Canadian Poultry Research Council","keywords":"Biology; Lactobacillus acidophilus; Immune system; STAT4; STAT2; Spleen; Splenocyte; Microbiology; Molecular biology; Immunology; Cell biology; Signal transduction; Bacteria; Genetics; stat","score_opus":0.019925385410459077,"score_gpt":0.2386406521105863,"score_spread":0.21871526670012723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2014956761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948907,0.0014523485,0.0007113292,0.00009580953,0.000035573852,0.000027284601,0.0010300658,0.000015224262,0.0017416094],"genre_scores_gemma":[0.9898413,0.00088259164,0.001260409,0.00013983645,0.00002217088,0.00009254339,0.0019540559,0.000016018748,0.005790974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998692,0.000014053527,0.000008912202,0.00003080593,0.000022060733,0.000054907716],"domain_scores_gemma":[0.9998901,0.000028347455,0.00001427489,0.000008004907,0.000027280596,0.000031969128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011230411,0.00024525067,0.00038751587,0.00035735624,0.00031060254,0.0004051636,0.00014131807,0.0003097644,0.0012207556],"category_scores_gemma":[0.00009753982,0.00017114068,0.0003302459,0.00036128613,0.00035445424,0.00017564005,0.00015370699,0.00048478576,0.00038713918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032749897,0.0000078260955,0.00025538282,0.00001729356,0.000002639659,0.000027870401,0.000019619061,0.000011440827,0.9990109,0.000017077893,0.0000137006355,0.00028876695],"study_design_scores_gemma":[0.000031365365,0.00044489728,0.040584102,0.000009120714,0.000046320358,0.0001284558,0.000317839,0.00034827078,0.9560567,0.000038465692,0.001986471,0.000008077169],"about_ca_topic_score_codex":0.0024324583,"about_ca_topic_score_gemma":0.0037855096,"teacher_disagreement_score":0.0024324583,"about_ca_system_score_codex":0.00037459985,"about_ca_system_score_gemma":0.00032483635,"threshold_uncertainty_score":0.004836619},"labels":[],"label_agreement":null},{"id":"W2015486163","doi":"10.1016/j.exger.2015.03.009","title":"Altered neutrophil functions in elderly patients during a 6-month follow-up period after a hip fracture","year":2015,"lang":"en","type":"article","venue":"Experimental Gerontology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health and Social Services Centre University Institute of Geriatrics of Sherbrooke; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Economic and Social Research Council; Canadian Institutes of Health Research; Université de Sherbrooke","keywords":"NADPH oxidase; Chemokine; TLR2; TLR4; Phagocytosis; Superoxide; Inflammation; Endocrinology; Internal medicine; Medicine; PI3K/AKT/mTOR pathway; Chemotaxis; Downregulation and upregulation; Immunology; Signal transduction; Receptor; Chemistry; Oxidative stress; Biochemistry","score_opus":0.01793251226062659,"score_gpt":0.2542071243924326,"score_spread":0.236274612131806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015486163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991522,0.00050678104,0.000022263646,0.000022759077,0.000007761085,0.000006507123,0.00009994836,0.000001525035,0.00018028783],"genre_scores_gemma":[0.99944705,0.00018894604,0.00002946059,0.000028003207,0.000014745159,0.0000071070885,0.00015813462,6.08646e-7,0.00012576656],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997297,0.000046191126,0.000039653183,0.000045907607,0.000048389426,0.000090170426],"domain_scores_gemma":[0.99943906,0.00007655542,0.00022202764,0.000023085448,0.00008909868,0.00015010253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031807992,0.000384802,0.00090654846,0.0010215086,0.00070647494,0.0006496295,0.00027465334,0.0007337246,0.00057588617],"category_scores_gemma":[0.0014847182,0.00021888768,0.0005910348,0.0008985642,0.00027213438,0.00043114173,0.00047125728,0.00058278895,0.00021036033],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000925617,0.00010385229,0.9948613,0.000018436422,0.000050426534,0.0015338453,0.00021679506,0.000028209672,0.0007127865,0.000005973705,0.000053649183,0.0014891215],"study_design_scores_gemma":[0.0000070688716,0.00045439898,0.99780923,0.0000059135,0.00005356056,0.0010953564,0.00032092174,0.000049923598,0.0000800203,0.000008810324,0.00010843951,0.0000063821203],"about_ca_topic_score_codex":0.0058850395,"about_ca_topic_score_gemma":0.006497605,"teacher_disagreement_score":0.0058850395,"about_ca_system_score_codex":0.00045857026,"about_ca_system_score_gemma":0.0003506767,"threshold_uncertainty_score":0.011701584},"labels":[],"label_agreement":null},{"id":"W2015934540","doi":"10.1038/nature09982","title":"Non-apoptotic role of BID in inflammation and innate immunity","year":2011,"lang":"en","type":"article","venue":"Nature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; McGill University","keywords":"NOD2; Innate immune system; NOD1; Nod; Inflammation; Cell biology; Pattern recognition receptor; Biology; Crosstalk; Signal transduction; Immunology; Immune system; Genetics; Gene","score_opus":0.005604335869931057,"score_gpt":0.2138417881023191,"score_spread":0.20823745223238804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2015934540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6694825,0.25127807,0.031629436,0.00912692,0.002313826,0.000117109965,0.0012751891,0.00031726877,0.034459688],"genre_scores_gemma":[0.96352595,0.021705046,0.0035759385,0.00041793621,0.00037945787,0.00005625526,0.00044478834,0.000036595597,0.009858001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959666,0.00010963792,0.000030935473,0.00005725962,0.00010622835,0.00009927752],"domain_scores_gemma":[0.99959177,0.000072677605,0.00008411194,0.00007124049,0.000076091055,0.00010408729],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081702915,0.00042050343,0.00046749777,0.00045395273,0.00059575617,0.0010887147,0.0005330101,0.000504503,0.0031294536],"category_scores_gemma":[0.00050555944,0.00020231049,0.00030604663,0.00020372047,0.0007685664,0.001621526,0.0010230542,0.0010640844,0.00078266574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047786497,0.00043171522,0.0036541908,0.001899482,0.00013638666,0.0017369163,0.00043951062,0.0009091642,0.7930459,0.07698722,0.008706366,0.107274525],"study_design_scores_gemma":[0.0006304918,0.0025110259,0.045717966,0.00037088143,0.00017890631,0.010288453,0.00104926,0.00677345,0.66434854,0.09580059,0.17218858,0.00014188359],"about_ca_topic_score_codex":0.00010862913,"about_ca_topic_score_gemma":0.00017633407,"teacher_disagreement_score":0.0031294536,"about_ca_system_score_codex":0.000646968,"about_ca_system_score_gemma":0.00040438568,"threshold_uncertainty_score":0.010469079},"labels":[],"label_agreement":null},{"id":"W2016422794","doi":"10.6000/1927-5951.2014.04.03.6","title":"Immunomodulatory Effects of Lycii Radicis Cortex Water Extract on Lipopolysaccharide-Activated RAW 264.7 Mouse Macrophages","year":2014,"lang":"en","type":"article","venue":"Journal of Pharmacy and Nutrition Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipopolysaccharide; Tumor necrosis factor alpha; Pharmacology; Cytokine; Chemistry; Macrophage; Nitric oxide; Chemokine; Immunology; Immune system; Biology; Medicine; Internal medicine; Biochemistry; In vitro","score_opus":0.011631665682129639,"score_gpt":0.2748665039352385,"score_spread":0.26323483825310884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016422794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928999,0.0046064216,0.0004885206,0.00016081685,0.000055470173,0.000040565974,0.00029545478,0.00007374573,0.001379193],"genre_scores_gemma":[0.99466246,0.0025567804,0.0007775255,0.00019250227,0.000050359893,0.000054592052,0.00039446555,0.000011849178,0.001299438],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999943,0.000013417559,0.0000056586305,0.0000072032067,0.0000111901645,0.000019522227],"domain_scores_gemma":[0.99992883,0.000011360219,0.000021123104,0.00000491932,0.000012603298,0.000021115893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014110291,0.0006872604,0.00044336764,0.00039108467,0.00011474447,0.0001508597,0.00015034404,0.00021230437,0.0010414668],"category_scores_gemma":[0.00011422157,0.00011114745,0.00032797147,0.00014557925,0.00018417998,0.0001887593,0.00015426906,0.0004575564,0.00021637192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008990639,0.00015048082,0.00017178123,0.00018886982,0.000010870334,0.000071341325,0.000026221114,0.000044876604,0.9954527,0.000024858322,0.000059562957,0.0028994735],"study_design_scores_gemma":[0.00028460333,0.0057325377,0.013822085,0.0000524767,0.00012604735,0.00018884127,0.00008731137,0.00054129475,0.9768438,0.000067475485,0.0022398569,0.000013784434],"about_ca_topic_score_codex":0.00038837217,"about_ca_topic_score_gemma":0.0004856331,"teacher_disagreement_score":0.0010414668,"about_ca_system_score_codex":0.000082025865,"about_ca_system_score_gemma":0.00023931966,"threshold_uncertainty_score":0.0034840703},"labels":[],"label_agreement":null},{"id":"W2016939538","doi":"10.1038/ncomms7062","title":"Glucocorticoids suppress inflammation via the upregulation of negative regulator IRAK-M","year":2015,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of General Medical Sciences; National Institutes of Health; National Institute on Deafness and Other Communication Disorders; Georgia Research Alliance; Howard Hughes Medical Institute","keywords":"Inflammation; Downregulation and upregulation; Haemophilus influenzae; Regulator; Glucocorticoid; Glucocorticoid receptor; Immunology; Biology; Receptor; Microbiology; Gene; Genetics; Antibiotics","score_opus":0.019198477908527363,"score_gpt":0.2778492270611879,"score_spread":0.25865074915266056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2016939538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9297435,0.044635586,0.011323703,0.0010458342,0.00076786755,0.000100966005,0.0007886834,0.000772727,0.010821138],"genre_scores_gemma":[0.9856676,0.0071330047,0.0038596713,0.00019611274,0.00016425872,0.000043650216,0.0002650391,0.000029608935,0.0026409505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998043,0.000058192556,0.000015457583,0.000028140857,0.00005108531,0.00004278734],"domain_scores_gemma":[0.9998599,0.00001907556,0.000054174496,0.000018154698,0.000014676193,0.000033882203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014890818,0.00038325414,0.00025869487,0.00021303922,0.00013193979,0.0002567199,0.0002191583,0.00020412994,0.0013946939],"category_scores_gemma":[0.00016846358,0.000076553384,0.00030912453,0.00009042083,0.00025963358,0.00017413756,0.00022530825,0.0007076815,0.00041400894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044830705,0.00004938576,0.00027478574,0.00014711615,0.000009348637,0.00006897398,0.000014363674,0.000051974996,0.9908887,0.00021069456,0.00025022915,0.007586206],"study_design_scores_gemma":[0.00011688552,0.0020627498,0.011290747,0.00003441718,0.000054307075,0.00061837095,0.00007530083,0.0004829188,0.9675617,0.0003416371,0.017348077,0.000012877354],"about_ca_topic_score_codex":0.000158699,"about_ca_topic_score_gemma":0.0004356557,"teacher_disagreement_score":0.0013946939,"about_ca_system_score_codex":0.00016243255,"about_ca_system_score_gemma":0.00021024281,"threshold_uncertainty_score":0.004665673},"labels":[],"label_agreement":null},{"id":"W2017213049","doi":"10.1128/iai.71.4.1643-1649.2003","title":"Effect of Interleukin-8 and Granulocyte Colony-Stimulating Factor on Priming and Activation of Bovine Neutrophils","year":2003,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Respiratory burst; Biology; Phagocytosis; Priming (agriculture); Granulocyte; Immunology; In vivo; Interleukin 8; In vitro; Microbiology; Flow cytometry; Cytokine; Biochemistry","score_opus":0.01098452810666915,"score_gpt":0.2585345660465204,"score_spread":0.24755003793985128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017213049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99421614,0.0043787407,0.00059206795,0.000066057546,0.00003776966,0.000025020665,0.00011223337,0.000017141369,0.00055485655],"genre_scores_gemma":[0.9965455,0.0011684771,0.0015331662,0.00007196435,0.000020552052,0.000029378762,0.00021268007,0.0000050690137,0.00041312192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974805,0.00010119783,0.000022827813,0.000033445547,0.000035166817,0.000059224287],"domain_scores_gemma":[0.9997948,0.00007477426,0.00005280056,0.000019134386,0.00002134074,0.000037180173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022639423,0.00035125224,0.00025886585,0.000115091745,0.000061063154,0.00018929297,0.00015598949,0.00022634825,0.0004888887],"category_scores_gemma":[0.00033525584,0.000081440536,0.00021159182,0.00006310096,0.00014571508,0.0001352364,0.00017635542,0.00031672092,0.00018418438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010437653,0.00008960087,0.0003749494,0.000103017905,0.000004717086,0.00007850459,0.000032804703,0.00006761964,0.99593437,0.000016701479,0.000032802105,0.0022211606],"study_design_scores_gemma":[0.00007518466,0.0038904983,0.00832522,0.000030445763,0.00003378873,0.00027523786,0.00004894576,0.00064762717,0.98407334,0.000027424914,0.002563918,0.000008366368],"about_ca_topic_score_codex":0.0005953636,"about_ca_topic_score_gemma":0.0008622216,"teacher_disagreement_score":0.0005953636,"about_ca_system_score_codex":0.00018334194,"about_ca_system_score_gemma":0.0001922726,"threshold_uncertainty_score":0.0016354322},"labels":[],"label_agreement":null},{"id":"W2017785511","doi":"10.1371/journal.pone.0021769","title":"Association Pattern of Interleukin-1 Receptor-Associated Kinase-4 Gene Polymorphisms with Allergic Rhinitis in a Han Chinese Population","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital; Montreal General Hospital; Université de Montréal; Hôtel-Dieu de Montréal; McGill University","funders":"National Science Fund for Distinguished Young Scholars; National Natural Science Foundation of China","keywords":"Genetics; Gene; Biology; Interleukin-4 receptor; Immunology; Medicine; Interleukin-21 receptor","score_opus":0.02081216716025435,"score_gpt":0.19581044952164542,"score_spread":0.17499828236139106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017785511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99955636,0.000117217125,0.00007006219,0.000023034692,0.000003911588,0.000004483508,0.000052814,0.000001996417,0.00017019943],"genre_scores_gemma":[0.99970657,0.00003693235,0.000052154835,0.0000097685215,0.000007271496,0.000004694956,0.000056090532,9.386133e-7,0.00012560598],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99965453,0.00006580723,0.000030455825,0.00013483093,0.000065198234,0.000049086902],"domain_scores_gemma":[0.9996215,0.00009717348,0.00009856133,0.0000441438,0.00005464648,0.000083890205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004917549,0.0003118395,0.00037885725,0.00052796304,0.0005327292,0.00025217782,0.00026502303,0.0002836653,0.0020443897],"category_scores_gemma":[0.0006717501,0.00016959225,0.0004433425,0.0006592089,0.00033855523,0.0001359378,0.00016577018,0.00023642305,0.0001424055],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033584682,0.000044313518,0.99124736,0.000019683011,0.00027171583,0.00062021584,0.00023188617,0.00010653085,0.0049621407,0.00006885072,0.00009835566,0.0019932177],"study_design_scores_gemma":[0.0000156839,0.00009063932,0.9988381,0.0000029743248,0.000091013855,0.00032661427,0.000092806375,0.0002536925,0.00015913475,0.00003660696,0.00008903959,0.0000037145144],"about_ca_topic_score_codex":0.010170834,"about_ca_topic_score_gemma":0.006715622,"teacher_disagreement_score":0.010170834,"about_ca_system_score_codex":0.00019566427,"about_ca_system_score_gemma":0.00041095726,"threshold_uncertainty_score":0.02022332},"labels":[],"label_agreement":null},{"id":"W2017797166","doi":"10.1016/j.smim.2009.08.001","title":"Innate immunity: The connection with inflammation and disease","year":2009,"lang":"en","type":"editorial","venue":"Seminars in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Innate immune system; Inflammation; Immunity; Connection (principal bundle); Disease; Immunology; Medicine; Immune system; Mathematics; Pathology","score_opus":0.003907535822311429,"score_gpt":0.22052968094389938,"score_spread":0.21662214512158795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017797166","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003268832,0.023579981,0.00013309611,0.021953769,0.95369494,0.000007346463,0.000014885765,0.000023672872,0.00055963406],"genre_scores_gemma":[0.00045839176,0.012875179,0.00009620751,0.010064227,0.973066,0.000009323181,0.000008617066,0.000012637853,0.0034094588],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99711454,0.00074656104,0.00038580736,0.00036352567,0.0012025012,0.00018702957],"domain_scores_gemma":[0.9901968,0.0045298897,0.00061012997,0.00027753622,0.0028890055,0.0014965418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0065481276,0.0043442855,0.0045867846,0.0026309432,0.0018287296,0.0050485847,0.0037380883,0.012539859,0.006578881],"category_scores_gemma":[0.013118765,0.0010626216,0.002072909,0.0010752252,0.0033119707,0.004074013,0.0020786794,0.021383367,0.0044546053],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010110595,0.000018006569,0.000041682906,0.0006135244,0.000042373573,0.00025099155,0.000022255894,0.000038477367,0.00015710095,0.0007834209,0.98627,0.011661011],"study_design_scores_gemma":[0.00009765874,0.00005138751,0.00039687892,0.0006615324,0.00010963494,0.0007150702,0.000059691843,0.00018813844,0.00019170354,0.0023140616,0.99518836,0.000025898866],"about_ca_topic_score_codex":0.0009229686,"about_ca_topic_score_gemma":0.0033203713,"teacher_disagreement_score":0.012539859,"about_ca_system_score_codex":0.0022447447,"about_ca_system_score_gemma":0.0018059622,"threshold_uncertainty_score":0.03463018},"labels":[],"label_agreement":null},{"id":"W2017874184","doi":"10.1111/j.1530-0277.2002.tb02663.x","title":"Glutathione Replacement Preserves the Functional Surfactant Phospholipid Pool Size and Decreases Sepsis‐Mediated Lung Dysfunction in Ethanol‐Fed Rats","year":2002,"lang":"en","type":"article","venue":"Alcoholism Clinical and Experimental Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"ARDS; Pulmonary surfactant; Lung; Phospholipid; Sepsis; Internal medicine; Glutathione; Respiratory distress; Endocrinology; Chemistry; Medicine; Biochemistry; Anesthesia","score_opus":0.09874751134721672,"score_gpt":0.3788714287981937,"score_spread":0.280123917450977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017874184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845123,0.00031853258,0.0006793638,0.00010392937,0.000020069672,0.00001475565,0.00014253853,0.000092476905,0.00017715419],"genre_scores_gemma":[0.9957937,0.00050746324,0.0015176258,0.00009365022,0.000012127037,0.000060657916,0.00038255172,0.000033276174,0.0015990335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998629,0.000025608484,0.000017079064,0.000025845664,0.000023625254,0.00004498983],"domain_scores_gemma":[0.99955577,0.00002723615,0.0001386001,0.00007496556,0.00005019576,0.00015330283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021603797,0.0009069982,0.000603274,0.0007642413,0.00027396448,0.0003147568,0.00039535615,0.0005551735,0.0012721773],"category_scores_gemma":[0.00025978265,0.00034414677,0.00031018615,0.00021673183,0.0007547476,0.0005031876,0.00033510724,0.0010151602,0.00035445628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00813931,0.0008665667,0.0014412845,0.00007846759,0.000051858762,0.00012264408,0.00006993803,0.00017818743,0.9832857,0.00011626845,0.00011583615,0.005533994],"study_design_scores_gemma":[0.000475373,0.012769801,0.014496054,0.000029141127,0.00014147388,0.00033120174,0.00020705965,0.001404729,0.9682358,0.00017591336,0.0017023762,0.000030964264],"about_ca_topic_score_codex":0.0013649833,"about_ca_topic_score_gemma":0.0017179782,"teacher_disagreement_score":0.0013649833,"about_ca_system_score_codex":0.00046740624,"about_ca_system_score_gemma":0.0005292789,"threshold_uncertainty_score":0.0042558312},"labels":[],"label_agreement":null},{"id":"W2017973506","doi":"10.1159/000095162","title":"Lipopolysaccharide and TNF-α Produce Very Similar Changes in Gene Expression in Human Endothelial Cells","year":2006,"lang":"en","type":"article","venue":"Journal of Vascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre","funders":"","keywords":"Tumor necrosis factor alpha; CD14; Biology; Autocrine signalling; Lipopolysaccharide; Molecular biology; Gene expression; TLR4; Microarray analysis techniques; Cell adhesion molecule; Chemokine; Signal transduction; Cell biology; Immunology; Receptor; Gene; Inflammation; Flow cytometry; Biochemistry","score_opus":0.025218180089188948,"score_gpt":0.3011087763533624,"score_spread":0.27589059626417345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2017973506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98720527,0.004847033,0.003546417,0.00012599264,0.00015789189,0.00007241727,0.0014575031,0.00007192933,0.0025154483],"genre_scores_gemma":[0.9874988,0.002467071,0.0035348898,0.0002087771,0.000053316635,0.00013885011,0.002459537,0.000015262176,0.0036235524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997172,0.00006939884,0.000030842755,0.00005617946,0.00006744133,0.000058920672],"domain_scores_gemma":[0.99975485,0.000057941263,0.000043267937,0.000043825334,0.000060212325,0.000039996532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016699113,0.0002121441,0.00022123934,0.0003254132,0.00014537034,0.00038872127,0.00007422197,0.00024520647,0.001376332],"category_scores_gemma":[0.0002753017,0.00014947736,0.000352135,0.00033820877,0.00013592327,0.00010506076,0.000115230214,0.0003491146,0.000579833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018884277,0.000037440343,0.00067862397,0.000033264834,0.000011032484,0.00008261873,0.000031335785,0.00003795867,0.9972988,0.000037112757,0.00004036462,0.0015227001],"study_design_scores_gemma":[0.00005074867,0.0011425945,0.05401541,0.000018829494,0.00005542399,0.00085724506,0.0001823496,0.0007029714,0.938395,0.00016680075,0.004393842,0.000018664587],"about_ca_topic_score_codex":0.0005447294,"about_ca_topic_score_gemma":0.00041995005,"teacher_disagreement_score":0.001376332,"about_ca_system_score_codex":0.00023598029,"about_ca_system_score_gemma":0.00013427487,"threshold_uncertainty_score":0.00460428},"labels":[],"label_agreement":null},{"id":"W2018079325","doi":"10.1097/00003246-200007000-00065","title":"Increased gut permeability and bacterial translocation in Pseudomonas pneumonia-induced sepsis","year":2000,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"","keywords":"Pneumonia; Medicine; Sepsis; Gastroenterology; Internal medicine; Intestinal permeability; Pathogenesis; Vascular permeability; Pseudomonas aeruginosa; Bacterial pneumonia; Mesenteric lymph nodes; Pathology; Anesthesia; Spleen; Biology; Bacteria","score_opus":0.01391257135138823,"score_gpt":0.2797598336610277,"score_spread":0.26584726230963945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018079325","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818206,0.0011386877,0.00041505482,0.000034532513,0.000010679499,0.00002448346,0.000023798537,0.000014486104,0.00015624297],"genre_scores_gemma":[0.99757594,0.001006829,0.00092110824,0.00006419536,0.000032640302,0.00005737245,0.000086698165,0.0000033356703,0.00025184965],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99968183,0.00013124087,0.000022182448,0.00003268046,0.00007468129,0.00005740634],"domain_scores_gemma":[0.9995591,0.00006449275,0.00021245975,0.000020821502,0.000036827834,0.00010633899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005777067,0.0005672173,0.00047953535,0.00039654286,0.00017849497,0.00024550426,0.00017171426,0.00051855156,0.0012510992],"category_scores_gemma":[0.0005336336,0.00022219445,0.00021178882,0.00019584269,0.0004975482,0.00034766702,0.00027668366,0.00065123034,0.00017782209],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012574087,0.0012749179,0.015403919,0.00043833995,0.000057865538,0.0018916054,0.00007046693,0.00027529467,0.9564795,0.00008946002,0.00014844803,0.011296197],"study_design_scores_gemma":[0.0014709355,0.10573786,0.5477041,0.00018357662,0.00031464698,0.016910028,0.0003817096,0.003958048,0.3213909,0.00036848057,0.0015234,0.00005641713],"about_ca_topic_score_codex":0.00013354653,"about_ca_topic_score_gemma":0.00022037678,"teacher_disagreement_score":0.0012510992,"about_ca_system_score_codex":0.00021341292,"about_ca_system_score_gemma":0.00025113125,"threshold_uncertainty_score":0.0041853786},"labels":[],"label_agreement":null},{"id":"W2018174911","doi":"10.1371/journal.pone.0056014","title":"T Cell Intrinsic NOD2 Is Dispensable for CD8 T Cell Immunity","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Sanofi Pasteur; University of Toronto; Sanofi","keywords":"NOD2; Muramyl dipeptide; Biology; T cell; Cytotoxic T cell; Adoptive cell transfer; Innate immune system; Antigen-presenting cell; CD8; Cell biology; Acquired immune system; Immune system; Immunology; In vitro","score_opus":0.024048953739176867,"score_gpt":0.20092970010852257,"score_spread":0.1768807463693457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018174911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935998,0.0014200578,0.0019479754,0.000103602564,0.000035937504,0.00001947485,0.00048218877,0.0001308236,0.0022602407],"genre_scores_gemma":[0.9952442,0.00035237955,0.0010546831,0.000058123307,0.000013972762,0.000034785546,0.0007097947,0.000041341096,0.0024907112],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996661,0.000054774246,0.000041917163,0.0000752441,0.000074254225,0.000087737426],"domain_scores_gemma":[0.9995944,0.000067513356,0.00009600195,0.00006009574,0.00003390811,0.00014805752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015138857,0.00042275002,0.0003304021,0.00023015426,0.00013570234,0.00044543768,0.00031872283,0.000459772,0.0022499303],"category_scores_gemma":[0.00022495858,0.00024212869,0.00025864653,0.00012485166,0.0002910763,0.0002843883,0.00041985518,0.00081349374,0.00094440987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007440607,0.00001951952,0.000291151,0.000027894399,0.0000035616574,0.00012808524,0.000007798146,0.00003520608,0.9988656,0.000053361702,0.000026941487,0.0004664673],"study_design_scores_gemma":[0.00007780622,0.0004917901,0.0145473275,0.00002791352,0.000039134913,0.0025656875,0.00012659801,0.002861486,0.9736684,0.00013527805,0.0054425453,0.000016053647],"about_ca_topic_score_codex":0.0003137893,"about_ca_topic_score_gemma":0.00056003965,"teacher_disagreement_score":0.0022499303,"about_ca_system_score_codex":0.00027482206,"about_ca_system_score_gemma":0.00024754682,"threshold_uncertainty_score":0.0075267553},"labels":[],"label_agreement":null},{"id":"W2018560551","doi":"10.1097/ccm.0000000000001005","title":"Toll-Like Receptor 9 Signaling Regulates Tissue Factor and Tissue Factor Pathway Inhibitor Expression in Human Endothelial Cells and Coagulation in Mice","year":2015,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research; Genentech","keywords":"Tissue factor; Tissue factor pathway inhibitor; TLR9; Thromboplastin; Molecular biology; CpG site; Biology; Medicine; Coagulation; Gene expression; Internal medicine; DNA methylation; Gene; Biochemistry","score_opus":0.022476670207426087,"score_gpt":0.2912491406158209,"score_spread":0.2687724704083948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018560551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98441976,0.0028813973,0.008749211,0.00034928875,0.00009037402,0.00012650123,0.0011043185,0.00027768008,0.002001395],"genre_scores_gemma":[0.98466927,0.0017791326,0.0065516457,0.00022207388,0.000023452489,0.00024349653,0.0008962535,0.00005759727,0.005557118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995509,0.00009342764,0.000043413675,0.0001260544,0.00008300312,0.000103239865],"domain_scores_gemma":[0.9997241,0.000022509872,0.00013040498,0.00003730412,0.000018361197,0.00006737905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004377799,0.00052628893,0.00029126563,0.0005414421,0.00017842963,0.0003818064,0.00032382988,0.00055518193,0.003175818],"category_scores_gemma":[0.00021369655,0.00035864566,0.00054292136,0.00021260823,0.00036154682,0.00026231384,0.0002125235,0.0010843874,0.00086568075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046031154,0.00011820853,0.0002579758,0.000041837142,0.000008900135,0.00005892779,0.000012264325,0.000053033473,0.9974827,0.0001343581,0.00007394268,0.0012974584],"study_design_scores_gemma":[0.00027883422,0.0015315063,0.009006619,0.00002809342,0.000069211936,0.0007659161,0.000052140385,0.0014487412,0.98222846,0.00015477029,0.004422475,0.000013282091],"about_ca_topic_score_codex":0.00032459488,"about_ca_topic_score_gemma":0.00036569982,"teacher_disagreement_score":0.003175818,"about_ca_system_score_codex":0.00046534455,"about_ca_system_score_gemma":0.00032357345,"threshold_uncertainty_score":0.01062417},"labels":[],"label_agreement":null},{"id":"W2018677997","doi":"10.1152/ajpgi.00562.2004","title":"Toll-like receptor-4 regulation of hepatic<i>Cyp3a11</i>metabolism in a mouse model of LPS-induced CNS inflammation","year":2005,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Inflammation; Endocrinology; Internal medicine; TLR4; Receptor; Biology; Cytochrome P450; Intraperitoneal injection; Metabolism; Medicine","score_opus":0.008543991247993672,"score_gpt":0.21307035612205688,"score_spread":0.2045263648740632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018677997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920208,0.001242504,0.003817802,0.0002510419,0.000056386816,0.00006632381,0.00088266557,0.0002831086,0.0013793058],"genre_scores_gemma":[0.98729753,0.001025858,0.0050272946,0.00013747955,0.000024620014,0.00017351007,0.001007073,0.00009965831,0.0052071167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969935,0.00006839158,0.000031870983,0.00005515621,0.00006053665,0.00008479863],"domain_scores_gemma":[0.9996942,0.000021888936,0.00013360567,0.000031980428,0.000033059754,0.00008527195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026083345,0.00068324216,0.00044527507,0.00059667387,0.00021655831,0.00042564268,0.00031442926,0.0005487459,0.0014938007],"category_scores_gemma":[0.00012161979,0.00033750274,0.000526456,0.00025752228,0.0006355764,0.00035453992,0.00017953875,0.0012528689,0.00062958937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010257222,0.00011610266,0.0003342314,0.000033944023,0.000008801181,0.00009579908,0.000016754575,0.000089822046,0.99723476,0.0001160213,0.000075339995,0.0008528002],"study_design_scores_gemma":[0.00010304972,0.001213286,0.0056927428,0.000009464687,0.000027792807,0.00036057882,0.00003834855,0.0009117157,0.9901316,0.00009429564,0.001407131,0.000010036784],"about_ca_topic_score_codex":0.0008126577,"about_ca_topic_score_gemma":0.0011057615,"teacher_disagreement_score":0.0014938007,"about_ca_system_score_codex":0.00058285554,"about_ca_system_score_gemma":0.0003166201,"threshold_uncertainty_score":0.004997313},"labels":[],"label_agreement":null},{"id":"W2018706148","doi":"10.1371/journal.pone.0015041","title":"Ontogeny of Toll-Like Receptor Mediated Cytokine Responses of Human Blood Mononuclear Cells","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Burroughs Wellcome Fund; Michael Smith Health Research BC; Canadian Child Health Clinician Scientist Program; Hospital for Sick Children; University of British Columbia; Children's Health Research Institute","keywords":"Immune system; Immunology; Innate immune system; Acquired immune system; Biology; Ontogeny; Immunity; Cytokine; Offspring; Peripheral blood mononuclear cell; Young adult; Physiology; Medicine; Internal medicine; Pregnancy; Endocrinology","score_opus":0.02035938565236872,"score_gpt":0.21794428212691916,"score_spread":0.19758489647455044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018706148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9830936,0.005683526,0.0019766174,0.00014874196,0.000062008956,0.00007538192,0.00232501,0.000050817383,0.006584334],"genre_scores_gemma":[0.9876638,0.0034010601,0.0014257412,0.000169344,0.000039324364,0.00016643546,0.0012737693,0.000025966472,0.005834545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998363,0.000032495172,0.0000121911535,0.000051334162,0.000038827297,0.000028821103],"domain_scores_gemma":[0.9998153,0.000028354418,0.000048087444,0.000019798614,0.000043926902,0.000044557586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026292953,0.00019282704,0.0001948057,0.00059872924,0.00020215064,0.00058555196,0.00017512213,0.00031355306,0.0025966885],"category_scores_gemma":[0.00047281478,0.00021075683,0.00015645575,0.00021706539,0.00016461969,0.00027225324,0.00035398794,0.00047201454,0.0009236535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009452946,0.00011268271,0.09262237,0.00026558776,0.000038077833,0.0005570716,0.00086066406,0.00021752581,0.8633557,0.0010645041,0.0007344536,0.039226037],"study_design_scores_gemma":[0.000015151996,0.0005968431,0.9255887,0.0000858225,0.0000367909,0.0007630075,0.00062632014,0.00037522463,0.060106363,0.0004502674,0.01133519,0.000020212867],"about_ca_topic_score_codex":0.0008820195,"about_ca_topic_score_gemma":0.0007576564,"teacher_disagreement_score":0.0025966885,"about_ca_system_score_codex":0.00018123897,"about_ca_system_score_gemma":0.00025627727,"threshold_uncertainty_score":0.008686721},"labels":[],"label_agreement":null},{"id":"W2018762139","doi":"10.1016/s0952-7915(02)00406-5","title":"Making and breaking tolerance","year":2002,"lang":"en","type":"review","venue":"Current Opinion in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":105,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"","keywords":"Autoimmunity; Self Tolerance; Immunology; Biology; Immune system; Antigen; Innate immune system; Cell biology; Antigen presentation; Receptor; Immune tolerance; Central tolerance; Peripheral tolerance; T cell; Genetics","score_opus":0.12456492769589274,"score_gpt":0.38380897804804265,"score_spread":0.2592440503521499,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018762139","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024451164,0.96972185,0.0016102665,0.008621047,0.0140116885,0.000010506205,0.000013956688,0.000035691486,0.005730499],"genre_scores_gemma":[0.003953077,0.95989555,0.0016976835,0.009886134,0.010187461,0.000037221685,0.000037446567,0.000016188475,0.01428927],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99952745,0.00012604025,0.00004005018,0.00007744163,0.00017773356,0.000051259904],"domain_scores_gemma":[0.99957484,0.00018548669,0.000037134963,0.000038823284,0.000080542675,0.00008308843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015732568,0.0010465906,0.0015433076,0.0011336618,0.0007838069,0.0027458745,0.0013342942,0.0029287864,0.004656971],"category_scores_gemma":[0.0015486784,0.00031782134,0.00039001153,0.00091309514,0.0037673262,0.0057343123,0.0017835813,0.0056066248,0.0026449175],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011057354,0.000074023905,0.00019923656,0.0042589614,0.000050786548,0.00029399572,0.00036206606,0.00023363839,0.0025986594,0.058928743,0.17526644,0.75762296],"study_design_scores_gemma":[0.00001365284,0.000023084065,0.000120063385,0.00054335507,0.000013152566,0.000432018,0.00010195819,0.00004430609,0.00026615793,0.015236895,0.9831959,0.000009359534],"about_ca_topic_score_codex":0.00046065354,"about_ca_topic_score_gemma":0.0011537606,"teacher_disagreement_score":0.004656971,"about_ca_system_score_codex":0.0007733414,"about_ca_system_score_gemma":0.0011458397,"threshold_uncertainty_score":0.015579104},"labels":[],"label_agreement":null},{"id":"W2018994645","doi":"10.1046/j.1365-2249.2003.02191.x","title":"Modulation of cytokine release from colonic explants by bacterial antigens in inflammatory bowel disease","year":2003,"lang":"en","type":"article","venue":"Clinical & Experimental Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Crohn's and Colitis Foundation of Canada; Medical Research Council Canada; Hospital Research Foundation","keywords":"Superantigen; Tumor necrosis factor alpha; Cytokine; Lipopolysaccharide; Proinflammatory cytokine; Immunology; Inflammatory bowel disease; Interleukin; Interleukin 1 receptor antagonist; Biology; Inflammation; Medicine; Receptor antagonist; Internal medicine; Receptor; T cell; Antagonist; Immune system","score_opus":0.018037176265499753,"score_gpt":0.2998681074264121,"score_spread":0.28183093116091235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2018994645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99015254,0.00833046,0.00074089604,0.000037315058,0.000049653696,0.000029169867,0.000122010184,0.00002187301,0.000515923],"genre_scores_gemma":[0.99100226,0.0051191146,0.0023120542,0.000045362685,0.000051882445,0.00005897408,0.00039104762,0.00001259209,0.0010067597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975103,0.000088993824,0.000024705294,0.000032635846,0.000059031277,0.000043614855],"domain_scores_gemma":[0.9998105,0.000051064533,0.00003334041,0.00002225863,0.000020208889,0.00006254368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003069092,0.0005789958,0.00050863676,0.00028950098,0.00015288287,0.000362161,0.0001251036,0.00032892215,0.0009080293],"category_scores_gemma":[0.00028276426,0.00023422156,0.00026284458,0.00027993272,0.0002992107,0.00022887648,0.00021571707,0.00065043825,0.0004387623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090814277,0.000038725142,0.00059061154,0.000111868605,0.000005148532,0.00017145049,0.000035431454,0.000032294876,0.9969463,0.0000058709775,0.000010286254,0.0011440152],"study_design_scores_gemma":[0.00012575786,0.008275075,0.04763738,0.000045904228,0.00009211308,0.0017627736,0.0002758954,0.0006486601,0.9386065,0.00006215771,0.002450947,0.000016823406],"about_ca_topic_score_codex":0.00017218449,"about_ca_topic_score_gemma":0.0004420269,"teacher_disagreement_score":0.0009080293,"about_ca_system_score_codex":0.00016359381,"about_ca_system_score_gemma":0.00013259436,"threshold_uncertainty_score":0.0030376315},"labels":[],"label_agreement":null},{"id":"W2019339732","doi":"10.1038/nm.3681","title":"Regulation of astrocyte activation by glycolipids drives chronic CNS inflammation","year":2014,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":478,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Montreal Neurological Institute and Hospital","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Aging","keywords":"Lactosylceramide; Astrocyte; Microglia; Neurodegeneration; Experimental autoimmune encephalomyelitis; Biology; Chemokine; Neuroinflammation; Inflammation; Immunology; Autocrine signalling; Cell biology; Neuroscience; Central nervous system; Medicine; Glycolipid; Receptor; Disease; Biochemistry; Pathology","score_opus":0.002942615874240947,"score_gpt":0.22556151842934835,"score_spread":0.2226189025551074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019339732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955264,0.001112152,0.0011874896,0.00024846144,0.000057956106,0.000015980042,0.00020639884,0.000027868067,0.0016173817],"genre_scores_gemma":[0.9969326,0.0007841077,0.0006698238,0.000065829765,0.000021660047,0.000018125109,0.00010217854,0.000012339475,0.0013933253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979216,0.000026143289,0.00001174811,0.000034765337,0.000040117717,0.00009498521],"domain_scores_gemma":[0.9998901,0.000009203335,0.000034027686,0.000011824598,0.000018635268,0.000036296453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012144365,0.0002615484,0.00021413935,0.00019164296,0.00025436343,0.00065431575,0.0001657972,0.00026772573,0.0012171175],"category_scores_gemma":[0.00011463707,0.00012769377,0.00020968786,0.00017377034,0.0003904531,0.00032008367,0.00040188903,0.00068156596,0.00034954055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039767608,0.000025335234,0.00080035353,0.000042477724,0.000006750945,0.00008948221,0.000034223955,0.000041672978,0.9966473,0.00029427485,0.00007174186,0.0015487355],"study_design_scores_gemma":[0.000043028635,0.0005273641,0.037850168,0.000038061462,0.00004984849,0.00034134643,0.00043871065,0.0012439693,0.95477605,0.0006994812,0.003979022,0.000012943736],"about_ca_topic_score_codex":0.0006628939,"about_ca_topic_score_gemma":0.0025132834,"teacher_disagreement_score":0.0012171175,"about_ca_system_score_codex":0.0005129067,"about_ca_system_score_gemma":0.0003455891,"threshold_uncertainty_score":0.0040717125},"labels":[],"label_agreement":null},{"id":"W2019576909","doi":"10.1016/j.immuni.2012.10.014","title":"Innate Immune Function by Toll-like Receptors: Distinct Responses in Newborns and the Elderly","year":2012,"lang":"en","type":"review","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":559,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Innate immune system; Immune system; Biology; Toll-like receptor; Immunology; Innate lymphoid cell; Inflammation; Pattern recognition receptor; Disease; Neuroscience; Medicine; Internal medicine","score_opus":0.025378649510083295,"score_gpt":0.27800294384917357,"score_spread":0.2526242943390903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019576909","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013124822,0.99920326,0.00008143134,0.00020568942,0.00013545931,0.0000013590067,0.000011381678,0.0000032504204,0.00022698453],"genre_scores_gemma":[0.00082077546,0.9982077,0.00012815796,0.00020120568,0.00039032867,0.0000040996974,0.00002268941,8.7082384e-7,0.00022430728],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975866,0.000037733636,0.000046664107,0.00005074682,0.00007887627,0.000027223994],"domain_scores_gemma":[0.9995938,0.00019198559,0.000075429685,0.000008211959,0.00008348301,0.000047031488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005558406,0.0010487544,0.0018935401,0.0010940671,0.00016502547,0.00087516,0.00078391744,0.0013232549,0.0012599305],"category_scores_gemma":[0.0007829604,0.00018004773,0.0003869669,0.0012775292,0.00055484095,0.0010092446,0.0006014575,0.0015426427,0.0010374463],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015319984,0.00004857214,0.00065492676,0.0072214263,0.00006263639,0.0003196804,0.000044231467,0.00011946028,0.0017085227,0.001078548,0.020311328,0.96827745],"study_design_scores_gemma":[0.0000754794,0.00026417134,0.010127843,0.006618874,0.00037621014,0.008185083,0.00029475868,0.00014321673,0.001315287,0.003020818,0.9695041,0.0000741662],"about_ca_topic_score_codex":0.00074016274,"about_ca_topic_score_gemma":0.0011166597,"teacher_disagreement_score":0.0018935401,"about_ca_system_score_codex":0.0004088797,"about_ca_system_score_gemma":0.00073724485,"threshold_uncertainty_score":0.004214883},"labels":[],"label_agreement":null},{"id":"W2019633544","doi":"10.1093/humrep/del377","title":"Toll-like receptor 4 polymorphisms and idiopathic chromosomally normal miscarriage","year":2006,"lang":"en","type":"article","venue":"Human Reproduction","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Child and Family Research Institute; BC Children's Hospital","funders":"","keywords":"TLR4; Single-nucleotide polymorphism; Genotype; Biology; Fetus; Andrology; Recurrent miscarriage; Oxytocin receptor; Miscarriage; Receptor; Pregnancy; Immunology; Umbilical cord; Internal medicine; Endocrinology; Genetics; Gene; Medicine","score_opus":0.0076968840108740675,"score_gpt":0.2075413802616173,"score_spread":0.19984449625074324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019633544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99915564,0.00037316224,0.00014487801,0.00003871666,0.0000036755032,0.0000040613445,0.00009543987,0.000005360504,0.00017900081],"genre_scores_gemma":[0.9995358,0.000112412214,0.00017832707,0.000007951862,0.0000083146015,0.0000039162514,0.000070834976,0.0000014936346,0.00008089254],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996424,0.000114484676,0.00003914722,0.00008133562,0.00007450349,0.000048148228],"domain_scores_gemma":[0.9973431,0.0010042582,0.0011153835,0.00018192685,0.000113764654,0.00024158118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052613067,0.00037209474,0.0003594149,0.0009037757,0.00042362968,0.00028376296,0.00042004514,0.0005298874,0.0049142516],"category_scores_gemma":[0.005180681,0.00018918434,0.00020147908,0.0005185503,0.00048047834,0.0001670674,0.00031049442,0.00044566617,0.0002178803],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011976172,0.00007780026,0.9895181,0.000040575822,0.00011068988,0.0014981269,0.00016061675,0.00012469874,0.0035973084,0.0001045168,0.000119520846,0.0034503923],"study_design_scores_gemma":[0.0000797676,0.0006453586,0.969673,0.000029081833,0.00019568473,0.025473906,0.00014352951,0.0006269147,0.0022944263,0.00027955844,0.00054678234,0.0000119681],"about_ca_topic_score_codex":0.00088714453,"about_ca_topic_score_gemma":0.0005963643,"teacher_disagreement_score":0.0049142516,"about_ca_system_score_codex":0.00017034913,"about_ca_system_score_gemma":0.00015757848,"threshold_uncertainty_score":0.016439795},"labels":[],"label_agreement":null},{"id":"W2019929978","doi":"10.1016/j.ijpharm.2015.03.028","title":"Design and preclinical characterization of a novel vaccine adjuvant formulation consisting of a synthetic TLR4 agonist in a thermoreversible squalene emulsion","year":2015,"lang":"en","type":"article","venue":"International Journal of Pharmaceutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Adjuvant; Squalene; Agonist; Chemistry; Pharmacology; Receptor; Medicine; Immunology; Biochemistry","score_opus":0.09099088089401106,"score_gpt":0.36577403135264563,"score_spread":0.27478315045863455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019929978","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97943753,0.0013998733,0.016953312,0.0001813541,0.00009468078,0.00040471245,0.0003039613,0.00008344799,0.0011410726],"genre_scores_gemma":[0.98166794,0.0011899093,0.012916104,0.00010259787,0.000028985462,0.00021496096,0.00041912158,0.000023765786,0.0034365181],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999105,0.000011697981,0.00000811686,0.000017382978,0.00002680229,0.000025553029],"domain_scores_gemma":[0.9999125,0.000013576887,0.000029043214,0.0000067957335,0.000021387712,0.000016671149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036372078,0.00035874036,0.00019259461,0.00020546874,0.00010780072,0.00020103656,0.00022916342,0.00028143724,0.0011609923],"category_scores_gemma":[0.00021045882,0.0001774258,0.00027548207,0.00007809568,0.00015828718,0.00028113284,0.00016533607,0.0005283751,0.000348432],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022642774,0.00018819397,0.000074213305,0.00004783034,0.00000575907,0.00001998617,0.0000075083494,0.00036869207,0.9962714,0.00010751558,0.00003926208,0.0026431584],"study_design_scores_gemma":[0.000089773974,0.003601486,0.00032668907,0.0000056728236,0.00003434406,0.000069660135,0.000007969488,0.0013044459,0.99186885,0.000040456736,0.0026460919,0.0000046019336],"about_ca_topic_score_codex":0.00026549163,"about_ca_topic_score_gemma":0.0003798626,"teacher_disagreement_score":0.0011609923,"about_ca_system_score_codex":0.0002130301,"about_ca_system_score_gemma":0.00038478166,"threshold_uncertainty_score":0.0038838387},"labels":[],"label_agreement":null},{"id":"W2019982696","doi":"10.1016/j.surg.2013.03.006","title":"Lipopolysaccharide-induced toll-like receptor 4 signaling enhances the migratory ability of human esophageal cancer cells in a selectin-dependent manner","year":2013,"lang":"en","type":"article","venue":"Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"TLR4; Medicine; Cancer research; Toll-like receptor; Cell adhesion molecule; Fibronectin; Cell biology; Immunology; Receptor; Biology; Internal medicine; Innate immune system; Extracellular matrix","score_opus":0.015358032985876104,"score_gpt":0.24808084891382906,"score_spread":0.23272281592795296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019982696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982408,0.00052262587,0.00023988102,0.000055669716,0.000019395124,0.000010212161,0.00010761014,0.000012135606,0.00079166895],"genre_scores_gemma":[0.9967663,0.00051852164,0.0002746208,0.00004563641,0.0000112753105,0.000018055323,0.00032610845,0.0000033206784,0.0020360553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999057,0.000017838225,0.000006517324,0.000009400497,0.000015116585,0.000045311906],"domain_scores_gemma":[0.99995756,0.0000074027407,0.000006893247,0.0000057876377,0.0000074592076,0.000014805263],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000958393,0.00020430752,0.00017445865,0.00019974836,0.00017564005,0.00023887672,0.000064860644,0.00015903605,0.0023801075],"category_scores_gemma":[0.000075430544,0.000097388605,0.000247894,0.00015922861,0.000106433436,0.00014304515,0.00012705891,0.00036485327,0.00049180206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053291244,0.00012776618,0.0011439404,0.00004712247,0.0000086595355,0.00012413022,0.00004709745,0.00004440988,0.99481165,0.00009389135,0.00019877935,0.002819627],"study_design_scores_gemma":[0.00010865827,0.0017997895,0.0635465,0.000017900828,0.00005592033,0.00059868157,0.0003419906,0.0015576408,0.92636937,0.00008264338,0.0055088215,0.000012042691],"about_ca_topic_score_codex":0.0005132706,"about_ca_topic_score_gemma":0.00095193874,"teacher_disagreement_score":0.0023801075,"about_ca_system_score_codex":0.0001215777,"about_ca_system_score_gemma":0.00022090418,"threshold_uncertainty_score":0.007962227},"labels":[],"label_agreement":null},{"id":"W2021443659","doi":"10.1016/j.mvr.2013.09.001","title":"Desmopressin improves intestinal functional capillary density and decreases leukocyte activation in experimental endotoxemia","year":2013,"lang":"en","type":"article","venue":"Microvascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Microcirculation; Intravital microscopy; Lipopolysaccharide; Internal medicine; Sepsis; Desmopressin; Endocrinology; Medicine; Arteriole; Inflammation; Vasopressin","score_opus":0.033021691516180396,"score_gpt":0.2863005422367953,"score_spread":0.2532788507206149,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021443659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99803025,0.00062930776,0.0005778323,0.00016476968,0.00008090514,0.000020633614,0.00011893522,0.00005635042,0.0003211346],"genre_scores_gemma":[0.99483216,0.0012458761,0.0010190635,0.000119399985,0.00009530906,0.000082461724,0.00039631675,0.000025634477,0.0021836674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984,0.000032374162,0.000016699441,0.000023641798,0.000037191217,0.000050115406],"domain_scores_gemma":[0.9997335,0.000033273584,0.00007843002,0.000032881733,0.000019167677,0.00010276066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027333022,0.00088040996,0.00093770446,0.0003658937,0.00027080067,0.0002861551,0.00036591568,0.00047518685,0.0014977198],"category_scores_gemma":[0.0002874032,0.00022082248,0.00033900095,0.00024211346,0.00058686186,0.00064193865,0.00022214868,0.0015077764,0.00018158839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.027197205,0.0018510583,0.0005763195,0.00018078026,0.00006096207,0.00022478544,0.000051965206,0.0002566043,0.95939386,0.00021119599,0.00020311719,0.009792234],"study_design_scores_gemma":[0.0022306778,0.019006612,0.013646119,0.000019812926,0.00019048936,0.00035223836,0.00012212474,0.0013379123,0.960358,0.0001785345,0.0025336323,0.000023758103],"about_ca_topic_score_codex":0.00040848056,"about_ca_topic_score_gemma":0.0006996362,"teacher_disagreement_score":0.0014977198,"about_ca_system_score_codex":0.00032699894,"about_ca_system_score_gemma":0.00033001992,"threshold_uncertainty_score":0.0050103664},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"}],"label_agreement":"agree"},{"id":"W2021469995","doi":"10.1096/fj.10-173856","title":"Novel 5‐lipoxygenase isoforms affect the biosynthesis of 5‐lipoxygenase products","year":2010,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Atlantic Cancer Research Institute; Fisheries and Oceans Canada; Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; Université de Moncton","funders":"Canadian Institutes of Health Research","keywords":"Gene isoform; Alternative splicing; Exon; Arachidonate 5-lipoxygenase; Lipoxygenase; Biosynthesis; Biology; Molecular biology; RNA splicing; Biochemistry; Enzyme; Gene; RNA; Arachidonic acid","score_opus":0.01212945281965123,"score_gpt":0.22524455418352127,"score_spread":0.21311510136387005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021469995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962005,0.0012491195,0.001941875,0.00004922856,0.000020712334,0.00001289894,0.00013828656,0.000015641737,0.00037184343],"genre_scores_gemma":[0.99559695,0.00085793517,0.0018020666,0.000056502027,0.000015708627,0.000015885644,0.0004968934,0.000007579017,0.001150661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986136,0.00002793374,0.00001433691,0.00003430022,0.000026215805,0.00003583187],"domain_scores_gemma":[0.9998659,0.000039181075,0.000038051152,0.000016247377,0.000016209477,0.000024411285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017110136,0.00025066262,0.00016363563,0.00009472529,0.000076753895,0.00026521715,0.000113298636,0.00024876554,0.001141003],"category_scores_gemma":[0.00014437505,0.00010009979,0.00028610844,0.00008869991,0.00017437049,0.00016422303,0.000105060346,0.00045665007,0.000300549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115245944,0.000013357923,0.00044891352,0.000019004894,0.0000036498132,0.00009531573,0.000008299329,0.000010424505,0.9987204,0.000037425445,0.000008451518,0.00051947497],"study_design_scores_gemma":[0.000034115496,0.00040490922,0.02168555,0.000008583928,0.00005578804,0.0012554148,0.00006016235,0.0004110206,0.97338694,0.00009339238,0.0025979355,0.0000061231717],"about_ca_topic_score_codex":0.00017823731,"about_ca_topic_score_gemma":0.00027783355,"teacher_disagreement_score":0.001141003,"about_ca_system_score_codex":0.00014903687,"about_ca_system_score_gemma":0.0000961697,"threshold_uncertainty_score":0.0038170815},"labels":[],"label_agreement":null},{"id":"W2021737653","doi":"10.1016/j.joca.2015.02.470","title":"Relationship between the gut microbiota, lipopolysaccharide, inflammation, and metabolic osteoarthritis development: Studies in a rat model","year":2015,"lang":"en","type":"article","venue":"Osteoarthritis and Cartilage","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Inflammation; Gut flora; Osteoarthritis; Lipopolysaccharide; Medicine; Biology; Immunology; Pathology","score_opus":0.04056611466921145,"score_gpt":0.267415170871289,"score_spread":0.22684905620207757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021737653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968927,0.0014802478,0.0009785553,0.000112842776,0.000040593306,0.000029663823,0.00012563275,0.000023077326,0.00031675227],"genre_scores_gemma":[0.9909032,0.0028244115,0.0029222583,0.000100524696,0.000053220454,0.00011802881,0.00026001612,0.000021729853,0.0027964874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965274,0.00006925058,0.000023411969,0.00006365435,0.00007706674,0.00011386771],"domain_scores_gemma":[0.9990546,0.00007458022,0.00024808844,0.00012588323,0.000075235504,0.00042152396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062714564,0.0011761956,0.00083892775,0.0014925516,0.0005569177,0.0004977085,0.00048556062,0.00063644076,0.0013980949],"category_scores_gemma":[0.0002946921,0.0005592595,0.000697791,0.00056890765,0.0011909594,0.0008411935,0.000443002,0.001849173,0.0002517166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017621985,0.0050712056,0.0045589753,0.00015143765,0.0000763548,0.00035108894,0.00013288199,0.00018515215,0.9649218,0.00038730138,0.00011779531,0.006424056],"study_design_scores_gemma":[0.0009781264,0.054964304,0.06884721,0.000078440455,0.00069468917,0.0011497373,0.0008959501,0.0028504548,0.86589026,0.0008182652,0.0027175208,0.00011497772],"about_ca_topic_score_codex":0.0016916728,"about_ca_topic_score_gemma":0.0046551344,"teacher_disagreement_score":0.0016916728,"about_ca_system_score_codex":0.00052288605,"about_ca_system_score_gemma":0.0010060314,"threshold_uncertainty_score":0.0046770573},"labels":[],"label_agreement":null},{"id":"W2022097289","doi":"10.1016/j.dci.2008.09.001","title":"Molecular characterization, expression and functional analysis of goldfish (Carassius aurutus L.) interferon gamma","year":2008,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":133,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Proinflammatory cytokine; Recombinant DNA; Spleen; Immune system; Interferon gamma; Nitric oxide; Carassius; Downregulation and upregulation; Interferon; Cytokine; Tumor necrosis factor alpha; Molecular biology; Immunology; Inflammation; Endocrinology; Biochemistry; Gene; Fish <Actinopterygii>","score_opus":0.023851595378050885,"score_gpt":0.2378242759379915,"score_spread":0.21397268055994062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022097289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99632853,0.0013687618,0.0009141179,0.00015860572,0.00001933719,0.000012118944,0.00020857435,0.000009121924,0.0009807148],"genre_scores_gemma":[0.9922684,0.0009431597,0.0014741726,0.0001321349,0.000014296505,0.000025733636,0.0010226328,0.000010501896,0.0041088993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991786,0.000008659308,0.0000071413438,0.000020842846,0.000016018392,0.000029555733],"domain_scores_gemma":[0.99988294,0.000019929723,0.000025348205,0.000016000366,0.000028609526,0.000027066424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015547052,0.00023956281,0.00017323003,0.00029014758,0.00024195077,0.00037232076,0.0001512884,0.00025465147,0.0006348548],"category_scores_gemma":[0.00016513173,0.00015078952,0.00024369224,0.0001412332,0.0002742543,0.00021982339,0.00019033019,0.0004436509,0.00038934802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010497112,0.000009671513,0.00095214124,0.000024735851,0.000004088862,0.0000690698,0.000023678165,0.000025933234,0.997514,0.000114699535,0.000024416213,0.0011326998],"study_design_scores_gemma":[0.00008465653,0.0005907992,0.11792209,0.000039874973,0.00011337373,0.0017243673,0.0005260257,0.0017276743,0.86237544,0.0004777854,0.014395283,0.000022715285],"about_ca_topic_score_codex":0.0016908805,"about_ca_topic_score_gemma":0.002327137,"teacher_disagreement_score":0.0016908805,"about_ca_system_score_codex":0.00046969994,"about_ca_system_score_gemma":0.00030523687,"threshold_uncertainty_score":0.0034078956},"labels":[],"label_agreement":null},{"id":"W2022135107","doi":"10.1016/j.immuni.2007.03.009","title":"Nod1-Mediated Innate Immune Recognition of Peptidoglycan Contributes to the Onset of Adaptive Immunity","year":2007,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":332,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"Takeda Oncology","keywords":"Biology; Peptidoglycan; Innate immune system; NOD1; Acquired immune system; Immunity; Immunology; Immune system; Immune recognition; Pattern recognition receptor; NOD2; Virology; Genetics; Gene","score_opus":0.017777860316982298,"score_gpt":0.2480863898991355,"score_spread":0.2303085295821532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022135107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94638765,0.026381215,0.014561959,0.0014044777,0.00036796895,0.0000822915,0.0005668691,0.00038757263,0.009860023],"genre_scores_gemma":[0.98531383,0.0046925703,0.0034290496,0.00016737604,0.00013185531,0.0000260695,0.00043627125,0.000034807214,0.005768193],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997528,0.000042963078,0.000017060936,0.000044388722,0.000058310547,0.000084485364],"domain_scores_gemma":[0.9996357,0.000037685593,0.00007457636,0.000032591866,0.00007410221,0.00014524318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004987498,0.00044124873,0.00038700935,0.00030500183,0.00023800739,0.00088654744,0.0002614123,0.0004310088,0.0016621313],"category_scores_gemma":[0.0003428658,0.0002380555,0.0002838406,0.00014222761,0.00037405532,0.0006854201,0.00073628785,0.0019136426,0.00075662753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048440424,0.0000544195,0.0013532696,0.00016333863,0.0000067692936,0.0003039737,0.00003640364,0.00020294078,0.984559,0.000942357,0.00041958192,0.011473527],"study_design_scores_gemma":[0.00009645303,0.0007633517,0.067776345,0.000142609,0.000049848466,0.0025087027,0.00028848797,0.003938849,0.8975456,0.0022580228,0.024585979,0.000045776513],"about_ca_topic_score_codex":0.00029022834,"about_ca_topic_score_gemma":0.00037423492,"teacher_disagreement_score":0.0016621313,"about_ca_system_score_codex":0.00048851164,"about_ca_system_score_gemma":0.000445738,"threshold_uncertainty_score":0.005560398},"labels":[],"label_agreement":null},{"id":"W2022227225","doi":"10.1016/j.jaci.2010.05.013","title":"Impaired T-cell receptor activation in IL-1 receptor–associated kinase-4–deficient patients","year":2010,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Receptor; Cell biology; Chemistry; Cancer research; Biology; Medicine; Internal medicine","score_opus":0.012018318073315179,"score_gpt":0.26248016920524264,"score_spread":0.2504618511319275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022227225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959514,0.00050790265,0.00052701647,0.0004298242,0.00005852316,0.000030538817,0.00025943763,0.000069102956,0.002166231],"genre_scores_gemma":[0.9984119,0.00020556923,0.00038800537,0.00015114696,0.000052674302,0.000020342739,0.00015127745,0.000025398589,0.0005936867],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995009,0.00009881859,0.00007759393,0.00012133283,0.00007005617,0.0001312942],"domain_scores_gemma":[0.99917334,0.0002629497,0.00029683992,0.0000505537,0.0000630075,0.00015324444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033682963,0.002482776,0.00091154914,0.0015102589,0.0012517251,0.0012249046,0.0011392881,0.0017551708,0.004916913],"category_scores_gemma":[0.0019069588,0.0005645776,0.0006238614,0.0008051655,0.0012976533,0.0007703354,0.0005418881,0.0011124987,0.0008408144],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012129322,0.0009363531,0.35286698,0.00046721424,0.00047218835,0.3493089,0.0016201519,0.0013063749,0.24635729,0.0028994377,0.0040715486,0.02756422],"study_design_scores_gemma":[0.0008595105,0.0019386314,0.28459632,0.00019265602,0.0009355604,0.6649988,0.0014197271,0.0033842234,0.03291875,0.0021391157,0.00646135,0.00015524181],"about_ca_topic_score_codex":0.0011871539,"about_ca_topic_score_gemma":0.0005349786,"teacher_disagreement_score":0.004916913,"about_ca_system_score_codex":0.0005594656,"about_ca_system_score_gemma":0.00051405473,"threshold_uncertainty_score":0.016448677},"labels":[],"label_agreement":null},{"id":"W2022246343","doi":"10.1097/shk.0b013e318299f774","title":"Perturbed Mononuclear Phagocyte System in Severely Burned and Septic Patients","year":2013,"lang":"en","type":"review","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research","keywords":"Sepsis; Immune system; Immunology; Mononuclear phagocyte system; Medicine; Immunosuppression; Acquired immune system; Burn injury; Severe burn; Innate immune system; Internal medicine","score_opus":0.017777058251863966,"score_gpt":0.252599918441704,"score_spread":0.23482286018984003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022246343","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014804007,0.9990878,0.00006512232,0.00017088014,0.00011084021,0.0000022395438,0.0000073784568,0.0000045140996,0.00040313718],"genre_scores_gemma":[0.0012134676,0.9980843,0.00010850396,0.00014131112,0.00016139344,0.0000042974557,0.000019572171,9.216843e-7,0.0002662525],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998565,0.000026410458,0.000030282683,0.00002441818,0.000046846948,0.000015558098],"domain_scores_gemma":[0.99979573,0.000079336074,0.000036151847,0.0000054176257,0.00005665494,0.000026852324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034524052,0.0007088995,0.001240305,0.0019271402,0.00025166885,0.00067022495,0.0006136661,0.0009712656,0.0018147125],"category_scores_gemma":[0.00054586685,0.00017205402,0.00034033039,0.0014749321,0.0004408657,0.0008298489,0.0005010577,0.0012377399,0.00108985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011059323,0.00006399327,0.0007250561,0.012502275,0.00007257808,0.0006577874,0.00006589581,0.00021334567,0.001441241,0.0013945639,0.024396524,0.95835614],"study_design_scores_gemma":[0.00003931888,0.00020599892,0.0049468367,0.006307629,0.00019865607,0.013220784,0.00015473254,0.00017682591,0.0009041032,0.0023694565,0.97143644,0.000039291815],"about_ca_topic_score_codex":0.0008325046,"about_ca_topic_score_gemma":0.001235032,"teacher_disagreement_score":0.0019271402,"about_ca_system_score_codex":0.0004184112,"about_ca_system_score_gemma":0.0007186784,"threshold_uncertainty_score":0.0060708523},"labels":[],"label_agreement":null},{"id":"W2022267960","doi":"10.1164/rccm.200302-303oc","title":"Modulation of Bacterial Growth by Tumor Necrosis Factor-α <i>In Vitro</i> and <i>In Vivo</i>","year":2003,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; Mount Sinai Hospital","funders":"","keywords":"Tumor necrosis factor alpha; In vivo; Immunology; Cytokine; In vitro; Medicine; Chemokine; Biology; Immune system","score_opus":0.007847073544514362,"score_gpt":0.24896820269223072,"score_spread":0.24112112914771636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022267960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99006116,0.005080614,0.0024250206,0.00014983858,0.00011656138,0.00003960929,0.00041415106,0.000072987066,0.001639989],"genre_scores_gemma":[0.99145234,0.0034397366,0.0026101065,0.00014581144,0.00005360892,0.00007553886,0.0007774753,0.000016118345,0.0014291398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996543,0.00013424276,0.000042184955,0.000043007545,0.000051880466,0.00007440483],"domain_scores_gemma":[0.9998022,0.000036941452,0.00008041269,0.000026398144,0.00001868693,0.00003530997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022587502,0.00039618448,0.00023219992,0.00012990714,0.00009916663,0.00039859745,0.00016433567,0.00020631387,0.00061890803],"category_scores_gemma":[0.00018790884,0.00011393819,0.00023928362,0.00012775199,0.00022020267,0.0001787029,0.0001173657,0.00066894264,0.00039532676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051717664,0.0001182086,0.00016540659,0.00007057333,0.0000057941998,0.000023889352,0.0000088108245,0.000119143006,0.99736065,0.00005532506,0.00006599542,0.0014889772],"study_design_scores_gemma":[0.000037454112,0.0020320257,0.0020315081,0.0000097665015,0.00001945877,0.00014950502,0.000016134458,0.00071578857,0.99350595,0.000033728396,0.0014443882,0.0000043293317],"about_ca_topic_score_codex":0.00031718143,"about_ca_topic_score_gemma":0.00030425627,"teacher_disagreement_score":0.00061890803,"about_ca_system_score_codex":0.00029064482,"about_ca_system_score_gemma":0.00016344646,"threshold_uncertainty_score":0.0021088123},"labels":[],"label_agreement":null},{"id":"W2022363056","doi":"10.1007/s00251-004-0672-3","title":"The dominant MHC class I gene is adjacent to the polymorphic TAP2 gene in the duck, Anas platyrhynchos","year":2004,"lang":"en","type":"article","venue":"Immunogenetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Heritage Foundation for Medical Research","keywords":"Biology; Genetics; MHC class I; Major histocompatibility complex; Gene; Locus (genetics); Complementary DNA; Molecular biology; Southern blot; CD74; cDNA library","score_opus":0.010679030989006912,"score_gpt":0.2313696410139459,"score_spread":0.22069061002493898,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022363056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989555,0.00015495483,0.00032588816,0.000019115882,0.00000764451,0.0000021534117,0.000108770415,0.0000091356105,0.00041680993],"genre_scores_gemma":[0.99822956,0.00010271378,0.00042646678,0.000035496218,0.0000105573135,0.000005130489,0.00019012835,0.000008609292,0.0009912341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999045,0.000005672125,0.000006651997,0.000046617577,0.000018022296,0.000018477116],"domain_scores_gemma":[0.9997546,0.000034131455,0.00009920584,0.000013653031,0.000028009072,0.00007048198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000050409577,0.00019604129,0.00022515515,0.0005518826,0.0003409695,0.00026004037,0.00020823642,0.00026758076,0.00089233194],"category_scores_gemma":[0.00012456389,0.00019835851,0.00016266147,0.00022513753,0.00042019293,0.00018753171,0.00024665016,0.00047256536,0.0003813766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012485763,0.000009671295,0.0035533013,0.000022308526,0.000005050685,0.00038710807,0.00007903261,0.000036336056,0.9941257,0.000060265946,0.000024073122,0.0015722505],"study_design_scores_gemma":[0.00007732557,0.00070250774,0.84355265,0.00004305832,0.000107608495,0.008038004,0.0010567645,0.0014090806,0.14031109,0.0004360797,0.0042194566,0.00004635932],"about_ca_topic_score_codex":0.0029106971,"about_ca_topic_score_gemma":0.004618352,"teacher_disagreement_score":0.0029106971,"about_ca_system_score_codex":0.0003904436,"about_ca_system_score_gemma":0.00023475187,"threshold_uncertainty_score":0.005787492},"labels":[],"label_agreement":null},{"id":"W2022651196","doi":"10.1016/j.immuni.2005.09.016","title":"Human TLR-7-, -8-, and -9-Mediated Induction of IFN-α/β and -λ Is IRAK-4 Dependent and Redundant for Protective Immunity to Viruses","year":2005,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":272,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto; Child and Family Research Institute","funders":"","keywords":"Biology; Immunity; Virology; Innate immune system; Immunology; Microbiology; Immune system","score_opus":0.025545709103200493,"score_gpt":0.2871475934912167,"score_spread":0.26160188438801624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022651196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928092,0.0010308995,0.0024574378,0.00013287824,0.000057170553,0.000033913933,0.0006694754,0.00010185864,0.0027072555],"genre_scores_gemma":[0.99125856,0.00052200636,0.002652363,0.00007193101,0.000030147832,0.000037780654,0.0020090581,0.000026928228,0.0033911415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997074,0.000051614894,0.000026772936,0.00004382183,0.000047867998,0.00012242257],"domain_scores_gemma":[0.99979013,0.000033942644,0.000045904995,0.0000633193,0.000025863113,0.000040825675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002813114,0.0004213907,0.00026526343,0.00025218408,0.0002300735,0.0004364012,0.00022268499,0.00025770476,0.004410442],"category_scores_gemma":[0.00024472206,0.00024096131,0.00040316704,0.00011307307,0.00021237765,0.0002143189,0.00024404729,0.00076824357,0.002085225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009169442,0.000076004035,0.00084694644,0.00003651506,0.000009146768,0.00009431697,0.000015377496,0.000093261006,0.9939663,0.00035665766,0.0001668286,0.0034216417],"study_design_scores_gemma":[0.00009567198,0.000437272,0.012453923,0.000015074795,0.0000258937,0.0011657445,0.00005172691,0.0009222876,0.98024803,0.000417455,0.004158902,0.000007887731],"about_ca_topic_score_codex":0.00021109429,"about_ca_topic_score_gemma":0.00022587372,"teacher_disagreement_score":0.004410442,"about_ca_system_score_codex":0.00038724235,"about_ca_system_score_gemma":0.00030502537,"threshold_uncertainty_score":0.014754415},"labels":[],"label_agreement":null},{"id":"W2022901080","doi":"10.1155/2010/437246","title":"Toll-Like Receptors: Role in Dermatological Disease","year":2010,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Receptor; Pathogen-associated molecular pattern; Pattern recognition receptor; Innate immune system; Biology; Immunology; Immune system; Toll-like receptor; Genetics","score_opus":0.003610841251439567,"score_gpt":0.21016724724394079,"score_spread":0.20655640599250122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2022901080","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026309961,0.9455378,0.0021326724,0.006810361,0.0010242999,0.000030178024,0.0001523501,0.000087568864,0.017914783],"genre_scores_gemma":[0.3455589,0.6152872,0.006777873,0.0037968806,0.0030358725,0.000048005604,0.00020937841,0.0000231044,0.02526284],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999905,0.000033002678,0.0000082054485,0.000015649004,0.000017148217,0.0000209706],"domain_scores_gemma":[0.9999002,0.00002037594,0.000021720462,0.0000037930338,0.000016079053,0.00003785736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028920194,0.00029718367,0.00031050807,0.00042623692,0.0002659824,0.0007596087,0.0002920495,0.0009164486,0.0049804547],"category_scores_gemma":[0.0002293022,0.00007162711,0.00015757774,0.0003351884,0.0003703313,0.0006324744,0.00041714773,0.00070394727,0.0014079699],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012806298,0.00044795798,0.008129182,0.004044835,0.00006901506,0.007173571,0.00025123084,0.000397999,0.103583105,0.025746096,0.033064783,0.8158117],"study_design_scores_gemma":[0.00021023012,0.0012088906,0.028676458,0.0019727994,0.00016505212,0.06312262,0.00067060615,0.0009916783,0.022440564,0.023993606,0.856463,0.00008452183],"about_ca_topic_score_codex":0.00017106367,"about_ca_topic_score_gemma":0.00017377578,"teacher_disagreement_score":0.0049804547,"about_ca_system_score_codex":0.00032985132,"about_ca_system_score_gemma":0.00031895415,"threshold_uncertainty_score":0.016661227},"labels":[],"label_agreement":null},{"id":"W2023142724","doi":"10.3389/fcimb.2013.00003","title":"Recognition of lipid A variants by the TLR4-MD-2 receptor complex","year":2013,"lang":"en","type":"review","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":271,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Lipid A; TLR4; Biology; Receptor; Lipopolysaccharide; Innate immune system; Immune system; Pattern recognition receptor; Toll-like receptor; Signal transduction; Cell biology; Immunology; Biochemistry","score_opus":0.025657665282704686,"score_gpt":0.2467829942720737,"score_spread":0.221125328989369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023142724","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009921533,0.98173183,0.0018225932,0.00044843616,0.0004397555,0.000029702738,0.00020998907,0.00007099507,0.00532522],"genre_scores_gemma":[0.01760363,0.97521305,0.0016673824,0.0005077311,0.0003750976,0.000039654922,0.00041933643,0.00000749752,0.004166652],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989533,0.000013331261,0.000019888957,0.000023366652,0.000029825842,0.000018258794],"domain_scores_gemma":[0.999949,0.000011558215,0.000013734558,0.0000015554457,0.000015239656,0.000008983555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013093825,0.0004423555,0.00049990945,0.0007994461,0.00014706474,0.00046166923,0.00034300686,0.0004143795,0.0013600425],"category_scores_gemma":[0.00018383068,0.00016094172,0.00032908932,0.000531763,0.00013378079,0.00054735533,0.00028844137,0.00066210877,0.0011739469],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008126041,0.00014423793,0.0023142246,0.018089106,0.00022289403,0.0014230018,0.00023801599,0.0016839033,0.17003234,0.0071323738,0.03115046,0.76675683],"study_design_scores_gemma":[0.000017479106,0.0003797589,0.0045925733,0.00073600805,0.00014141512,0.0031881037,0.000111257235,0.00037119538,0.021951435,0.0012829864,0.967186,0.000041776606],"about_ca_topic_score_codex":0.00052589807,"about_ca_topic_score_gemma":0.0004136829,"teacher_disagreement_score":0.0013600425,"about_ca_system_score_codex":0.00038460284,"about_ca_system_score_gemma":0.00034709024,"threshold_uncertainty_score":0.0045497417},"labels":[],"label_agreement":null},{"id":"W2023269967","doi":"10.1016/j.jneuroim.2005.06.016","title":"Toll-like receptor-2 deficiency is associated with enhanced brain TNF gene expression during pneumococcal meningitis","year":2005,"lang":"en","type":"article","venue":"Journal of Neuroimmunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"TLR2; CD14; Meningitis; Toll-like receptor; Tumor necrosis factor alpha; Biology; Receptor; Inflammation; Immunology; Gene expression; Gene; Medicine; TLR4; Innate immune system; Genetics","score_opus":0.008411805699659788,"score_gpt":0.22228456383296666,"score_spread":0.21387275813330686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023269967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99895227,0.0003983625,0.0002799758,0.00004588617,0.000017198012,0.000008682733,0.00009133373,0.000012896708,0.00019335719],"genre_scores_gemma":[0.999213,0.0002158981,0.00016811531,0.000025520161,0.000024124794,0.00001433688,0.0001182927,0.000007012043,0.00021374474],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997274,0.000061869396,0.000035682697,0.00004909451,0.000048680362,0.00007737577],"domain_scores_gemma":[0.9990258,0.00016744544,0.00045977795,0.000064157895,0.000049609913,0.00023313506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000246772,0.0006556457,0.00061988505,0.0008069194,0.0003672958,0.0004242059,0.00031413083,0.0006456028,0.00093051814],"category_scores_gemma":[0.0008679455,0.00043355193,0.00031786313,0.00039058022,0.001125528,0.00033243911,0.00036687465,0.000946681,0.00024448233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0112980865,0.0001986565,0.010717354,0.00012711057,0.00006170688,0.01060838,0.000121195175,0.00009168782,0.9647423,0.00012261175,0.00010581603,0.0018050555],"study_design_scores_gemma":[0.0004011516,0.0026460951,0.53337795,0.00005984319,0.00027015188,0.048581876,0.00072045164,0.0011941487,0.41120598,0.00061547436,0.00087036385,0.00005657811],"about_ca_topic_score_codex":0.00075743545,"about_ca_topic_score_gemma":0.00065120985,"teacher_disagreement_score":0.00093051814,"about_ca_system_score_codex":0.00049616926,"about_ca_system_score_gemma":0.0003424694,"threshold_uncertainty_score":0.0035999417},"labels":[],"label_agreement":null},{"id":"W2023455126","doi":"10.1038/nri3515","title":"Scavenger receptors in homeostasis and immunity","year":2013,"lang":"en","type":"review","venue":"Nature reviews. Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":858,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Scavenger receptor; Receptor; Immune receptor; Biology; Immune system; Cell biology; Rhodopsin-like receptors; Class C GPCR; Immunology; Biochemistry; Metabotropic receptor; Lipoprotein; Cholesterol","score_opus":0.025092155263656223,"score_gpt":0.30924630237454453,"score_spread":0.2841541471108883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023455126","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000050027687,0.99686664,0.00017707337,0.0005987143,0.001251059,0.0000041122917,0.00001775464,0.000011839228,0.0010227489],"genre_scores_gemma":[0.0005893037,0.99465126,0.00026436851,0.0005274543,0.0019838165,0.000009812697,0.000052679323,0.0000029541052,0.0019184272],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997451,0.00003285296,0.000031235715,0.00003208461,0.00012209907,0.0000366617],"domain_scores_gemma":[0.9996532,0.000096911775,0.00005351543,0.0000148623985,0.000117128024,0.00006436149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069192384,0.0012099987,0.0016022193,0.0015624185,0.00036013193,0.0011979395,0.0011154765,0.0015680642,0.0037929886],"category_scores_gemma":[0.00088726793,0.00036383956,0.00038993085,0.0019685258,0.0007855222,0.0018442185,0.001453842,0.0031628353,0.0038238352],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009000145,0.0000381588,0.00009478365,0.0042978837,0.000042939726,0.00009585439,0.000025581276,0.00020698429,0.001995555,0.0028077525,0.11532256,0.874982],"study_design_scores_gemma":[0.000020240443,0.00003688392,0.00046910378,0.0014976587,0.00004566338,0.00042355814,0.00002919648,0.000067218374,0.0001864734,0.0026064836,0.99460274,0.000014737951],"about_ca_topic_score_codex":0.00089646596,"about_ca_topic_score_gemma":0.0020479017,"teacher_disagreement_score":0.0037929886,"about_ca_system_score_codex":0.00071540836,"about_ca_system_score_gemma":0.0013271892,"threshold_uncertainty_score":0.012688875},"labels":[],"label_agreement":null},{"id":"W2023772140","doi":"10.1016/s0264-410x(00)00496-5","title":"The potential of oligodeoxynucleotides as mucosal and parenteral adjuvants","year":2001,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"Medical Research Council Canada","keywords":"CpG Oligodeoxynucleotide; Adjuvant; Toxoid; CpG site; Immune system; Immunology; Nasal administration; Medicine; Antigen; Tetanus; Cholera toxin; Immunization; Antibody; Vaccination; Biology; Internal medicine","score_opus":0.004889206620223244,"score_gpt":0.22279279887353984,"score_spread":0.2179035922533166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023772140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77780896,0.15750064,0.043020114,0.002148649,0.0013609771,0.00011632701,0.00029180755,0.00022562689,0.017526913],"genre_scores_gemma":[0.9267539,0.038251694,0.020609459,0.0005945821,0.000289614,0.00011688168,0.00024837878,0.00003459071,0.013100987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999205,0.00003045414,0.0000041569997,0.000012317875,0.000014248448,0.000018245433],"domain_scores_gemma":[0.9999014,0.000040603954,0.00001411173,0.000008393086,0.00001295007,0.000022469505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037678407,0.00039189888,0.00025330725,0.00016328837,0.00010419951,0.000444516,0.00021611172,0.0005904293,0.0011685281],"category_scores_gemma":[0.0002693579,0.00011354524,0.000120464094,0.00010053169,0.00033303327,0.00041141373,0.00026562254,0.0005609342,0.00030584686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001528783,0.00016326383,0.00037767153,0.00037946875,0.0000132516325,0.00016372629,0.00003412259,0.0013990748,0.90582764,0.008201134,0.0005292624,0.08138248],"study_design_scores_gemma":[0.00019470933,0.0041292734,0.00093218347,0.00011127135,0.00007244212,0.0005873693,0.00006246182,0.003317917,0.92700684,0.005509984,0.058050692,0.00002480977],"about_ca_topic_score_codex":0.0001681832,"about_ca_topic_score_gemma":0.00034886325,"teacher_disagreement_score":0.0011685281,"about_ca_system_score_codex":0.00021419408,"about_ca_system_score_gemma":0.0003103808,"threshold_uncertainty_score":0.003909111},"labels":[],"label_agreement":null},{"id":"W2024324060","doi":"10.1007/s00335-005-0132-x","title":"Tlr5 is not primarily associated with susceptibility to Salmonella Typhimurium infection in MOLF/Ei mice","year":2006,"lang":"en","type":"article","venue":"Mammalian Genome","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Montreal General Hospital; Institut National de la Recherche Scientifique; McGill University; McGill Genome Centre","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"TLR5; Flagellin; Biology; Congenic; Salmonella; Allele; Locus (genetics); Genetics; Gene; Phenotype; Microbiology; Molecular biology; Toll-like receptor; Receptor; Innate immune system; Bacteria","score_opus":0.008242933471366667,"score_gpt":0.21002862786402263,"score_spread":0.20178569439265595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024324060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99580044,0.00065950485,0.0010160601,0.00024471385,0.000029563127,0.000013653585,0.0012943832,0.00012052527,0.00082122465],"genre_scores_gemma":[0.9907308,0.00041033854,0.0013994605,0.00029735683,0.000040616327,0.0000516845,0.0019293262,0.00014325076,0.0049970737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993555,0.00007562899,0.00006004243,0.00018983756,0.00010654754,0.00021252265],"domain_scores_gemma":[0.998379,0.0001104622,0.00086139987,0.00011133855,0.00007024003,0.0004675023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003438555,0.0009905027,0.00063663797,0.00272226,0.0004178759,0.0007652649,0.0006335685,0.0015043475,0.0050466615],"category_scores_gemma":[0.00033781014,0.0007220711,0.00064581604,0.0005428559,0.00083884224,0.0007002529,0.0004088715,0.001933708,0.0008562347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014621681,0.00011609497,0.0013834245,0.00003395424,0.000019450084,0.00017676575,0.000023991115,0.000039107523,0.9959143,0.00013308665,0.00007545846,0.00062215904],"study_design_scores_gemma":[0.0002498591,0.0015864315,0.09341701,0.000054606186,0.0001986888,0.0038768307,0.00036663917,0.0012849641,0.8958093,0.00036068275,0.0027436302,0.000051339608],"about_ca_topic_score_codex":0.0008343872,"about_ca_topic_score_gemma":0.0013919213,"teacher_disagreement_score":0.0050466615,"about_ca_system_score_codex":0.000534701,"about_ca_system_score_gemma":0.00028990532,"threshold_uncertainty_score":0.016882777},"labels":[],"label_agreement":null},{"id":"W2024495468","doi":"10.1002/ddr.10433","title":"Pharmacogenomics in sepsis and septic shock","year":2005,"lang":"en","type":"article","venue":"Drug Development Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Pharmacogenomics; Candidate gene; Single-nucleotide polymorphism; Haplotype; Sepsis; Genomics; Bioinformatics; Medicine; Biology; Allele; Genetics; Gene; Genome; Immunology; Genotype","score_opus":0.03731906316939672,"score_gpt":0.33795357484999106,"score_spread":0.30063451168059435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024495468","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35835594,0.52571064,0.04310789,0.04457432,0.0009231647,0.00014275977,0.0026096238,0.00019717538,0.024378542],"genre_scores_gemma":[0.88877344,0.092943735,0.012151271,0.0023300399,0.0010608275,0.000075467346,0.0006495286,0.000012142733,0.0020035664],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987972,0.0009024196,0.000067343935,0.00006320444,0.00014032576,0.000029444187],"domain_scores_gemma":[0.99726886,0.0018797662,0.00050981063,0.00006953497,0.00016588451,0.00010618704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019072009,0.00022126107,0.000654163,0.0014003849,0.00017169575,0.00082115544,0.00018046057,0.00052473915,0.002519343],"category_scores_gemma":[0.0036629604,0.000082117745,0.0002623166,0.0021692666,0.00043426937,0.00030262728,0.00039934958,0.0005471626,0.00030121423],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020307375,0.0003796999,0.23719205,0.0036590418,0.0016591222,0.0027240876,0.00021217369,0.004824342,0.010132585,0.027172578,0.010250065,0.6997635],"study_design_scores_gemma":[0.00047403874,0.0028783933,0.62356734,0.002288083,0.0020208799,0.014691249,0.00062008004,0.017635081,0.011219716,0.20725733,0.11719398,0.00015380689],"about_ca_topic_score_codex":0.00040285182,"about_ca_topic_score_gemma":0.00051414245,"teacher_disagreement_score":0.002519343,"about_ca_system_score_codex":0.0003073402,"about_ca_system_score_gemma":0.00059610745,"threshold_uncertainty_score":0.010086358},"labels":[],"label_agreement":null},{"id":"W2024497753","doi":"10.1074/jbc.m308135200","title":"Interferon Regulatory Factor-3-mediated Activation of the Interferon-sensitive Response Element by Toll-like receptor (TLR) 4 but Not TLR3 Requires the p65 Subunit of NF-κ","year":2003,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Science Foundation Ireland","keywords":"TLR3; Toll-like receptor; Interferon regulatory factors; Interferon; Protein subunit; Immunology; Biology; Cancer research; Innate immune system; Immune system; Gene; Genetics","score_opus":0.01728796442998575,"score_gpt":0.23078339014282817,"score_spread":0.2134954257128424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024497753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97861713,0.003219278,0.013544311,0.00018328849,0.00016778197,0.00010257402,0.0007700135,0.00015173024,0.003243919],"genre_scores_gemma":[0.9853756,0.0015175624,0.0067805387,0.00012678088,0.000022881435,0.00008379682,0.00201583,0.00004331451,0.0040336982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997173,0.000051386287,0.000027452632,0.00005119054,0.00007157504,0.000081029],"domain_scores_gemma":[0.99983025,0.000035980807,0.00006107137,0.000026474723,0.000021117277,0.00002519403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004046043,0.0008844357,0.0002982822,0.00024026597,0.00017808068,0.00031653018,0.00021382944,0.00032879578,0.002151674],"category_scores_gemma":[0.00016672112,0.00020549577,0.0010343273,0.00017584632,0.00042310846,0.00029443874,0.00027645586,0.0010283696,0.00084058335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055983535,0.000012939622,0.000069798596,0.000027586077,0.0000041888984,0.000028079454,0.0000060287416,0.000018118533,0.9993424,0.000053346655,0.000013518604,0.00036798947],"study_design_scores_gemma":[0.000030281042,0.00018377676,0.003247265,0.000011676809,0.000016352667,0.0003500363,0.000022704211,0.00047217784,0.9937736,0.00008079906,0.0018033703,0.000007941854],"about_ca_topic_score_codex":0.00042496523,"about_ca_topic_score_gemma":0.00049707276,"teacher_disagreement_score":0.002151674,"about_ca_system_score_codex":0.00035995326,"about_ca_system_score_gemma":0.00027638653,"threshold_uncertainty_score":0.0071980357},"labels":[],"label_agreement":null},{"id":"W2024821528","doi":"10.1016/s1873-9946(14)50001-3","title":"O-01: IL-10 receptor dependent signals regulate the generation and function of anti-inflammatory macrophages in mice and humans","year":2014,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; McMaster Children's Hospital","funders":"","keywords":"Medical school; Sick child; Medicine; Family medicine; Demography; Gerontology; Pediatrics; Sociology","score_opus":0.008255742239521356,"score_gpt":0.21629433996766895,"score_spread":0.2080385977281476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024821528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879382,0.0028398668,0.0014584308,0.0013984501,0.00015294275,0.000043396725,0.00074961403,0.00014609747,0.0052729114],"genre_scores_gemma":[0.991819,0.001130496,0.0009605711,0.0007935129,0.00008877982,0.00005952999,0.0006403795,0.00005592677,0.004451769],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975425,0.00006390156,0.000015194693,0.00006338831,0.00003771131,0.00006569629],"domain_scores_gemma":[0.9997876,0.000027119393,0.000055353747,0.000037754024,0.000018049379,0.00007415646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033145805,0.000549886,0.00030828634,0.00043850057,0.00026627164,0.000781769,0.00022864179,0.0009179915,0.003498609],"category_scores_gemma":[0.00035806507,0.0002489632,0.00028711784,0.000119844364,0.00046498387,0.00028455514,0.00034951488,0.0009868447,0.0012478948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011574017,0.0015486157,0.036249574,0.00018609848,0.00009572406,0.0030250845,0.00025082947,0.00021687099,0.90204287,0.0020490133,0.0058905925,0.036870804],"study_design_scores_gemma":[0.0038978974,0.01573307,0.59866285,0.00065679266,0.00057212217,0.044561908,0.0013774917,0.0031853146,0.24787304,0.0041229725,0.079189286,0.00016723145],"about_ca_topic_score_codex":0.0004487363,"about_ca_topic_score_gemma":0.00031651204,"teacher_disagreement_score":0.003498609,"about_ca_system_score_codex":0.00024019358,"about_ca_system_score_gemma":0.00023307673,"threshold_uncertainty_score":0.011704028},"labels":[],"label_agreement":null},{"id":"W2024884374","doi":"10.1097/00003246-200108000-00036","title":"Soluble L-selectin Levels in Experimental Human Endotoxemia","year":2001,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"","keywords":"Medicine; Intensive care medicine; Pharmacology","score_opus":0.03322561864979911,"score_gpt":0.3434039344899458,"score_spread":0.31017831584014666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024884374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998958,0.0002972756,0.0003386076,0.000031193085,0.000023894136,0.000019098052,0.00010791301,0.000012748706,0.00021111727],"genre_scores_gemma":[0.9983348,0.00023946632,0.0003564705,0.000036774763,0.000041247138,0.000046851193,0.00024873952,0.0000051112656,0.00069048465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997888,0.000051136136,0.000022132372,0.000031513373,0.00005119298,0.00005508918],"domain_scores_gemma":[0.99951494,0.00010298216,0.00012443967,0.00006640232,0.000041512594,0.00014976972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003442877,0.0005480395,0.0005423783,0.0004383238,0.000302827,0.00048799987,0.00016500235,0.0005650013,0.0012605397],"category_scores_gemma":[0.00066066056,0.00026864544,0.00021461867,0.00028519364,0.00081808673,0.0004460349,0.0002374439,0.0011469201,0.00020396302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.04586089,0.0013450459,0.004097618,0.00013691932,0.00005452064,0.0010928045,0.0002486674,0.00026152364,0.9422273,0.00039751668,0.00015157567,0.0041257255],"study_design_scores_gemma":[0.0012926161,0.017672287,0.092383385,0.000022803466,0.00024192734,0.0025551098,0.00035675662,0.0031940762,0.88056564,0.00039599437,0.0012779813,0.00004144419],"about_ca_topic_score_codex":0.00049724383,"about_ca_topic_score_gemma":0.00044300008,"teacher_disagreement_score":0.0012605397,"about_ca_system_score_codex":0.00034079337,"about_ca_system_score_gemma":0.0002914762,"threshold_uncertainty_score":0.004216969},"labels":[],"label_agreement":null},{"id":"W2024944874","doi":"10.1038/nm.2556","title":"Nuclear factor-κB1 controls the functional maturation of dendritic cells and prevents the activation of autoreactive T cells","year":2011,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Cytotoxic T cell; Autoimmunity; Immunology; Biology; Granzyme B; Cell biology; Dendritic cell; Immune system; Tumor necrosis factor alpha; CD8","score_opus":0.010882259967886911,"score_gpt":0.2167722087065112,"score_spread":0.2058899487386243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2024944874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9767617,0.009950969,0.006233598,0.0010135686,0.0005266106,0.00004320849,0.0005820166,0.0004668814,0.0044214507],"genre_scores_gemma":[0.99407,0.0013253771,0.0011097072,0.000090288915,0.00006207947,0.000020065436,0.00027220778,0.0000919694,0.0029582907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99942183,0.00008576449,0.000041329677,0.00010819586,0.00013724407,0.00020561299],"domain_scores_gemma":[0.9993069,0.000066402055,0.00020484351,0.00012487249,0.00007953223,0.00021736379],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005054175,0.0004537825,0.00048660292,0.0004323468,0.00041946993,0.00086905225,0.000525046,0.00048542436,0.0023657482],"category_scores_gemma":[0.0005900082,0.00031967502,0.0003527016,0.0001577443,0.00074021,0.0004477913,0.0004485567,0.0018873545,0.0011426107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054368493,0.000050840452,0.00027680874,0.00006781098,0.0000071711816,0.00006257098,0.00002586326,0.00008432711,0.9951261,0.0004510764,0.00021455379,0.003089175],"study_design_scores_gemma":[0.0001085157,0.00034429596,0.003720381,0.000023544184,0.00002685529,0.00050251326,0.00008628397,0.00071323046,0.9854731,0.0005227327,0.008463209,0.000015345875],"about_ca_topic_score_codex":0.00043033264,"about_ca_topic_score_gemma":0.00080593803,"teacher_disagreement_score":0.0023657482,"about_ca_system_score_codex":0.0006125383,"about_ca_system_score_gemma":0.000566887,"threshold_uncertainty_score":0.0079141855},"labels":[],"label_agreement":null},{"id":"W2025308562","doi":"10.1046/j.1365-2982.2003.00457.x","title":"The expression and role of Fas ligand in intestinal inflammation","year":2004,"lang":"en","type":"article","venue":"Neurogastroenterology & Motility","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Alberta Heritage Foundation for Medical Research; Canadian Association of Gastroenterology","keywords":"Fas ligand; Ileitis; Inflammation; Colitis; Immunology; Enteric nervous system; Immune system; Biology; Pathogenesis; Medicine; Internal medicine; Endocrinology; Apoptosis; Crohn's disease","score_opus":0.004752778699197453,"score_gpt":0.20639467236672807,"score_spread":0.2016418936675306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025308562","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96797544,0.028830156,0.0011767435,0.00026634976,0.000018142742,0.00000782329,0.00009068448,0.000025773597,0.0016089531],"genre_scores_gemma":[0.9924562,0.0051360237,0.0010586772,0.000048748123,0.000016949927,0.0000072752105,0.00008026828,0.0000032544324,0.001192622],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986696,0.000040353065,0.0000115520215,0.000018035204,0.000027288734,0.00003583217],"domain_scores_gemma":[0.99988437,0.000013929566,0.000045360575,0.000007273774,0.000016488251,0.000032516637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019440103,0.00020383626,0.00015044154,0.00039428385,0.00013907623,0.0003827306,0.000097351935,0.0003434162,0.0006575659],"category_scores_gemma":[0.00016492353,0.00009894824,0.000108385764,0.00016976311,0.00029166634,0.0003892456,0.00019586211,0.00033496894,0.00018311114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000604895,0.0000291418,0.002338047,0.00015303018,0.0000062376103,0.00033862318,0.00006251895,0.00009798872,0.9862514,0.00038752114,0.000045685,0.009684843],"study_design_scores_gemma":[0.00014446766,0.0029329371,0.0968324,0.00016554233,0.00008305135,0.0059972163,0.00044733533,0.0016570432,0.87414414,0.001953452,0.015609575,0.00003286028],"about_ca_topic_score_codex":0.0001869365,"about_ca_topic_score_gemma":0.00024221136,"teacher_disagreement_score":0.0006575659,"about_ca_system_score_codex":0.00035122174,"about_ca_system_score_gemma":0.00011033497,"threshold_uncertainty_score":0.0025482774},"labels":[],"label_agreement":null},{"id":"W2025387586","doi":"10.1016/j.molimm.2008.09.020","title":"Multiple molecular regions confer intracellular localization of bovine Toll-like receptor 8","year":2008,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"","keywords":"Ectodomain; Intracellular; Cell biology; Extracellular; Biology; Transfection; Cytoplasm; Receptor; Subcellular localization; Fusion protein; Recombinant DNA; Gene; Biochemistry","score_opus":0.008371476589974143,"score_gpt":0.2025546234769619,"score_spread":0.19418314688698776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025387586","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943514,0.00089801435,0.0031094123,0.00011595314,0.000033417564,0.000013566118,0.00016679967,0.00003052883,0.0012809371],"genre_scores_gemma":[0.99650013,0.00020954643,0.0017084603,0.00008279842,0.000013911205,0.000013066947,0.000533347,0.000023898647,0.0009148471],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99966383,0.00009247034,0.000027452317,0.00006675104,0.000046781228,0.000102662016],"domain_scores_gemma":[0.9992465,0.00026035853,0.00022919179,0.000070716014,0.000058791695,0.00013444174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002973951,0.0004209888,0.00028446235,0.00024425538,0.00030646974,0.00058411213,0.0003593942,0.00052570784,0.0018686915],"category_scores_gemma":[0.00047045766,0.00031485254,0.0003863425,0.00012579166,0.00039205595,0.00041055237,0.00047165787,0.00087827374,0.0009878018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020370707,0.000016457676,0.00011700423,0.000018077959,0.0000041547437,0.00006033267,0.000019092477,0.000042079126,0.9990263,0.00018952417,0.00002047304,0.00028282116],"study_design_scores_gemma":[0.000059869843,0.00024457814,0.009622974,0.000021399106,0.000035073437,0.0005721247,0.000094345814,0.00096587534,0.98550874,0.0001778623,0.002685561,0.000011531441],"about_ca_topic_score_codex":0.000999683,"about_ca_topic_score_gemma":0.0013507626,"teacher_disagreement_score":0.0018686915,"about_ca_system_score_codex":0.0007931137,"about_ca_system_score_gemma":0.00028699852,"threshold_uncertainty_score":0.0062513947},"labels":[],"label_agreement":null},{"id":"W2025477540","doi":"10.1182/blood-2006-10-053256","title":"TLR3 ligand stimulates fully functional memory CD8+ T cells in the absence of CD4+ T-cell help","year":2007,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Universidad Pública de Navarra; Institut National Du Cancer; Universidad de Navarra","keywords":"Cytotoxic T cell; Priming (agriculture); CD8; T cell; Biology; Cell biology; TLR7; Immunology; Toll-like receptor; Immune system; Innate immune system; Biochemistry; In vitro","score_opus":0.00864944446287636,"score_gpt":0.20812218058648582,"score_spread":0.19947273612360947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025477540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968927,0.0007709242,0.0008757587,0.000050771258,0.000018503864,0.00001832163,0.00012949709,0.00006681048,0.0011766333],"genre_scores_gemma":[0.9973496,0.00023777544,0.00094153604,0.000060583116,0.000013766761,0.000022584582,0.00028464184,0.000015026995,0.0010744028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999811,0.00005173261,0.000012854405,0.000021000187,0.000029536035,0.00007387605],"domain_scores_gemma":[0.9998048,0.00006167364,0.000032463828,0.000030657822,0.00002027054,0.000050168634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001565747,0.00032950717,0.00020783217,0.00012340245,0.00006490587,0.00026791007,0.000129085,0.00025855532,0.0013722426],"category_scores_gemma":[0.0002202583,0.00013409727,0.00016980356,0.000068072724,0.00014087853,0.00016635035,0.00018793982,0.0004754202,0.0006663101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035143917,0.0000598331,0.00027058247,0.000039775034,0.000003932985,0.000074857235,0.000013389956,0.000105081184,0.9970592,0.00006348478,0.000065765526,0.0018927362],"study_design_scores_gemma":[0.00015235951,0.0016428165,0.004649562,0.000014923637,0.000022664022,0.0006661311,0.000044179465,0.0014658575,0.9884863,0.00018622934,0.0026624578,0.000006594097],"about_ca_topic_score_codex":0.00014286058,"about_ca_topic_score_gemma":0.00024020321,"teacher_disagreement_score":0.0013722426,"about_ca_system_score_codex":0.00014606243,"about_ca_system_score_gemma":0.00013340844,"threshold_uncertainty_score":0.0045906305},"labels":[],"label_agreement":null},{"id":"W2025713348","doi":"10.1186/cc9685","title":"Safety, pharmacokinetics, and pharmacodynamics of 4-hour intravenous infusion of eritoran tetrasodium in healthy Japanese and Caucasian males","year":2011,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Pharmacodynamics; Pharmacokinetics; Pharmacology; Internal medicine; Anesthesia","score_opus":0.01684491864902524,"score_gpt":0.28183240417615657,"score_spread":0.2649874855271313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025713348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99931526,0.00023257828,0.00015017299,0.00001538861,0.0000048331526,0.000024498027,0.000059031718,0.000008309082,0.00018991792],"genre_scores_gemma":[0.9990163,0.00021648168,0.00022372171,0.000053424083,0.000023224264,0.000032994358,0.00010500076,0.000005342044,0.00032355374],"study_design_codex":"bench_or_experimental","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9997147,0.000107018095,0.000021168848,0.00006751181,0.00005402779,0.000035595775],"domain_scores_gemma":[0.99932194,0.000091713235,0.00025982826,0.000052620195,0.000050678816,0.0002232811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047726958,0.00040142058,0.0007255507,0.0002261403,0.00024883673,0.0002752883,0.0001626317,0.00036381494,0.0007375902],"category_scores_gemma":[0.0008884146,0.00017204433,0.00026645118,0.0002109279,0.0003239077,0.00026941134,0.000118060736,0.0005377239,0.00026028123],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.2804104,0.019494474,0.24017175,0.00033614712,0.0010243414,0.0019688583,0.0022442017,0.0017226677,0.28210813,0.00023714594,0.0010119587,0.16926989],"study_design_scores_gemma":[0.0048919558,0.28921127,0.6769512,0.000027883463,0.0007572298,0.0019395438,0.0005883226,0.0028318516,0.020601874,0.00008003987,0.002029142,0.00008970506],"about_ca_topic_score_codex":0.00079217704,"about_ca_topic_score_gemma":0.0007067187,"teacher_disagreement_score":0.00079217704,"about_ca_system_score_codex":0.00023052539,"about_ca_system_score_gemma":0.00024195426,"threshold_uncertainty_score":0.002524078},"labels":[],"label_agreement":null},{"id":"W2025773950","doi":"10.1159/000128108","title":"Intravascular Hemolysis and Ultrastructural Changes of Erythrocytes in Lethal Canine Endotoxin Shock","year":2008,"lang":"en","type":"article","venue":"European Surgical Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Disseminated intravascular coagulation; Fibrin; Hemolysis; Shock (circulatory); Ultrastructure; Platelet; Fibrinolysis; Pathology; Chemistry; Medicine; Immunology; Internal medicine","score_opus":0.04647946549910284,"score_gpt":0.2985115088555342,"score_spread":0.25203204335643137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025773950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984403,0.0008617979,0.00036890974,0.000009900387,0.0000041184694,0.00000554466,0.000060673603,0.000007097073,0.00024160628],"genre_scores_gemma":[0.99825615,0.000646256,0.00046768223,0.000019994155,0.0000057883954,0.000011279818,0.00019316093,0.000003982398,0.0003957184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999199,0.00001644386,0.000009905796,0.000013218837,0.00002088248,0.000019702264],"domain_scores_gemma":[0.9998722,0.000015502745,0.000050014845,0.000011213397,0.000022029408,0.000028969129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019232064,0.00013776598,0.00017206435,0.00031108464,0.00011887103,0.00017280258,0.000104920386,0.0003156827,0.00039418158],"category_scores_gemma":[0.0001819102,0.00013504439,0.00012109882,0.00013286027,0.00026639938,0.00024031568,0.00015630365,0.0002382644,0.00015084131],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016948225,0.000044661483,0.011006209,0.000092686554,0.000020205633,0.0010807724,0.00021721717,0.00008736574,0.98227596,0.00011369686,0.00004356445,0.003322809],"study_design_scores_gemma":[0.000110150875,0.002996011,0.60060567,0.000027887818,0.00014549028,0.008273502,0.00058009464,0.0013262205,0.3828863,0.0002817353,0.0027324439,0.00003460189],"about_ca_topic_score_codex":0.00026992892,"about_ca_topic_score_gemma":0.00033786328,"teacher_disagreement_score":0.00039418158,"about_ca_system_score_codex":0.00014860704,"about_ca_system_score_gemma":0.0000815915,"threshold_uncertainty_score":0.0013186932},"labels":[],"label_agreement":null},{"id":"W2025815720","doi":"10.1111/jcmm.12294","title":"A novel <scp>TLR</scp>2‐triggered signalling crosstalk synergistically intensifies <scp>TNF</scp>‐mediated <scp>IL</scp>‐6 induction","year":2014,"lang":"en","type":"article","venue":"Journal of Cellular and Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"University of Toronto; Academia Sinica; Yen Tjing Ling Medical Foundation; National Science Council","keywords":"Crosstalk; Tumor necrosis factor alpha; Receptor; Inflammation; Cell biology; Cytokine; Signal transducing adaptor protein; Signal transduction; Toll-like receptor; Immunology; Biology; Innate immune system; Immune system","score_opus":0.01050918015107649,"score_gpt":0.2215704065296481,"score_spread":0.2110612263785716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2025815720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98426026,0.0018275104,0.010354652,0.00028414585,0.00007969853,0.00005180907,0.00032749274,0.00014006511,0.0026744925],"genre_scores_gemma":[0.9928294,0.00074526196,0.004128297,0.00013119187,0.000036610632,0.00004323094,0.00027710912,0.000010947852,0.0017980781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998549,0.000026167228,0.00000792803,0.000030951083,0.000039100396,0.00004091048],"domain_scores_gemma":[0.9999422,0.000008839884,0.000016869566,0.0000063838675,0.0000067891337,0.000018829374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012677294,0.00045522477,0.00024463717,0.00016156059,0.00016824782,0.00031853875,0.00014388908,0.00038289078,0.0022110466],"category_scores_gemma":[0.00007394024,0.00010832511,0.00028831797,0.00011833112,0.00022113032,0.00030350595,0.00032370858,0.00061736774,0.00043991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001418188,0.00001683802,0.00007803706,0.000029145225,0.0000031694717,0.00012645326,0.0000043839354,0.00004376932,0.99874747,0.0000924084,0.00003661831,0.0006798655],"study_design_scores_gemma":[0.000029081102,0.00033074626,0.0021124322,0.0000051080774,0.000015606007,0.0007507024,0.000020591091,0.0009449638,0.9934784,0.00012506176,0.0021818536,0.0000053710555],"about_ca_topic_score_codex":0.000084758816,"about_ca_topic_score_gemma":0.0002093393,"teacher_disagreement_score":0.0022110466,"about_ca_system_score_codex":0.00020568083,"about_ca_system_score_gemma":0.00021359144,"threshold_uncertainty_score":0.0073966384},"labels":[],"label_agreement":null},{"id":"W202606169","doi":"10.4049/jimmunol.190.supp.138.15","title":"Toll-like receptor 10: its expression and role in chemotaxis in human neutrophils (P1234)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Cell biology; Biology; Chemotaxis; TLR4; Gene silencing; Receptor; Signal transduction; Biochemistry; Gene","score_opus":0.006986004037633596,"score_gpt":0.2178563051656042,"score_spread":0.2108703011279706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W202606169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98504156,0.006871554,0.0029789861,0.0004954599,0.00009470575,0.00008933374,0.0011605545,0.00007793567,0.00318983],"genre_scores_gemma":[0.9860888,0.0019042037,0.0030974874,0.00012070582,0.00002617818,0.00014084658,0.0016135742,0.000010599248,0.0069975494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991095,0.000021502268,0.000006501113,0.000017298216,0.000015762693,0.000027985923],"domain_scores_gemma":[0.9999604,0.0000052814867,0.000008221185,0.0000029085504,0.000008554838,0.000014598446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015810707,0.0002863737,0.00013734862,0.00023645867,0.00016993235,0.000228189,0.00013597746,0.00036961888,0.0039046134],"category_scores_gemma":[0.000100998965,0.00012384192,0.00017977395,0.00015237104,0.00015880071,0.00012838775,0.00016477577,0.00035026507,0.0010850587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054073485,0.00004797576,0.0011173666,0.00009437753,0.000004494122,0.00029473144,0.000026070193,0.00003335214,0.9934196,0.00012247103,0.00026002893,0.0040387684],"study_design_scores_gemma":[0.00025952453,0.001737613,0.084015675,0.00006255895,0.000053911703,0.0055721374,0.0002609722,0.0022501235,0.8838296,0.00032931106,0.021604901,0.000023748187],"about_ca_topic_score_codex":0.0008811195,"about_ca_topic_score_gemma":0.00062065263,"teacher_disagreement_score":0.0039046134,"about_ca_system_score_codex":0.0002917161,"about_ca_system_score_gemma":0.00022276059,"threshold_uncertainty_score":0.013062239},"labels":[],"label_agreement":null},{"id":"W2027123878","doi":"10.1016/j.jri.2009.09.008","title":"Expression and function of Toll-like receptors in human endometrial epithelial cell lines","year":2009,"lang":"en","type":"article","venue":"Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"TLR5; TLR2; Innate immune system; Flagellin; Biology; Toll-like receptor; Receptor; TLR3; Cell culture; Cell biology; Immune system; TLR9; TLR7; Immunology; Gene expression; Gene; Genetics","score_opus":0.009949219360345684,"score_gpt":0.24330093037059702,"score_spread":0.23335171101025134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027123878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9767869,0.005764658,0.008727485,0.00029646012,0.00009987744,0.00018883026,0.0041764425,0.00009426017,0.003865015],"genre_scores_gemma":[0.9696378,0.004367516,0.009812368,0.00022999845,0.000038858383,0.00030263676,0.008890638,0.000032208158,0.006688012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933213,0.0001816036,0.00014079512,0.00007775156,0.00014361972,0.00012403684],"domain_scores_gemma":[0.9994586,0.00022421773,0.000035444336,0.00013039497,0.000116944735,0.00003438759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079899107,0.00025806768,0.00037100769,0.000632258,0.00039268512,0.00062752113,0.000323799,0.00039380282,0.0024675473],"category_scores_gemma":[0.00068231527,0.00029338317,0.00044530054,0.00066377164,0.00029200438,0.00034593174,0.00027566624,0.0007347388,0.0010579041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079846464,0.00021358211,0.0026167943,0.00023833895,0.00004746271,0.0003609984,0.00041144967,0.0003172797,0.98904014,0.0008263943,0.0005141375,0.004614969],"study_design_scores_gemma":[0.00015500418,0.0013723046,0.021039527,0.000051343308,0.00016546075,0.0019463839,0.00066207786,0.002972563,0.9544307,0.00022741483,0.01694158,0.000035703662],"about_ca_topic_score_codex":0.0014858716,"about_ca_topic_score_gemma":0.0011920524,"teacher_disagreement_score":0.0024675473,"about_ca_system_score_codex":0.00032529252,"about_ca_system_score_gemma":0.00027546106,"threshold_uncertainty_score":0.008254766},"labels":[],"label_agreement":null},{"id":"W2027216673","doi":"10.1016/j.biomaterials.2005.04.063","title":"Endotoxin: The uninvited guest","year":2005,"lang":"en","type":"article","venue":"Biomaterials","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":412,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McMaster University","funders":"","keywords":"Biomaterial; Biocompatibility; Materials science; Biocompatible material; Materials testing; Biomedical engineering; Biological safety; Biological materials; Biochemical engineering; Nanotechnology; Medicine; Engineering; Composite material","score_opus":0.010597326170795555,"score_gpt":0.22674778680528768,"score_spread":0.21615046063449211,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027216673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64634466,0.14629546,0.039612874,0.02087384,0.034510132,0.00013730158,0.00038780784,0.0008708401,0.11096712],"genre_scores_gemma":[0.8650982,0.029571142,0.007640396,0.0026641102,0.00343448,0.00004281141,0.00022836465,0.00017376844,0.091146804],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99958676,0.000109458706,0.000021001164,0.00007192559,0.00012836132,0.00008254281],"domain_scores_gemma":[0.99980694,0.000027415848,0.000034261964,0.000039316506,0.000026371523,0.0000658545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045886525,0.0007302138,0.00051073404,0.00035339463,0.0004757049,0.0020551328,0.00036815117,0.0010445531,0.0062239342],"category_scores_gemma":[0.00039328678,0.00017131963,0.00024158428,0.00019352107,0.001216173,0.0012509259,0.0012600212,0.0015890389,0.0020848934],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018901312,0.0003968052,0.001970633,0.00070292526,0.000048842867,0.0028087262,0.00035796574,0.0002684839,0.76884836,0.059722543,0.012914442,0.15007013],"study_design_scores_gemma":[0.00007639957,0.0021659303,0.0049949056,0.0003336595,0.00010001464,0.009366167,0.00081188395,0.0013781653,0.67857164,0.019322379,0.2828107,0.000068205096],"about_ca_topic_score_codex":0.000100173034,"about_ca_topic_score_gemma":0.0000998304,"teacher_disagreement_score":0.0062239342,"about_ca_system_score_codex":0.0003137971,"about_ca_system_score_gemma":0.00037807933,"threshold_uncertainty_score":0.020821154},"labels":[],"label_agreement":null},{"id":"W2027224467","doi":"10.1016/s0022-1759(99)00188-x","title":"Quantitation of porcine cytokine and beta 2-microglobulin mRNA expression by reverse transcription polymerase chain reaction","year":2000,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Molecular biology; Housekeeping gene; Beta-2 microglobulin; Messenger RNA; Biology; Cytokine; Reverse transcription polymerase chain reaction; BETA (programming language); Real-time polymerase chain reaction; Gene expression; Polymerase chain reaction; Reverse transcriptase; Chemistry; Gene; Immunology; Biochemistry","score_opus":0.018704087382894658,"score_gpt":0.30684088021137723,"score_spread":0.2881367928284826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027224467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48789194,0.0062558316,0.4770666,0.0007691491,0.0017451172,0.0035245041,0.007879141,0.0019700378,0.012897607],"genre_scores_gemma":[0.38507444,0.0068736007,0.5483122,0.0015215046,0.00081452075,0.010848538,0.02184577,0.0009128862,0.023796527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984126,0.00028900604,0.00020681175,0.00048619285,0.000257555,0.00034772625],"domain_scores_gemma":[0.99844307,0.00089544704,0.000120748125,0.00019960509,0.00025168853,0.000089456145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014309147,0.0026059563,0.0015618905,0.001331592,0.00091118837,0.0014032037,0.0009274707,0.0013634319,0.0040665786],"category_scores_gemma":[0.00086340215,0.0012077373,0.0015584083,0.0010800199,0.001617496,0.00088701013,0.0006023889,0.0036402505,0.002408843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020878107,0.000058870537,0.00014163552,0.00009760793,0.000010350835,0.00004824636,0.000050304818,0.00008978885,0.9976974,0.00017561573,0.000045542194,0.0013758554],"study_design_scores_gemma":[0.00009981842,0.0011204759,0.0024102153,0.00006114184,0.00009367062,0.00023221251,0.0000749929,0.0019767433,0.98887616,0.00037973232,0.0046442524,0.000030452913],"about_ca_topic_score_codex":0.0008473328,"about_ca_topic_score_gemma":0.0012627183,"teacher_disagreement_score":0.0040665786,"about_ca_system_score_codex":0.0006812704,"about_ca_system_score_gemma":0.0010291209,"threshold_uncertainty_score":0.0136041045},"labels":[],"label_agreement":null},{"id":"W2027322809","doi":"10.1016/s0264-410x(99)00526-5","title":"CpG DNA induces stronger immune responses with less toxicity than other adjuvants","year":2000,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":262,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"Medical Research Council","keywords":"Adjuvant; Alum; Immune system; CpG site; Immunology; Antigen; Antibody; Biology; CpG Oligodeoxynucleotide; Lipid A; Chemistry; Lipopolysaccharide; DNA methylation; Biochemistry; Gene","score_opus":0.013242740947679627,"score_gpt":0.23366043966922154,"score_spread":0.2204176987215419,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027322809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98397833,0.0027497506,0.0085369535,0.0003023337,0.00031755812,0.00013312968,0.00020531642,0.00016650656,0.0036101246],"genre_scores_gemma":[0.9855715,0.0015546842,0.0056954394,0.00039815917,0.00013913053,0.000093164315,0.000450859,0.000047901256,0.0060491567],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996424,0.00010705874,0.000022837943,0.000045404555,0.00009818679,0.000084140825],"domain_scores_gemma":[0.99957424,0.00017444805,0.0000609284,0.000051137402,0.00006231846,0.0000769859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053718855,0.00075526634,0.00044714235,0.00051289744,0.000117663105,0.00028742763,0.00014522584,0.00058940257,0.0030959197],"category_scores_gemma":[0.0004842436,0.00016665866,0.00026570613,0.00025562546,0.00029422238,0.0004059447,0.00032263302,0.0010742218,0.00056044734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003651442,0.00017217203,0.00015638812,0.00010591069,0.000010711309,0.000023264804,0.000009083646,0.00014718708,0.99360114,0.00011248563,0.00007177418,0.0052247904],"study_design_scores_gemma":[0.00009730408,0.003411438,0.001810687,0.000020210684,0.00004435248,0.00022365504,0.000027619515,0.00040759597,0.99151456,0.00015928439,0.0022766292,0.000006640946],"about_ca_topic_score_codex":0.00020099305,"about_ca_topic_score_gemma":0.00039143235,"teacher_disagreement_score":0.0030959197,"about_ca_system_score_codex":0.00017728694,"about_ca_system_score_gemma":0.00036311362,"threshold_uncertainty_score":0.010356903},"labels":[],"label_agreement":null},{"id":"W2027404973","doi":"10.1016/j.vetimm.2005.05.008","title":"Toll-like receptor, MHC II, B7 and cytokine expression by porcine monocytes and monocyte-derived dendritic cells in response to microbial pathogen-associated molecular patterns","year":2005,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Lipoteichoic acid; Toll-like receptor; Immune system; Cytokine; Monocyte; Pathogen-associated molecular pattern; CpG Oligodeoxynucleotide; Immunology; TLR9; Interleukin 10; Major histocompatibility complex; Cell biology; Innate immune system; Pattern recognition receptor; Gene expression; Staphylococcus aureus; Gene; Biochemistry; Bacteria","score_opus":0.007561487626143621,"score_gpt":0.22439127990216834,"score_spread":0.21682979227602472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027404973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975011,0.00095312,0.00028573553,0.00006314589,0.000040029485,0.000016215305,0.00024177272,0.0000041004932,0.0008948318],"genre_scores_gemma":[0.99585164,0.0008133361,0.00041384657,0.0001338671,0.00004924005,0.00006719196,0.0005552973,0.0000072576872,0.0021082726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971193,0.00005601717,0.000022167213,0.000038701066,0.000030501,0.00014068566],"domain_scores_gemma":[0.99979526,0.00006646796,0.000027381819,0.000014027476,0.000022871756,0.00007397747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020152247,0.00022353484,0.0003076548,0.0002967287,0.00026327546,0.0006374643,0.00014652137,0.0005148607,0.0014540338],"category_scores_gemma":[0.0003209809,0.00030810593,0.0003687768,0.00023683006,0.00030311092,0.0003631448,0.00027215615,0.000735062,0.00049804285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028549556,0.000057754274,0.0033205494,0.00008776217,0.0000102784525,0.00036690288,0.00016555059,0.00007051458,0.9911601,0.0001154869,0.00008811205,0.0017020176],"study_design_scores_gemma":[0.00066342554,0.0040801293,0.45312035,0.00010659174,0.00018287318,0.0022192302,0.0029312551,0.0034134071,0.5271218,0.0010675273,0.0050194925,0.000073975534],"about_ca_topic_score_codex":0.0008091327,"about_ca_topic_score_gemma":0.0011599743,"teacher_disagreement_score":0.0014540338,"about_ca_system_score_codex":0.00031195278,"about_ca_system_score_gemma":0.00023259102,"threshold_uncertainty_score":0.004864216},"labels":[],"label_agreement":null},{"id":"W2027575368","doi":"10.1371/journal.ppat.0020004","title":"Modulation of Tumor Necrosis Factor by Microbial Pathogens","year":2006,"lang":"en","type":"review","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":204,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Robarts Clinical Trials","funders":"","keywords":"Tumor necrosis factor alpha; Proinflammatory cytokine; Biology; Immune system; Innate immune system; Signal transduction; Cytokine; Immunology; Cell biology; Receptor; Pattern recognition receptor; Inflammation; Genetics","score_opus":0.027710492409604572,"score_gpt":0.25787941739609305,"score_spread":0.23016892498648847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027575368","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00056673144,0.9965342,0.00024881546,0.00013127143,0.00026176844,0.0000046134624,0.00001376271,0.000011849803,0.0022268733],"genre_scores_gemma":[0.0035576848,0.99347633,0.0003132054,0.00017157348,0.00021150925,0.000010249454,0.00003631686,0.0000022708386,0.0022207687],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998822,0.000015741254,0.000013608727,0.00002264638,0.000053550153,0.000012235952],"domain_scores_gemma":[0.99991274,0.0000265706,0.000017305558,0.000004739489,0.000025995496,0.00001261719],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028151157,0.00064709136,0.00082469196,0.0010242693,0.00019303804,0.00058738847,0.0005787825,0.0006977936,0.0017859975],"category_scores_gemma":[0.00027236255,0.00016058379,0.0002163513,0.0008686532,0.000290261,0.00068393373,0.00036033095,0.00074872014,0.0029030694],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017959284,0.000077384146,0.00030132153,0.008577716,0.000054406115,0.0007084809,0.00006926259,0.00039587577,0.02180938,0.0039082346,0.020532958,0.9433855],"study_design_scores_gemma":[0.000028516035,0.00011941661,0.0008751233,0.0008607054,0.000039251005,0.003054058,0.000038658174,0.000097441574,0.0069823763,0.0014968853,0.986394,0.0000135144],"about_ca_topic_score_codex":0.00046373872,"about_ca_topic_score_gemma":0.00063604297,"teacher_disagreement_score":0.0017859975,"about_ca_system_score_codex":0.00047577315,"about_ca_system_score_gemma":0.00039715823,"threshold_uncertainty_score":0.0059747696},"labels":[],"label_agreement":null},{"id":"W2027625918","doi":"10.1016/j.bbagen.2013.02.002","title":"Bacterial membrane disrupting dodecapeptide SC4 improves survival of mice challenged with Pseudomonas aeruginosa","year":2013,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - General Subjects","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Networks of Centres of Excellence of Canada; National Institutes of Health","keywords":"Pseudomonas aeruginosa; In vivo; Medicine; Bacteremia; Antibiotics; Microbiology; Biology; Bacteria; Genetics","score_opus":0.010050579798253485,"score_gpt":0.2217462680471769,"score_spread":0.2116956882489234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027625918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984682,0.00057498156,0.00027388788,0.000094963885,0.000041137424,0.000011431056,0.00014839311,0.000039428665,0.00034739773],"genre_scores_gemma":[0.99467385,0.0009154432,0.0006696574,0.00008913748,0.000026367792,0.00002977815,0.00041004806,0.00001701235,0.003168636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989235,0.00001600485,0.0000071317154,0.000015722195,0.000020168876,0.00004860141],"domain_scores_gemma":[0.999777,0.000022686105,0.000054842527,0.000016429178,0.000028378056,0.00010070629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013246886,0.00056557235,0.00046407318,0.00034610706,0.00016281758,0.0003019071,0.00028801573,0.00050234294,0.0015280762],"category_scores_gemma":[0.00016974514,0.00016286912,0.00022841278,0.0001429703,0.0003146149,0.0003166847,0.0001586415,0.00088362873,0.00036478232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024900269,0.00026662587,0.00022195908,0.000038785198,0.000008890334,0.000037548587,0.000015287376,0.000054458083,0.99474466,0.000031067804,0.000070694856,0.0020199749],"study_design_scores_gemma":[0.00025515837,0.011698748,0.008002186,0.000019735895,0.000066675006,0.0001961482,0.00009702691,0.00061868964,0.9772052,0.00008891343,0.0017381872,0.000013457684],"about_ca_topic_score_codex":0.0008950961,"about_ca_topic_score_gemma":0.0009275255,"teacher_disagreement_score":0.0015280762,"about_ca_system_score_codex":0.00023202067,"about_ca_system_score_gemma":0.0004051796,"threshold_uncertainty_score":0.0051119328},"labels":[],"label_agreement":null},{"id":"W2027748180","doi":"10.1002/eji.201040827","title":"Essential role of Rip2 in the modulation of innate and adaptive immunity triggered by Nod1 and Nod2 ligands","year":2011,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Fondation Bettencourt Schueller; Canadian Association of Gastroenterology","keywords":"Muramyl dipeptide; NOD1; Biology; NOD2; Innate immune system; Acquired immune system; Nod; Cell biology; Immunology; Pattern recognition receptor; Inflammasome; Immune system; Microbiology; Inflammation; In vivo","score_opus":0.010479185299920347,"score_gpt":0.19469775779710144,"score_spread":0.1842185724971811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027748180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805233,0.010672435,0.004367504,0.000245713,0.00006494666,0.00004383749,0.00058722135,0.00010610843,0.0033889331],"genre_scores_gemma":[0.99322754,0.0015431785,0.0024852136,0.00008593715,0.000034379336,0.000052808242,0.0007159087,0.00002449344,0.0018306458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997143,0.000108712054,0.000031849828,0.000043059623,0.0000393842,0.00006272419],"domain_scores_gemma":[0.99984014,0.00002726355,0.000034152807,0.000026087706,0.000019562058,0.00005267033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038842158,0.0005008863,0.0003371514,0.00020741644,0.00017713876,0.00046068494,0.00022309898,0.00032737324,0.0012637187],"category_scores_gemma":[0.0002620224,0.00016005045,0.00024654434,0.00012165854,0.00025999823,0.00047160013,0.0003938186,0.0004791314,0.00071009493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042604737,0.000020652378,0.0001772517,0.00006632324,0.0000044622434,0.00017109924,0.000008252954,0.00008676604,0.997919,0.0001461336,0.000048977156,0.0009250574],"study_design_scores_gemma":[0.000109753135,0.00045126287,0.013319012,0.000024051875,0.00003903126,0.0020806908,0.0000732378,0.0025566197,0.9750334,0.00042021106,0.0058742138,0.00001856767],"about_ca_topic_score_codex":0.000082228,"about_ca_topic_score_gemma":0.000094274816,"teacher_disagreement_score":0.0012637187,"about_ca_system_score_codex":0.0001804747,"about_ca_system_score_gemma":0.00019582867,"threshold_uncertainty_score":0.004227519},"labels":[],"label_agreement":null},{"id":"W2027936811","doi":"10.1099/vir.0.81444-0","title":"Role of non-raft cholesterol in lymphocytic choriomeningitis virus infection via α-dystroglycan","year":2006,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Lymphocytic choriomeningitis; Biology; Virology; Raft; Virus; Immunology; Immune system","score_opus":0.003174149167652749,"score_gpt":0.21118989104478836,"score_spread":0.20801574187713562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027936811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935958,0.00450659,0.0004893651,0.000090927024,0.0000120603045,0.000015892889,0.000071605806,0.000017861803,0.0012000198],"genre_scores_gemma":[0.9964547,0.0018061202,0.000522771,0.00003175273,0.000006092938,0.000012539355,0.00008444388,0.0000046740197,0.0010769275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999007,0.000023515147,0.000007696447,0.000012899573,0.000021833286,0.00003332218],"domain_scores_gemma":[0.9998996,0.000021358757,0.000023014558,0.000010299876,0.000017691757,0.000028005548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013085325,0.000305519,0.00021611359,0.00022312853,0.0003124195,0.00045667292,0.00013578104,0.0003124391,0.00058456685],"category_scores_gemma":[0.00016529336,0.00012139027,0.00018145649,0.00008556489,0.00033850988,0.00028891422,0.00023753154,0.0002958544,0.00023561966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019805891,0.00001825968,0.00046186225,0.000040355164,0.000003983212,0.00016128462,0.000025073707,0.00005373558,0.9976292,0.00016002158,0.000016640633,0.001231615],"study_design_scores_gemma":[0.0000338569,0.00023560387,0.012343448,0.000015232699,0.00002201277,0.0005364255,0.00009614471,0.0010471378,0.98368996,0.00020783007,0.0017645941,0.000007667207],"about_ca_topic_score_codex":0.0011144031,"about_ca_topic_score_gemma":0.0014815927,"teacher_disagreement_score":0.0011144031,"about_ca_system_score_codex":0.00047182944,"about_ca_system_score_gemma":0.00028644688,"threshold_uncertainty_score":0.0034233928},"labels":[],"label_agreement":null},{"id":"W2028348061","doi":"10.1191/0960327103ht403oa","title":"Mechanisms involved in methylmercuric chloride (MeHgCl)-induced suppression of human neutrophil apoptosis","year":2003,"lang":"en","type":"article","venue":"Human & Experimental Toxicology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Institut National de la Recherche Scientifique","funders":"","keywords":"Apoptosis; Annexin; Chemistry; CD16; Cell biology; Molecular biology; Flow cytometry; Vimentin; Annexin A5; Biology; Biochemistry; Immunology; Antigen; CD8","score_opus":0.0317556111356583,"score_gpt":0.2999339920415153,"score_spread":0.268178380905857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028348061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98076725,0.014414081,0.0028498513,0.00029028006,0.000026765008,0.00007513486,0.00016796564,0.00010002273,0.0013086637],"genre_scores_gemma":[0.99591774,0.0020725194,0.0009992684,0.000091899106,0.000011809237,0.000036015368,0.00008794022,0.0000046760742,0.0007781248],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998357,0.000058325117,0.000014498318,0.000018993993,0.000035668152,0.00003670015],"domain_scores_gemma":[0.99989486,0.000022176726,0.000043885055,0.000011194119,0.000018756027,0.0000092242035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016285438,0.00025265434,0.0002241854,0.00018291255,0.000114720846,0.0001846132,0.00015755356,0.00036432064,0.00064345624],"category_scores_gemma":[0.00017609951,0.00012004395,0.00023061092,0.00008316698,0.00022095433,0.00014809737,0.00019475464,0.000229872,0.00019638946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017556167,0.000015532936,0.00031591704,0.000112428184,0.000006980142,0.00012227135,0.000026376316,0.00006877718,0.9966298,0.00007174375,0.000027102658,0.0024274485],"study_design_scores_gemma":[0.000034025303,0.00052000355,0.0069307764,0.000013579542,0.000014635146,0.0006025834,0.000035313093,0.00032945714,0.98954016,0.00009006273,0.0018858453,0.000003663612],"about_ca_topic_score_codex":0.00037734298,"about_ca_topic_score_gemma":0.0006393605,"teacher_disagreement_score":0.00064345624,"about_ca_system_score_codex":0.0003044066,"about_ca_system_score_gemma":0.00015304623,"threshold_uncertainty_score":0.0022085905},"labels":[],"label_agreement":null},{"id":"W2028563834","doi":"10.1038/cdd.2009.3","title":"Getting away from it all in Capri: the 2008 EMBO workshop on NF-κB","year":2009,"lang":"en","type":"article","venue":"Cell Death and Differentiation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Consiglio Nazionale delle Ricerche; Institute of Genetics; Cancer Research UK","keywords":"Globe; Political science; Biology; Neuroscience","score_opus":0.01839575591473931,"score_gpt":0.2381702484643365,"score_spread":0.2197744925495972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028563834","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0039962735,0.3610133,0.0046081366,0.304377,0.3116151,0.000101932754,0.0003085665,0.0002602604,0.013719398],"genre_scores_gemma":[0.059012603,0.19785133,0.007470832,0.1671739,0.3962367,0.00034147323,0.00092589715,0.0006167146,0.1703706],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988563,0.00021114005,0.000052375337,0.00022114861,0.0003438701,0.0003150917],"domain_scores_gemma":[0.9966037,0.00027465404,0.00012575442,0.00010804481,0.0006695255,0.002218272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0056849555,0.0015637275,0.001557459,0.001177667,0.0025394328,0.007656598,0.0017120496,0.0065680067,0.011692304],"category_scores_gemma":[0.0025256672,0.0006838574,0.0010136478,0.00081787317,0.002971602,0.006202538,0.006537763,0.01711133,0.003926151],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059974816,0.00007537259,0.00026803676,0.0006870116,0.000052064774,0.0003695858,0.0005818322,0.00017004828,0.006810415,0.008191048,0.89287907,0.08931579],"study_design_scores_gemma":[0.000037158814,0.000052959535,0.00043144068,0.00036656324,0.000026088424,0.00019745147,0.0003541253,0.00009937075,0.001616705,0.0045273625,0.99225605,0.00003483006],"about_ca_topic_score_codex":0.0013308376,"about_ca_topic_score_gemma":0.00576897,"teacher_disagreement_score":0.011692304,"about_ca_system_score_codex":0.0037382124,"about_ca_system_score_gemma":0.0033039371,"threshold_uncertainty_score":0.039114714},"labels":[],"label_agreement":null},{"id":"W2028747797","doi":"10.1074/jbc.m110.205724","title":"Down-regulation of Cytokine-induced Interleukin-8 Requires Inhibition of p38 Mitogen-activated Protein Kinase (MAPK) via MAPK Phosphatase 1-dependent and -independent Mechanisms","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Children's Hospital; McGill University; McGill University Health Centre","funders":"","keywords":"MAPK/ERK pathway; p38 mitogen-activated protein kinases; Cytokine; Tumor necrosis factor alpha; Protein kinase A; Dexamethasone; Kinase; Biology; Chemistry; Cell biology; Cancer research; Endocrinology; Immunology","score_opus":0.023584863633906782,"score_gpt":0.22711955810570245,"score_spread":0.20353469447179567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028747797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881991,0.004587644,0.005012421,0.000179988,0.000062775056,0.00007635968,0.00033289238,0.00010125947,0.0014475627],"genre_scores_gemma":[0.9914688,0.0025443346,0.0037208665,0.000055668403,0.000021010466,0.00011354156,0.00033524702,0.000013577647,0.0017269287],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998267,0.000022742688,0.000018281811,0.000038992795,0.00004865382,0.00004475827],"domain_scores_gemma":[0.99994195,0.00001209869,0.000021984079,0.0000064896126,0.000008111978,0.000009439467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001621163,0.00045939462,0.00025469856,0.00013933855,0.0001655091,0.0002521396,0.00016345785,0.00020202347,0.0010264404],"category_scores_gemma":[0.000097004806,0.00011433948,0.00036658486,0.00011358043,0.00023676052,0.0002396615,0.0001715192,0.00059534464,0.00032356387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006502862,0.000025732234,0.000052679556,0.00004495577,0.0000023651075,0.000025135954,0.000009989613,0.000024479705,0.99903166,0.00004428299,0.000013724341,0.0006599685],"study_design_scores_gemma":[0.000018147775,0.00028937668,0.0018983752,0.000005658085,0.000010793296,0.00015084895,0.000021879356,0.00036850077,0.99558675,0.00004332757,0.0016030063,0.000003336459],"about_ca_topic_score_codex":0.00016359225,"about_ca_topic_score_gemma":0.00029869,"teacher_disagreement_score":0.0010264404,"about_ca_system_score_codex":0.00017207272,"about_ca_system_score_gemma":0.00017767583,"threshold_uncertainty_score":0.0034338236},"labels":[],"label_agreement":null},{"id":"W2029227990","doi":"10.1152/ajpregu.00398.2006","title":"Neonatal immune challenge exacerbates experimental colitis in adult rats: potential role for TNF-α","year":2006,"lang":"en","type":"article","venue":"American Journal of Physiology-Regulatory, Integrative and Comparative Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Corticosterone; Internal medicine; Medicine; Immune system; Colitis; Endocrinology; Proinflammatory cytokine; Tumor necrosis factor alpha; Inflammatory bowel disease; Cytokine; Inflammation; Saline; Immunology; Disease; Hormone","score_opus":0.008217744896636523,"score_gpt":0.24940595322059253,"score_spread":0.24118820832395602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029227990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99728334,0.0014994734,0.0005056653,0.00008725577,0.000038046437,0.000021345617,0.00016976366,0.000032684144,0.00036244027],"genre_scores_gemma":[0.9956868,0.0015444192,0.0009691009,0.000106967665,0.000035200024,0.000079605794,0.00027889883,0.000011364566,0.0012875653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998097,0.000032417516,0.00002116632,0.000042400454,0.000043782115,0.000050623777],"domain_scores_gemma":[0.99935406,0.00004851464,0.00028996184,0.000051592866,0.000053365755,0.00020254766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024153154,0.00056155876,0.0004888172,0.0003036246,0.00013874589,0.00027364417,0.00019532537,0.00036931314,0.0013330386],"category_scores_gemma":[0.00029071324,0.00017735288,0.00028777227,0.00013039811,0.00046313455,0.00030296994,0.00024214624,0.001205484,0.00021037477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019835767,0.00024273303,0.002250766,0.00012317217,0.000014128366,0.00023839848,0.000059193415,0.000031049953,0.99293363,0.000030542105,0.00004050326,0.0020523872],"study_design_scores_gemma":[0.00012562449,0.013168228,0.16434526,0.00009215318,0.00012642385,0.0012595138,0.0005166198,0.0006035337,0.8180088,0.00012848749,0.0016006709,0.000024811234],"about_ca_topic_score_codex":0.00042653523,"about_ca_topic_score_gemma":0.0013699874,"teacher_disagreement_score":0.0013330386,"about_ca_system_score_codex":0.00028040528,"about_ca_system_score_gemma":0.00029608695,"threshold_uncertainty_score":0.0044594407},"labels":[],"label_agreement":null},{"id":"W2029376832","doi":"10.1002/eji.200323821","title":"Cooperation between toll‐like receptor 2 and 4 in the brain of mice challenged with cell wall components derived from gram‐negative and gram‐positive bacteria","year":2003,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Medical Research Council; Canadian Institutes of Health Research; Medical Research Council Canada; McGill University; Texas Tech University","keywords":"TLR2; TLR4; Innate immune system; Biology; Lipopolysaccharide; Toll-like receptor; CD14; Peptidoglycan; Receptor; Immunology; Tumor necrosis factor alpha; Immune system; Cell biology; Microbiology; Gene; Biochemistry","score_opus":0.01165763586864049,"score_gpt":0.19943443186851886,"score_spread":0.18777679599987837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029376832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99666935,0.0012645422,0.0011265068,0.0001806958,0.00003032708,0.000021705913,0.00018323056,0.000052741623,0.00047083473],"genre_scores_gemma":[0.98990965,0.0016122523,0.0028798655,0.00025567244,0.00004846596,0.00019922256,0.0006222064,0.000034389905,0.0044382503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997427,0.000046055633,0.0000145905215,0.00006376951,0.00004835836,0.000084518346],"domain_scores_gemma":[0.99975055,0.000017130858,0.0000950097,0.000019516536,0.000026686908,0.00009114306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028218093,0.0011871074,0.0004978172,0.000774648,0.00026869666,0.00044831348,0.00025011066,0.0006894075,0.0013657166],"category_scores_gemma":[0.00017521266,0.0004326981,0.00043786876,0.00010690173,0.00051162526,0.00043644485,0.00030923184,0.0011824437,0.00040689568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086911395,0.00007012622,0.0006160773,0.000040790783,0.000010953237,0.00019233019,0.000034146426,0.000030614934,0.99726236,0.000055973036,0.000042095257,0.0007753021],"study_design_scores_gemma":[0.0003313392,0.004646871,0.057164498,0.00006237405,0.00019432968,0.0024683792,0.000431406,0.0015227722,0.9295392,0.0007394686,0.0028505768,0.000048754897],"about_ca_topic_score_codex":0.0004102038,"about_ca_topic_score_gemma":0.00057614234,"teacher_disagreement_score":0.0013657166,"about_ca_system_score_codex":0.0003867591,"about_ca_system_score_gemma":0.0003541312,"threshold_uncertainty_score":0.004568815},"labels":[],"label_agreement":null},{"id":"W2029955127","doi":"10.1002/eji.200737069","title":"Nod1 and Nod2 induce CCL5/RANTES through the NF‐κB pathway","year":2007,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Austrian Science Fund; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"NOD1; CCL5; Chemokine; NOD2; CXCL2; Biology; Nod; Innate immune system; Cell biology; Immune system; Immunology; Chemokine receptor; T cell; In vivo; IL-2 receptor","score_opus":0.012408861473589883,"score_gpt":0.22227414406457763,"score_spread":0.20986528259098775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2029955127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846383,0.0056908415,0.0045957617,0.00024750613,0.00007607605,0.00005398238,0.0003221688,0.00013909851,0.0042362595],"genre_scores_gemma":[0.9909802,0.001107107,0.0029396524,0.00011634004,0.000024679985,0.000093630755,0.0005408574,0.000015158204,0.0041824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956566,0.00014321145,0.000040868978,0.00005105894,0.000080041835,0.00011914887],"domain_scores_gemma":[0.99977773,0.000037989274,0.000076839315,0.000026052887,0.0000213241,0.000059989023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044088546,0.0006698393,0.00022363801,0.00026056153,0.00014535649,0.00033987386,0.0001302074,0.00025252983,0.0015374647],"category_scores_gemma":[0.00023495319,0.00013222871,0.00037415643,0.00009844482,0.00031032693,0.00025781657,0.00042158554,0.00045892142,0.00047952164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035764606,0.00005858485,0.00033732486,0.000099520366,0.0000083086625,0.00019012815,0.00002190083,0.0000756155,0.99688524,0.0001849264,0.00006634989,0.0017143452],"study_design_scores_gemma":[0.00017633037,0.0015833565,0.0107902605,0.00003313668,0.00004414229,0.0012533125,0.00011169581,0.001940092,0.97727966,0.00023256727,0.006542843,0.00001253068],"about_ca_topic_score_codex":0.00031162341,"about_ca_topic_score_gemma":0.0005330896,"teacher_disagreement_score":0.0015374647,"about_ca_system_score_codex":0.00025835054,"about_ca_system_score_gemma":0.00021909815,"threshold_uncertainty_score":0.0051433444},"labels":[],"label_agreement":null},{"id":"W2030383845","doi":"10.1371/journal.ppat.1003152","title":"Cyclosporine A Impairs Nucleotide Binding Oligomerization Domain (Nod1)-Mediated Innate Antibacterial Renal Defenses in Mice and Human Transplant Recipients","year":2013,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Assistance publique-Hôpitaux de Paris; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; California HIV/AIDS Research Program","keywords":"NOD1; CXCL2; NOD2; Biology; Innate immune system; TLR2; TLR4; Phagocytosis; Chemokine; Microbiology; Immunology; Pharmacology; Inflammation; Immune system; Chemokine receptor","score_opus":0.00871283133115456,"score_gpt":0.20811806283231452,"score_spread":0.19940523150115996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030383845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752337,0.001103046,0.0004841677,0.00009317226,0.00003280854,0.000024870744,0.00012836943,0.00006350029,0.0005466502],"genre_scores_gemma":[0.9973665,0.00090450596,0.00037216645,0.000071272916,0.000019830637,0.000041203086,0.0002246344,0.00001554123,0.0009843609],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99972755,0.000066629415,0.00003677248,0.00005154102,0.00005220241,0.000065254004],"domain_scores_gemma":[0.999708,0.000032547137,0.000085019536,0.00003222119,0.00001291193,0.00012934516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003990862,0.00054325577,0.00046652847,0.0004013274,0.00022951065,0.0003695759,0.00025253536,0.0004447268,0.0012885997],"category_scores_gemma":[0.00023275806,0.00023189858,0.00034984376,0.00018907255,0.00038771203,0.00025195457,0.00019796134,0.00086192664,0.00026237612],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026480309,0.0008077217,0.0007963788,0.00008501641,0.000034533437,0.00018478188,0.000051091854,0.00013870231,0.9922502,0.00013870072,0.00010750309,0.002757373],"study_design_scores_gemma":[0.0007543105,0.012573187,0.033242293,0.00004137459,0.00023534312,0.0018371487,0.000157812,0.0035512242,0.94295,0.00016884255,0.004457384,0.00003108801],"about_ca_topic_score_codex":0.0004931119,"about_ca_topic_score_gemma":0.00049470033,"teacher_disagreement_score":0.0012885997,"about_ca_system_score_codex":0.00025548608,"about_ca_system_score_gemma":0.00034846054,"threshold_uncertainty_score":0.0043107867},"labels":[],"label_agreement":null},{"id":"W2030692238","doi":"10.1073/pnas.1209253109","title":"Antibody WN1 222-5 mimics Toll-like receptor 4 binding in the recognition of LPS","year":2012,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Victoria","funders":"Eisai","keywords":"Lipid A; Receptor; Antibody; Toll-like receptor; Innate immune system; Immune system; Escherichia coli; Biology; Immunology; Cell biology; Lipopolysaccharide; Biochemistry; Gene","score_opus":0.047670180656652295,"score_gpt":0.3116524623923745,"score_spread":0.2639822817357222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030692238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99426275,0.0006470089,0.0025821177,0.00010651957,0.000031495354,0.000021512773,0.000040621886,0.000055020988,0.0022529836],"genre_scores_gemma":[0.9963541,0.0003369698,0.0018296975,0.000087647626,0.0000069405996,0.0000120998775,0.000112946276,0.000010097954,0.0012494737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999052,0.000019008252,0.000004507473,0.00001142443,0.000023461585,0.000036359783],"domain_scores_gemma":[0.9999646,0.0000043693935,0.00000708304,0.0000030985943,0.0000045619813,0.000016342397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012507044,0.0002956872,0.00016081992,0.0001384067,0.00011068577,0.00018900819,0.00033685451,0.0003212129,0.00083727186],"category_scores_gemma":[0.00011146363,0.00014872952,0.00013559239,0.00006483566,0.00019380766,0.00017077896,0.000175517,0.0005985182,0.000295734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034491194,0.0001490782,0.0003068192,0.000029156115,0.0000067922433,0.000066636625,0.00001056576,0.00054631813,0.99614656,0.0003308028,0.00010777876,0.001954622],"study_design_scores_gemma":[0.00011601656,0.0016320861,0.0019994257,0.0000081133585,0.000023744866,0.00030386532,0.00001644373,0.006925314,0.9858509,0.00014426767,0.0029724566,0.0000073559704],"about_ca_topic_score_codex":0.00057539897,"about_ca_topic_score_gemma":0.0006025838,"teacher_disagreement_score":0.00083727186,"about_ca_system_score_codex":0.0002430525,"about_ca_system_score_gemma":0.0002236058,"threshold_uncertainty_score":0.0028009415},"labels":[],"label_agreement":null},{"id":"W2030995593","doi":"10.1186/cc14039","title":"Aryl hydrocarbon receptor activation increases survival in polymicrobial sepsis","year":2014,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Children's Health Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina; Financiadora de Estudos e Projetos; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Japan Society for the Promotion of Science; Russian Foundation for Basic Research; London Health Sciences Centre","keywords":"Medicine; Aryl hydrocarbon receptor; Sepsis; Severe sepsis; Hydrocarbon; Intensive care medicine; Bioinformatics; Internal medicine; Septic shock; Biochemistry; Organic chemistry","score_opus":0.010648947110504127,"score_gpt":0.2568273698069609,"score_spread":0.2461784226964568,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2030995593","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876087,0.009484898,0.0007591917,0.00033266083,0.00014232579,0.000018044237,0.00022828105,0.00008663357,0.001339374],"genre_scores_gemma":[0.99473023,0.003218825,0.00033734617,0.00018063736,0.00009772584,0.000038898837,0.0002373958,0.0000098198525,0.0011490932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983597,0.00004269291,0.000008638226,0.000023088625,0.000032213393,0.000057474466],"domain_scores_gemma":[0.999652,0.000035312714,0.00012285601,0.000026614287,0.00002846023,0.00013472982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019495677,0.00025894583,0.0003738719,0.0002219446,0.00015616287,0.00020623892,0.00010210387,0.00036402466,0.0024092293],"category_scores_gemma":[0.00024826016,0.00007456618,0.00019356795,0.0001571976,0.00021829741,0.0002054413,0.0002887212,0.0009570099,0.0005280267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0073941397,0.00045821472,0.005080638,0.00022189008,0.000029475706,0.0004124934,0.00008446128,0.00011397462,0.96359265,0.00015195057,0.0007242495,0.021735799],"study_design_scores_gemma":[0.0004943406,0.035601854,0.46652472,0.00019020199,0.0002847315,0.0033828495,0.0006511859,0.0016996762,0.4721103,0.0011744986,0.01781945,0.00006616855],"about_ca_topic_score_codex":0.00008708745,"about_ca_topic_score_gemma":0.0001609718,"teacher_disagreement_score":0.0024092293,"about_ca_system_score_codex":0.00014455992,"about_ca_system_score_gemma":0.00015483274,"threshold_uncertainty_score":0.008059621},"labels":[],"label_agreement":null},{"id":"W2031051407","doi":"10.1038/cmi.2010.16","title":"Functional characterization of the NF-κB binding site in the human NOD2 promoter","year":2010,"lang":"en","type":"article","venue":"Cellular and Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Health Canada; Department of Education of Guangdong Province; Jinan University; Natural Science Foundation of Guangdong Province","keywords":"NOD2; Binding site; Transcription factor; Chromatin immunoprecipitation; Biology; Electrophoretic mobility shift assay; Molecular biology; Promoter; NF-κB; Reporter gene; Cell biology; Gene; Innate immune system; Gene expression; Genetics; Signal transduction; Receptor","score_opus":0.005595224328434183,"score_gpt":0.19251476880989424,"score_spread":0.18691954448146006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031051407","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9821034,0.0020047796,0.012376948,0.00018187547,0.000042873093,0.000050412025,0.001777097,0.000059939684,0.001402643],"genre_scores_gemma":[0.985515,0.00043510995,0.0059137717,0.00009523048,0.000022572678,0.00004830706,0.0051681157,0.000047470676,0.0027545504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998265,0.000035569283,0.00001355551,0.00005306433,0.00003620364,0.000035116456],"domain_scores_gemma":[0.9997261,0.00010385199,0.000030445055,0.000043277174,0.00003596114,0.00006035375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037315814,0.00028895857,0.00028127653,0.00024021305,0.00020393444,0.0003698406,0.00025438913,0.0002743202,0.002029595],"category_scores_gemma":[0.00043170148,0.00023409117,0.00046165095,0.00017835513,0.00040388678,0.00015974019,0.00022224827,0.0006085528,0.00090443855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032709024,0.000041448337,0.00039375733,0.000052853105,0.000006398359,0.00006387498,0.00003831561,0.00014947972,0.99724185,0.00019445027,0.000034228244,0.0014563639],"study_design_scores_gemma":[0.00010671146,0.0002977364,0.010846752,0.00003929339,0.000035032594,0.0008406993,0.000109000925,0.002274109,0.97719747,0.00029959952,0.007937587,0.000016030986],"about_ca_topic_score_codex":0.001338871,"about_ca_topic_score_gemma":0.0014725926,"teacher_disagreement_score":0.002029595,"about_ca_system_score_codex":0.0003399743,"about_ca_system_score_gemma":0.00046924545,"threshold_uncertainty_score":0.0067896843},"labels":[],"label_agreement":null},{"id":"W2031144746","doi":"10.1371/journal.pone.0087006","title":"Toll-Like Receptor 9 Signaling Delays Neutrophil Apoptosis by Increasing Transcription of Mcl-1","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"MG132; TLR9; Biology; Toll-Like Receptor 9; CpG site; Molecular biology; Cell biology; Apoptosis; DNA damage; Innate immune system; DNA; Receptor; DNA methylation; Proteasome inhibitor; Proteasome; Gene expression; Gene; Biochemistry","score_opus":0.017315601354748973,"score_gpt":0.19081844552171162,"score_spread":0.17350284416696266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031144746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99269474,0.0027188873,0.0030742185,0.00018841392,0.00004930681,0.00002446401,0.00021896872,0.00009460333,0.00093626976],"genre_scores_gemma":[0.9961041,0.0006544663,0.001604801,0.0000715494,0.00000940889,0.000020960111,0.00019722349,0.0000045030997,0.001332874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988604,0.000023012597,0.000012092292,0.000021023667,0.000024136163,0.00003378912],"domain_scores_gemma":[0.9999312,0.000009807818,0.000023744282,0.0000058600185,0.000009483652,0.00001984613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013167421,0.00021450536,0.00013587844,0.00012430854,0.00007406925,0.00017309118,0.00014330195,0.00016543637,0.0014195289],"category_scores_gemma":[0.000119576565,0.0000787387,0.00015621619,0.00005300073,0.00013122123,0.00016385672,0.00015359168,0.00049332937,0.00025231202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018703165,0.000032339653,0.00009656862,0.00004204949,0.0000022090887,0.000013640812,0.000006939817,0.000030334344,0.99809426,0.00005424965,0.000030143869,0.0014101851],"study_design_scores_gemma":[0.000029081823,0.0006107339,0.001600145,0.000006068781,0.000007246498,0.00009583004,0.000013694443,0.00049949053,0.995867,0.000039616247,0.0012286635,0.00000243681],"about_ca_topic_score_codex":0.00020104519,"about_ca_topic_score_gemma":0.00034366167,"teacher_disagreement_score":0.0014195289,"about_ca_system_score_codex":0.00023315453,"about_ca_system_score_gemma":0.00020929257,"threshold_uncertainty_score":0.0047487617},"labels":[],"label_agreement":null},{"id":"W2031219310","doi":"10.1371/journal.pone.0100613","title":"A Systems Biology Approach to the Analysis of Subset-Specific Responses to Lipopolysaccharide in Dendritic Cells","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"National Health and Medical Research Council; Medical Research Council; Canadian Institutes of Health Research; Cancer Institute NSW","keywords":"Biology; Transcriptome; Immune system; Lipopolysaccharide; CD8; Cell biology; Immunology; Dendritic cell; Computational biology; In vivo; Gene; Gene expression; Genetics","score_opus":0.03598063634247618,"score_gpt":0.23021582851090713,"score_spread":0.19423519216843094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031219310","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13771205,0.0018167517,0.84991086,0.0003842364,0.00012135506,0.0003735052,0.005898739,0.0018117558,0.0019708036],"genre_scores_gemma":[0.4916178,0.0018085054,0.49678612,0.00026361205,0.00008072751,0.0018330372,0.006441046,0.0002753745,0.0008937681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994948,0.00016141572,0.00003147849,0.00019570945,0.00007996772,0.0000366585],"domain_scores_gemma":[0.9993333,0.00047734796,0.00007008679,0.000053885204,0.000041593103,0.000023737917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010705997,0.00093450746,0.00095668033,0.0010062448,0.00060257915,0.0012333919,0.00059973216,0.0005872149,0.0012930066],"category_scores_gemma":[0.0013276753,0.0004148801,0.0019873912,0.0012347226,0.00067559426,0.00039172647,0.00072999607,0.0013949868,0.00025933178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043292932,0.0003209593,0.010988549,0.0023805064,0.0014380907,0.0003554758,0.0005404922,0.4298859,0.46009123,0.034754477,0.0013220003,0.057489436],"study_design_scores_gemma":[0.00003473708,0.0004259071,0.010263814,0.00006628624,0.0002861069,0.00009319871,0.00019415907,0.9019874,0.043995284,0.03340588,0.009168203,0.0000790768],"about_ca_topic_score_codex":0.00224269,"about_ca_topic_score_gemma":0.0021507742,"teacher_disagreement_score":0.00224269,"about_ca_system_score_codex":0.000940934,"about_ca_system_score_gemma":0.00087117555,"threshold_uncertainty_score":0.006826997},"labels":[],"label_agreement":null},{"id":"W2031445899","doi":"10.1128/iai.00762-07","title":"Neutrophils Play an Important Role in Host Resistance to Respiratory Infection with <i>Acinetobacter baumannii</i> in Mice","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":199,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"National Research Council Canada","keywords":"Biology; Chemokine; Acinetobacter baumannii; Immunology; Proinflammatory cytokine; Macrophage inflammatory protein; Microbiology; Tumor necrosis factor alpha; Pneumonia; Respiratory system; Spleen; Respiratory infection; Immune system; Inflammation; Medicine; Bacteria; Internal medicine; Pseudomonas aeruginosa","score_opus":0.00830968665926941,"score_gpt":0.24064591800524293,"score_spread":0.23233623134597353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031445899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98896885,0.0038344597,0.003057965,0.0006608632,0.00007530065,0.00009478167,0.00063589844,0.00034866517,0.0023230552],"genre_scores_gemma":[0.99091315,0.0017173148,0.0028274676,0.0002913258,0.00003505409,0.00018553484,0.0005185502,0.0000546032,0.0034569788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958044,0.000087661836,0.000040862367,0.00008480011,0.000081250575,0.00012499474],"domain_scores_gemma":[0.99967813,0.000031431853,0.00013108565,0.000033012566,0.00002853544,0.00009783754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033311962,0.00068536366,0.0004195277,0.0004355951,0.00022595342,0.00060604076,0.00031994455,0.000740367,0.001432959],"category_scores_gemma":[0.00021262484,0.0004137393,0.00043254058,0.00011749403,0.00042699496,0.00041814466,0.0002889145,0.0018049867,0.0005518797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006135284,0.00012137909,0.00040870172,0.000039011797,0.0000069670346,0.00006565813,0.000029243045,0.000064183056,0.9970016,0.00012412688,0.00007132413,0.0014541876],"study_design_scores_gemma":[0.0002503323,0.0034467697,0.02061309,0.00006666179,0.00006701977,0.0009760061,0.00015206737,0.00208005,0.96695876,0.00027480436,0.0050868737,0.00002760777],"about_ca_topic_score_codex":0.0005987019,"about_ca_topic_score_gemma":0.0007988148,"teacher_disagreement_score":0.001432959,"about_ca_system_score_codex":0.0005147969,"about_ca_system_score_gemma":0.0003137705,"threshold_uncertainty_score":0.0047937036},"labels":[],"label_agreement":null},{"id":"W2031632997","doi":"10.1007/s00441-014-1803-2","title":"IL-10 secreting CD21+ B cells are present in jejunal Peyer’s patches of sheep during fetal development","year":2014,"lang":"en","type":"article","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Biology; Immunology; Cytokine; Antibody; B cell; TLR9; Antigen; Lymphocyte; CpG Oligodeoxynucleotide; Population; Molecular biology; Medicine","score_opus":0.023936737341951866,"score_gpt":0.2803542332572456,"score_spread":0.2564174959152938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031632997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938501,0.003021187,0.00072797755,0.00007288664,0.000026264373,0.000009844163,0.00021575548,0.0000368358,0.0020389433],"genre_scores_gemma":[0.9945781,0.0009828244,0.0005061192,0.000042887084,0.000030167148,0.000022931315,0.00040014746,0.000025150417,0.0034116379],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998702,0.00002185249,0.000013842444,0.000032401455,0.000026142237,0.000035585697],"domain_scores_gemma":[0.99951744,0.00018103165,0.000087249646,0.00004667759,0.000058365353,0.00010931124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001981024,0.00023263824,0.00037984888,0.00079653366,0.0002281168,0.00053221965,0.00021915205,0.00045880047,0.0019487713],"category_scores_gemma":[0.0006397558,0.0004076217,0.00018170306,0.00018368191,0.0004588919,0.00046250634,0.00028557974,0.00090010185,0.0005442301],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001728615,0.000041339288,0.011046405,0.00010247039,0.000012448188,0.0025669138,0.0005829457,0.000038697355,0.9775688,0.00019629009,0.00009329537,0.0060217874],"study_design_scores_gemma":[0.00006421973,0.0011837817,0.4366836,0.00010830989,0.00012741715,0.0121642435,0.002554024,0.0006206942,0.53550047,0.00053271645,0.0104209315,0.00003968147],"about_ca_topic_score_codex":0.0009820369,"about_ca_topic_score_gemma":0.0011815656,"teacher_disagreement_score":0.0019487713,"about_ca_system_score_codex":0.00024011779,"about_ca_system_score_gemma":0.00012161875,"threshold_uncertainty_score":0.0065193176},"labels":[],"label_agreement":null},{"id":"W2031731180","doi":"10.1016/j.dental.2014.08.302","title":"Cytokine secretion screening of odontoblasts treated with chlorhexidine and epigallocatechin-gallate","year":2014,"lang":"en","type":"article","venue":"Dental Materials","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Materials science; Chlorhexidine; Gallate; Odontoblast; Secretion; Cytokine; Epigallocatechin gallate; Dentistry; Pharmacology; Composite material; Medicine; Dentin; Biology; Biochemistry; Internal medicine; Polyphenol","score_opus":0.005784202294100328,"score_gpt":0.19876728793637452,"score_spread":0.1929830856422742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031731180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99315804,0.001441518,0.0021255924,0.000117513664,0.000111967005,0.00009913636,0.0010666517,0.00003267693,0.0018468163],"genre_scores_gemma":[0.97872317,0.0020021768,0.006087714,0.00028854684,0.00007170153,0.0003567403,0.0027241565,0.000017984954,0.009727889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967027,0.000038835362,0.000043139436,0.00006191585,0.000092391085,0.000093508956],"domain_scores_gemma":[0.9998615,0.00003126003,0.000019009467,0.0000137412835,0.000048882102,0.000025625082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023199456,0.00046927927,0.00049817364,0.00028469623,0.00031660558,0.00028471687,0.00011870475,0.00034510726,0.0017082716],"category_scores_gemma":[0.00011978484,0.00016995212,0.00062526175,0.00039725474,0.0002726101,0.00018608535,0.00019350577,0.00068048784,0.00043588004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030313662,0.000034226094,0.00023544292,0.00003607137,0.0000032663766,0.00003097016,0.000023053577,0.0000100537245,0.9988211,0.000012401936,0.00001213701,0.00047819267],"study_design_scores_gemma":[0.000044550678,0.0008760895,0.014129919,0.0000072961793,0.000043982167,0.00008251416,0.00012638984,0.00020729979,0.9833664,0.000025967478,0.0010818985,0.000007708352],"about_ca_topic_score_codex":0.0006425018,"about_ca_topic_score_gemma":0.0013575216,"teacher_disagreement_score":0.0017082716,"about_ca_system_score_codex":0.00016946069,"about_ca_system_score_gemma":0.00032208933,"threshold_uncertainty_score":0.0057147145},"labels":[],"label_agreement":null},{"id":"W2031743395","doi":"10.1016/j.smim.2006.12.006","title":"The intestinal epithelial barrier: How to distinguish between the microbial flora and pathogens","year":2007,"lang":"en","type":"review","venue":"Seminars in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":204,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Immune system; Biology; Microbiology; Flora (microbiology); Immunity; Gastrointestinal tract; Bacteria; Innate immune system; Colonisation resistance; Commensalism; Barrier function; Intestinal mucosa; Immunology; Colonization; Cell biology; Medicine","score_opus":0.02183030377650234,"score_gpt":0.288650835133894,"score_spread":0.26682053135739164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031743395","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007502901,0.9970701,0.00043896437,0.0009803828,0.0009134191,0.0000028122183,0.000008998138,0.000010262054,0.0004999505],"genre_scores_gemma":[0.000580249,0.9965926,0.0005345059,0.00070993527,0.0008893101,0.0000062081003,0.000021145126,0.0000028345094,0.00066321966],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99968207,0.000055496952,0.000041088337,0.000063999774,0.00012420081,0.000033141998],"domain_scores_gemma":[0.99907255,0.00040770043,0.00008756199,0.000035665034,0.0002611163,0.00013543901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014740209,0.001423315,0.0031032912,0.0014930961,0.0003735379,0.002332721,0.0019009997,0.0034929034,0.001958025],"category_scores_gemma":[0.001250516,0.00043006544,0.00047825716,0.0015437087,0.0023154113,0.0041709733,0.0010863794,0.0046603912,0.0033802395],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016721456,0.0000682234,0.00024106722,0.008624946,0.000085920816,0.00029398417,0.00006160486,0.00033720222,0.0058025736,0.006681324,0.055407375,0.92222863],"study_design_scores_gemma":[0.000042792974,0.00009548536,0.0008364411,0.0022896344,0.00011942353,0.0020006003,0.0001349219,0.00017613823,0.0015038204,0.006764362,0.9859978,0.000038597937],"about_ca_topic_score_codex":0.000874491,"about_ca_topic_score_gemma":0.0013273219,"teacher_disagreement_score":0.0034929034,"about_ca_system_score_codex":0.000898776,"about_ca_system_score_gemma":0.001312737,"threshold_uncertainty_score":0.007795453},"labels":[],"label_agreement":null},{"id":"W2031901387","doi":"10.1046/j.1439-0450.2000.00395.x","title":"<i>In Vitro</i> and <i>In Vivo</i> Effects of an Immunomodulator Composed of <i>Escherichia Coli</i> Lipopolysaccharide and <i>Propionibacterium granulosum</i>‐Inactivated Cells in Pigs","year":2000,"lang":"en","type":"article","venue":"Journal of Veterinary Medicine Series B","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eurostars; Institute of Nutrition, Metabolism and Diabetes","keywords":"Peripheral blood mononuclear cell; Lipopolysaccharide; Cytokine; In vivo; Tumor necrosis factor alpha; Molecular biology; Antibody; Biology; Interleukin; Ex vivo; Microbiology; In vitro; Immunology; Biochemistry","score_opus":0.005940245519275573,"score_gpt":0.22556009036707447,"score_spread":0.2196198448477989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2031901387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984434,0.00044496453,0.00025787432,0.000052883846,0.0000353649,0.000039562718,0.00015133373,0.000017317529,0.0005572737],"genre_scores_gemma":[0.99610895,0.0007840563,0.0007905295,0.0001740815,0.0000647912,0.00015342273,0.00062356563,0.000012420696,0.0012881947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994136,0.00014908097,0.00004209411,0.0001261754,0.00006461029,0.00020454793],"domain_scores_gemma":[0.99959224,0.0000891715,0.0001290132,0.00003805663,0.000031397547,0.000120110846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004361936,0.0007519144,0.0005113892,0.00032506685,0.00021511939,0.00035014388,0.00031100935,0.0006233111,0.00067347864],"category_scores_gemma":[0.00024620537,0.00037544305,0.00061394536,0.00013194683,0.00060747523,0.00037920574,0.00021378131,0.001047001,0.00033106646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0045583127,0.0013747044,0.00073629135,0.00012206055,0.000021606653,0.000093771734,0.000042698433,0.00018662613,0.99114615,0.000029702154,0.00007314556,0.0016149628],"study_design_scores_gemma":[0.00073099165,0.1076079,0.025724629,0.000048983224,0.00021026205,0.0005038977,0.00013716634,0.0010228675,0.862389,0.00008844106,0.0014987373,0.000037179136],"about_ca_topic_score_codex":0.00090409257,"about_ca_topic_score_gemma":0.000719268,"teacher_disagreement_score":0.00090409257,"about_ca_system_score_codex":0.00035269657,"about_ca_system_score_gemma":0.00029820995,"threshold_uncertainty_score":0.0025590062},"labels":[],"label_agreement":null},{"id":"W2032211683","doi":"10.1097/01.ccm.0b013e3181620652","title":"Acute phase response impairs host defense against Pseudomonas aeruginosa pneumonia in mice*","year":2008,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Pseudomonas aeruginosa; Medicine; Pneumonia; Acute-phase protein; Immunology; Ex vivo; Inflammation; Lung; In vivo; Proinflammatory cytokine; Microbiology; Internal medicine; Biology; Bacteria","score_opus":0.01595230420695377,"score_gpt":0.3012402491674072,"score_spread":0.28528794496045345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032211683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936633,0.0015044522,0.0022422858,0.0002985318,0.00007332265,0.00013140406,0.0006399738,0.00019624384,0.0012505553],"genre_scores_gemma":[0.984894,0.002204703,0.0047695143,0.0004646447,0.00006914859,0.0005704607,0.0012841902,0.00007787259,0.0056654485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955803,0.00010854652,0.000054146465,0.00008693424,0.00007837273,0.00011402709],"domain_scores_gemma":[0.9995858,0.000042227224,0.00016371945,0.000050361352,0.00002964462,0.000128243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038943934,0.0011716974,0.0004894996,0.00061300985,0.00026936946,0.0004466944,0.00038511396,0.0006563312,0.0023992222],"category_scores_gemma":[0.00021870137,0.0003103725,0.00048614302,0.00022865967,0.00047087914,0.00040114648,0.00026941183,0.0016380831,0.00082172523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020489409,0.00076455274,0.00046430813,0.000115782605,0.000011590142,0.00014513779,0.0000456722,0.00010242795,0.9941909,0.0001359696,0.000111085705,0.001863657],"study_design_scores_gemma":[0.0006175183,0.015539199,0.020206902,0.000111168454,0.00008894825,0.0016615598,0.00018018267,0.0022134657,0.9536261,0.00023605753,0.005488895,0.000030040439],"about_ca_topic_score_codex":0.0002898639,"about_ca_topic_score_gemma":0.00041375446,"teacher_disagreement_score":0.0023992222,"about_ca_system_score_codex":0.00030243347,"about_ca_system_score_gemma":0.00031821427,"threshold_uncertainty_score":0.008026242},"labels":[],"label_agreement":null},{"id":"W2032388711","doi":"10.1016/j.brainres.2006.03.112","title":"Differential expression of the CD14/TLR4 complex and inflammatory signaling molecules following i.c.v. administration of LPS","year":2006,"lang":"en","type":"article","venue":"Brain Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"TLR4; Inflammation; Choroid plexus; Ependyma; CD14; Neuroinflammation; Meninges; Microglia; Parenchyma; Lipopolysaccharide; Biology; Pathology; Central nervous system; Medicine; Immunology; Immune system; Endocrinology","score_opus":0.03279694177823911,"score_gpt":0.3140752208035587,"score_spread":0.2812782790253196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032388711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947513,0.0010276232,0.0013969643,0.00021179787,0.00012552942,0.000056918303,0.00058738334,0.000055219534,0.0017872321],"genre_scores_gemma":[0.9881275,0.0010389212,0.00303475,0.00019212997,0.00009037229,0.00021155915,0.0012045159,0.000043528653,0.0060567786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999553,0.000059795184,0.000029767729,0.000061656,0.00008174826,0.00021396618],"domain_scores_gemma":[0.99955195,0.00008633389,0.00009129579,0.000046435,0.000077455494,0.00014648137],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027100163,0.00063862756,0.00076674385,0.0006735531,0.0002855416,0.00072855013,0.00038170905,0.00076149235,0.002375645],"category_scores_gemma":[0.00049654447,0.00033772193,0.00040952102,0.00039217132,0.0006866457,0.0005621133,0.0002734976,0.0020094966,0.00067971135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005527498,0.00032053722,0.00024133612,0.000105248495,0.000025327205,0.00013598247,0.00004605664,0.00012355618,0.9905786,0.00030393645,0.00015852813,0.0024334996],"study_design_scores_gemma":[0.00015587632,0.0021966042,0.006659745,0.000029282453,0.000056888923,0.00024979358,0.00014193621,0.0013375989,0.98791844,0.000322129,0.00091180834,0.000019812744],"about_ca_topic_score_codex":0.0009079034,"about_ca_topic_score_gemma":0.0013222408,"teacher_disagreement_score":0.002375645,"about_ca_system_score_codex":0.00077109516,"about_ca_system_score_gemma":0.00072641036,"threshold_uncertainty_score":0.007947266},"labels":[],"label_agreement":null},{"id":"W2032728957","doi":"10.1159/000231591","title":"Inflammation-Inducing Factors from Human Lymphocytes","year":2009,"lang":"en","type":"article","venue":"International Archives of Allergy and Applied Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Immunology; Inflammation; Medicine; Biology","score_opus":0.007314571697663648,"score_gpt":0.21923815583374215,"score_spread":0.2119235841360785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032728957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85922813,0.054515067,0.02495316,0.0014042526,0.0013061054,0.0019396658,0.009090207,0.00081824034,0.046745274],"genre_scores_gemma":[0.89988977,0.019203769,0.013878461,0.00086318987,0.001306742,0.0014755008,0.036758017,0.00010384727,0.026520688],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995926,0.00010954937,0.000036709775,0.00005232634,0.00009608871,0.000112793285],"domain_scores_gemma":[0.999785,0.00008472239,0.000016491047,0.00004831223,0.0000338681,0.000031702468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056537293,0.0009527036,0.00032909965,0.00052703946,0.00020745184,0.000771021,0.00034472483,0.00042026018,0.010623082],"category_scores_gemma":[0.0006853098,0.00021197669,0.000546744,0.0004157634,0.00017469884,0.0001977495,0.00044315212,0.0011738356,0.0065667257],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001813417,0.00042043888,0.00089555926,0.00051861577,0.000033589833,0.0007059119,0.0001500623,0.00014769593,0.9610521,0.0003495214,0.0021467542,0.031766213],"study_design_scores_gemma":[0.0016453041,0.005789745,0.014606211,0.00034094093,0.00021220716,0.004698324,0.00022533111,0.00051458925,0.82202166,0.0005268783,0.14938198,0.000036822163],"about_ca_topic_score_codex":0.0002858674,"about_ca_topic_score_gemma":0.0003403638,"teacher_disagreement_score":0.010623082,"about_ca_system_score_codex":0.00014911406,"about_ca_system_score_gemma":0.00034679292,"threshold_uncertainty_score":0.03553772},"labels":[],"label_agreement":null},{"id":"W2033489525","doi":"10.1128/jvi.02305-09","title":"Molecular Characterization of<i>In Vivo</i>Adjuvant Activity in Ferrets Vaccinated against Influenza Virus","year":2010,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institutes of Health; Shantou University Medical College; Li Ka Shing Foundation","keywords":"Adjuvant; Biology; Virology; CpG Oligodeoxynucleotide; Vaccination; Virus; Influenza A virus; Interferon; Major histocompatibility complex; Immunology; Antigen; Gene expression; Gene","score_opus":0.006731595909626387,"score_gpt":0.2436200433603317,"score_spread":0.2368884474507053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033489525","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979023,0.00069478055,0.0008960774,0.000038717168,0.00001475253,0.000020130077,0.00013252547,0.000015912074,0.0002848433],"genre_scores_gemma":[0.9969277,0.000477316,0.0012416878,0.00006752417,0.000014055653,0.00003647741,0.00045288398,0.0000145447075,0.00076790055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999367,0.000011662663,0.0000052084492,0.000017525506,0.000009976147,0.000018909404],"domain_scores_gemma":[0.99990916,0.000023411185,0.000032685897,0.0000063559746,0.000012475479,0.000015891397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015844121,0.00033030479,0.0002043882,0.00016862703,0.00007404058,0.00017322623,0.00009760142,0.00026929963,0.00045262143],"category_scores_gemma":[0.0001638525,0.000074668285,0.00021567884,0.000050319715,0.00017042694,0.00018301689,0.000056999867,0.00033386264,0.00014923554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007906068,0.000015921401,0.00020588415,0.000015359725,0.0000017460733,0.000010174946,0.0000037281084,0.000023883855,0.99932265,0.00000918441,0.000004748855,0.00030765805],"study_design_scores_gemma":[0.000013527066,0.0010353896,0.007286318,0.0000062637373,0.000023281242,0.00015663168,0.000021517752,0.0005242668,0.99030685,0.000036831898,0.00058584515,0.000003254236],"about_ca_topic_score_codex":0.0003799097,"about_ca_topic_score_gemma":0.00036610427,"teacher_disagreement_score":0.00045262143,"about_ca_system_score_codex":0.0002504741,"about_ca_system_score_gemma":0.00009343969,"threshold_uncertainty_score":0.0018173456},"labels":[],"label_agreement":null},{"id":"W2033745905","doi":"10.3168/jds.s0022-0302(03)73832-6","title":"Elevated Milk Soluble CD14 in Bovine Mammary Glands Challenged with Escherichia coli Lipopolysaccharide","year":2003,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ste. Anne's Hospital; McGill University","funders":"","keywords":"Lactation; Lactoferrin; Lipopolysaccharide; Somatic cell count; Biology; Inflammation; Andrology; Endocrinology; Internal medicine; Immunology; Chemistry; Medicine; Ice calving; Biochemistry; Pregnancy","score_opus":0.011670597062472823,"score_gpt":0.2331880895397282,"score_spread":0.22151749247725538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033745905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989466,0.00068503735,0.00013075731,0.000018941879,0.000005173644,0.000004518078,0.00006454981,0.0000052086693,0.00013927807],"genre_scores_gemma":[0.99815553,0.0004415985,0.00040219908,0.000037289483,0.000007765361,0.000012406113,0.00023294818,0.0000040437935,0.0007061883],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998863,0.000016373766,0.000008010848,0.00002300692,0.000035716217,0.000030617924],"domain_scores_gemma":[0.9998599,0.000018519866,0.00005615234,0.000008671821,0.000022939055,0.00003389164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013888236,0.00014274375,0.00022892188,0.00023131097,0.00013600118,0.00030619433,0.00009620648,0.0002248683,0.0006267154],"category_scores_gemma":[0.00023430644,0.00015663367,0.000122405,0.000118890755,0.00016884327,0.00014150456,0.00019687093,0.000256681,0.00017801023],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082858815,0.000026347774,0.009576624,0.000039572085,0.0000063414923,0.00009980208,0.00009987101,0.000022258535,0.98780197,0.000015164389,0.000018563927,0.0014648216],"study_design_scores_gemma":[0.000041228297,0.0020585104,0.57865644,0.000029754592,0.0000476041,0.00087624,0.0007172905,0.0012505646,0.4135163,0.00009958934,0.0026938892,0.000012650248],"about_ca_topic_score_codex":0.00085285265,"about_ca_topic_score_gemma":0.0008266849,"teacher_disagreement_score":0.00085285265,"about_ca_system_score_codex":0.00031952572,"about_ca_system_score_gemma":0.00013530748,"threshold_uncertainty_score":0.0023183227},"labels":[],"label_agreement":null},{"id":"W2033862008","doi":"10.1177/1753425907087257","title":"Structural investigations into the interaction of hemoglobin and part structures with bacterial endotoxins","year":2008,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Lipopolysaccharide; Lipid A; Hemoglobin; Biophysics; Chemistry; Bacterial outer membrane; Heptose; Micelle; Heme; Membrane; Mutant; Biochemistry; Crystallography; Biology","score_opus":0.017931461646473672,"score_gpt":0.23550130740128067,"score_spread":0.217569845754807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033862008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933515,0.0012861524,0.0045038215,0.000090213245,0.000008055401,0.0000055956666,0.00005704859,0.000017524932,0.0006802293],"genre_scores_gemma":[0.99652356,0.0008133228,0.0019268641,0.00005506863,0.000007474331,0.000005666505,0.0002152632,0.0000054025113,0.00044740137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993324,0.000021930491,0.000002656039,0.000010691289,0.000019526524,0.000011995951],"domain_scores_gemma":[0.9998628,0.000057319892,0.0000321085,0.000009992634,0.000022873606,0.000014944918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011169088,0.0001538834,0.0001067806,0.00011272802,0.00011935283,0.00008285644,0.00018533492,0.00019056952,0.00060925185],"category_scores_gemma":[0.00023660253,0.000054167376,0.00011853847,0.000102136684,0.0001906915,0.00015730932,0.000121069716,0.00033294628,0.00014504165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058730388,0.000025826626,0.00068457343,0.00004382653,0.000007974998,0.0000752275,0.000033323697,0.000609484,0.99563557,0.00034367753,0.000035994588,0.0024457593],"study_design_scores_gemma":[0.000013823763,0.00080669834,0.026126161,0.000015981006,0.000036629343,0.00065681624,0.00014899552,0.011302842,0.95538294,0.00087274646,0.0046210354,0.000015363581],"about_ca_topic_score_codex":0.00021709397,"about_ca_topic_score_gemma":0.00013006269,"teacher_disagreement_score":0.00060925185,"about_ca_system_score_codex":0.00012605607,"about_ca_system_score_gemma":0.00008694158,"threshold_uncertainty_score":0.0020381212},"labels":[],"label_agreement":null},{"id":"W2034181316","doi":"10.1179/096805105x37394","title":"Anti-endotoxin properties of cationic host defence peptides and proteins","year":2005,"lang":"en","type":"review","venue":"Journal of Endotoxin Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Genome Prairie; Genome British Columbia","keywords":"Innate immune system; Biology; Antimicrobial peptides; Immune system; Immunity; Acquired immune system; Inflammation; Receptor; Host (biology); Immunology; Microbiology; Antimicrobial; Ecology; Biochemistry","score_opus":0.16009749506798726,"score_gpt":0.40110472533848873,"score_spread":0.24100723027050147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034181316","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006334818,0.98976266,0.0011358071,0.00016927955,0.0002602318,0.000010490622,0.000058114038,0.000020164587,0.0022483526],"genre_scores_gemma":[0.035298295,0.95950425,0.0015555734,0.0003767578,0.0004660469,0.00003264573,0.00013837403,0.0000061693677,0.0026219601],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998821,0.000020795998,0.000014339969,0.000019488525,0.000046021392,0.000017274044],"domain_scores_gemma":[0.99990535,0.00003513933,0.000024358667,0.0000032851476,0.000021416623,0.0000104058145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018740675,0.00036751456,0.00046771285,0.00049754325,0.000114129245,0.0004097059,0.00027705322,0.00040904712,0.0011037361],"category_scores_gemma":[0.00026184932,0.000087912325,0.00023514837,0.00040076673,0.00023383956,0.00052706327,0.00027915742,0.0005392506,0.0004989316],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003212962,0.00007912105,0.0005090426,0.021442924,0.00010601176,0.0010735397,0.00014722053,0.0007678544,0.18967856,0.006282116,0.0060249357,0.7735674],"study_design_scores_gemma":[0.000045084398,0.0010213484,0.005733255,0.0019578263,0.00013533584,0.006805169,0.000102128404,0.00033493707,0.06414797,0.0033957285,0.91626644,0.000054756707],"about_ca_topic_score_codex":0.00017225363,"about_ca_topic_score_gemma":0.00013151811,"teacher_disagreement_score":0.0011037361,"about_ca_system_score_codex":0.00015815729,"about_ca_system_score_gemma":0.00018413627,"threshold_uncertainty_score":0.003692329},"labels":[],"label_agreement":null},{"id":"W2034285135","doi":"10.1016/s0016-5085(00)70362-3","title":"Antibiotic therapy attenuates colitis in interleukin 10 gene–deficient mice","year":2000,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":234,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Colitis; Metronidazole; Neomycin; Antibiotics; Bacteria; Ciprofloxacin; Microbiology; Medicine; Inflammation; Biology; Immunology","score_opus":0.008436271850699454,"score_gpt":0.2165677753459177,"score_spread":0.20813150349521825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034285135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938385,0.0014094973,0.0020211898,0.00059447065,0.0001828194,0.00003906455,0.0003564024,0.00034441237,0.0012137012],"genre_scores_gemma":[0.98743117,0.0021421514,0.0037225103,0.00029735029,0.0001301897,0.00012024318,0.00063993916,0.00015470572,0.005361729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996151,0.00008013761,0.000039738887,0.0000674899,0.000079841775,0.00011770538],"domain_scores_gemma":[0.9988722,0.00017158096,0.000380411,0.000095512674,0.00004579646,0.00043434935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024790512,0.00092484494,0.0009531807,0.0009838752,0.00028893875,0.00051448756,0.0005638535,0.0010101305,0.001909228],"category_scores_gemma":[0.00043010013,0.00039071447,0.0004505777,0.0003232059,0.00085323147,0.0005640801,0.00025163958,0.0022396082,0.0005896745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018291454,0.00056486827,0.00021834456,0.000046670724,0.000013382523,0.00011440246,0.000020091386,0.00011624382,0.994826,0.00013581935,0.00015009193,0.0019648988],"study_design_scores_gemma":[0.00071949366,0.005293741,0.0054169325,0.000038959384,0.000098847915,0.0005727716,0.00009098544,0.0021548786,0.9819025,0.00022238107,0.0034638313,0.00002468715],"about_ca_topic_score_codex":0.000583907,"about_ca_topic_score_gemma":0.001014978,"teacher_disagreement_score":0.001909228,"about_ca_system_score_codex":0.00035625094,"about_ca_system_score_gemma":0.00048713986,"threshold_uncertainty_score":0.0063869953},"labels":[],"label_agreement":null},{"id":"W2034394906","doi":"10.1007/s00134-003-1796-x","title":"Coupled plasma filtration adsorption","year":2003,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bell (Canada)","funders":"","keywords":"Septic shock; Sepsis; Medicine; Immunosuppression; Shock (circulatory); Intensive care medicine; Inflammation; Organ dysfunction; Immunology; Pharmacology; Internal medicine","score_opus":0.013618583598487102,"score_gpt":0.25051969890215214,"score_spread":0.23690111530366503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034394906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56612945,0.013627703,0.3077619,0.0022094992,0.002781669,0.0030367062,0.0028599852,0.006141067,0.095452055],"genre_scores_gemma":[0.7611866,0.005341563,0.08628757,0.00254939,0.0006403915,0.0018260306,0.0058093043,0.00063678314,0.13572243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860114,0.00017421873,0.00004552992,0.0004037101,0.000441704,0.00033380956],"domain_scores_gemma":[0.99971765,0.00008432189,0.00002030472,0.000053138563,0.00009011338,0.000034498804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065333594,0.0010816787,0.0010400718,0.0007352557,0.0010316776,0.00080966676,0.0012393302,0.0012064949,0.015296367],"category_scores_gemma":[0.0005999969,0.00050126936,0.0008633463,0.0006512332,0.00031188826,0.00053491053,0.0014465358,0.0015522712,0.008459411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040168336,0.0002755379,0.0003647928,0.00034053522,0.000108385895,0.00013509917,0.00014860215,0.0005002504,0.9571959,0.002485834,0.0056058313,0.032437637],"study_design_scores_gemma":[0.00008864721,0.0005928618,0.0025867433,0.00003338972,0.000071839924,0.00026132655,0.000049757982,0.005753024,0.9357354,0.00063492154,0.054143835,0.00004820042],"about_ca_topic_score_codex":0.002268386,"about_ca_topic_score_gemma":0.0020322856,"teacher_disagreement_score":0.015296367,"about_ca_system_score_codex":0.0006617908,"about_ca_system_score_gemma":0.0006742483,"threshold_uncertainty_score":0.05117148},"labels":[],"label_agreement":null},{"id":"W2034779847","doi":"10.1159/000380910","title":"Sequential Immune Responses: The Weapons of Immunity","year":2015,"lang":"en","type":"review","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"National Heart, Lung, and Blood Institute","keywords":"Immune system; Innate immune system; Biology; Immunity; Acquired immune system; Macrophage; Immunology; Host (biology); Antigen; CCL18; Genetics; In vitro","score_opus":0.06781719523171753,"score_gpt":0.3491689502938698,"score_spread":0.28135175506215226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034779847","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000081632745,0.99676126,0.00035167055,0.00047019136,0.00070582505,0.0000050632393,0.00001144839,0.000013085462,0.001599834],"genre_scores_gemma":[0.0011952476,0.99555224,0.0003785075,0.0006161744,0.0006797228,0.000011615247,0.00003092945,0.0000042212873,0.0015311934],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99963725,0.00006541054,0.000044024717,0.00007323383,0.00013865462,0.000041362007],"domain_scores_gemma":[0.9995172,0.00021040248,0.00006597765,0.000026810458,0.000119623895,0.00005997053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009391606,0.00112526,0.0015592008,0.0023492733,0.00048338875,0.0016448371,0.0014293548,0.002059793,0.0030626103],"category_scores_gemma":[0.0009286189,0.00035702475,0.00059213204,0.0019210514,0.0015913857,0.0032093602,0.0011021711,0.0035625666,0.0030930599],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007178474,0.00006533078,0.00020381661,0.012745254,0.000068501664,0.00026465353,0.00015871786,0.00045962003,0.002621745,0.031494062,0.07125371,0.8805929],"study_design_scores_gemma":[0.00000526672,0.0000364293,0.0002179869,0.001175292,0.000021457734,0.0008172069,0.000041131072,0.00005192383,0.0002962465,0.0051456788,0.9921778,0.000013550024],"about_ca_topic_score_codex":0.000792487,"about_ca_topic_score_gemma":0.0010119472,"teacher_disagreement_score":0.0030626103,"about_ca_system_score_codex":0.0015074895,"about_ca_system_score_gemma":0.0012586364,"threshold_uncertainty_score":0.010937691},"labels":[],"label_agreement":null},{"id":"W2034925671","doi":"10.1097/00003246-200005000-00045","title":"Coupled plasma filtration-adsorption in a rabbit model of endotoxic shock","year":2000,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":339,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bell (Canada)","funders":"","keywords":"Medicine; Septic shock; Extracorporeal; Lipopolysaccharide; Hemofiltration; Proinflammatory cytokine; Anesthesia; Sepsis; Internal medicine; Inflammation","score_opus":0.01698920583428542,"score_gpt":0.2720366504253212,"score_spread":0.2550474445910358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2034925671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974081,0.001138715,0.0007374311,0.000067380206,0.000056917313,0.00036995573,0.000042625237,0.000021771963,0.0001571001],"genre_scores_gemma":[0.9924118,0.0020729182,0.0024411369,0.00026700477,0.00017365518,0.0011308513,0.0002494818,0.000008985203,0.0012440854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991049,0.00027338124,0.00009453363,0.00013778824,0.00022214843,0.000167182],"domain_scores_gemma":[0.9993253,0.00007716605,0.00032303372,0.000091635644,0.000049749695,0.00013312565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015190764,0.0010533906,0.001821463,0.00036128113,0.00026010012,0.0004856532,0.0005785749,0.00086471206,0.0010623058],"category_scores_gemma":[0.0007014317,0.00041205366,0.0007037487,0.00026192798,0.0007592443,0.000524142,0.00033564694,0.0010175267,0.0002564816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.24732918,0.047008805,0.004763122,0.0015513815,0.0006041008,0.0004768767,0.00018388646,0.0008337021,0.66466475,0.0003468143,0.00037914832,0.03185831],"study_design_scores_gemma":[0.024250202,0.83994424,0.008191624,0.000062650855,0.0005334613,0.0006149031,0.0000720353,0.000926367,0.12333449,0.00009692289,0.0019387078,0.000034418346],"about_ca_topic_score_codex":0.0002492632,"about_ca_topic_score_gemma":0.0004068344,"teacher_disagreement_score":0.001821463,"about_ca_system_score_codex":0.00031467818,"about_ca_system_score_gemma":0.00048554814,"threshold_uncertainty_score":0.008033693},"labels":[],"label_agreement":null},{"id":"W2035454589","doi":"10.1073/pnas.0811273106","title":"Functional and genetic evidence that the Mal/TIRAP allele variant 180L has been selected by providing protection against septic shock","year":2009,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"European Social Fund; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; Eusko Jaurlaritza; Euskal Herriko Unibertsitatea; Science Foundation Ireland; University of Oxford","keywords":"Biology; Immunology; Innate immune system; Allele; TLR2; TLR9; TLR4; Proinflammatory cytokine; Sepsis; Genetics; Immune system; Gene; Inflammation","score_opus":0.05196068671904471,"score_gpt":0.2575916993846951,"score_spread":0.2056310126656504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035454589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988405,0.00022409658,0.00027910183,0.00007724014,0.000010541222,0.0000022474312,0.0001092322,0.000005227772,0.0004517762],"genre_scores_gemma":[0.99924195,0.00011257847,0.00024023336,0.000059255475,0.000026972568,0.00000260606,0.00010696086,0.000004365145,0.00020510383],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985564,0.000046349636,0.000019103589,0.000033806078,0.000025603436,0.000019436502],"domain_scores_gemma":[0.99961275,0.00010489966,0.00013949022,0.000039341838,0.000032044438,0.00007142764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000280501,0.0003008176,0.00018425394,0.00041804338,0.000128953,0.00017538232,0.00016576337,0.00035713488,0.0028404722],"category_scores_gemma":[0.00058099866,0.00009117454,0.00017267097,0.00029756612,0.00039807853,0.000078156256,0.00016989556,0.0002485337,0.0002669669],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048606857,0.0002834514,0.16036414,0.00017117341,0.00030168277,0.005694987,0.0001922551,0.0003668606,0.81236887,0.0006961658,0.00038840453,0.014311359],"study_design_scores_gemma":[0.0004425254,0.0023167664,0.8895655,0.00004632722,0.0005327679,0.03507632,0.00033395182,0.001796131,0.06456597,0.001095821,0.0041862517,0.00004162944],"about_ca_topic_score_codex":0.00023050584,"about_ca_topic_score_gemma":0.00015513407,"teacher_disagreement_score":0.0028404722,"about_ca_system_score_codex":0.00006649511,"about_ca_system_score_gemma":0.000093019895,"threshold_uncertainty_score":0.009502292},"labels":[],"label_agreement":null},{"id":"W2035682600","doi":"10.1016/j.taap.2005.12.014","title":"The effects of dexamethasone on rat brain cortical nuclear factor kappa B (NF-κB) in endotoxic shock","year":2006,"lang":"en","type":"article","venue":"Toxicology and Applied Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; University of Manitoba","keywords":"P50; Electrophoretic mobility shift assay; Dexamethasone; NF-κB; Lipopolysaccharide; Chemistry; NFKB1; IκBα; Nuclear protein; Blot; Molecular biology; Endocrinology; Internal medicine; Pharmacology; Biology; Transcription factor; Biochemistry; Apoptosis; Medicine","score_opus":0.005575239742664478,"score_gpt":0.24324866561819478,"score_spread":0.2376734258755303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035682600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98995167,0.007454645,0.0006235622,0.00037277577,0.00026763583,0.000025647321,0.000350025,0.000032756154,0.0009211703],"genre_scores_gemma":[0.9935163,0.0036764834,0.00026673608,0.000071513954,0.00006440803,0.000023147939,0.00020712422,0.0000072358353,0.0021670163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998167,0.000031386124,0.000015255641,0.000023722327,0.000022103774,0.00009085003],"domain_scores_gemma":[0.9996437,0.00010425633,0.000051116036,0.00005634724,0.000035768626,0.00010884307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022659547,0.0007292868,0.0005108283,0.0002942973,0.00035982905,0.00041150156,0.00039917315,0.0005775121,0.0026514814],"category_scores_gemma":[0.00047423682,0.00028188084,0.00044896288,0.00038851955,0.001021635,0.0007463244,0.00026542507,0.0013919041,0.00035079525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.057655804,0.0009705394,0.0015571278,0.0003347288,0.00008762855,0.0009898836,0.0003494295,0.00051800563,0.9243619,0.0007395052,0.0003403447,0.012095151],"study_design_scores_gemma":[0.0006553882,0.0055211014,0.008882998,0.000033571956,0.00017078409,0.00033822443,0.0005962639,0.00046535986,0.9806755,0.0003973421,0.0022271608,0.000036284266],"about_ca_topic_score_codex":0.0029456515,"about_ca_topic_score_gemma":0.004557753,"teacher_disagreement_score":0.0029456515,"about_ca_system_score_codex":0.00046858683,"about_ca_system_score_gemma":0.00074967963,"threshold_uncertainty_score":0.008870065},"labels":[],"label_agreement":null},{"id":"W2035729149","doi":"10.1172/jci36551","title":"Triggering of TLR7 and TLR8 expressed by human lung cancer cells induces cell survival and chemoresistance","year":2010,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":232,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Cancéropôle Ile de France; Institut National Du Cancer; Institute of Cancer Research; Institut National de la Santé et de la Recherche Médicale","keywords":"TLR7; Cancer research; Lung cancer; Biology; Downregulation and upregulation; Immunotherapy; Cell; Immune system; Immunology; Medicine; Pathology; Innate immune system; Toll-like receptor; Gene","score_opus":0.028887337097523405,"score_gpt":0.3334194015012781,"score_spread":0.3045320644037547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035729149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918154,0.0025279422,0.0021669278,0.00015962747,0.000035955025,0.00004256097,0.00030177613,0.000067283174,0.002882489],"genre_scores_gemma":[0.9945996,0.0007975974,0.0015688514,0.00007836701,0.000016404763,0.0000586953,0.0008353299,0.000009446328,0.0020357664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968565,0.000071081246,0.000021394224,0.000034942586,0.00008678777,0.00010010803],"domain_scores_gemma":[0.9998704,0.00004163717,0.000019050582,0.00002879055,0.000023167304,0.000016992628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015319779,0.00020215816,0.00027217745,0.00018448263,0.00015771408,0.0003315181,0.00009570834,0.00025423928,0.0030723917],"category_scores_gemma":[0.00022458527,0.00009632885,0.0002439926,0.00015141512,0.00014449417,0.000123618,0.00025055557,0.0004625888,0.001015125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017946702,0.00005234042,0.00039624466,0.000046086723,0.0000057925427,0.000056904784,0.000021389518,0.000060315084,0.9967616,0.00006703462,0.000096015065,0.0022567878],"study_design_scores_gemma":[0.000031460535,0.0007784854,0.004221271,0.000009656574,0.000014177616,0.00047289042,0.000072861236,0.0009099828,0.98920864,0.00006328833,0.0042130905,0.000004185232],"about_ca_topic_score_codex":0.00024818393,"about_ca_topic_score_gemma":0.0003319036,"teacher_disagreement_score":0.0030723917,"about_ca_system_score_codex":0.00020328542,"about_ca_system_score_gemma":0.00017835376,"threshold_uncertainty_score":0.010278165},"labels":[],"label_agreement":null},{"id":"W2036350098","doi":"10.1016/j.imbio.2007.11.004","title":"The zinc finger protein and transcriptional repressor Gfi1 as a regulator of the innate immune response","year":2008,"lang":"en","type":"article","venue":"Immunobiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Clinical Research Institute; Université de Montréal","funders":"Deutsche Forschungsgemeinschaft","keywords":"Zinc finger; Repressor; Biology; Regulator; Tumor necrosis factor alpha; Immune system; Cell biology; Cold-shock domain; Innate immune system; Transcriptional regulation; Cytokine; Immunology; Gene; Transcription factor; Genetics; RNA","score_opus":0.008363750323206133,"score_gpt":0.21071061261877194,"score_spread":0.2023468622955658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036350098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92539936,0.045421712,0.009647946,0.0028025678,0.00029121933,0.000025597417,0.000621977,0.00040290464,0.015386754],"genre_scores_gemma":[0.9821646,0.0040024393,0.0029605234,0.0003569862,0.000096573654,0.000014071855,0.0005246452,0.000037062873,0.009843043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984956,0.000012992225,0.0000033608355,0.000031681633,0.000051870065,0.00005059486],"domain_scores_gemma":[0.99990857,0.000010945725,0.000018918974,0.0000065985955,0.000012865301,0.00004208938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028242398,0.00030043127,0.0004057828,0.00033396928,0.00043382874,0.0008452184,0.00057314883,0.00046583297,0.0010342224],"category_scores_gemma":[0.00023858811,0.00014472293,0.00020333311,0.0002649755,0.00063382636,0.00047976096,0.00052853,0.00069558236,0.0004665791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072297413,0.000029012028,0.0018748732,0.00010359519,0.00001617088,0.00038257203,0.0000680332,0.0007619325,0.9743413,0.0053736973,0.0018456017,0.014480334],"study_design_scores_gemma":[0.00015181054,0.0003994453,0.05747681,0.00007228975,0.000098704586,0.0032384861,0.00048268304,0.013633431,0.8470977,0.012770948,0.06448974,0.00008796298],"about_ca_topic_score_codex":0.0015350598,"about_ca_topic_score_gemma":0.0017251915,"teacher_disagreement_score":0.0015350598,"about_ca_system_score_codex":0.0010641747,"about_ca_system_score_gemma":0.00043360153,"threshold_uncertainty_score":0.0077211857},"labels":[],"label_agreement":null},{"id":"W2036842751","doi":"10.1038/mi.2009.6","title":"A novel regulatory B-cell population in sheep Peyer's patches spontaneously secretes IL-10 and downregulates TLR9-induced IFNα responses","year":2009,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"TLR9; Immunology; Biology; Immune system; Toll-Like Receptor 9; Peyer's patch; Innate immune system; Population; Cytokine; CpG Oligodeoxynucleotide; CD11c; Interleukin 10; Peripheral blood mononuclear cell; Cell biology; Medicine; Gene expression","score_opus":0.009394017702472312,"score_gpt":0.22082075976488663,"score_spread":0.21142674206241432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036842751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99703026,0.0008147435,0.00089439447,0.00004984872,0.000031458567,0.000019135201,0.00007072065,0.0000337003,0.0010557082],"genre_scores_gemma":[0.99639183,0.00032812214,0.0008942212,0.00006564083,0.00006242458,0.000027989421,0.00022514521,0.00002113385,0.001983327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988174,0.000021029713,0.000010463604,0.0000338118,0.000018222068,0.000034684468],"domain_scores_gemma":[0.99986494,0.00003145254,0.00001634393,0.000026648251,0.000017591594,0.00004293169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018901253,0.00017663512,0.00029470498,0.00021885343,0.00015969311,0.00036422306,0.00021637068,0.00023387857,0.002081445],"category_scores_gemma":[0.00017621592,0.00014423771,0.00017801668,0.00008417293,0.00017052983,0.00015623422,0.00019060732,0.00059194415,0.00078587263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021733677,0.00002812599,0.0006305588,0.000016705962,0.0000027658043,0.00014204699,0.000021156497,0.0000073816987,0.9977715,0.000043497832,0.000027570624,0.0010914834],"study_design_scores_gemma":[0.0002453778,0.0017158777,0.05614098,0.0000313088,0.00013573335,0.0054932074,0.00040905763,0.0016813887,0.92602205,0.00033758036,0.0077683884,0.000018989022],"about_ca_topic_score_codex":0.00017819737,"about_ca_topic_score_gemma":0.00023202707,"teacher_disagreement_score":0.002081445,"about_ca_system_score_codex":0.00009617842,"about_ca_system_score_gemma":0.00008398299,"threshold_uncertainty_score":0.006963134},"labels":[],"label_agreement":null},{"id":"W2037526511","doi":"10.1046/j.1365-2249.2002.01768.x","title":"CD14-dependent and -independent cytokine and chemokine production by human THP-1 monocytes stimulated by<i>Streptococcus suis</i>capsular type 2","year":2002,"lang":"en","type":"article","venue":"Clinical & Experimental Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chemokine; CD14; Immunology; THP1 cell line; Cytokine; Streptococcus suis; Monocyte; Biology; Microbiology; Virology; Immune system; Cell culture; Gene; Genetics","score_opus":0.027727159786413262,"score_gpt":0.3094375973367432,"score_spread":0.28171043755032993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037526511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978089,0.00077292084,0.00039619746,0.000059633778,0.000028738834,0.000037048965,0.0002802892,0.000007880481,0.0006084621],"genre_scores_gemma":[0.994709,0.0010074718,0.0016385429,0.000108738896,0.000051305185,0.00009875271,0.0008998061,0.0000035047256,0.0014828788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997445,0.00007137774,0.00003121955,0.00002441775,0.000046735506,0.00008183303],"domain_scores_gemma":[0.9998598,0.000033130287,0.000025705029,0.000018364826,0.000035718473,0.000027173777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020556377,0.00034979073,0.00031106925,0.00017571005,0.00018494127,0.0003087399,0.00009242915,0.00020947166,0.0011634877],"category_scores_gemma":[0.00026333798,0.000184255,0.00027245784,0.0001820452,0.00017090928,0.00012967583,0.00017476283,0.00031017253,0.00045486994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082725723,0.00010381123,0.0018714682,0.000101169404,0.000008922308,0.00026172813,0.00011498858,0.00007726796,0.99475443,0.000039550672,0.000077188124,0.0017623084],"study_design_scores_gemma":[0.00021426383,0.0046361126,0.08492571,0.000045605615,0.00006284404,0.0012745758,0.00041299567,0.001819305,0.9031248,0.00012031748,0.0033347122,0.00002876252],"about_ca_topic_score_codex":0.0006124702,"about_ca_topic_score_gemma":0.0008962226,"teacher_disagreement_score":0.0011634877,"about_ca_system_score_codex":0.00016228936,"about_ca_system_score_gemma":0.00025078238,"threshold_uncertainty_score":0.003892243},"labels":[],"label_agreement":null},{"id":"W2037565352","doi":"10.1111/j.1462-5822.2007.01071.x","title":"MyD88 signalling plays a critical role in host defence by controlling pathogen burden and promoting epithelial cell homeostasis during Citrobacter rodentium-induced colitis","year":2007,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"University of British Columbia","keywords":"Citrobacter rodentium; Biology; Immunology; Colitis; Innate immune system; Immune system; Microbiology; Pathogen; Citrobacter; Enterobacteriaceae","score_opus":0.005010474199163333,"score_gpt":0.20153345721214955,"score_spread":0.1965229830129862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037565352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969126,0.001513788,0.001068302,0.0000859484,0.000006793254,0.000008219266,0.000053246957,0.00003067152,0.00032048358],"genre_scores_gemma":[0.9979668,0.0005337095,0.000956097,0.000030726096,0.0000050409008,0.000011395305,0.000071561146,0.0000052418523,0.00041944618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984,0.000042796542,0.000014489451,0.00002113614,0.000025722446,0.000055739492],"domain_scores_gemma":[0.9998877,0.000011050127,0.000044539316,0.000012701334,0.0000105984645,0.0000333537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022659116,0.00039386668,0.00021743432,0.0001951621,0.0001279379,0.00022377986,0.00016015624,0.0003815548,0.00064732454],"category_scores_gemma":[0.0001812459,0.00015504105,0.00012829009,0.00007005511,0.00033566056,0.00031031275,0.00020709788,0.0004431031,0.0002023593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035451166,0.00001952298,0.00066345,0.00004171004,0.0000015043713,0.000100332945,0.000017223712,0.000047876925,0.9971123,0.000077599936,0.000023679468,0.0015403139],"study_design_scores_gemma":[0.00006179349,0.00096452783,0.0299304,0.000030604006,0.00002381904,0.0015840029,0.00012791828,0.0010248072,0.9643936,0.00020392177,0.001647914,0.000006804812],"about_ca_topic_score_codex":0.00008927158,"about_ca_topic_score_gemma":0.0001197137,"teacher_disagreement_score":0.00064732454,"about_ca_system_score_codex":0.00023266287,"about_ca_system_score_gemma":0.00012086208,"threshold_uncertainty_score":0.002165556},"labels":[],"label_agreement":null},{"id":"W2037594336","doi":"10.1021/tx400232s","title":"Identification of Danger Signals in Nevirapine-Induced Skin Rash","year":2013,"lang":"en","type":"article","venue":"Chemical Research in Toxicology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Inflammasome; Chemistry; Rash; Reactive intermediate; Biochemistry; Medicine","score_opus":0.05960930000898609,"score_gpt":0.3677804619482003,"score_spread":0.30817116193921423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037594336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9835401,0.010702011,0.002066048,0.00016092217,0.00006256567,0.00011861538,0.0007125297,0.00009756366,0.002539605],"genre_scores_gemma":[0.9858046,0.0063348534,0.0038512566,0.00016803324,0.00005019137,0.00011884971,0.0011448478,0.000010474171,0.0025168417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998379,0.000028643917,0.000012820226,0.000027681155,0.000058649144,0.000034227363],"domain_scores_gemma":[0.9998858,0.00001683366,0.00004353288,0.000005970063,0.000023830178,0.000024055293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012139571,0.00028913136,0.00025265676,0.00091592304,0.00017095526,0.00027704213,0.000092341055,0.0002913109,0.0012620505],"category_scores_gemma":[0.00018238834,0.00014139558,0.00037009738,0.0003276705,0.00013589968,0.00019251401,0.00022276017,0.0004340999,0.00023540926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056964596,0.0000778773,0.0086183315,0.0002735392,0.000025917529,0.00055939006,0.00006083053,0.00006645348,0.9795345,0.00007782792,0.00009578121,0.010039958],"study_design_scores_gemma":[0.00006559562,0.0015054451,0.4473619,0.00012569201,0.00014826235,0.0035799851,0.000715101,0.0019676995,0.53724325,0.0004491363,0.006805888,0.000032061136],"about_ca_topic_score_codex":0.0002978403,"about_ca_topic_score_gemma":0.0004905891,"teacher_disagreement_score":0.0012620505,"about_ca_system_score_codex":0.00020848136,"about_ca_system_score_gemma":0.00014631405,"threshold_uncertainty_score":0.004221916},"labels":[],"label_agreement":null},{"id":"W2037802239","doi":"10.1111/j.1365-2222.2006.02370.x","title":"Signal transducer and activator of transcription 6 down‐regulates toll‐like receptor‐4 expression of a monocytic cell line","year":2006,"lang":"en","type":"article","venue":"Clinical & Experimental Allergy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada)","funders":"","keywords":"TLR4; Toll-like receptor; STAT protein; Molecular biology; Transfection; Biology; Receptor; STAT6; Lipopolysaccharide; Transcription factor; Signal transduction; Cell biology; STAT3; Cell culture; Innate immune system; Immunology; Interleukin 4; Cytokine; Biochemistry; Gene","score_opus":0.01789732447604036,"score_gpt":0.279606648797725,"score_spread":0.26170932432168464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037802239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96880955,0.006737863,0.012914348,0.0005224737,0.00040797715,0.00019624947,0.005278089,0.00032354094,0.0048098215],"genre_scores_gemma":[0.96202147,0.0045639696,0.014306053,0.00031322235,0.00012916727,0.00034564975,0.007765803,0.00007747652,0.010477068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994925,0.00006275186,0.00007194557,0.00007310782,0.00018040549,0.00011923245],"domain_scores_gemma":[0.9998381,0.000030348074,0.000028497496,0.000030820545,0.000042843458,0.000029468805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021430766,0.00046797062,0.00049802696,0.00031009005,0.0003099396,0.00046849909,0.00021898515,0.00025286857,0.0034058027],"category_scores_gemma":[0.00014256244,0.00024032943,0.00050820905,0.0005193534,0.00022452253,0.00017203449,0.00021414118,0.0010549618,0.0022165405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019658997,0.00006320576,0.0002124333,0.00006326082,0.0000072647435,0.00007380826,0.000025442367,0.0000441788,0.9980527,0.000075059,0.00017233341,0.0010137542],"study_design_scores_gemma":[0.0001156386,0.0006230149,0.006425026,0.00002079216,0.00004686873,0.00036821928,0.00007005252,0.0016884397,0.9780253,0.00008280364,0.012522548,0.000011231623],"about_ca_topic_score_codex":0.000840249,"about_ca_topic_score_gemma":0.0007883989,"teacher_disagreement_score":0.0034058027,"about_ca_system_score_codex":0.00035652323,"about_ca_system_score_gemma":0.0003966886,"threshold_uncertainty_score":0.011393547},"labels":[],"label_agreement":null},{"id":"W2037863616","doi":"10.1111/j.1365-2567.2004.01923.x","title":"Enteroaggregative <i>Escherichia coli</i> flagellin‐induced interleukin‐8 secretion requires Toll‐like receptor 5‐dependent p38 MAP kinase activation","year":2004,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"TLR5; Flagellin; Biology; Secretion; Microbiology; MAPK/ERK pathway; p38 mitogen-activated protein kinases; Enteroaggregative Escherichia coli; Toll-like receptor; Interleukin 8; Kinase; Cell biology; TLR2; Signal transduction; Receptor; Escherichia coli; Immune system; TLR4; Cytokine; Innate immune system; Immunology; Enterobacteriaceae; Biochemistry; Gene","score_opus":0.012073798268026046,"score_gpt":0.233588489342345,"score_spread":0.22151469107431895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037863616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9948213,0.0009899334,0.001916099,0.0001138805,0.000037284877,0.000037932394,0.00057157583,0.0000617507,0.0014502383],"genre_scores_gemma":[0.9932902,0.0006867703,0.002174597,0.00010006423,0.00002362499,0.000060066057,0.0018166268,0.000014408006,0.0018335972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997956,0.00003339347,0.000021265649,0.00003223563,0.000038016562,0.00007956126],"domain_scores_gemma":[0.99991286,0.000014880415,0.000028577575,0.000009613329,0.0000133317735,0.000020709675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013667304,0.00045085573,0.00022909351,0.00012964604,0.00013734927,0.00026052428,0.0001158315,0.0002041031,0.0011719475],"category_scores_gemma":[0.00014321343,0.00013832898,0.00030587136,0.00012522236,0.00015612788,0.00022108329,0.00017944942,0.00040102337,0.0005224374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016686534,0.000027376354,0.00014324894,0.000037135032,0.0000020098817,0.00006193148,0.000012057842,0.000015066584,0.9991001,0.000022775717,0.00003162234,0.00037984803],"study_design_scores_gemma":[0.00004998485,0.00055277976,0.025300918,0.000019864596,0.0000126812865,0.0008251549,0.00009845187,0.001013261,0.9692378,0.000059558304,0.0028210783,0.000008307839],"about_ca_topic_score_codex":0.0003974756,"about_ca_topic_score_gemma":0.0005164839,"teacher_disagreement_score":0.0011719475,"about_ca_system_score_codex":0.00026813263,"about_ca_system_score_gemma":0.00016895309,"threshold_uncertainty_score":0.003920555},"labels":[],"label_agreement":null},{"id":"W2038143978","doi":"10.1038/ni1412","title":"Nod-like proteins in immunity, inflammation and disease","year":2006,"lang":"en","type":"review","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":884,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"NOD1; NOD2; Nod; Innate immune system; NALP3; Biology; Inflammation; Receptor; Immune system; Immunology; Intracellular; Pattern recognition receptor; Cell biology; Immune receptor; Gene; Genetics","score_opus":0.009986664907807785,"score_gpt":0.276450151039046,"score_spread":0.2664634861312382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038143978","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011276139,0.9959363,0.00053049333,0.0005885675,0.0015266578,0.000006156178,0.000015919679,0.00001497548,0.001268099],"genre_scores_gemma":[0.0008719847,0.99398685,0.000719501,0.00049496134,0.0016155444,0.000016920307,0.000052199543,0.000002823544,0.0022392294],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976546,0.000031258456,0.000035698962,0.000034494435,0.0001067921,0.000026238327],"domain_scores_gemma":[0.9996345,0.0001292274,0.0000474563,0.000013554123,0.000113191876,0.00006208812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010601954,0.0012944402,0.0018295672,0.0012247075,0.00033407152,0.0011738793,0.001492769,0.0015200828,0.0027275342],"category_scores_gemma":[0.00096182566,0.0004245601,0.0003257369,0.0018628282,0.00086527294,0.0020827092,0.0010136898,0.0025387516,0.0023956413],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021181085,0.00007758894,0.00015755133,0.007459711,0.00005855023,0.00032316954,0.000041441115,0.00040231127,0.003653286,0.004168187,0.083254375,0.90019196],"study_design_scores_gemma":[0.000037507514,0.000050493778,0.00038278065,0.00095392874,0.00004665958,0.00081388565,0.00004049245,0.000098263736,0.0004223553,0.0021817973,0.9949604,0.000011469568],"about_ca_topic_score_codex":0.00060116284,"about_ca_topic_score_gemma":0.0014132902,"teacher_disagreement_score":0.0027275342,"about_ca_system_score_codex":0.0006944583,"about_ca_system_score_gemma":0.0010466055,"threshold_uncertainty_score":0.009124517},"labels":[],"label_agreement":null},{"id":"W2039194112","doi":"10.1016/j.molimm.2008.09.007","title":"Cigarette smoke attenuation of poly I:C-induced innate antiviral responses in human PBMC is mainly due to inhibition of IFN-β production","year":2008,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Philip Morris International; McMaster University; University of Kentucky","keywords":"Peripheral blood mononuclear cell; Innate immune system; Immunology; Chemistry; Immune system; Biology; In vitro; Biochemistry","score_opus":0.017496373333175292,"score_gpt":0.2530583786274595,"score_spread":0.2355620052942842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039194112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99349207,0.003051003,0.0010567374,0.00009954322,0.00010542244,0.00004434797,0.00042918007,0.000039554197,0.0016821823],"genre_scores_gemma":[0.99493355,0.0012376803,0.00062415673,0.0001014044,0.00006278342,0.000048023543,0.00076024653,0.0000134709435,0.0022187678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998925,0.000026694108,0.000008977566,0.000018748722,0.00001673399,0.000036493617],"domain_scores_gemma":[0.99987173,0.000044010736,0.00001732192,0.000024859686,0.000019032737,0.0000230608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016960745,0.00027616738,0.00027742487,0.00010076684,0.00010750537,0.00026759147,0.00010081373,0.0001782548,0.002848957],"category_scores_gemma":[0.00018482191,0.00012416982,0.0002580716,0.00008426834,0.00013780277,0.000082228864,0.00012251314,0.0006194441,0.00065476494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007712108,0.00008678394,0.0008948865,0.00004493374,0.0000066730036,0.00003868299,0.00001736311,0.000017045655,0.99508166,0.000020064452,0.000049346196,0.0029714971],"study_design_scores_gemma":[0.00011694011,0.0024269698,0.07206929,0.000021932243,0.000051457453,0.00038879426,0.00006097538,0.00035138338,0.922085,0.00005003568,0.002372624,0.0000047029393],"about_ca_topic_score_codex":0.00055121153,"about_ca_topic_score_gemma":0.0006274036,"teacher_disagreement_score":0.002848957,"about_ca_system_score_codex":0.00008226636,"about_ca_system_score_gemma":0.00021228656,"threshold_uncertainty_score":0.009530723},"labels":[],"label_agreement":null},{"id":"W2039253450","doi":"10.1016/s1074-7613(03)00141-9","title":"Identifying the MAGUK Protein Carma-1 as a Central Regulator of Humoral Immune Responses and Atopy by Genome-Wide Mouse Mutagenesis","year":2003,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":297,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Biology; NFAT; Immune system; Regulator; Immunoreceptor tyrosine-based activation motif; Cell biology; Mutagenesis; Signal transduction; Effector; Antigen; Mutant; T-cell receptor; Immunology; T cell; Genetics; Transcription factor; Gene","score_opus":0.01193747128779084,"score_gpt":0.2353824620022992,"score_spread":0.22344499071450835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039253450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.967699,0.00128592,0.026906075,0.00032225018,0.0000791461,0.00011656322,0.00089335616,0.00027732877,0.0024204114],"genre_scores_gemma":[0.98813045,0.00059679867,0.007916597,0.00018240462,0.000016980372,0.00006707559,0.0005925554,0.00012144177,0.0023758383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950457,0.00011496219,0.000042853397,0.0001324344,0.000113987066,0.00009113853],"domain_scores_gemma":[0.999627,0.00013706044,0.000107643515,0.00004505714,0.000023520955,0.00005980075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051129225,0.00056093396,0.0004111863,0.0012090281,0.00037980344,0.00054317655,0.00071190647,0.0007095507,0.002126606],"category_scores_gemma":[0.00033898267,0.00040059316,0.00055504224,0.0003930793,0.0006842988,0.00021344119,0.0006322634,0.0012407416,0.00037605365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021387031,0.00003198168,0.00042184006,0.000023857216,0.000015491916,0.00007909927,0.000017843571,0.00027739975,0.99668604,0.0005977968,0.000043177388,0.0015916555],"study_design_scores_gemma":[0.00009416409,0.00032366824,0.009852623,0.000028294335,0.00015454512,0.0009767255,0.000060680246,0.006386725,0.9770512,0.00039682048,0.0046516513,0.000022956978],"about_ca_topic_score_codex":0.0012036121,"about_ca_topic_score_gemma":0.0029693777,"teacher_disagreement_score":0.002126606,"about_ca_system_score_codex":0.00059821905,"about_ca_system_score_gemma":0.0003731099,"threshold_uncertainty_score":0.007114172},"labels":[],"label_agreement":null},{"id":"W2039582116","doi":"10.1016/s0165-5728(99)00174-5","title":"Superantigen presenting capacity of human astrocytes","year":2000,"lang":"en","type":"article","venue":"Journal of Neuroimmunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; McGill University; Montreal Neurological Institute and Hospital","funders":"Medical Research Council Canada; Multiple Sclerosis Society of Canada","keywords":"Superantigen; Enterotoxin; Biology; Immune system; Toxin; MHC class II; Cell biology; Immunology; T cell; Microbiology; Biochemistry; Gene","score_opus":0.020966413151494053,"score_gpt":0.2474675478302091,"score_spread":0.22650113467871505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039582116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996011,0.0009812856,0.0005504679,0.000041764462,0.000017406299,0.000015730515,0.00022261604,0.00000957883,0.0021501896],"genre_scores_gemma":[0.99590814,0.0009281909,0.00044310573,0.000034111734,0.000023391654,0.000023484461,0.00060821616,0.0000070393944,0.0020243125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998845,0.000037047095,0.000010575552,0.000016569402,0.00002349289,0.00002778549],"domain_scores_gemma":[0.9998616,0.000044484623,0.000008606978,0.000018513858,0.000041262025,0.000025613115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019291771,0.00016987095,0.00015594503,0.00021009933,0.00016526939,0.0002954243,0.00010542646,0.00016939396,0.0018520736],"category_scores_gemma":[0.00030301383,0.000085855536,0.0001617212,0.00018127578,0.000094229144,0.00020150097,0.00020190292,0.0002619824,0.0005391848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008286286,0.000087117245,0.0017926889,0.00009350496,0.000014898773,0.00039011193,0.0002687067,0.000078127065,0.99107504,0.00028211105,0.00008787523,0.0050011533],"study_design_scores_gemma":[0.00023664578,0.003927356,0.07184115,0.000057883357,0.00023479346,0.0060345423,0.0015291581,0.0024022313,0.8966042,0.0015114633,0.015583205,0.00003735677],"about_ca_topic_score_codex":0.0008958691,"about_ca_topic_score_gemma":0.0005902211,"teacher_disagreement_score":0.0018520736,"about_ca_system_score_codex":0.00006141823,"about_ca_system_score_gemma":0.00017638788,"threshold_uncertainty_score":0.0061957836},"labels":[],"label_agreement":null},{"id":"W2039657697","doi":"10.1016/j.immuni.2006.03.020","title":"Human 6-Sulfo LacNAc-Expressing Dendritic Cells Are Principal Producers of Early Interleukin-12 and Are Controlled by Erythrocytes","year":2006,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":177,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Technische Universität Dresden","keywords":"Biology; TLR4; Immune system; Ligand (biochemistry); CD40; Immunology; In vitro; Cell biology; Receptor; Biochemistry; Cytotoxic T cell","score_opus":0.009874913081243792,"score_gpt":0.23046181924516315,"score_spread":0.22058690616391935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039657697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99108887,0.0020617438,0.0028703467,0.00010414024,0.00008028744,0.000046626974,0.0003666238,0.00010386263,0.0032774447],"genre_scores_gemma":[0.9939505,0.0007190154,0.0013071668,0.000042617667,0.00004605507,0.000021476031,0.00058538857,0.000018249884,0.0033095314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997756,0.000048377617,0.000018885921,0.000037176123,0.000051523646,0.000068550704],"domain_scores_gemma":[0.99983025,0.000029670822,0.000036658843,0.000029997445,0.000028125545,0.000045204255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014419042,0.0002819061,0.00021465452,0.00017672425,0.00015588778,0.00050708523,0.00015954884,0.00022203477,0.0028838671],"category_scores_gemma":[0.00028345847,0.00015071622,0.0001796302,0.00012926632,0.0001577756,0.00023007087,0.0002520992,0.000612592,0.0014078604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048571258,0.000042235468,0.0012489255,0.000037077436,0.00000432511,0.00012012287,0.000038497077,0.000031816555,0.9934861,0.00026344936,0.00015398274,0.004087653],"study_design_scores_gemma":[0.00008774874,0.0006401064,0.017702319,0.000011443388,0.00003073662,0.0014646292,0.00012075363,0.0009361633,0.96614444,0.0002599733,0.012590326,0.000011392047],"about_ca_topic_score_codex":0.00017053097,"about_ca_topic_score_gemma":0.00015755054,"teacher_disagreement_score":0.0028838671,"about_ca_system_score_codex":0.00017555179,"about_ca_system_score_gemma":0.00009791305,"threshold_uncertainty_score":0.009647548},"labels":[],"label_agreement":null},{"id":"W2039746230","doi":"10.1186/cc6609","title":"Cecal ligation and perforation, when disrupting proper abscess formation, provides highly reproducible results and has common features with human data","year":2008,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Instituto de Salud Carlos III; Fundação de Amparo à Pesquisa do Estado de São Paulo; Deutscher Akademischer Austauschdienst; Intensive Care Foundation","keywords":"Medicine; Ligation; Sepsis; Perforation; Acute respiratory distress; Lipopolysaccharide; ARDS; Lung; Respiratory distress; Systemic inflammatory response syndrome; Intensive care medicine; Immunology; Anesthesia; Internal medicine","score_opus":0.0642803569885272,"score_gpt":0.3002855579886483,"score_spread":0.23600520100012112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039746230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63707584,0.032027796,0.28864637,0.0020889118,0.002469211,0.0026534395,0.0020293952,0.0025579878,0.03045102],"genre_scores_gemma":[0.90700126,0.013937397,0.066624485,0.00066593604,0.00042730584,0.0015375781,0.002133691,0.00019907732,0.00747325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982481,0.0007330842,0.0002144391,0.0001852465,0.0004247701,0.00019445464],"domain_scores_gemma":[0.997282,0.00059969217,0.0007267683,0.0008486448,0.00026014075,0.00028279514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023342818,0.0008233264,0.0008931626,0.00087202433,0.00046393968,0.0007809552,0.00037680435,0.0007257281,0.005140703],"category_scores_gemma":[0.002860466,0.00025646182,0.00052383833,0.0005951571,0.0013006334,0.00065666845,0.0007879632,0.0008714114,0.002246096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00425487,0.0016160174,0.012733608,0.002374617,0.00016371954,0.003964822,0.00024461886,0.001106945,0.84715754,0.0031411033,0.0051169805,0.11812524],"study_design_scores_gemma":[0.00047432608,0.022855699,0.064498045,0.0005252365,0.00019895441,0.047822643,0.00061113207,0.0018663198,0.79360217,0.0018893443,0.06552068,0.00013545676],"about_ca_topic_score_codex":0.0001997693,"about_ca_topic_score_gemma":0.0004743042,"teacher_disagreement_score":0.005140703,"about_ca_system_score_codex":0.0002104795,"about_ca_system_score_gemma":0.0007026239,"threshold_uncertainty_score":0.01719731},"labels":[],"label_agreement":null},{"id":"W2040024879","doi":"10.1038/ni945","title":"An essential role for NOD1 in host recognition of bacterial peptidoglycan containing diaminopimelic acid","year":2003,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1313,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"NOD1; Peptidoglycan; Diaminopimelic acid; Biology; Innate immune system; Lipopolysaccharide; Nod; Microbiology; NOD2; Biochemistry; Immune system; Immunology; Cell wall; Gene","score_opus":0.005869289748577775,"score_gpt":0.2424818974964493,"score_spread":0.23661260774787152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040024879","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98982304,0.0038999605,0.0029690154,0.00030973807,0.00006597163,0.000017675167,0.00017970854,0.000100529236,0.0026343747],"genre_scores_gemma":[0.99522436,0.0006363785,0.002276652,0.00004767366,0.000016035792,0.000013476422,0.00027539546,0.000016241458,0.0014938496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989974,0.000021601814,0.000009688692,0.000018241331,0.000018527124,0.000032328797],"domain_scores_gemma":[0.99980015,0.00003653851,0.000035981608,0.000025994974,0.000025013573,0.00007630343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026673995,0.00041240203,0.00022921148,0.00020576555,0.00032547273,0.00045607937,0.00036353758,0.0004470999,0.0012657432],"category_scores_gemma":[0.0002589515,0.00023037115,0.00022198564,0.00008856578,0.0003902858,0.0005185545,0.000528937,0.0006226746,0.0005329969],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045091135,0.000018574221,0.00014198557,0.000047385223,0.0000022531756,0.00022514402,0.000011514511,0.00009192798,0.9972506,0.00038918725,0.000059077694,0.0013114281],"study_design_scores_gemma":[0.00003955715,0.00021267917,0.0045297127,0.0000118669295,0.000008792117,0.001057862,0.00006477119,0.0014551951,0.9895342,0.0004047632,0.0026722108,0.000008358096],"about_ca_topic_score_codex":0.00023454448,"about_ca_topic_score_gemma":0.00026966317,"teacher_disagreement_score":0.0012657432,"about_ca_system_score_codex":0.00045386792,"about_ca_system_score_gemma":0.00020796795,"threshold_uncertainty_score":0.004234314},"labels":[],"label_agreement":null},{"id":"W2040569805","doi":"10.1016/j.jaci.2007.12.749","title":"PI3K and p38 MAPK Regulate Induction of Mcl-1 and Survival in Glucocorticoid Treated Human Neutrophils","year":2008,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Glucocorticoid; p38 mitogen-activated protein kinases; Apoptosis; Dexamethasone; PI3K/AKT/mTOR pathway; Inflammation; Transrepression; MAPK/ERK pathway; Glucocorticoid receptor; Cell biology; Biology; Immunology; Pharmacology; Signal transduction; Endocrinology; Gene expression; Biochemistry; Gene","score_opus":0.02852579533148623,"score_gpt":0.291365012111375,"score_spread":0.26283921677988875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040569805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99384296,0.0039549605,0.00061363005,0.00026932356,0.00006366577,0.000030972846,0.0004224871,0.000033320848,0.0007688227],"genre_scores_gemma":[0.99779534,0.0005568647,0.0003305345,0.000048896465,0.00001960904,0.00003144952,0.00031088057,0.000002986042,0.00090351433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996774,0.00007932178,0.000027089367,0.00003301147,0.000065788096,0.00011746018],"domain_scores_gemma":[0.9998777,0.000020826192,0.000026445145,0.000017987473,0.000020211595,0.000036783436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021217323,0.0002004197,0.00025131064,0.00024955688,0.00023273121,0.00038380295,0.00019245087,0.00032889016,0.0024408544],"category_scores_gemma":[0.00029794,0.00012758569,0.00027882893,0.00015955721,0.00025100724,0.00023605794,0.00021576276,0.00050941575,0.00045806088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037180008,0.00009785375,0.0019076399,0.00009273623,0.000016876913,0.00032204657,0.00013444528,0.0000811801,0.98870707,0.00019625653,0.00024976797,0.004476166],"study_design_scores_gemma":[0.00030672926,0.0029400862,0.11959541,0.000035169887,0.00008087273,0.0020478205,0.00070805853,0.0012494323,0.86713827,0.00029127445,0.0055766143,0.000030342606],"about_ca_topic_score_codex":0.0013075168,"about_ca_topic_score_gemma":0.0020892892,"teacher_disagreement_score":0.0024408544,"about_ca_system_score_codex":0.00038756774,"about_ca_system_score_gemma":0.00029102413,"threshold_uncertainty_score":0.008165419},"labels":[],"label_agreement":null},{"id":"W2040733257","doi":"10.1038/nbt1288","title":"An anti-infective peptide that selectively modulates the innate immune response","year":2007,"lang":"en","type":"article","venue":"Nature Biotechnology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":399,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; Inimex Pharmaceuticals (Canada)","funders":"","keywords":"Innate immune system; Chemokine; Salmonella enterica; Biology; Antimicrobial peptides; Microbiology; Effector; Monocyte; Immune system; Regulator; Immunology; Antimicrobial; Salmonella; Gene; Bacteria; Biochemistry","score_opus":0.005086378552623116,"score_gpt":0.24712723154882757,"score_spread":0.24204085299620445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040733257","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9854455,0.0031929875,0.005188635,0.00029602053,0.00030705883,0.000070058566,0.00016780743,0.000082698716,0.0052491035],"genre_scores_gemma":[0.9902311,0.0018007151,0.0045841793,0.00031691405,0.00011059789,0.000041472314,0.00020700927,0.000023646984,0.0026843145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999167,0.000011613307,0.0000046458035,0.000017838287,0.000021146792,0.000028137956],"domain_scores_gemma":[0.9999194,0.00001788245,0.000016350452,0.0000073825354,0.000008547694,0.000030407991],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013025993,0.00036639775,0.00022281264,0.00015735433,0.00013334828,0.0003136963,0.00023357105,0.00040206112,0.0014308909],"category_scores_gemma":[0.00012135868,0.00014062271,0.000136082,0.000099292956,0.00022941263,0.00021826725,0.00017877875,0.0009095524,0.00034643768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011770896,0.000050524704,0.00004830738,0.000026807147,0.0000028477677,0.00004977736,0.0000040823056,0.00007189821,0.99724126,0.00018858856,0.000057063768,0.0021411274],"study_design_scores_gemma":[0.00008946922,0.0008344727,0.0012222533,0.000009933084,0.00002245275,0.00051185064,0.000012270739,0.00067739387,0.9930021,0.00017387304,0.0034370322,0.000006827051],"about_ca_topic_score_codex":0.0001018622,"about_ca_topic_score_gemma":0.00015871126,"teacher_disagreement_score":0.0014308909,"about_ca_system_score_codex":0.00015725891,"about_ca_system_score_gemma":0.00016961408,"threshold_uncertainty_score":0.004786849},"labels":[],"label_agreement":null},{"id":"W2040780231","doi":"10.1016/j.cyto.2009.07.168","title":"CysLT1 expression and function are downregulated during dendritic cell maturation with zymosan: Role of IL-10 and prostaglandins","year":2009,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Zymosan; Function (biology); Cell biology; Expression (computer science); Dendritic cell; Chemistry; Biology; Immunology; Computer science; Biochemistry; Immune system","score_opus":0.002673886188383063,"score_gpt":0.17092515218085577,"score_spread":0.1682512659924727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040780231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960006,0.0020286846,0.00082871394,0.00013738344,0.000035719528,0.000016143103,0.0003169291,0.000027440077,0.00060838315],"genre_scores_gemma":[0.99595696,0.00056356256,0.0007681756,0.000054225864,0.000027266635,0.000035272322,0.0004499173,0.000014580532,0.0021299776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973696,0.000037330083,0.000021877833,0.00004844297,0.00004255759,0.00011272763],"domain_scores_gemma":[0.9997143,0.000039417755,0.000073214054,0.000030822786,0.000047145484,0.000095114956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030649896,0.00028021017,0.0004891078,0.00027823407,0.00026261687,0.00065462454,0.00021369981,0.00047423274,0.001702814],"category_scores_gemma":[0.00036279563,0.00017709855,0.00041192953,0.0002683884,0.00040821623,0.00051828864,0.00023717737,0.000758947,0.0004163542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024598604,0.0000325664,0.0011666076,0.000033715693,0.000006706781,0.00019122366,0.000036736266,0.000020593938,0.9947783,0.00009236325,0.000046953566,0.0011344294],"study_design_scores_gemma":[0.00007276362,0.00036832443,0.06325313,0.000013226658,0.000044957877,0.0007906488,0.00018614452,0.00059473095,0.9328319,0.00018477257,0.0016483824,0.000011132027],"about_ca_topic_score_codex":0.0006871645,"about_ca_topic_score_gemma":0.0007888464,"teacher_disagreement_score":0.001702814,"about_ca_system_score_codex":0.0007249566,"about_ca_system_score_gemma":0.000372938,"threshold_uncertainty_score":0.0056964755},"labels":[],"label_agreement":null},{"id":"W2040822794","doi":"10.1615/critrevimmunol.v29.i4.50","title":"Tyrosine Phosphorylation in Immune Cells: Direct and Indirect Effects on Toll-Like Receptor-Induced Proinflammatory Cytokine Production","year":2009,"lang":"en","type":"review","venue":"Critical Reviews in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Protein tyrosine phosphatase; Tyrosine phosphorylation; Receptor tyrosine kinase; Proto-oncogene tyrosine-protein kinase Src; Cell biology; JAK-STAT signaling pathway; Phosphorylation; ROR1; Signal transduction; Tyrosine kinase; Biology; Proinflammatory cytokine; SH2 domain; Platelet-derived growth factor receptor; Cancer research; Chemistry; Biochemistry; Receptor; Immunology; Inflammation","score_opus":0.026181326849027447,"score_gpt":0.30506512054194573,"score_spread":0.27888379369291827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2040822794","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021569461,0.9985683,0.00012618028,0.000113033515,0.00021332529,0.0000024569702,0.000007716266,0.0000063574353,0.0007468313],"genre_scores_gemma":[0.0011852484,0.99761885,0.0001214217,0.00012451588,0.00021882914,0.0000043321143,0.000015918891,0.0000011993031,0.0007097516],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998461,0.000024430692,0.000019507737,0.000027239983,0.00006253505,0.000020093226],"domain_scores_gemma":[0.99987745,0.000043927455,0.00002140057,0.000004329749,0.00003340015,0.00001941029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038587872,0.0008703678,0.0011974204,0.0010510455,0.00021662275,0.00074353284,0.0007197779,0.001031537,0.0021516075],"category_scores_gemma":[0.00028633274,0.00023074089,0.0003206154,0.0012625554,0.00045445235,0.0010784207,0.00051474874,0.0012420346,0.0027042814],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015452091,0.000071899194,0.00023639362,0.014267018,0.000072007344,0.00054773013,0.00007537537,0.0003532798,0.0206541,0.0043238807,0.025739502,0.9335042],"study_design_scores_gemma":[0.000030770887,0.0001837651,0.0016495911,0.0018659758,0.000090030604,0.0032804958,0.000067675464,0.00009377518,0.0051644524,0.002810294,0.98473614,0.000027043514],"about_ca_topic_score_codex":0.00039068153,"about_ca_topic_score_gemma":0.0005723744,"teacher_disagreement_score":0.0021516075,"about_ca_system_score_codex":0.00055648707,"about_ca_system_score_gemma":0.00042501645,"threshold_uncertainty_score":0.007197857},"labels":[],"label_agreement":null},{"id":"W2041234658","doi":"10.1016/j.cellsig.2008.12.001","title":"Distinct intracellular signaling pathways control the synthesis of IL-8 and RANTES in TLR1/TLR2, TLR3 or NOD1 activated human airway epithelial cells","year":2008,"lang":"en","type":"article","venue":"Cellular Signalling","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"TLR3; Cell biology; MAPK/ERK pathway; TLR2; NOD1; Kinase; p38 mitogen-activated protein kinases; Signal transduction; Biology; Toll-like receptor; TLR4; NOD2; Receptor; Chemistry; Innate immune system; Biochemistry","score_opus":0.014839497151192633,"score_gpt":0.19950166356390953,"score_spread":0.1846621664127169,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041234658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99238765,0.0026820756,0.002147877,0.0001257382,0.000040094088,0.00003204598,0.0007915976,0.00005337786,0.0017396334],"genre_scores_gemma":[0.99454737,0.0007032077,0.0014661145,0.000048206668,0.000022267557,0.00005628626,0.0011580032,0.000016389298,0.0019821485],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963045,0.00007965431,0.0000403844,0.00006364158,0.00005516546,0.00013065107],"domain_scores_gemma":[0.999833,0.00004850115,0.000032401236,0.00002464646,0.000031665582,0.000029767663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028670835,0.00033879446,0.0003441607,0.00028667858,0.00027738838,0.0008048207,0.00013738777,0.0003669929,0.0021855992],"category_scores_gemma":[0.0002347635,0.00017827215,0.0004993032,0.00018465864,0.0002680299,0.0005102769,0.0003172295,0.0005337111,0.0006829704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056659913,0.000018478235,0.00039477003,0.0000351552,0.0000043088226,0.00007697929,0.00003717838,0.000050016533,0.99793774,0.0001660664,0.000023616809,0.0006891205],"study_design_scores_gemma":[0.00005495771,0.0002360441,0.01329278,0.000012924229,0.000024033163,0.0003726959,0.00018363282,0.0011793148,0.98293173,0.00019217795,0.0015085997,0.000011106882],"about_ca_topic_score_codex":0.000449511,"about_ca_topic_score_gemma":0.0005513597,"teacher_disagreement_score":0.0021855992,"about_ca_system_score_codex":0.00034467503,"about_ca_system_score_gemma":0.00027856402,"threshold_uncertainty_score":0.0073115826},"labels":[],"label_agreement":null},{"id":"W2041352944","doi":"10.1016/j.cellimm.2009.10.007","title":"Role of TLR2- and TLR4-mediated signaling in Mycobacterium tuberculosis-induced macrophage death","year":2009,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":122,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Departamento Administrativo de Ciencia, Tecnología e Innovación (COLCIENCIAS)","keywords":"TLR4; TLR2; Apoptosis; Biology; Macrophage; p38 mitogen-activated protein kinases; Necrosis; Signal transduction; Programmed cell death; Toll-like receptor; Mycobacterium tuberculosis; Tuberculosis; MAPK/ERK pathway; Tumor necrosis factor alpha; Cell biology; Microbiology; Immunology; Innate immune system; Immune system; Medicine; Pathology; Genetics","score_opus":0.006176385280084932,"score_gpt":0.20344819616635712,"score_spread":0.1972718108862722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041352944","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9659326,0.018428149,0.00521031,0.0010286245,0.000194262,0.00009230802,0.0006423722,0.00013255226,0.00833891],"genre_scores_gemma":[0.9909977,0.0020241938,0.0019806875,0.00016136117,0.000063071406,0.00008564892,0.00032412438,0.000010285083,0.0043529207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945134,0.00018840723,0.000045894296,0.00003598432,0.00008086295,0.00019754533],"domain_scores_gemma":[0.99976,0.000050746356,0.000056720815,0.000036530146,0.000048814538,0.000047133428],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078120903,0.000644828,0.00041985934,0.00051936577,0.0005849347,0.00075431366,0.00034149928,0.0010493342,0.003172125],"category_scores_gemma":[0.0003457214,0.00024854578,0.0004753185,0.00019827284,0.00042876642,0.0007453351,0.00059251144,0.0009339609,0.0008014208],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005007181,0.00022188248,0.0021313075,0.00033284916,0.000048644248,0.00070678786,0.00007612851,0.00043978554,0.9757587,0.0014532085,0.00040645944,0.013417096],"study_design_scores_gemma":[0.000343398,0.0014260102,0.03239985,0.00008945131,0.00009597712,0.0028272497,0.000352735,0.004121175,0.9475048,0.0022882419,0.008518625,0.000032450054],"about_ca_topic_score_codex":0.00028638652,"about_ca_topic_score_gemma":0.00027534238,"teacher_disagreement_score":0.003172125,"about_ca_system_score_codex":0.0006614714,"about_ca_system_score_gemma":0.00038638446,"threshold_uncertainty_score":0.010611832},"labels":[],"label_agreement":null},{"id":"W2041478559","doi":"10.1074/jbc.m706884200","title":"Secretory Leucocyte Protease Inhibitor Inhibits Interferon-γ-induced Cathepsin S Expression","year":2007,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Science Foundation Ireland; Health Research Board","keywords":"Cathepsin S; Protease; Protease inhibitor (pharmacology); Interferon; Chemistry; Cathepsin; Cell biology; Biology; Virology; Enzyme; Biochemistry; Virus","score_opus":0.022543960721157972,"score_gpt":0.2556478060043038,"score_spread":0.23310384528314584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041478559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99335575,0.004120499,0.001177934,0.00011104109,0.000030659732,0.000027313085,0.00007381442,0.00003455801,0.0010683205],"genre_scores_gemma":[0.99606955,0.0012492466,0.0009560396,0.00004966902,0.00001973204,0.000020983985,0.00022504813,0.000007251885,0.0014024462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990475,0.000025970981,0.000012843774,0.000009412795,0.000017691107,0.000029291608],"domain_scores_gemma":[0.9998969,0.00002897896,0.000028908931,0.000012687963,0.000014084077,0.000018447978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017468951,0.0003250941,0.0003082355,0.00015898148,0.00010023676,0.00026695343,0.00014846626,0.0001579871,0.001021203],"category_scores_gemma":[0.00021545643,0.00008400685,0.00021330162,0.00008577272,0.00018146723,0.00008666519,0.00010392128,0.00038611362,0.00027990338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00076355424,0.00013992815,0.000830615,0.00006477519,0.00001937582,0.00007224306,0.000025987792,0.000041714735,0.99204636,0.00004080476,0.000071167146,0.005883366],"study_design_scores_gemma":[0.00017674148,0.002486557,0.0087392265,0.000014221818,0.00004072741,0.00054166303,0.000036111127,0.0008208812,0.98494256,0.000040771127,0.0021564523,0.0000041554435],"about_ca_topic_score_codex":0.00028322588,"about_ca_topic_score_gemma":0.0005012746,"teacher_disagreement_score":0.001021203,"about_ca_system_score_codex":0.00017396,"about_ca_system_score_gemma":0.00016034876,"threshold_uncertainty_score":0.0034162998},"labels":[],"label_agreement":null},{"id":"W2041561300","doi":"10.1016/j.cyto.2008.04.007","title":"Pro-inflammatory disequilibrium of the IL-1β/IL-1ra ratio in an experimental model of perinatal brain damages induced by lipopolysaccharide and hypoxia–ischemia","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Lipopolysaccharide; Downregulation and upregulation; Inflammation; Brain damage; Agonist; Receptor antagonist; Interleukin 1 receptor antagonist; Receptor; Hypoxia (environmental); Antagonist; Interleukin; Neuroprotection; Medicine; Immunology; Endocrinology; Pharmacology; Cytokine; Internal medicine; Chemistry; Biochemistry","score_opus":0.017905568128174846,"score_gpt":0.2429658000319225,"score_spread":0.22506023190374766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2041561300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99620724,0.0013304597,0.0017051401,0.00012322086,0.0000568899,0.00001771674,0.00010062097,0.000029649364,0.00042906377],"genre_scores_gemma":[0.99570686,0.0012309434,0.0014103121,0.000067412344,0.000043157394,0.00007469271,0.00014480235,0.000022028644,0.0012998446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99961144,0.00007077855,0.000029287372,0.00008162839,0.00007281459,0.00013406275],"domain_scores_gemma":[0.999368,0.000102607075,0.00021343872,0.000077282915,0.000040600793,0.00019805097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045261995,0.00059413636,0.00046492185,0.000662282,0.00025823552,0.00041157907,0.00033010708,0.00030001652,0.0014396604],"category_scores_gemma":[0.00035412004,0.0003166201,0.00020247298,0.00027546787,0.00096846715,0.0004406556,0.000257218,0.001575839,0.00014053639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004693983,0.00026506325,0.00077056594,0.0000563818,0.000014851871,0.00034222138,0.000091098205,0.00005716061,0.9913641,0.00034853173,0.000050336996,0.001945612],"study_design_scores_gemma":[0.0000711564,0.001228422,0.006065064,0.000011610402,0.00005951511,0.00045661008,0.00015911311,0.00041509036,0.9909416,0.00014060926,0.00044200828,0.000009270154],"about_ca_topic_score_codex":0.00061050063,"about_ca_topic_score_gemma":0.00088044896,"teacher_disagreement_score":0.0014396604,"about_ca_system_score_codex":0.00043326625,"about_ca_system_score_gemma":0.00050747936,"threshold_uncertainty_score":0.0048161745},"labels":[],"label_agreement":null},{"id":"W2042259472","doi":"10.1158/1538-7445.pedcan-b33","title":"Abstract B33: Toll-like receptor ligands delay acute lymphoblastic leukemia onset via depletion of pre-leukemic cells","year":2014,"lang":"en","type":"article","venue":"Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Leukemia; Immunology; Receptor; Population; Immune system; Cancer research; Toll-like receptor; Splenocyte; Cancer; Acute leukemia; Biology; Medicine; Innate immune system; Internal medicine","score_opus":0.017105050636802555,"score_gpt":0.30478673912991133,"score_spread":0.28768168849310877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042259472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99532324,0.0013352915,0.001227855,0.00011075943,0.000039027775,0.000045549048,0.00054608507,0.00015252635,0.001219568],"genre_scores_gemma":[0.9926224,0.0008124568,0.0020744044,0.00009595644,0.00002132055,0.00007394051,0.0007379328,0.000035933597,0.0035256445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998017,0.000051478426,0.00001950094,0.000027982944,0.000042244646,0.000057172972],"domain_scores_gemma":[0.9998105,0.00004384324,0.000050029696,0.000017233599,0.000013906079,0.00006444299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017617476,0.00045500655,0.00027800843,0.000299419,0.00008980582,0.00027621633,0.00023503877,0.0003115937,0.0021225873],"category_scores_gemma":[0.00016038102,0.00017173457,0.00016655221,0.00013365252,0.00020345568,0.00019285352,0.00020552262,0.0010147938,0.0007496175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004673895,0.00011804448,0.00016108538,0.000034745746,0.0000028777213,0.000036163055,0.000014658956,0.0000406724,0.99762803,0.000059882652,0.00005686459,0.0013796588],"study_design_scores_gemma":[0.00007477243,0.002624269,0.004600139,0.000012336177,0.000013098722,0.00024739196,0.00003276097,0.0004993496,0.98991966,0.00004232612,0.0019295923,0.0000042343413],"about_ca_topic_score_codex":0.0002998235,"about_ca_topic_score_gemma":0.0005938635,"teacher_disagreement_score":0.0021225873,"about_ca_system_score_codex":0.00016424402,"about_ca_system_score_gemma":0.00016714212,"threshold_uncertainty_score":0.007100761},"labels":[],"label_agreement":null},{"id":"W2042329838","doi":"10.1016/j.cellimm.2005.06.003","title":"Erratum to “Polarization and directed migration of murine neutrophils is dependent on cell-surface expression of CD44” [Cell. Immunol. 231 (2004) 146–157]","year":2005,"lang":"en","type":"erratum","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"CD44; Immunology; Library science; Medicine; Molecular biology; Biology; Cell; Genetics; Computer science","score_opus":0.005442025495634821,"score_gpt":0.20200562590119908,"score_spread":0.19656360040556425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042329838","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003548099,0.002478005,0.00050919555,0.018715486,0.97367316,0.000043715114,0.0005492118,0.000157874,0.003518524],"genre_scores_gemma":[0.017474666,0.044236112,0.008572858,0.10567135,0.4430254,0.00041166024,0.008379152,0.001097703,0.37113106],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970849,0.00036018153,0.0007050334,0.0003056965,0.0012644237,0.00027966866],"domain_scores_gemma":[0.99091595,0.0021273275,0.0008540668,0.0006023245,0.00481997,0.00068031804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024865875,0.003876306,0.0029308675,0.005203066,0.00390367,0.002632892,0.0035790575,0.0060170842,0.029129056],"category_scores_gemma":[0.015939731,0.0020453085,0.0025171991,0.0026341071,0.0024105406,0.0023939644,0.0015418408,0.006580205,0.03167801],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020159694,0.000039210554,0.00013266531,0.00040236017,0.000043597025,0.0009556472,0.000026988628,0.00011072694,0.00059536524,0.00069860753,0.98558897,0.011204216],"study_design_scores_gemma":[0.00009870109,0.00012195365,0.00237556,0.00044826968,0.00014364185,0.0010326719,0.00008941731,0.00030823788,0.0020946455,0.00088941015,0.99231917,0.00007825962],"about_ca_topic_score_codex":0.009484298,"about_ca_topic_score_gemma":0.013591609,"teacher_disagreement_score":0.029129056,"about_ca_system_score_codex":0.0031499115,"about_ca_system_score_gemma":0.0038305868,"threshold_uncertainty_score":0.09744638},"labels":[],"label_agreement":null},{"id":"W2042374244","doi":"10.1371/journal.pone.0061326","title":"A Non-Synonymous Coding Variant (L616F) in the TLR5 Gene Is Potentially Associated with Crohn's Disease and Influences Responses to Bacterial Flagellin","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine; Children's Hospital of Eastern Ontario; University of British Columbia Hospital","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research","keywords":"Single-nucleotide polymorphism; TLR5; Flagellin; Biology; Genetics; Linkage disequilibrium; Haplotype; Genome-wide association study; SNP; Allele; ATG16L1; Gene; Genotype","score_opus":0.018754596249779206,"score_gpt":0.20706611315408505,"score_spread":0.18831151690430584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042374244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982596,0.00052180496,0.0007065952,0.000064215645,0.000016797372,0.000011076475,0.00018745517,0.000009436555,0.00022306778],"genre_scores_gemma":[0.99903667,0.000058867652,0.0005445245,0.00004280471,0.000013282189,0.0000065060044,0.00013666844,0.0000029260218,0.00015769569],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994997,0.00014417288,0.00007339623,0.00017212746,0.000056232948,0.00005437108],"domain_scores_gemma":[0.99923015,0.00036649682,0.00022507452,0.00004188314,0.000041949825,0.00009441834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066651555,0.0004440727,0.00041899993,0.0005128403,0.0005325003,0.00033523887,0.0002468753,0.0009267159,0.003245001],"category_scores_gemma":[0.0010292586,0.00015118775,0.0005278222,0.00053698226,0.00033545838,0.00014204124,0.00025064638,0.0003568512,0.0003086875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004858574,0.00028048037,0.84916335,0.00023394685,0.0005406999,0.0053913333,0.00037825675,0.0004142955,0.122723706,0.00032376518,0.00036418322,0.015327299],"study_design_scores_gemma":[0.00019571038,0.0012155081,0.9803058,0.00006736982,0.00039319956,0.008043778,0.00018063556,0.0013175518,0.0069259214,0.00031889495,0.0010125507,0.000023097018],"about_ca_topic_score_codex":0.0011062478,"about_ca_topic_score_gemma":0.0014944082,"teacher_disagreement_score":0.003245001,"about_ca_system_score_codex":0.00017550711,"about_ca_system_score_gemma":0.0001460676,"threshold_uncertainty_score":0.010855615},"labels":[],"label_agreement":null},{"id":"W2042458819","doi":"10.1002/eji.200737393","title":"RIP2 contributes to Nod signaling but is not essential for T cell proliferation, T helper differentiation or TLR responses","year":2007,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Nod; Innate immune system; Cell biology; Biology; Acquired immune system; Signal transduction; T cell; Inflammasome; Immunology; Immune system; Inflammation; Genetics","score_opus":0.015146057893760112,"score_gpt":0.25177550647024705,"score_spread":0.23662944857648693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042458819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98528904,0.0039022877,0.00516628,0.000275047,0.00008472169,0.000030057377,0.0010664171,0.00030628074,0.0038799092],"genre_scores_gemma":[0.99206007,0.00095757085,0.0022107663,0.00007381079,0.000031633535,0.000034456032,0.001600499,0.0000873814,0.0029439293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996494,0.000075662996,0.000046419646,0.00007376872,0.000073044655,0.00008164721],"domain_scores_gemma":[0.9994993,0.000080247846,0.00012945809,0.000102610284,0.000039497663,0.00014886969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003170986,0.0008195736,0.00042460987,0.00036245977,0.00022093895,0.0006888479,0.00045831248,0.00064293854,0.0028709138],"category_scores_gemma":[0.00038918012,0.00029412817,0.0004286338,0.0001887226,0.0003954076,0.0005805115,0.0005827042,0.00093736284,0.001561741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025102438,0.0000217255,0.000381367,0.00007788842,0.000006600896,0.00026974193,0.000007353943,0.00004524845,0.9978485,0.00012384693,0.00006180927,0.0009050795],"study_design_scores_gemma":[0.00006610404,0.0002575862,0.012466721,0.00002367036,0.000055708726,0.003395365,0.00006650709,0.0014650514,0.9757888,0.00025645547,0.0061408253,0.000017337867],"about_ca_topic_score_codex":0.00014205722,"about_ca_topic_score_gemma":0.00015613638,"teacher_disagreement_score":0.0028709138,"about_ca_system_score_codex":0.00025099024,"about_ca_system_score_gemma":0.00026811374,"threshold_uncertainty_score":0.009604156},"labels":[],"label_agreement":null},{"id":"W2042685802","doi":"10.1159/000381265","title":"&lt;b&gt;&lt;i&gt;VPS13D&lt;/i&gt;&lt;/b&gt; Gene Variant Is Associated with Altered IL-6 Production and Mortality in Septic Shock","year":2015,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; National Sanitarium Association","keywords":"Genome-wide association study; Septic shock; Biology; Genotype; Allele; Locus (genetics); Genetic association; Genetics; Gene; Molecular biology; Immunology; Single-nucleotide polymorphism; Sepsis","score_opus":0.02152469623661576,"score_gpt":0.24944230636356676,"score_spread":0.227917610126951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042685802","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99650586,0.0003784082,0.0009358925,0.00013577405,0.000031743555,0.000010121167,0.0015205117,0.000030432368,0.00045126304],"genre_scores_gemma":[0.9978922,0.00013404869,0.0006188553,0.00008599947,0.00002058383,0.000015595922,0.0007411716,0.000021045611,0.00047051546],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997869,0.00004147731,0.000026985836,0.00009147179,0.000028209559,0.000024984205],"domain_scores_gemma":[0.99962497,0.00008747024,0.00016956094,0.000036830577,0.00002104118,0.00006003056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002839413,0.00053585763,0.00027606366,0.00040087887,0.000233225,0.00037493624,0.0002551808,0.00050681946,0.0033859452],"category_scores_gemma":[0.00066251616,0.00021659135,0.00051130593,0.0007132568,0.00030156737,0.00011012064,0.00022276632,0.00048068218,0.0004252116],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01037365,0.0002141116,0.7176658,0.0002738359,0.0011897363,0.003586108,0.00026943907,0.0016384652,0.2442417,0.00058949064,0.0027974674,0.017160226],"study_design_scores_gemma":[0.00042258663,0.00060766126,0.97037953,0.000060294875,0.0009183202,0.0047446876,0.00013265738,0.0023456614,0.016947491,0.0007491731,0.002657871,0.00003413021],"about_ca_topic_score_codex":0.0015918799,"about_ca_topic_score_gemma":0.001652059,"teacher_disagreement_score":0.0033859452,"about_ca_system_score_codex":0.00018021332,"about_ca_system_score_gemma":0.00015355536,"threshold_uncertainty_score":0.011327088},"labels":[],"label_agreement":null},{"id":"W2042728718","doi":"10.1038/nm.2306","title":"Alum interaction with dendritic cell membrane lipids is essential for its adjuvanticity","year":2011,"lang":"en","type":"article","venue":"Nature Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":405,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Calgary","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Alum; Cell biology; Inflammasome; Chemistry; Immune system; Dendritic cell; Adjuvant; Cell adhesion molecule; Receptor; Biology; Biochemistry; Immunology","score_opus":0.012590858457584427,"score_gpt":0.25601592758965425,"score_spread":0.24342506913206982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042728718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9793053,0.0050114393,0.008486414,0.0007150037,0.0002353101,0.00009031854,0.0004115749,0.00017396176,0.005570555],"genre_scores_gemma":[0.99236614,0.0012465941,0.0025596214,0.000119356206,0.00003977283,0.000031648004,0.00037922393,0.000040766878,0.003216945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997296,0.00006211162,0.000019735162,0.000033414766,0.00007393861,0.00008118617],"domain_scores_gemma":[0.9996917,0.00006938741,0.00007206375,0.000042319913,0.000060319562,0.00006419012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028600535,0.00053255557,0.0002676841,0.00019659067,0.00032241098,0.0006811536,0.00020805502,0.00050863577,0.0026971316],"category_scores_gemma":[0.0005308459,0.00021267109,0.00030180608,0.00011600493,0.00028391558,0.0004128906,0.00061683194,0.000822919,0.0017281454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003318,0.000025392856,0.00028399582,0.00004048092,0.0000042970223,0.0000648067,0.000009098011,0.000042166743,0.99727964,0.0002542095,0.00006506277,0.0015990365],"study_design_scores_gemma":[0.000026738615,0.00016656423,0.001841491,0.000009309719,0.000010363559,0.00017138297,0.000027170152,0.0003057132,0.99494886,0.00019985896,0.0022880405,0.0000045927795],"about_ca_topic_score_codex":0.0003163449,"about_ca_topic_score_gemma":0.00033967223,"teacher_disagreement_score":0.0026971316,"about_ca_system_score_codex":0.00033433756,"about_ca_system_score_gemma":0.00050153007,"threshold_uncertainty_score":0.009022832},"labels":[],"label_agreement":null},{"id":"W2042962853","doi":"10.1016/j.dci.2014.03.022","title":"The porcine innate immune system: An update","year":2014,"lang":"en","type":"review","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":273,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Innate immune system; Immune system; Biology; Disease; Animal model; Key (lock); Neuroscience; Immunology; Medicine; Pathology; Ecology","score_opus":0.03894822318023609,"score_gpt":0.3193985042358326,"score_spread":0.2804502810555965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2042962853","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014782541,0.99770856,0.00019325077,0.00036151975,0.0008082274,0.000005180524,0.000039452356,0.000011154272,0.0007248608],"genre_scores_gemma":[0.0005895889,0.99696404,0.00029836086,0.00040498265,0.000980109,0.0000071662103,0.000078972145,0.0000023747186,0.0006744312],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976426,0.000033607623,0.000043098873,0.00005012815,0.00007867237,0.000030161438],"domain_scores_gemma":[0.9992495,0.00029978438,0.00012316932,0.000020650903,0.00018533156,0.00012152984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012719319,0.0013107057,0.0018833464,0.0030194647,0.00030227663,0.002183112,0.0012048463,0.0017923582,0.005026558],"category_scores_gemma":[0.0010990865,0.00046041122,0.0005580314,0.0023457634,0.00072080054,0.0025896255,0.0012366694,0.0021927424,0.0024255707],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020147774,0.00008986064,0.0003874743,0.014402522,0.0000987864,0.0004741245,0.000054111842,0.00026130336,0.0030550635,0.0013476135,0.051794898,0.92783284],"study_design_scores_gemma":[0.000042377735,0.00019700512,0.0011943349,0.0038856112,0.00024698811,0.0022093817,0.00008548455,0.00010565179,0.00053098437,0.00091538305,0.99055135,0.00003544566],"about_ca_topic_score_codex":0.0010040696,"about_ca_topic_score_gemma":0.0019505296,"teacher_disagreement_score":0.005026558,"about_ca_system_score_codex":0.0007354895,"about_ca_system_score_gemma":0.0019557425,"threshold_uncertainty_score":0.016815484},"labels":[],"label_agreement":null},{"id":"W2043367837","doi":"10.1016/j.jneuroim.2004.10.015","title":"Toll-like receptors on astrocytes: patterning for immunity","year":2004,"lang":"en","type":"review","venue":"Journal of Neuroimmunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"","keywords":"Innate immune system; Biology; Pattern recognition receptor; TLR2; Acquired immune system; Immune system; Pathogen-associated molecular pattern; Toll-like receptor; TLR9; TLR3; Chemokine; Immunology; TLR4; TLR7; Receptor; Interferon; Cell biology; Gene; Gene expression; Genetics","score_opus":0.04828758012148679,"score_gpt":0.3194837956646269,"score_spread":0.2711962155431401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043367837","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028906768,0.9954945,0.0006618167,0.00058751815,0.00086457876,0.0000048090296,0.000024749463,0.000014927992,0.0020579335],"genre_scores_gemma":[0.0014846444,0.9941345,0.0007576233,0.00037949233,0.0006464546,0.000008128707,0.000051422317,0.0000028689872,0.0025349045],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984825,0.000017546163,0.000025009625,0.000035635243,0.000054112,0.000019382902],"domain_scores_gemma":[0.9997012,0.000101182675,0.000037905815,0.00001474386,0.00010338043,0.000041627107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071943697,0.001067225,0.0012340812,0.0013751149,0.0003030323,0.0013998309,0.001283297,0.0017793492,0.0026170898],"category_scores_gemma":[0.0004854047,0.00034121113,0.00028259255,0.001621746,0.00087466935,0.002027091,0.00063715235,0.001980283,0.0027512687],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015739097,0.00004458105,0.00022605821,0.0054034702,0.0000393848,0.00042954602,0.00007359144,0.00044620928,0.013166125,0.006310158,0.03612599,0.9375776],"study_design_scores_gemma":[0.000023797445,0.00005391462,0.0007876075,0.001202827,0.000050975574,0.001658893,0.0001154057,0.00009884192,0.0023675447,0.0034255646,0.9901922,0.000022435039],"about_ca_topic_score_codex":0.0007082549,"about_ca_topic_score_gemma":0.0018975765,"teacher_disagreement_score":0.0026170898,"about_ca_system_score_codex":0.00080539257,"about_ca_system_score_gemma":0.0008412532,"threshold_uncertainty_score":0.008755028},"labels":[],"label_agreement":null},{"id":"W2043999480","doi":"10.1002/ibd.20379","title":"Intestinal epithelial barrier dysfunction and dendritic cell redistribution during early stages of inflammation in the rat: Role for TLR-2 and -4 blockage","year":2008,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Inflammation; Immunology; Cell biology; Redistribution (election); Biology; Chemistry; Medicine","score_opus":0.005603931380330423,"score_gpt":0.1988928826957485,"score_spread":0.1932889513154181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043999480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678576,0.0018361146,0.0007023245,0.00009038487,0.0000308209,0.000031564014,0.00015801135,0.00005782651,0.00030728642],"genre_scores_gemma":[0.99539846,0.0013126238,0.0011263351,0.00006251205,0.000030059871,0.000081218335,0.0003117291,0.000010925864,0.0016662243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982566,0.000022339267,0.00001288201,0.00003473489,0.000029908215,0.00007448305],"domain_scores_gemma":[0.99954295,0.000036259225,0.00016284543,0.00005202222,0.000037749607,0.00016817132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002634339,0.00074281817,0.0005541758,0.0006786356,0.00024098223,0.00030243633,0.0002746201,0.00063342846,0.0018297858],"category_scores_gemma":[0.00018481028,0.00040695776,0.00058256375,0.00022710311,0.00056451646,0.0005319062,0.00022453986,0.0015450801,0.00051004905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005728493,0.00069895264,0.0023828987,0.00011730705,0.0000150767,0.00041139926,0.000044354743,0.000073758136,0.9878444,0.000046358484,0.000059051374,0.0025780494],"study_design_scores_gemma":[0.00027196074,0.014600096,0.050392304,0.000036842444,0.0001299745,0.0014983984,0.00020604403,0.0008643047,0.9306888,0.000091158094,0.0011939133,0.00002612356],"about_ca_topic_score_codex":0.0005067591,"about_ca_topic_score_gemma":0.0007960959,"teacher_disagreement_score":0.0018297858,"about_ca_system_score_codex":0.0004263513,"about_ca_system_score_gemma":0.00036819576,"threshold_uncertainty_score":0.006121218},"labels":[],"label_agreement":null},{"id":"W2044235450","doi":"10.3791/2551","title":"Intravital Microscopy of the Inguinal Lymph Node","year":2011,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"Canadian Institutes of Health Research; Centre for Blood Research, University of British Columbia; University of British Columbia","keywords":"Immune system; High endothelial venules; Lymph; Arteriole; Lymph node; Acquired immune system; Cell biology; Immunology; Biology; Dendritic cell; Venule; Medicine; Microcirculation; Pathology; Internal medicine","score_opus":0.02583738637662875,"score_gpt":0.3701009438110262,"score_spread":0.34426355743439746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044235450","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68927205,0.028871085,0.21680942,0.0033782364,0.0013255556,0.00091039226,0.006566531,0.0025568304,0.05030997],"genre_scores_gemma":[0.7676471,0.009645195,0.19012773,0.001462708,0.00022113259,0.0007565082,0.0022185354,0.0002960083,0.027625145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997936,0.000025976417,0.000011390694,0.000057061225,0.0000380431,0.00007398532],"domain_scores_gemma":[0.9998273,0.000052961037,0.000022422824,0.000018210498,0.000046391306,0.0000327405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040780706,0.0003823812,0.00019569746,0.0008041974,0.00046044195,0.00046912965,0.0004434701,0.0010803625,0.0030365675],"category_scores_gemma":[0.00018211361,0.00028159155,0.00037074447,0.0003162104,0.00030682524,0.00035612067,0.0004771511,0.0011684635,0.00086794666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010214116,0.000106123734,0.0012068506,0.0002682283,0.000021607997,0.00087662454,0.00012882665,0.0006632208,0.9846118,0.0021781065,0.00092154386,0.008914996],"study_design_scores_gemma":[0.00009923367,0.0015036552,0.047146626,0.0004404343,0.00018103526,0.008667767,0.0005811577,0.028975304,0.82244164,0.002101858,0.0877551,0.00010631212],"about_ca_topic_score_codex":0.003112557,"about_ca_topic_score_gemma":0.0040284083,"teacher_disagreement_score":0.003112557,"about_ca_system_score_codex":0.0006027596,"about_ca_system_score_gemma":0.0006897085,"threshold_uncertainty_score":0.0101583},"labels":[],"label_agreement":null},{"id":"W2044864865","doi":"10.1097/01.ccm.0000284511.73556.59","title":"A CXCL2 polymorphism is associated with better outcomes in patients with severe sepsis*","year":2007,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Medicine; Systemic inflammatory response syndrome; Sepsis; Internal medicine; Septic shock; ARDS; APACHE II; Population; Intensive care; Odds ratio; Intensive care medicine; Intensive care unit; Lung","score_opus":0.007788142169287143,"score_gpt":0.25352124808005705,"score_spread":0.2457331059107699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2044864865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999328,0.00018661232,0.000105229235,0.00008626065,0.000009587861,0.0000027056342,0.00011180376,0.0000033943895,0.00016644166],"genre_scores_gemma":[0.99953043,0.00006000291,0.00011896188,0.000029961353,0.0000275062,0.0000042016623,0.00012479539,0.0000020393154,0.00010209477],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973017,0.00009979039,0.000026499403,0.00006207464,0.000037417936,0.000044048465],"domain_scores_gemma":[0.99856466,0.00040529642,0.0005673697,0.000073440315,0.00010683741,0.000282442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041520572,0.00041047842,0.00036246912,0.00037321326,0.00028948966,0.00024660665,0.00018064168,0.00057595456,0.002717101],"category_scores_gemma":[0.0015176233,0.00011219857,0.00030722332,0.00050482,0.00028172822,0.00015509294,0.00020235621,0.0005128285,0.00022848664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055695185,0.000042426196,0.99639565,0.00001666054,0.00007188014,0.00020055332,0.00002692307,0.00006324976,0.0014037411,0.00001356615,0.00011894716,0.0010894581],"study_design_scores_gemma":[0.000030512829,0.00024125449,0.9981748,0.000009301964,0.000050682662,0.0007968448,0.00005524448,0.00032453693,0.00013003252,0.000053614276,0.0001289629,0.0000042629918],"about_ca_topic_score_codex":0.0010022809,"about_ca_topic_score_gemma":0.0008143329,"teacher_disagreement_score":0.002717101,"about_ca_system_score_codex":0.00010213658,"about_ca_system_score_gemma":0.00023607841,"threshold_uncertainty_score":0.009089649},"labels":[],"label_agreement":null},{"id":"W2045054556","doi":"10.1038/ncomms7168","title":"Toll-like receptor ligands sensitize B-cell receptor signalling by reducing actin-dependent spatial confinement of the receptor","year":2015,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of British Columbia","funders":"Canadian Institutes of Health Research; Fondation Bettencourt Schueller; Cystic Fibrosis Canada; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"B-cell receptor; Cell biology; Receptor; Crosstalk; Cofilin; Signalling; Actin; Toll-like receptor; Biology; Chemistry; Cell; Cytoskeleton; Actin cytoskeleton; B cell; Antibody; Innate immune system; Physics; Immunology; Biochemistry","score_opus":0.015447366847252224,"score_gpt":0.25066397412811575,"score_spread":0.23521660728086352,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045054556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99328256,0.0014534913,0.0032747528,0.00017409587,0.000021964073,0.00001765272,0.00006560113,0.00007251446,0.0016374873],"genre_scores_gemma":[0.99502206,0.000712535,0.0030572768,0.00008930348,0.000010255274,0.000014546036,0.000060361028,0.000015708287,0.0010180826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985874,0.000032715558,0.000008092898,0.000025164778,0.000041982657,0.000033279404],"domain_scores_gemma":[0.9998204,0.000051429193,0.000057608617,0.000019528921,0.0000143428315,0.000036810456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016143246,0.00019361704,0.00015087813,0.0001671764,0.00018703437,0.00036378807,0.00014490701,0.00033763403,0.0024211153],"category_scores_gemma":[0.0001660266,0.00016775365,0.00015986359,0.00007989578,0.00022760214,0.00027027525,0.00030974494,0.0004910455,0.00037441243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029953637,0.000008817194,0.00009229661,0.000015711423,0.0000014661208,0.000009978163,0.0000040711443,0.000037850503,0.9989748,0.000062133004,0.000013798693,0.0007491063],"study_design_scores_gemma":[0.000010490458,0.00015532196,0.0030992338,0.000005692,0.0000038012765,0.00018950106,0.000015076439,0.0005503041,0.9944969,0.00007856387,0.0013910548,0.000004101835],"about_ca_topic_score_codex":0.00013339227,"about_ca_topic_score_gemma":0.00034700392,"teacher_disagreement_score":0.0024211153,"about_ca_system_score_codex":0.00018631315,"about_ca_system_score_gemma":0.00009976731,"threshold_uncertainty_score":0.008099437},"labels":[],"label_agreement":null},{"id":"W2045277695","doi":"10.2174/1566524023362159","title":"Toll-like Receptor 9, CpG DNA and Innate Immunity","year":2002,"lang":"en","type":"review","venue":"Current Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":164,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"TLR9; Innate immune system; Toll-Like Receptor 9; CpG site; Biology; Acquired immune system; Immune system; Pattern recognition receptor; CpG Oligodeoxynucleotide; Toll-like receptor; Immunity; Cell biology; Innate lymphoid cell; Immunology; Intrinsic immunity; DNA methylation; Gene; Genetics; Gene expression","score_opus":0.03914635005385671,"score_gpt":0.31786565341691425,"score_spread":0.27871930336305756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045277695","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002752226,0.9960179,0.00019394139,0.00022581125,0.0005150124,0.000006904139,0.000013293349,0.000011307922,0.002740695],"genre_scores_gemma":[0.0019255622,0.9897003,0.00040868198,0.0004073252,0.0006334385,0.000012763123,0.00005639281,0.0000020941502,0.0068534953],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987316,0.000022660457,0.000012016184,0.00002346025,0.000054486976,0.000014183919],"domain_scores_gemma":[0.999928,0.000020905245,0.000012113761,0.0000024846756,0.000020065017,0.000016379261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024538,0.0010417129,0.0008533677,0.0010094951,0.00030392202,0.0008120899,0.00067070615,0.0010904273,0.004709349],"category_scores_gemma":[0.00026293556,0.00018697536,0.00021310119,0.0013253235,0.0003486375,0.0012444379,0.00040855125,0.0010794568,0.0046891985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017930378,0.00013397407,0.00033737076,0.010217537,0.00004496934,0.00081542763,0.000075521064,0.0004094839,0.008978011,0.004611402,0.039823607,0.9343734],"study_design_scores_gemma":[0.000021930804,0.00009316757,0.0010272317,0.000969693,0.000027218051,0.0022664804,0.00006654418,0.000055995275,0.00087065296,0.0033610642,0.9912277,0.000012438821],"about_ca_topic_score_codex":0.00063399767,"about_ca_topic_score_gemma":0.0011560357,"teacher_disagreement_score":0.004709349,"about_ca_system_score_codex":0.0005378395,"about_ca_system_score_gemma":0.000859,"threshold_uncertainty_score":0.015754402},"labels":[],"label_agreement":null},{"id":"W2045288098","doi":"10.1097/shk.0b013e31822d6442","title":"The Toll-like Receptor 9 Ligand CPG-C Attenuates Acute Inflammatory Cardiac Dysfunction","year":2011,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Ejection fraction; Medicine; TLR9; Ischemia; CpG site; Internal medicine; Endocrinology; Chemistry; Gene expression; Heart failure; Gene; DNA methylation","score_opus":0.010191257874100858,"score_gpt":0.20282905529964837,"score_spread":0.1926377974255475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045288098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634546,0.0013407259,0.0012659512,0.0001423417,0.00006029381,0.00003564188,0.00012856977,0.00007790137,0.0006031403],"genre_scores_gemma":[0.9939061,0.0014898817,0.002158414,0.00017975988,0.00003920078,0.000060103986,0.00034522638,0.000018653614,0.0018026279],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988496,0.00002374803,0.000011659992,0.000018482993,0.000022036791,0.00003911395],"domain_scores_gemma":[0.99982613,0.000013233338,0.000046728484,0.000012334145,0.000016722779,0.00008496117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020087582,0.00060684275,0.0003612913,0.00025650486,0.00010489598,0.0002051831,0.00022663632,0.00033842179,0.0010714057],"category_scores_gemma":[0.000140188,0.00012545087,0.0002120616,0.0000693192,0.00024493542,0.00022777623,0.00016582219,0.0010885653,0.00023275094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095471565,0.00029255255,0.00014576527,0.00006470059,0.000007718163,0.000023795139,0.000009444909,0.000055667468,0.99475276,0.000035195622,0.000046405,0.0036112692],"study_design_scores_gemma":[0.00028485476,0.009145742,0.0076495926,0.00004098743,0.000053889606,0.00021857659,0.00004969483,0.0012719245,0.9799359,0.00007307337,0.001264016,0.000011869662],"about_ca_topic_score_codex":0.00028819786,"about_ca_topic_score_gemma":0.0005760163,"teacher_disagreement_score":0.0010714057,"about_ca_system_score_codex":0.00013381039,"about_ca_system_score_gemma":0.00031084748,"threshold_uncertainty_score":0.0035841465},"labels":[],"label_agreement":null},{"id":"W2045596948","doi":"10.1097/00003246-200011000-00023","title":"A single endotoxin injection in the rabbit causes prolonged blood vessel dysfunction and a procoagulant state","year":2000,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"","keywords":"Medicine; Sodium nitroprusside; Internal medicine; CD31; Endocrinology; Endothelium; Clotting time; Endothelial stem cell; Endothelial dysfunction; Platelet; Nitric oxide; Immunohistochemistry; In vitro; Biology","score_opus":0.013664142328902767,"score_gpt":0.2559355871760954,"score_spread":0.24227144484719262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045596948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972072,0.0013221219,0.0007649965,0.00007802662,0.000059302263,0.00031137306,0.0000522456,0.000024449451,0.0001802041],"genre_scores_gemma":[0.9930682,0.0020181483,0.0019376125,0.00027895512,0.00025753386,0.001063968,0.00033105392,0.000014003735,0.001030496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846786,0.00040486566,0.00020171929,0.00031589688,0.0003320249,0.00027752385],"domain_scores_gemma":[0.99792284,0.00016827688,0.0010948237,0.00022852155,0.00010664916,0.00047892155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020458573,0.0014296004,0.002462596,0.0005206562,0.00033015115,0.0007459348,0.0006716084,0.0013146814,0.0013065259],"category_scores_gemma":[0.0011606175,0.000617178,0.00076839543,0.0004326853,0.0014652908,0.0007967933,0.0004555013,0.0013940805,0.00038633146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.3945817,0.04143394,0.010129002,0.0010048562,0.00054088223,0.0005174221,0.00017700208,0.00043458835,0.52118266,0.00023199129,0.00038830726,0.029377619],"study_design_scores_gemma":[0.049951535,0.84790266,0.024825526,0.00009923351,0.0006322966,0.00081665453,0.0001394562,0.00082845875,0.073396176,0.00008539384,0.0012746399,0.000048022768],"about_ca_topic_score_codex":0.00023068833,"about_ca_topic_score_gemma":0.00045024755,"teacher_disagreement_score":0.002462596,"about_ca_system_score_codex":0.0004293116,"about_ca_system_score_gemma":0.0006893241,"threshold_uncertainty_score":0.010819674},"labels":[],"label_agreement":null},{"id":"W2045807962","doi":"10.1097/qad.0b013e3282f4de35","title":"Toll-like receptor expression and responsiveness are increased in viraemic HIV-1 infection","year":2008,"lang":"en","type":"article","venue":"AIDS","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; McMaster University; University of Manitoba","funders":"","keywords":"Virology; Human immunodeficiency virus (HIV); Toll-like receptor; Immunology; Lentivirus; Biology; Viral disease; Receptor; Toll; Medicine; Immune system; Innate immune system; Genetics","score_opus":0.010475672767290431,"score_gpt":0.220690488739183,"score_spread":0.21021481597189257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045807962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99871373,0.0008572303,0.00007710015,0.000012219263,0.0000027359283,0.0000065165113,0.00011908581,0.0000027665951,0.00020860326],"genre_scores_gemma":[0.9990119,0.0003103532,0.0001563332,0.0000192404,0.000009772959,0.000013980145,0.00015859456,0.000001805431,0.00031808286],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997869,0.000057403722,0.000018286943,0.000047200825,0.00004420697,0.00004603861],"domain_scores_gemma":[0.9996555,0.00009817367,0.00014318895,0.00001972576,0.000035456964,0.000047875965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024340382,0.00019609738,0.00020625447,0.0003832039,0.0002454914,0.0003971635,0.00012862928,0.00029968945,0.0032320034],"category_scores_gemma":[0.00080675865,0.00018262501,0.00007828037,0.00029386525,0.0002557354,0.00015504919,0.00017920695,0.0002437013,0.00031783953],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035868685,0.0002241392,0.701365,0.00025037082,0.00011335934,0.00061585783,0.0005499587,0.00008878944,0.27693078,0.000085570005,0.00026190162,0.015927412],"study_design_scores_gemma":[0.000030414516,0.0005625181,0.98981863,0.000024066723,0.000035529793,0.0012848715,0.0002441437,0.000100573285,0.0072002583,0.000045549557,0.00064713514,0.0000063941097],"about_ca_topic_score_codex":0.00025535142,"about_ca_topic_score_gemma":0.0003633898,"teacher_disagreement_score":0.0032320034,"about_ca_system_score_codex":0.00011471176,"about_ca_system_score_gemma":0.00007585165,"threshold_uncertainty_score":0.010812104},"labels":[],"label_agreement":null},{"id":"W2045892365","doi":"10.1097/shk.0b013e3181c0f068","title":"SEPSIS, LEUKOCYTES, AND NITRIC OXIDE (NO)","year":2010,"lang":"en","type":"review","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health and Social Services Centre University Institute of Geriatrics of Sherbrooke; Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Sepsis; Septic shock; Immune system; Nitric oxide; Immunology; Medicine; Inflammation; Shock (circulatory); Biology; Cell biology; Intensive care medicine; Internal medicine","score_opus":0.018793505552919598,"score_gpt":0.281721730489067,"score_spread":0.2629282249361474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045892365","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013204878,0.99842924,0.00009483402,0.00014893597,0.00027431533,0.0000027766637,0.0000081064445,0.0000042927913,0.0009054559],"genre_scores_gemma":[0.0010016533,0.9974268,0.00013924573,0.00011428967,0.00028204563,0.0000059864888,0.00002192163,9.752295e-7,0.0010071553],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987423,0.000022366488,0.000017237293,0.000020354435,0.000053618816,0.0000121310395],"domain_scores_gemma":[0.999856,0.00004297694,0.00002580224,0.0000055120445,0.00004028725,0.000029484481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030545171,0.0010206661,0.0012670808,0.0013859035,0.00034485926,0.00085446204,0.0006622466,0.0009699049,0.0025722426],"category_scores_gemma":[0.00027973717,0.00021272663,0.00020979968,0.0016311861,0.00055701664,0.0010939034,0.0005770246,0.0014727897,0.0025086782],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008882277,0.00008037597,0.00027852913,0.009166921,0.000043642347,0.00035883865,0.00008907267,0.0002040703,0.005979878,0.0040764953,0.029245025,0.9503883],"study_design_scores_gemma":[0.00001154755,0.00009414626,0.0013906964,0.0015313483,0.000036228317,0.0018628032,0.00008040355,0.000055496363,0.0009806922,0.0024430363,0.9915004,0.000013258802],"about_ca_topic_score_codex":0.0009138689,"about_ca_topic_score_gemma":0.0012862992,"teacher_disagreement_score":0.0025722426,"about_ca_system_score_codex":0.0004780238,"about_ca_system_score_gemma":0.0009806555,"threshold_uncertainty_score":0.008605003},"labels":[],"label_agreement":null},{"id":"W2045965701","doi":"10.1016/j.jri.2007.04.008","title":"Expression of Toll-like receptors in murine vaginal epithelium is affected by the estrous cycle and stromal cells","year":2007,"lang":"en","type":"article","venue":"Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"TLR2; Estrous cycle; Stromal cell; Biology; Epithelium; Innate immune system; Immune system; Receptor; Andrology; Endocrinology; Internal medicine; Immunology; Medicine; Cancer research","score_opus":0.004236108975137676,"score_gpt":0.22412516551050252,"score_spread":0.21988905653536484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2045965701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975501,0.0014176224,0.00022116398,0.000041597632,0.00000844023,0.000005067532,0.00021303522,0.0000132931955,0.00052974425],"genre_scores_gemma":[0.9959079,0.0008699067,0.0003413965,0.000046137848,0.0000058429227,0.000016978896,0.00044603914,0.000019895751,0.0023458668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997874,0.000047075155,0.000013925398,0.00003041308,0.000029653791,0.00009152654],"domain_scores_gemma":[0.9997156,0.00005098903,0.00008396222,0.000030035055,0.000023136276,0.00009623269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016214256,0.00025263772,0.000325686,0.0005807666,0.00021133032,0.00047523648,0.00019329885,0.00035736666,0.0012591478],"category_scores_gemma":[0.0002122981,0.00042138106,0.0003019886,0.00031695532,0.0003860583,0.00035244317,0.0002672302,0.0005478444,0.00039890135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000774468,0.000022592942,0.00079109723,0.00001768505,0.000004004874,0.000073974064,0.000031915348,0.000024378432,0.99762934,0.000060710765,0.0000132518335,0.0005565753],"study_design_scores_gemma":[0.00008027372,0.0009488143,0.1385624,0.000027309075,0.00005965476,0.0006359019,0.00047114628,0.0006659474,0.85652226,0.0002077231,0.0017958132,0.000022723969],"about_ca_topic_score_codex":0.00051449024,"about_ca_topic_score_gemma":0.0008955977,"teacher_disagreement_score":0.0012591478,"about_ca_system_score_codex":0.00031715937,"about_ca_system_score_gemma":0.0002034163,"threshold_uncertainty_score":0.0042122602},"labels":[],"label_agreement":null},{"id":"W2046254358","doi":"10.1159/000141041","title":"Receptor-Interacting Protein-2 Deficiency Delays Macrophage Migration and Increases Intracellular Infection during Peritoneal Dialysis-Associated Peritonitis","year":2008,"lang":"en","type":"article","venue":"American Journal of Nephrology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"","keywords":"Downregulation and upregulation; Peritonitis; Peritoneal dialysis; Medicine; Intracellular; Macrophage; Microbiology; Immune system; Inflammation; Immunology; Peritoneum; Internal medicine; Biology; Pathology; In vitro; Cell biology","score_opus":0.005658117614957392,"score_gpt":0.20782059487734567,"score_spread":0.20216247726238828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046254358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954829,0.0016966037,0.001516073,0.00018238086,0.00017247228,0.000049999144,0.0001353496,0.000133472,0.00063074386],"genre_scores_gemma":[0.99583375,0.000803346,0.0012453637,0.000115866154,0.000048986432,0.0001283641,0.0002814059,0.000027473341,0.0015153257],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997956,0.00004874947,0.000017134915,0.000028896824,0.00004139512,0.00006817752],"domain_scores_gemma":[0.99982613,0.000016357379,0.000053853244,0.000013692841,0.000012573157,0.00007745695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021972973,0.00050366117,0.00062093604,0.00023256415,0.00015142855,0.0002506086,0.00030742344,0.0003467972,0.0014910139],"category_scores_gemma":[0.00033646537,0.00012622698,0.00027886798,0.00012146045,0.0002750202,0.00027564968,0.00025584415,0.001037056,0.0004119612],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040053884,0.00080246467,0.0005924078,0.000092991395,0.000020698113,0.00021897569,0.00004964997,0.000101791215,0.9882735,0.00010882386,0.00039638768,0.0053369734],"study_design_scores_gemma":[0.0021832667,0.029020239,0.043414786,0.00009772152,0.00021631292,0.0030111475,0.00029783676,0.0031831546,0.9061291,0.00037844054,0.0120053645,0.00006251732],"about_ca_topic_score_codex":0.00024810777,"about_ca_topic_score_gemma":0.00034023903,"teacher_disagreement_score":0.0014910139,"about_ca_system_score_codex":0.00020210515,"about_ca_system_score_gemma":0.0002263079,"threshold_uncertainty_score":0.004987955},"labels":[],"label_agreement":null},{"id":"W2046273714","doi":"10.1089/107999001459141","title":"Evaluation of Interleukin-4 Concentration by ELISA Is Influenced by the Consumption of IL-4 by Cultured Cells","year":2001,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Medical Research Council Canada; National Science Council","keywords":"ELISPOT; Immune system; Cytokine; Secretion; In vitro; Interleukin; Immunology; Context (archaeology); Interleukin 4; Biology; Chemistry; Cell biology; T cell; Endocrinology; Biochemistry","score_opus":0.05925896632868025,"score_gpt":0.3707852933583739,"score_spread":0.31152632702969363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046273714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6860074,0.010068341,0.28444046,0.00077067886,0.0009929248,0.0010799776,0.0016126706,0.0011545426,0.013873096],"genre_scores_gemma":[0.7348638,0.006924185,0.23794737,0.00075834297,0.0004966026,0.0036266195,0.0030827408,0.0006195321,0.011680781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9864178,0.0063600442,0.0012643266,0.0012183168,0.004013327,0.00072623976],"domain_scores_gemma":[0.988325,0.007538624,0.00093105336,0.0016036092,0.0013685898,0.00023312813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0050529675,0.0021886867,0.0011299492,0.001180706,0.00062205497,0.0018406906,0.0011065892,0.0012000753,0.0025052929],"category_scores_gemma":[0.008226642,0.0009270665,0.0005740238,0.0011954956,0.0015784573,0.0011501674,0.001207249,0.002270973,0.002090339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015117612,0.00008760433,0.0014371123,0.00015776647,0.000029725055,0.000055459775,0.00012677786,0.00015983806,0.99468684,0.00013148246,0.000069160356,0.002907064],"study_design_scores_gemma":[0.000013999622,0.00030192718,0.002802234,0.000028237193,0.000037638045,0.00014517271,0.00006048809,0.0016032518,0.9935561,0.00024241845,0.0011955821,0.0000130446415],"about_ca_topic_score_codex":0.0004666692,"about_ca_topic_score_gemma":0.0008170514,"teacher_disagreement_score":0.0050529675,"about_ca_system_score_codex":0.0005042148,"about_ca_system_score_gemma":0.000685492,"threshold_uncertainty_score":0.026722968},"labels":[],"label_agreement":null},{"id":"W2046409960","doi":"10.1016/j.molimm.2011.05.025","title":"Expression of duck CCL19 and CCL21 and CCR7 receptor in lymphoid and influenza-infected tissues","year":2011,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; American Lebanese Syrian Associated Charities","keywords":"CCL19; CCL21; Biology; Chemokine; Immune system; Chemokine receptor; C-C chemokine receptor type 7; Lymphatic system; Microbiology; Immunology; CXCL13; Virology","score_opus":0.009458144482362438,"score_gpt":0.21866375994935422,"score_spread":0.2092056154669918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046409960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9934417,0.0016095703,0.0012720824,0.000071548966,0.000036721634,0.000016989687,0.00073552725,0.000042479463,0.002773304],"genre_scores_gemma":[0.9892675,0.00063107815,0.0014431643,0.00006188752,0.000024704126,0.000040075895,0.0012883561,0.00001731518,0.0072259516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996916,0.000030097155,0.000021624195,0.00005783883,0.00004698068,0.00015193677],"domain_scores_gemma":[0.9997712,0.000035481367,0.00003679643,0.000025417263,0.00004384528,0.00008729094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014068374,0.00020826838,0.00023684518,0.00048342242,0.0004953008,0.0005675304,0.00016589304,0.00035263353,0.0026619746],"category_scores_gemma":[0.00016355731,0.0002018196,0.0003066439,0.0002064963,0.00027546816,0.00039085175,0.00021299759,0.0007073807,0.0007950682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028660186,0.000018632605,0.00096786726,0.00003444679,0.0000067206715,0.00010177487,0.000056445046,0.000030970154,0.9973797,0.00019150865,0.00006653168,0.0008586145],"study_design_scores_gemma":[0.000032401873,0.0005016368,0.121510215,0.000027734197,0.00006422464,0.0016362382,0.0008902256,0.0026829876,0.86702335,0.0001677764,0.005443301,0.0000200217],"about_ca_topic_score_codex":0.0023764512,"about_ca_topic_score_gemma":0.0038578182,"teacher_disagreement_score":0.0026619746,"about_ca_system_score_codex":0.00082124583,"about_ca_system_score_gemma":0.00029527675,"threshold_uncertainty_score":0.008905172},"labels":[],"label_agreement":null},{"id":"W2046901975","doi":"10.1046/j.1492-7535.2003.01255.x","title":"Pegylated Interferon-α2a Kinetics during Experimental HD: Impact of Permeability and Pore Size of Dialyzer","year":2003,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"PEG ratio; Permeability (electromagnetism); Medicine; Chromatography; Surgery; Chemistry; Biomedical engineering; Membrane; Biochemistry","score_opus":0.008069183195762358,"score_gpt":0.25983596729309366,"score_spread":0.25176678409733133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2046901975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966336,0.00069529994,0.0019420634,0.000027794269,0.000020467178,0.00004906137,0.00021618484,0.000038721086,0.00037681052],"genre_scores_gemma":[0.9974101,0.00030074996,0.001226576,0.00003979473,0.000017942259,0.00006293634,0.00031765105,0.000018136125,0.00060605514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971575,0.00008904102,0.000023130719,0.00006531245,0.000055561522,0.000051235587],"domain_scores_gemma":[0.99966586,0.00011969749,0.00007962933,0.000052414587,0.00003840113,0.00004403492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038969467,0.000263404,0.0003072775,0.00011820447,0.00015506722,0.0003615699,0.00015713945,0.00026482297,0.00127684],"category_scores_gemma":[0.0005103567,0.00009115393,0.0002138594,0.00013528555,0.0003411527,0.00036984638,0.00014932978,0.0004930586,0.00018588356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004846294,0.00033952628,0.002122442,0.00007547061,0.00001823451,0.000085504325,0.000120558456,0.00030731238,0.9879942,0.000049088172,0.000065975466,0.003975361],"study_design_scores_gemma":[0.00006395773,0.004552514,0.011491347,0.0000067110172,0.00004591509,0.00013818043,0.000058074722,0.0018067715,0.9807653,0.00004058873,0.0010182202,0.00001239747],"about_ca_topic_score_codex":0.00037091484,"about_ca_topic_score_gemma":0.0003118166,"teacher_disagreement_score":0.00127684,"about_ca_system_score_codex":0.0003128248,"about_ca_system_score_gemma":0.0001859027,"threshold_uncertainty_score":0.0042715073},"labels":[],"label_agreement":null},{"id":"W2047579358","doi":"10.1038/nature05935","title":"Protective and therapeutic role for αB-crystallin in autoimmune demyelination","year":2007,"lang":"en","type":"article","venue":"Nature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":508,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Multiple Sclerosis Society; Multiple Sclerosis Society of Canada; National Multiple Sclerosis Society","keywords":"Experimental autoimmune encephalomyelitis; Multiple sclerosis; Neuroprotection; Immune system; Inflammation; Immunology; Cytokine; Autoimmune disease; Microglia; Biology; Myelin; Heat shock protein; Medicine; Central nervous system; Neuroscience; Antibody; Gene","score_opus":0.005309776632627024,"score_gpt":0.2534311481466882,"score_spread":0.2481213715140612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047579358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80055726,0.16633959,0.0037912417,0.010836998,0.0013643042,0.00007176092,0.00033057466,0.00032625633,0.016381944],"genre_scores_gemma":[0.9780164,0.014902169,0.0019135993,0.0005512357,0.00046057816,0.000039231327,0.00014968107,0.000024766354,0.0039424035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998945,0.000034140725,0.0000067557426,0.000012993985,0.00001773256,0.0000337946],"domain_scores_gemma":[0.9998665,0.00002936536,0.00003263678,0.000017727702,0.000014280966,0.000039481998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036843945,0.0003149678,0.00036713443,0.00028294142,0.00035467616,0.00048148425,0.00024449002,0.000571591,0.0019176506],"category_scores_gemma":[0.00020185344,0.00009322751,0.0001866565,0.00013847667,0.0005660351,0.00040766347,0.0001882334,0.0011674067,0.00032059033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.021593677,0.00095733674,0.0017367387,0.0007283082,0.000121462224,0.00088942813,0.00009374584,0.0008637199,0.8390752,0.009873506,0.0063610137,0.117705874],"study_design_scores_gemma":[0.004639732,0.013268073,0.0221049,0.0002763648,0.0004047572,0.0061364756,0.00032337027,0.0027216647,0.7839909,0.009886171,0.15619086,0.000056633013],"about_ca_topic_score_codex":0.00029083164,"about_ca_topic_score_gemma":0.00029529954,"teacher_disagreement_score":0.0019176506,"about_ca_system_score_codex":0.00048600425,"about_ca_system_score_gemma":0.00030377574,"threshold_uncertainty_score":0.0064151883},"labels":[],"label_agreement":null},{"id":"W2047580104","doi":"10.1097/mog.0b013e32835a68ea","title":"Nod-like receptors in intestinal host defense","year":2012,"lang":"en","type":"review","venue":"Current Opinion in Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Wilson Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Pattern recognition receptor; Context (archaeology); Immune system; Immunology; Immunity; Microbiology; Gut flora; Dysbiosis; Host (biology); Genetics","score_opus":0.07129135058335291,"score_gpt":0.3392046427643076,"score_spread":0.2679132921809547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047580104","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000116464114,0.9979259,0.00011924099,0.0003064876,0.00051559316,0.0000038299663,0.000013133601,0.000009208937,0.0009900985],"genre_scores_gemma":[0.000954136,0.99692494,0.00019903643,0.00026412035,0.00059381704,0.000007129454,0.000044542645,0.0000022486515,0.0010100411],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998591,0.000027775619,0.000023082777,0.000024879198,0.000048873833,0.000016222833],"domain_scores_gemma":[0.99977356,0.00006448069,0.00005035141,0.000008275091,0.00006487855,0.00003851148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050680595,0.0009927475,0.0012136907,0.0011299993,0.00020224568,0.0007328343,0.0007970637,0.001000706,0.0041837236],"category_scores_gemma":[0.0005615531,0.00017180991,0.00035238353,0.0013553036,0.0004039663,0.0012597374,0.0006677229,0.001414597,0.0045449683],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013798352,0.00004832166,0.00022961282,0.01218531,0.00006661874,0.00040268645,0.00004550669,0.0003212055,0.003125542,0.002747731,0.05022368,0.9304657],"study_design_scores_gemma":[0.000022900955,0.00007401774,0.00083059154,0.0022112583,0.000050438946,0.002252863,0.0000458759,0.00006962168,0.0005522158,0.0013172408,0.99256057,0.000012248229],"about_ca_topic_score_codex":0.00037220045,"about_ca_topic_score_gemma":0.00044162848,"teacher_disagreement_score":0.0041837236,"about_ca_system_score_codex":0.00047485676,"about_ca_system_score_gemma":0.0006664133,"threshold_uncertainty_score":0.013995886},"labels":[],"label_agreement":null},{"id":"W2047759625","doi":"10.1007/s00441-010-1031-3","title":"Modulation of B cell responses by Toll-like receptors","year":2010,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Cell biology; Chemokine; Biology; Acquired immune system; Innate immune system; Immune system; Immunology; Receptor; Antigen; B-1 cell; Antibody; B cell; Toll-like receptor; Cytokine; Antigen-presenting cell; T cell","score_opus":0.05511761036375424,"score_gpt":0.36931823247249695,"score_spread":0.3142006221087427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047759625","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021824182,0.99743515,0.00038551353,0.0002634573,0.00047276285,0.0000064567953,0.000021242247,0.000011792079,0.0011853671],"genre_scores_gemma":[0.00093351654,0.9969151,0.00034128988,0.00022380949,0.00047909815,0.000009258827,0.00004859627,0.0000019929503,0.0010472622],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998379,0.000018577603,0.0000238021,0.000036566595,0.000062160485,0.00002095086],"domain_scores_gemma":[0.9997683,0.000079590114,0.000038410777,0.000010699277,0.00006715039,0.00003596945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057029695,0.0013697572,0.001397635,0.0013350791,0.00019012198,0.0008960847,0.00097068463,0.0009777774,0.0025130038],"category_scores_gemma":[0.0004794021,0.000284032,0.00030332486,0.0013506254,0.00062933227,0.0011741018,0.0006236037,0.0018239781,0.002933293],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020302783,0.00007795306,0.00015285221,0.0071785823,0.00004907275,0.00020719161,0.000025161551,0.00032472977,0.012814145,0.00210871,0.025056383,0.95180213],"study_design_scores_gemma":[0.00006428102,0.00013484067,0.0012196737,0.0013402868,0.00009531009,0.0013029272,0.000050868028,0.0001289377,0.00359305,0.0021212385,0.98992443,0.000024102093],"about_ca_topic_score_codex":0.0006050178,"about_ca_topic_score_gemma":0.0009126998,"teacher_disagreement_score":0.0025130038,"about_ca_system_score_codex":0.0006226389,"about_ca_system_score_gemma":0.0006764022,"threshold_uncertainty_score":0.008406818},"labels":[],"label_agreement":null},{"id":"W2047786245","doi":"10.1016/s0165-2478(01)00208-5","title":"Preparation and functional properties of polyclonal and monoclonal antibodies to murine MD-1","year":2001,"lang":"en","type":"article","venue":"Immunology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Western Hospital","funders":"Medical Research Council; Canadian Institutes of Health Research","keywords":"Polyclonal antibodies; Molecular biology; Monoclonal antibody; Antibody; Antigen; Complementary DNA; In vitro; Biology; Transfection; Spleen; Peptide; Chemistry; Immunology; Cell culture; Gene; Biochemistry","score_opus":0.012475731683162917,"score_gpt":0.22465605678997178,"score_spread":0.21218032510680887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047786245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9731399,0.0046084626,0.016591541,0.00033912587,0.00010556826,0.00017103745,0.0016399542,0.00011712184,0.003287333],"genre_scores_gemma":[0.96872205,0.0024418936,0.012425718,0.00027511964,0.00009337258,0.00023888817,0.010589323,0.00010596152,0.005107547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968016,0.00004462692,0.00003921566,0.00006393474,0.000062118146,0.000109991335],"domain_scores_gemma":[0.9994821,0.00018721352,0.00005447507,0.00008647872,0.00012205195,0.00006783516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005867489,0.00072083593,0.0003136039,0.0006081061,0.00031600398,0.0004273941,0.0007508097,0.0003953337,0.0013453087],"category_scores_gemma":[0.00088890066,0.00036200997,0.00045429362,0.0004504691,0.00023029077,0.0003911574,0.00032530865,0.0010620357,0.00072807714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022354703,0.00007691725,0.00029497573,0.000054150878,0.000007962689,0.000028640445,0.000026069069,0.00010155469,0.99657923,0.00019679382,0.000076519456,0.0023336671],"study_design_scores_gemma":[0.000040746527,0.00023060165,0.0043763993,0.000014699825,0.000044959506,0.00016846547,0.000022943126,0.0006354862,0.98997706,0.00012715046,0.004352898,0.000008648639],"about_ca_topic_score_codex":0.0010939951,"about_ca_topic_score_gemma":0.00094333116,"teacher_disagreement_score":0.0013453087,"about_ca_system_score_codex":0.00059001526,"about_ca_system_score_gemma":0.0002149281,"threshold_uncertainty_score":0.0045005083},"labels":[],"label_agreement":null},{"id":"W2047791002","doi":"10.1159/000233590","title":"Distribution of Radiolabelled Lymph Cells in Lymph Nodes and the Migratory Properties of Blood Lymphocytes in Sheep","year":2009,"lang":"en","type":"article","venue":"International Archives of Allergy and Applied Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lymph; Lymph node; Lymphocyte; Lymph node stromal cell; Population; Biology; Pathology; Efferent; Immunology; Mesenteric lymph nodes; Medicine; Immune system; Anatomy; Afferent","score_opus":0.003995173874115185,"score_gpt":0.17878367815111287,"score_spread":0.17478850427699769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047791002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99406344,0.0023285777,0.001779572,0.000026274121,0.000011511354,0.000011990353,0.00010778544,0.000023570126,0.0016472868],"genre_scores_gemma":[0.993782,0.0012559962,0.0021714617,0.000030348083,0.000014254605,0.000036826885,0.00023660065,0.000019332221,0.002453238],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990845,0.00002152778,0.000007988947,0.000030532057,0.000011312332,0.000020137104],"domain_scores_gemma":[0.9998343,0.000065230925,0.000028287488,0.000016176178,0.000026949412,0.000029131148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001807373,0.0002052277,0.00019617965,0.00062562124,0.00013620027,0.00032602865,0.00015208391,0.000310514,0.001164571],"category_scores_gemma":[0.0003632914,0.0001514973,0.00013193589,0.00020040308,0.00021735659,0.00030801166,0.00015631289,0.00038082188,0.00073890574],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082913553,0.000032801014,0.007259482,0.00013129543,0.000007560316,0.0003443983,0.00038433744,0.00007039604,0.9833341,0.00024720826,0.000039440278,0.00731994],"study_design_scores_gemma":[0.00014334968,0.004341579,0.18333302,0.00020398827,0.00016974399,0.005062367,0.0025592002,0.0018656631,0.79039174,0.0010238718,0.010834398,0.00007099201],"about_ca_topic_score_codex":0.0004723445,"about_ca_topic_score_gemma":0.00046671234,"teacher_disagreement_score":0.001164571,"about_ca_system_score_codex":0.000117511954,"about_ca_system_score_gemma":0.000075005846,"threshold_uncertainty_score":0.0038959384},"labels":[],"label_agreement":null},{"id":"W2048023526","doi":"10.1067/msy.2003.228","title":"Oxidant-induced priming of the macrophage involves activation of p38 mitogen-activated protein kinase through an Src-dependent pathway","year":2003,"lang":"en","type":"article","venue":"Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"p38 mitogen-activated protein kinases; Proto-oncogene tyrosine-protein kinase Src; Phosphorylation; Kinase; Mitogen-activated protein kinase; Src family kinase; Cell biology; Medicine; Lipopolysaccharide; Tyrosine phosphorylation; Signal transduction; MAPK/ERK pathway; Immunology; Biology","score_opus":0.031084419578103074,"score_gpt":0.23712082418152314,"score_spread":0.20603640460342007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048023526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787177,0.00578023,0.007624081,0.00084827736,0.00031070044,0.00014673678,0.00032966636,0.00012551961,0.006117043],"genre_scores_gemma":[0.9891533,0.0026693016,0.0030734977,0.00011147512,0.00015497998,0.00009168005,0.00029041318,0.000017255357,0.004438094],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997025,0.0000672569,0.000014688794,0.00003349369,0.00006693453,0.00011508709],"domain_scores_gemma":[0.99979156,0.000028940392,0.00005371582,0.000029405279,0.00004877085,0.00004764752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003852386,0.0006862662,0.00036585482,0.00046008572,0.000389146,0.00026162274,0.00026149233,0.0004618171,0.0030749545],"category_scores_gemma":[0.00031352826,0.0002267617,0.00055721344,0.00017416812,0.00036283678,0.0004523717,0.00037979276,0.00077092025,0.0005700619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017560441,0.00031834425,0.0009598205,0.00025967887,0.000027590379,0.0006121839,0.000071133625,0.00008648185,0.98544204,0.0009765755,0.00046529825,0.009024852],"study_design_scores_gemma":[0.00026448036,0.0031175127,0.07370855,0.00006372383,0.00009754401,0.002733834,0.00027765348,0.0017674171,0.9065558,0.0015650968,0.009821326,0.00002709764],"about_ca_topic_score_codex":0.00021779534,"about_ca_topic_score_gemma":0.0005248399,"teacher_disagreement_score":0.0030749545,"about_ca_system_score_codex":0.00029047858,"about_ca_system_score_gemma":0.00033283676,"threshold_uncertainty_score":0.010286689},"labels":[],"label_agreement":null},{"id":"W2048069351","doi":"10.1089/oli.2009.0210","title":"A Novel Class of Immune-Stimulatory CpG Oligodeoxynucleotides Unifies High Potency in Type I Interferon Induction with Preferred Structural Properties","year":2010,"lang":"en","type":"article","venue":"Oligonucleotides","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"","keywords":"Biology; CpG Oligodeoxynucleotide; Potency; CpG site; Interferon; Immunology; Immune system; Computational biology; Class (philosophy); Genetics; Gene; In vitro; Gene expression; Computer science; DNA methylation","score_opus":0.014245029299916471,"score_gpt":0.2173825332129617,"score_spread":0.20313750391304522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048069351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8979176,0.0136367,0.07734857,0.00027388005,0.0002720051,0.00032528833,0.00054642675,0.00035914915,0.009320326],"genre_scores_gemma":[0.92343754,0.0053375796,0.06402326,0.00030527345,0.000121299534,0.00019504494,0.00049428537,0.00003824033,0.0060475664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999254,0.00001060572,0.000006375778,0.000023298506,0.000023046206,0.000011347825],"domain_scores_gemma":[0.99992514,0.000012347077,0.00001818954,0.0000070210035,0.000012683725,0.000024567158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116177725,0.00032929803,0.0002181601,0.00020350845,0.000116117706,0.00019329369,0.00018343302,0.00027923303,0.00074831926],"category_scores_gemma":[0.00013668634,0.000083613566,0.00013785114,0.00013063232,0.00020286583,0.00023160248,0.0001682204,0.00041320716,0.0003200724],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096294876,0.000038718317,0.0001715313,0.00008627916,0.000004034406,0.00005278663,0.0000065788972,0.00012471636,0.9840582,0.0004471596,0.00009022648,0.014823618],"study_design_scores_gemma":[0.000037433914,0.0011098307,0.00092786225,0.0000127662115,0.000017821383,0.000898509,0.000012378865,0.0010252506,0.98309535,0.00021334826,0.012638333,0.00001117642],"about_ca_topic_score_codex":0.00014049525,"about_ca_topic_score_gemma":0.0003351184,"teacher_disagreement_score":0.00074831926,"about_ca_system_score_codex":0.00019274636,"about_ca_system_score_gemma":0.00028160712,"threshold_uncertainty_score":0.0025033355},"labels":[],"label_agreement":null},{"id":"W2048240027","doi":"10.1016/j.mib.2014.11.015","title":"Freund's adjuvant, NOD2 and mycobacteria","year":2014,"lang":"en","type":"review","venue":"Current Opinion in Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Muramyl dipeptide; NOD2; Peptidoglycan; Biology; Microbiology; Immunogenicity; Immunity; Mycobacterium tuberculosis; Innate immune system; Adjuvant; Acquired immune system; Mycobacterium; Tuberculosis; Immunology; Bacteria; Immune system; Genetics; Medicine","score_opus":0.0505940986587217,"score_gpt":0.35081718010177027,"score_spread":0.30022308144304855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048240027","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020025845,0.99820673,0.00012418284,0.0002938476,0.0005469723,0.0000036906583,0.000016097443,0.0000066119487,0.0006015801],"genre_scores_gemma":[0.0012256898,0.9962286,0.00018364555,0.00033676703,0.00058791856,0.000007471043,0.00005520985,0.0000014203877,0.0013732213],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999846,0.000019639372,0.000018558665,0.000024404608,0.000066657085,0.00002477531],"domain_scores_gemma":[0.9998369,0.00004763869,0.000039606333,0.000006491407,0.000041005598,0.000028310204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005802728,0.00092225353,0.0012191457,0.0010402392,0.00017462808,0.00082882866,0.00076613796,0.0013847346,0.002560966],"category_scores_gemma":[0.00042013905,0.00024369525,0.00027980228,0.0010283466,0.00048398468,0.00092127256,0.00063898007,0.0015895588,0.0018773985],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002815141,0.00011147713,0.00013917006,0.01318254,0.00005232153,0.00023148395,0.000022245707,0.0002847866,0.014035125,0.0018693092,0.03345533,0.9363347],"study_design_scores_gemma":[0.00006699937,0.00018553517,0.0009512641,0.002346474,0.000097038734,0.0010130471,0.000037873564,0.000093303,0.0025084002,0.0013326168,0.9913488,0.000018691644],"about_ca_topic_score_codex":0.0006305829,"about_ca_topic_score_gemma":0.0015161753,"teacher_disagreement_score":0.002560966,"about_ca_system_score_codex":0.0004547626,"about_ca_system_score_gemma":0.0009547394,"threshold_uncertainty_score":0.008567333},"labels":[],"label_agreement":null},{"id":"W2048265246","doi":"10.1111/j.1365-3083.2008.02145.x","title":"Muramyldipeptide Modulates CXCL‐8 Release of BEAS‐2B Cells via NOD2","year":2008,"lang":"en","type":"article","venue":"Scandinavian Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Deutsche Forschungsgemeinschaft","keywords":"NOD2; Chemistry; Cell biology; Biology; Biochemistry; Receptor; Innate immune system","score_opus":0.008262732995648617,"score_gpt":0.20403121987164113,"score_spread":0.19576848687599252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048265246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976999,0.00062090805,0.0006334273,0.00015604586,0.00003102081,0.00002228072,0.00023017744,0.00003186447,0.0005743093],"genre_scores_gemma":[0.99571276,0.00054873823,0.0011035275,0.000103841994,0.000013557925,0.00006569588,0.0006061762,0.000016650756,0.0018289661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997757,0.00007368164,0.00002444447,0.000026121774,0.00004341694,0.00005672544],"domain_scores_gemma":[0.99988174,0.000018581624,0.000030060164,0.000019062083,0.000015857175,0.000034660065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020048201,0.0003659218,0.00030499368,0.00016654396,0.00014458307,0.00035682876,0.00013625235,0.00032697836,0.0014526291],"category_scores_gemma":[0.00014516519,0.00017228155,0.00031459448,0.00012422274,0.00020160513,0.00026733367,0.00018802138,0.000760405,0.00081177737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023204574,0.0000438169,0.00016728841,0.000018648538,0.0000024141368,0.00006047632,0.000007935363,0.00001517989,0.9991698,0.000019624538,0.000017603674,0.00024523996],"study_design_scores_gemma":[0.00018166816,0.0014548652,0.015314561,0.000012131827,0.000026352633,0.0008040055,0.00013873327,0.0016094823,0.9771716,0.00007532123,0.0032002563,0.000010932404],"about_ca_topic_score_codex":0.00024556371,"about_ca_topic_score_gemma":0.00028833363,"teacher_disagreement_score":0.0014526291,"about_ca_system_score_codex":0.00017694311,"about_ca_system_score_gemma":0.00010839342,"threshold_uncertainty_score":0.004859507},"labels":[],"label_agreement":null},{"id":"W2048481002","doi":"10.1016/j.vetimm.2012.01.001","title":"Interferon-gamma and B-cell Activating Factor (BAFF) promote bovine B cell activation independent of TLR9 and T-cell signaling","year":2012,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"B-cell activating factor; TLR9; CD14; Biology; B cell; Peripheral blood mononuclear cell; Cytokine; CpG Oligodeoxynucleotide; Immunology; Population; T cell; Cell biology; Molecular biology; Naive B cell; Polyclonal B cell response; Antigen-presenting cell; Immune system; Antibody; Medicine; DNA methylation; Gene expression","score_opus":0.016520694476536396,"score_gpt":0.23452148429345332,"score_spread":0.21800078981691692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048481002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98518604,0.0050143283,0.002259299,0.0002005976,0.000109949455,0.00003400185,0.00031090534,0.00007171058,0.006813073],"genre_scores_gemma":[0.9937748,0.00085122354,0.0012884121,0.00010046617,0.000031177064,0.00002014206,0.00037905338,0.000024363366,0.0035303978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945015,0.000138628,0.00003256463,0.00006823864,0.00007773828,0.00023277919],"domain_scores_gemma":[0.99967337,0.00010171835,0.00007500885,0.000034661934,0.000033898566,0.000081505474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003551392,0.0004390778,0.00021275505,0.0004681029,0.00025775834,0.0006837164,0.00024893804,0.00052410876,0.0030639528],"category_scores_gemma":[0.00025282855,0.00022561802,0.00034286923,0.00016728451,0.000273789,0.0003667049,0.00044482155,0.0009828438,0.0010998364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003420073,0.000038930957,0.00036125377,0.000038779406,0.000003688805,0.000064109096,0.000032533713,0.000027873426,0.99772733,0.000113056536,0.00007557486,0.0011747963],"study_design_scores_gemma":[0.00010761052,0.0006120628,0.024720643,0.000050971896,0.000049300208,0.000610718,0.00035145984,0.0012337377,0.9609511,0.00023888238,0.011061258,0.0000122773645],"about_ca_topic_score_codex":0.0016787123,"about_ca_topic_score_gemma":0.0026352645,"teacher_disagreement_score":0.0030639528,"about_ca_system_score_codex":0.00046321537,"about_ca_system_score_gemma":0.00022922285,"threshold_uncertainty_score":0.010249913},"labels":[],"label_agreement":null},{"id":"W2048552397","doi":"10.1016/j.cytogfr.2014.03.002","title":"The 14th International TNF Conference, Québec City, Canada – Des Progrės Récents aux Défis Futurs (Recent Advances toward Future Challenges)","year":2014,"lang":"fr","type":"editorial","venue":"Cytokine & Growth Factor Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Anticipation (artificial intelligence); Political science; Library science; Environmental ethics; Philosophy","score_opus":0.03256511859089562,"score_gpt":0.28117520963496656,"score_spread":0.24861009104407095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048552397","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005703505,0.02594055,0.00008996908,0.03388843,0.9383309,0.00001563002,0.00008506411,0.000038792987,0.0015536436],"genre_scores_gemma":[0.0017527222,0.03230372,0.00021268985,0.038698792,0.88605285,0.000057881767,0.00015955626,0.00007379183,0.04068803],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99560404,0.00050232315,0.000314726,0.00048188306,0.0024243433,0.00067262084],"domain_scores_gemma":[0.9901917,0.0016301585,0.0006737622,0.00020926041,0.005079435,0.0022157705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006140123,0.003529729,0.0024642784,0.002540988,0.0030870936,0.0063718674,0.0027462635,0.010438725,0.018659554],"category_scores_gemma":[0.012192985,0.00081384805,0.0024823996,0.0012844995,0.0019602543,0.0023954622,0.0017026827,0.014890953,0.008373034],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052498333,0.0000071847135,0.000025533918,0.0001036781,0.000013060007,0.000050170376,0.000007043632,0.00001902646,0.00005562794,0.000098098324,0.9955863,0.0039818413],"study_design_scores_gemma":[0.00007063222,0.00002009226,0.00036816217,0.0003779462,0.000046737743,0.00009336693,0.000037165973,0.00005800431,0.00009117921,0.00022089909,0.99860126,0.000014483027],"about_ca_topic_score_codex":0.057801235,"about_ca_topic_score_gemma":0.1971729,"teacher_disagreement_score":0.94219875,"about_ca_system_score_codex":0.010544527,"about_ca_system_score_gemma":0.011192344,"threshold_uncertainty_score":0.11492962},"labels":[],"label_agreement":null},{"id":"W2048625993","doi":"10.1016/j.toxlet.2008.01.006","title":"Interleukin-8 induction by the environmental contaminant benzo(a)pyrene is aryl hydrocarbon receptor-dependent and leads to lung inflammation","year":2008,"lang":"en","type":"article","venue":"Toxicology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":134,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatoon Medical Imaging","funders":"Medical Center, University of Rochester; Région Bretagne; Agence Française de Sécurité Sanitaire de l'Environnement et du Travail; Fondation de France; Ligue Contre le Cancer","keywords":"Aryl hydrocarbon receptor; Bronchoalveolar lavage; Inflammation; Benzo(a)pyrene; Chromatin immunoprecipitation; Chemistry; Receptor; Alveolar macrophage; Immunology; Biology; Carcinogen; Cell biology; Lung; Gene expression; Transcription factor; Internal medicine; Biochemistry; Macrophage; Promoter; Medicine; Gene; In vitro","score_opus":0.006831292184513833,"score_gpt":0.20139228209869975,"score_spread":0.1945609899141859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048625993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967643,0.0009218205,0.0011580163,0.00020399793,0.00004466929,0.000011956771,0.00013690353,0.000050999723,0.00070726976],"genre_scores_gemma":[0.9969909,0.000580675,0.0005067083,0.000053436623,0.000027208916,0.000017347998,0.00019307475,0.000007429946,0.0016231677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963546,0.00007603598,0.000017535303,0.00004175342,0.00009826472,0.00013095184],"domain_scores_gemma":[0.9996811,0.00007309248,0.0000869665,0.000045777455,0.000047945094,0.00006517579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019521327,0.00034800623,0.00029657426,0.0002563127,0.00015799601,0.00033859286,0.000112837064,0.0004391749,0.0019113434],"category_scores_gemma":[0.00027368774,0.0002534469,0.00034083138,0.00012249376,0.0002729966,0.00024257813,0.00027766937,0.0007372224,0.0006147962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043462816,0.00007068692,0.0011787678,0.000023352415,0.000005541001,0.00017639124,0.000013304219,0.00003344674,0.9968836,0.00003348133,0.000073717296,0.0010731455],"study_design_scores_gemma":[0.00008126765,0.0012819668,0.050941568,0.000015080547,0.000030095884,0.0008239889,0.00014090363,0.0009954638,0.9439746,0.00019545115,0.0015097506,0.000009853611],"about_ca_topic_score_codex":0.0002857952,"about_ca_topic_score_gemma":0.0006226289,"teacher_disagreement_score":0.0019113434,"about_ca_system_score_codex":0.00022483934,"about_ca_system_score_gemma":0.00021610802,"threshold_uncertainty_score":0.0063940883},"labels":[],"label_agreement":null},{"id":"W2048862104","doi":"10.1111/j.1574-695x.2001.tb00535.x","title":"CpG ODN can re-direct the Th bias of established Th2 immune responses in adult and young mice","year":2001,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Honeywell (Canada)","funders":"","keywords":"HBsAg; CpG Oligodeoxynucleotide; Immune system; Immunology; Alum; Biology; Antigen; CTL*; Antibody; CpG site; TLR9; Adjuvant; Immunization; Virology; Hepatitis B virus; Chemistry; Virus; DNA methylation; CD8","score_opus":0.011802078623497617,"score_gpt":0.23804181415410852,"score_spread":0.2262397355306109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2048862104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99293584,0.0019298214,0.0023947565,0.00013653556,0.000099044264,0.00010105468,0.00059913326,0.000162603,0.0016412166],"genre_scores_gemma":[0.9790076,0.0022745167,0.0047276737,0.00035093422,0.00006781852,0.00024847992,0.0011004369,0.00007549788,0.012147056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997892,0.000028504963,0.00002251838,0.000052831692,0.000043726806,0.00006327909],"domain_scores_gemma":[0.9995654,0.00004042562,0.00015365588,0.000039886043,0.000033359487,0.00016722431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030240373,0.00046332515,0.00030642154,0.00042501852,0.00010853067,0.00021112066,0.00024374823,0.0004601052,0.0014387469],"category_scores_gemma":[0.00018587204,0.000239752,0.000270191,0.00010839445,0.00024575274,0.00024923965,0.00019036794,0.0011431783,0.00058837736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003321279,0.00012042834,0.00024099166,0.00004265894,0.0000035002604,0.000053345957,0.000029766175,0.00003082379,0.9974764,0.00005517356,0.00004358154,0.001571245],"study_design_scores_gemma":[0.00010833894,0.0053315186,0.0090178335,0.00003410138,0.00003084631,0.0004018142,0.000055722758,0.0004534555,0.980292,0.000093789226,0.004168046,0.000012485639],"about_ca_topic_score_codex":0.00035373442,"about_ca_topic_score_gemma":0.00070972287,"teacher_disagreement_score":0.0014387469,"about_ca_system_score_codex":0.00018157747,"about_ca_system_score_gemma":0.00024064767,"threshold_uncertainty_score":0.004813075},"labels":[],"label_agreement":null},{"id":"W2049000073","doi":"10.1111/j.1462-5822.2007.01052.x","title":"Toll-like receptor 2 plays a critical role in maintaining mucosal integrity during Citrobacter rodentium-induced colitis","year":2007,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":171,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; BC Children's Hospital; University of British Columbia","funders":"National Institutes of Health; Michael Smith Health Research BC; AstraZeneca; Canadian Association of Gastroenterology; Canadian Institutes of Health Research; CH.I.L.D. Foundation","keywords":"Citrobacter rodentium; TLR2; Biology; Colitis; Microbiology; Intestinal mucosa; Immunology; Immune system; Citrobacter; Pathogen; Inflammation; Toll-like receptor; Innate immune system; Medicine; Enterobacteriaceae; Internal medicine","score_opus":0.009294170018071146,"score_gpt":0.23655967870946035,"score_spread":0.2272655086913892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049000073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99262047,0.004472853,0.0015141419,0.00019323212,0.000033568813,0.000019142408,0.00013491874,0.000086271684,0.0009253055],"genre_scores_gemma":[0.9973048,0.00071518274,0.0009181833,0.000054481992,0.000013604984,0.000017048516,0.00017286987,0.000009154361,0.0007948067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976975,0.0000619808,0.000025749476,0.000029224597,0.000036545764,0.00007670779],"domain_scores_gemma":[0.99984574,0.000010944056,0.000054100416,0.000018655495,0.000015812162,0.0000547076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024800276,0.0005227256,0.0003025964,0.0002850928,0.00018653214,0.0003402011,0.00018156916,0.00048909127,0.0010379351],"category_scores_gemma":[0.00023901842,0.00018532963,0.00022277333,0.00009301039,0.00025374527,0.00041246024,0.00028172796,0.00052774494,0.00028080307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054709957,0.000046293146,0.0008169415,0.000077456,0.0000056116332,0.00020998498,0.000020112537,0.00004993482,0.9966534,0.00006544045,0.000063942025,0.0014438948],"study_design_scores_gemma":[0.00011833864,0.002048448,0.05927379,0.000057433732,0.000054389715,0.0040575964,0.0002208743,0.001226736,0.9279291,0.00028801314,0.004704368,0.000020925354],"about_ca_topic_score_codex":0.00013170874,"about_ca_topic_score_gemma":0.00018029806,"teacher_disagreement_score":0.0010379351,"about_ca_system_score_codex":0.00023809115,"about_ca_system_score_gemma":0.0001450772,"threshold_uncertainty_score":0.003472209},"labels":[],"label_agreement":null},{"id":"W2049023198","doi":"10.1152/japplphysiol.00411.2010","title":"Ethyl gallate, a scavenger of hydrogen peroxide that inhibits lysozyme-induced hydrogen peroxide signaling in vitro, reverses hypotension in canine septic shock","year":2010,"lang":"en","type":"article","venue":"Journal of Applied Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Hydrogen peroxide; Lysozyme; Scavenger; Chemistry; In vitro; Propyl gallate; Septic shock; Gallate; Peroxide; Pharmacology; Biochemistry; Medicine; Sepsis; Internal medicine; Radical; Antioxidant; Nuclear chemistry; Organic chemistry","score_opus":0.011742179945551871,"score_gpt":0.22312713416114133,"score_spread":0.21138495421558945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049023198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98976445,0.0051847035,0.0034032934,0.00033238568,0.00015622195,0.000065228975,0.00020323407,0.00019704341,0.0006933858],"genre_scores_gemma":[0.9907003,0.0031012201,0.0034157485,0.00019893495,0.000071113696,0.00004633785,0.00063632964,0.000035962035,0.0017941846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998423,0.000029569288,0.0000244673,0.000023450935,0.000029121717,0.0000511418],"domain_scores_gemma":[0.9997826,0.000030827774,0.00006908456,0.000025017669,0.000032609965,0.000059788617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030069,0.0008292142,0.0007198073,0.0005404804,0.00020703668,0.00027759527,0.00043162986,0.0005614231,0.00092450937],"category_scores_gemma":[0.000302816,0.00026019613,0.00045631587,0.00024585682,0.0003858364,0.0004454058,0.00025721188,0.00094464794,0.00020140377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012976731,0.00021858477,0.00010659068,0.000101710124,0.000022194685,0.000056353703,0.00002855028,0.00009029521,0.9955492,0.0000397671,0.00007036806,0.0024186939],"study_design_scores_gemma":[0.00015407917,0.003064407,0.0023958199,0.000011838849,0.000067558256,0.00009471825,0.00003115601,0.00067311083,0.9924638,0.000039551524,0.0009953,0.000008657078],"about_ca_topic_score_codex":0.00096920837,"about_ca_topic_score_gemma":0.0016315122,"teacher_disagreement_score":0.00096920837,"about_ca_system_score_codex":0.00022919575,"about_ca_system_score_gemma":0.0003677145,"threshold_uncertainty_score":0.0030927658},"labels":[],"label_agreement":null},{"id":"W2049106125","doi":"10.1016/s0889-1591(02)00055-7","title":"Molecular insights on the cerebral innate immune system","year":2003,"lang":"en","type":"review","venue":"Brain Behavior and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":418,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Wilfrid Laurier University","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Circumventricular organs; Immune system; Biology; TLR4; CD14; TLR2; Immunology; Pattern recognition receptor; Microglia; Choroid plexus; Toll-like receptor; Acquired immune system; Neuroscience; Inflammation; Central nervous system","score_opus":0.029174649007070008,"score_gpt":0.27945515805273263,"score_spread":0.2502805090456626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049106125","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012637419,0.9968862,0.0003706494,0.0004902242,0.00068687164,0.0000030695796,0.00001203887,0.000008699601,0.0014158356],"genre_scores_gemma":[0.0006055135,0.99687093,0.00034819983,0.00026135417,0.0007152167,0.0000048064744,0.000022911916,0.0000016831365,0.0011694664],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998447,0.00001752127,0.000021987496,0.000036598904,0.00005957939,0.000019673522],"domain_scores_gemma":[0.9996636,0.00012855875,0.000031778098,0.000016122196,0.0001112804,0.00004856606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008012314,0.0013881129,0.0020023067,0.0018974572,0.00041303883,0.0017302757,0.0018126372,0.0019030265,0.003032864],"category_scores_gemma":[0.00062139455,0.00040078544,0.0004264003,0.0018447671,0.0014297074,0.0025050032,0.0007894006,0.0030784325,0.0025267967],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017395112,0.00008124424,0.00018127392,0.00792741,0.000082390914,0.0008479601,0.000072164534,0.0007211026,0.009724447,0.0076492666,0.05165366,0.920885],"study_design_scores_gemma":[0.000021640883,0.000043991055,0.00056053436,0.0011209768,0.00007100138,0.0015926323,0.00006705417,0.00011776018,0.0014293516,0.0047998177,0.99015206,0.0000232082],"about_ca_topic_score_codex":0.0018538533,"about_ca_topic_score_gemma":0.0036518257,"teacher_disagreement_score":0.003032864,"about_ca_system_score_codex":0.0012828521,"about_ca_system_score_gemma":0.0013712196,"threshold_uncertainty_score":0.010145962},"labels":[],"label_agreement":null},{"id":"W2049122310","doi":"10.1016/j.dci.2006.05.001","title":"Identification and characterization of functional CD154 (CD40 ligand) in the Pekin duck","year":2006,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heritage Medical Research Clinic; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; CD154; Open reading frame; Molecular biology; Gene; Splenocyte; Immune system; Peptide sequence; CD40; Biochemistry; Immunology; In vitro; Cytotoxic T cell","score_opus":0.016886215711624693,"score_gpt":0.2335686720251489,"score_spread":0.2166824563135242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049122310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968585,0.00064008846,0.001016971,0.00004561639,0.000019074389,0.0000121016155,0.00036964857,0.000023710858,0.0010142913],"genre_scores_gemma":[0.988513,0.00035029746,0.0013947393,0.000060817278,0.0000108483,0.000015856227,0.0009567992,0.00002363391,0.008674037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991035,0.000007168297,0.0000086378805,0.000028924682,0.000016513259,0.000028399332],"domain_scores_gemma":[0.999777,0.000033139993,0.000039431023,0.000029327806,0.0000499304,0.000071183735],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090491645,0.00029143284,0.00027780732,0.00039802465,0.0002641205,0.000685379,0.00023488622,0.00035302743,0.0014137715],"category_scores_gemma":[0.0002317821,0.00021096409,0.00021725423,0.00010439375,0.00022159866,0.00029741327,0.0002091601,0.0007442147,0.0007251301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090505106,0.0000111624295,0.0006334664,0.000012481601,0.000002939808,0.00017429916,0.000036426994,0.000027256812,0.99803466,0.00009545352,0.00002215515,0.00085911853],"study_design_scores_gemma":[0.00003814668,0.00061801804,0.09066804,0.000022212513,0.000081377795,0.0036283354,0.0007618245,0.0017581903,0.8916423,0.00030484868,0.010443707,0.000032918568],"about_ca_topic_score_codex":0.0026070015,"about_ca_topic_score_gemma":0.0026151338,"teacher_disagreement_score":0.0026070015,"about_ca_system_score_codex":0.0006349198,"about_ca_system_score_gemma":0.00022077365,"threshold_uncertainty_score":0.005183637},"labels":[],"label_agreement":null},{"id":"W2049134238","doi":"10.1186/1756-0500-5-616","title":"Toll-like receptor ligands induce the expression of interferon-gamma and interleukin-17 in chicken CD4+ T cells","year":2012,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Poultry Industry Council","keywords":"TLR2; TLR3; TLR9; Biology; Receptor; Cytokine; Toll-like receptor; Cell biology; TLR4; Effector; Interferon; Molecular biology; Innate immune system; Signal transduction; Immunology; Gene expression; Gene; Biochemistry","score_opus":0.08304959071086042,"score_gpt":0.3461564331685284,"score_spread":0.26310684245766797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049134238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944074,0.0020767755,0.0012037051,0.00007622989,0.00007331264,0.00006765164,0.0003695744,0.000043440363,0.0016820295],"genre_scores_gemma":[0.9903128,0.0011382542,0.0027132716,0.0002061166,0.00005891743,0.00016721466,0.000885041,0.000035056146,0.0044833776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998271,0.000025010955,0.000020802252,0.000032790518,0.000025122643,0.000069095804],"domain_scores_gemma":[0.99985063,0.00003697133,0.000033239547,0.00001776933,0.000026643296,0.000034640874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013610238,0.00042106363,0.0002650162,0.00028477222,0.00012994294,0.00033396322,0.0001344195,0.0003492158,0.0016937532],"category_scores_gemma":[0.00013147474,0.00023231196,0.0003413232,0.00016233006,0.00018803697,0.00016064396,0.00017730572,0.0006499286,0.00086078054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038508326,0.00003641543,0.0008178639,0.000083327766,0.000005718162,0.000099803154,0.00003149017,0.00007897278,0.997147,0.000021780343,0.000050249073,0.0012422327],"study_design_scores_gemma":[0.0002660599,0.0025931462,0.03151855,0.00006354347,0.000106715095,0.0007821801,0.00037170897,0.0017559999,0.954069,0.00013466748,0.008320199,0.000018238841],"about_ca_topic_score_codex":0.00034452984,"about_ca_topic_score_gemma":0.0006511773,"teacher_disagreement_score":0.0016937532,"about_ca_system_score_codex":0.0002662247,"about_ca_system_score_gemma":0.00018636734,"threshold_uncertainty_score":0.0056661963},"labels":[],"label_agreement":null},{"id":"W2049350743","doi":"10.1016/j.dci.2014.08.011","title":"Toll-like receptor 2 ligand, lipoteichoic acid is inhibitory against infectious laryngotracheitis virus infection in vitro and in vivo","year":2014,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"Alberta Livestock and Meat Agency; Canadian Food Inspection Agency; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council; University of Calgary; North Carolina State University","keywords":"Lipoteichoic acid; Biology; Innate immune system; In vivo; Toll-like receptor; Immune system; In vitro; Receptor; Virus; Microbiology; Pathogen-associated molecular pattern; Virology; Immunology; Macrophage; Pattern recognition receptor; Staphylococcus aureus; Biochemistry; Bacteria","score_opus":0.01047743074338502,"score_gpt":0.23536577954456633,"score_spread":0.2248883488011813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049350743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936559,0.0028102838,0.0010121682,0.00009396024,0.00008480525,0.000029200974,0.00021209857,0.00003987716,0.002061791],"genre_scores_gemma":[0.99407756,0.0014474317,0.00091225887,0.0000705104,0.000049283663,0.00003912216,0.00092395424,0.00001378337,0.0024660463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996024,0.00010275571,0.000030668867,0.00003795792,0.000081954706,0.0001442735],"domain_scores_gemma":[0.99974257,0.000079571975,0.00004143546,0.000036390567,0.000022435192,0.00007757718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035820843,0.00063631585,0.00044930668,0.00041607843,0.00036522737,0.00059047993,0.0003336994,0.00032218912,0.0014562052],"category_scores_gemma":[0.0002729422,0.00027364236,0.00033732934,0.00018461427,0.00044708909,0.00025937677,0.00021790169,0.0009416918,0.00052858394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096555357,0.00017322486,0.00016237082,0.000049346534,0.00000858623,0.00004500133,0.000020161284,0.00007982022,0.99746954,0.000074863914,0.000058738777,0.0008929029],"study_design_scores_gemma":[0.000109026514,0.0024469635,0.0064701904,0.000014517569,0.000035160992,0.00024318926,0.00007961746,0.00082710735,0.9882112,0.00007067964,0.0014857792,0.0000066165676],"about_ca_topic_score_codex":0.00084924966,"about_ca_topic_score_gemma":0.0012449258,"teacher_disagreement_score":0.0014562052,"about_ca_system_score_codex":0.0003257661,"about_ca_system_score_gemma":0.00053322146,"threshold_uncertainty_score":0.0048714876},"labels":[],"label_agreement":null},{"id":"W2049441873","doi":"10.1051/vetres:2003012","title":"Functional analysis of recombinant bovine CD14","year":2003,"lang":"en","type":"article","venue":"Veterinary Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Lipopolysaccharide; CD14; Tumor necrosis factor alpha; CD18; Biology; Molecular biology; Recombinant DNA; Monoclonal antibody; Incubation; Interleukin; Cytokine; Antibody; Endocrinology; Immunology; Biochemistry; Flow cytometry; Gene","score_opus":0.13366817891931318,"score_gpt":0.36662784750870864,"score_spread":0.23295966858939546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049441873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9795121,0.0068711564,0.009506874,0.00019710821,0.00008826085,0.00011451108,0.0011115997,0.00007375202,0.002524689],"genre_scores_gemma":[0.97697574,0.0023320098,0.0112952795,0.00014376451,0.000029620185,0.00007957266,0.0040101763,0.000037679736,0.0050961217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997522,0.000054106804,0.00002550322,0.000056834895,0.00006362312,0.000047681424],"domain_scores_gemma":[0.99983704,0.000030378125,0.000038188635,0.00002481252,0.000038373728,0.00003119078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023310607,0.0003321103,0.00018204312,0.00029854392,0.00011414622,0.0002472786,0.0002033969,0.0002422543,0.001254733],"category_scores_gemma":[0.00034910912,0.0001076221,0.00030249744,0.00018696449,0.00014552873,0.00011545998,0.00015413424,0.0002927012,0.00059889676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025753732,0.000033824548,0.00041152112,0.000040369843,0.000004932652,0.00003608432,0.000009396591,0.000085341686,0.9954892,0.00010820347,0.000055246215,0.0034683822],"study_design_scores_gemma":[0.000039336574,0.00096180197,0.0061448812,0.000014319092,0.00003394545,0.0007325867,0.000023701721,0.0014019135,0.97333074,0.000072477415,0.017238462,0.0000057954367],"about_ca_topic_score_codex":0.0008247984,"about_ca_topic_score_gemma":0.0005485812,"teacher_disagreement_score":0.001254733,"about_ca_system_score_codex":0.0004115402,"about_ca_system_score_gemma":0.00017240396,"threshold_uncertainty_score":0.004197538},"labels":[],"label_agreement":null},{"id":"W2049514847","doi":"10.1203/01.pdr.0000130473.30874.b6","title":"Labor Promotes Neonatal Neutrophil Survival and Lipopolysaccharide Responsiveness","year":2004,"lang":"en","type":"article","venue":"Pediatric Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children; Health Research Board","keywords":"Neutrophilia; Lipopolysaccharide; Medicine; Integrin alpha M; Proinflammatory cytokine; Cord blood; Leukocytosis; Immune system; Immunology; Neonatal sepsis; Flow cytometry; Internal medicine; Inflammation; Endocrinology; Andrology; Sepsis","score_opus":0.03220574008469963,"score_gpt":0.3173614932718682,"score_spread":0.28515575318716857,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2049514847","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98575276,0.00771395,0.0019709205,0.00088239176,0.00015294623,0.00004198075,0.00035622605,0.00010002976,0.003028743],"genre_scores_gemma":[0.9913238,0.00310504,0.0010024043,0.0002187316,0.000077388504,0.00010776305,0.00035423017,0.000023826235,0.0037868095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995704,0.0001698132,0.000036730842,0.00004587732,0.000060686,0.00011655629],"domain_scores_gemma":[0.9989753,0.00027369373,0.00021940396,0.00019213156,0.000083656916,0.00025598187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072674965,0.00036499085,0.00047078312,0.0003598838,0.00033533573,0.0008081236,0.00032214308,0.00042876843,0.0035732344],"category_scores_gemma":[0.0013896001,0.00018341799,0.0003321838,0.00016339365,0.0006229699,0.00045702702,0.00094680814,0.00093611336,0.00065171585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0130092455,0.00064149324,0.019852411,0.00040546543,0.000034286022,0.001968772,0.000851008,0.00031601146,0.89952976,0.0027057528,0.0018114739,0.058874343],"study_design_scores_gemma":[0.0002788666,0.004482196,0.20117564,0.00040247847,0.000117399104,0.0029198239,0.0023902764,0.0011926708,0.76634157,0.0026984494,0.017962907,0.000037683127],"about_ca_topic_score_codex":0.00055230886,"about_ca_topic_score_gemma":0.0007301745,"teacher_disagreement_score":0.0035732344,"about_ca_system_score_codex":0.0006911736,"about_ca_system_score_gemma":0.0008025683,"threshold_uncertainty_score":0.011953652},"labels":[],"label_agreement":null},{"id":"W2050207715","doi":"10.1016/j.ijdevneu.2008.01.001","title":"Sexually dimorphic effects of neonatal immune system activation with lipopolysaccharide on the behavioural response to a homotypic adult immune challenge","year":2008,"lang":"en","type":"article","venue":"International Journal of Developmental Neuroscience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipopolysaccharide; Immune system; Sexual dimorphism; Saline; Physiology; Endocrinology; Internal medicine; Biology; Open field; Locomotor activity; Immunology; Medicine","score_opus":0.013757378955837351,"score_gpt":0.22275592432443458,"score_spread":0.20899854536859724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050207715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986064,0.00035655996,0.00017756468,0.00003183408,0.00001259208,0.0000086136015,0.0001764361,0.000014635193,0.0006153616],"genre_scores_gemma":[0.9956949,0.0007542865,0.0004956107,0.00013369726,0.000014451166,0.000048369926,0.00031275742,0.000012155763,0.0025338524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998354,0.000031924486,0.000011857035,0.000038501963,0.000050044397,0.000032346175],"domain_scores_gemma":[0.999603,0.000034857952,0.00017525381,0.000031936244,0.00003489737,0.00012006334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013089493,0.00024364112,0.00026944475,0.000260973,0.000098578304,0.00019701813,0.0001566041,0.00014574635,0.0016111962],"category_scores_gemma":[0.0002372158,0.00008888441,0.00014271776,0.000097267955,0.00024753832,0.0001123641,0.00019623821,0.0005245076,0.00020712258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007831015,0.0002272658,0.0054263957,0.0000524012,0.000011145097,0.0003593366,0.00009308069,0.000029753439,0.98565733,0.00008566813,0.00009239386,0.00718204],"study_design_scores_gemma":[0.000049847113,0.0071982313,0.53701496,0.000043931315,0.000056474,0.001766254,0.00058632065,0.00038997247,0.45029297,0.00020448858,0.0023641083,0.000032335356],"about_ca_topic_score_codex":0.00032694283,"about_ca_topic_score_gemma":0.00071355794,"teacher_disagreement_score":0.0016111962,"about_ca_system_score_codex":0.00018473154,"about_ca_system_score_gemma":0.00019905478,"threshold_uncertainty_score":0.0053899884},"labels":[],"label_agreement":null},{"id":"W2050582911","doi":"10.1016/j.plefa.2005.05.014","title":"Lipoxins and aspirin-triggered lipoxins in neutrophil adhesion and signal transduction","year":2005,"lang":"en","type":"review","venue":"Prostaglandins Leukotrienes and Essential Fatty Acids","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Signal transduction; Cell biology; Inflammation; Lipoxin; Interleukin 8; Chemistry; Cell adhesion molecule; Immunology; Biology","score_opus":0.02089527947230304,"score_gpt":0.2783537122735898,"score_spread":0.2574584328012868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050582911","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030574115,0.99736553,0.00039120927,0.00020804291,0.0006663283,0.000008045848,0.000015369109,0.000009871789,0.00102981],"genre_scores_gemma":[0.0011753278,0.99565166,0.00028569385,0.00017177984,0.00046874615,0.000011086272,0.000041938223,0.0000013416096,0.0021924158],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998747,0.000014242144,0.000022456823,0.000020903455,0.000051662988,0.000016136724],"domain_scores_gemma":[0.9999007,0.000027334925,0.000021585342,0.0000057277716,0.000029872774,0.000014697451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003794759,0.0011328441,0.0013697357,0.001228322,0.0002589604,0.00088651717,0.000810524,0.0012191642,0.0025655085],"category_scores_gemma":[0.00030262582,0.0002984836,0.0003254818,0.0016188486,0.0005306729,0.0015027456,0.0006554405,0.0011895733,0.0028786205],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029772145,0.00011718263,0.00018214661,0.0071765133,0.000071887436,0.00056766404,0.000055527955,0.0004345708,0.016741395,0.0037435286,0.03111448,0.9394974],"study_design_scores_gemma":[0.000046872607,0.00017212836,0.0010639053,0.0010810309,0.00010585837,0.0016949201,0.000057420977,0.00014903203,0.0040185056,0.0021727586,0.9894169,0.0000206588],"about_ca_topic_score_codex":0.00055578153,"about_ca_topic_score_gemma":0.0010879091,"teacher_disagreement_score":0.0025655085,"about_ca_system_score_codex":0.00054338394,"about_ca_system_score_gemma":0.0007238035,"threshold_uncertainty_score":0.008582473},"labels":[],"label_agreement":null},{"id":"W2050589157","doi":"10.1177/0961203309104391","title":"Long-term follow-up after non-myeloablative transplant of bone and marrow in BXSB mice","year":2009,"lang":"en","type":"article","venue":"Lupus","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Health Sciences Centre","funders":"George Washington University","keywords":"Medicine; Bone marrow; Mesenchymal stem cell; CD8; Stromal cell; FOXP3; Pathology; Flow cytometry; Immune system; Immunology","score_opus":0.005109485075661353,"score_gpt":0.21321507818450422,"score_spread":0.20810559310884286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050589157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957961,0.0013217868,0.001028568,0.000042647884,0.00003074499,0.00003622459,0.0007743674,0.00003588354,0.0009337168],"genre_scores_gemma":[0.9924395,0.0008109313,0.0004080978,0.0000870927,0.000021889893,0.00008620324,0.002377599,0.000017326192,0.0037512572],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997855,0.0000287384,0.000022197235,0.000045405857,0.000044955428,0.000073241135],"domain_scores_gemma":[0.99951565,0.000040025807,0.0001363735,0.000043953332,0.00006976252,0.00019426827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004015078,0.00038938108,0.00055817823,0.00050517527,0.0003290407,0.00048546554,0.00024935495,0.00068276766,0.0013909652],"category_scores_gemma":[0.00016046272,0.00010860779,0.00045265746,0.00025359556,0.00023710704,0.00049602083,0.00031979542,0.0011477607,0.0005695549],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003746608,0.0012832187,0.01082413,0.000089068024,0.000079853686,0.0006990506,0.0001745491,0.00020873427,0.97230387,0.00007879694,0.0002527873,0.01025926],"study_design_scores_gemma":[0.00028143555,0.035225157,0.30712795,0.00011544322,0.0006566259,0.00377943,0.0006967152,0.0015346874,0.64376634,0.0003199141,0.006424302,0.00007209097],"about_ca_topic_score_codex":0.0003328152,"about_ca_topic_score_gemma":0.0006517932,"teacher_disagreement_score":0.0013909652,"about_ca_system_score_codex":0.00018034912,"about_ca_system_score_gemma":0.00011569164,"threshold_uncertainty_score":0.0046532154},"labels":[],"label_agreement":null},{"id":"W2050683823","doi":"10.1016/j.jtherbio.2010.07.005","title":"Bacterial endotoxin induced hypothermia in pregnant rats: Role of tumor necrosis factor-α","year":2010,"lang":"en","type":"article","venue":"Journal of Thermal Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Hypothermia; Tumor necrosis factor alpha; Tumor necrosis factor α; Medicine; Necrosis; Physiology; Endocrinology; Internal medicine","score_opus":0.010427418906041848,"score_gpt":0.23398693066955786,"score_spread":0.22355951176351602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050683823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99307644,0.0031614362,0.002209987,0.00028738764,0.00011129905,0.000029586077,0.00024167093,0.000058486487,0.00082384486],"genre_scores_gemma":[0.9947753,0.002117737,0.0010160998,0.000069987036,0.000035782374,0.000058414484,0.00014503878,0.000019529081,0.0017620539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985254,0.000027760025,0.000012436808,0.000038052345,0.00002379818,0.000045412802],"domain_scores_gemma":[0.9995859,0.000037392205,0.00016946024,0.00006576809,0.000028574608,0.00011282727],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025086966,0.00054899126,0.00051168207,0.00032853446,0.00021442458,0.0003173142,0.0002493787,0.00035632207,0.0012670212],"category_scores_gemma":[0.00036385152,0.00036242092,0.00029473111,0.00014950901,0.0007186216,0.00035335083,0.00026376967,0.0011569738,0.00019177256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012602798,0.0002600377,0.0025708147,0.00013225056,0.000030195999,0.00074579933,0.00019334962,0.00016594281,0.9754402,0.00056726387,0.00012819558,0.0071630436],"study_design_scores_gemma":[0.00024308768,0.00409806,0.033267982,0.00004926353,0.00019603182,0.000993376,0.00042756775,0.0012109914,0.9573394,0.0005560253,0.0015862967,0.000031890086],"about_ca_topic_score_codex":0.000915124,"about_ca_topic_score_gemma":0.0012260677,"teacher_disagreement_score":0.0012670212,"about_ca_system_score_codex":0.0004617284,"about_ca_system_score_gemma":0.0006084684,"threshold_uncertainty_score":0.0042386055},"labels":[],"label_agreement":null},{"id":"W2050812382","doi":"10.1097/ta.0b013e3181e65133","title":"Reducing Leukocyte Trafficking Preserves Hepatic Function After Sepsis","year":2010,"lang":"en","type":"article","venue":"The Journal of Trauma: Injury, Infection, and Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Care Foundation","funders":"","keywords":"Sepsis; Aspartate transaminase; Medicine; Intravital microscopy; Internal medicine; Endocrinology; Myeloperoxidase; Andrology; Inflammation; Immunology; Chemistry; Microcirculation; Enzyme; Biochemistry","score_opus":0.008863823796262655,"score_gpt":0.2644683511018208,"score_spread":0.25560452730555816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050812382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965299,0.0011630813,0.001727694,0.00007736315,0.00002106934,0.000014441729,0.000052845502,0.00007659349,0.00033715798],"genre_scores_gemma":[0.9967997,0.00085410115,0.00138149,0.00006865809,0.00002191834,0.000029450053,0.00015943538,0.000013110926,0.0006720451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998872,0.00002246713,0.000011538295,0.000015825943,0.000026591722,0.000036318615],"domain_scores_gemma":[0.99985456,0.000013122616,0.000058700483,0.000015924074,0.000021707252,0.000036073696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017532163,0.00048054272,0.00038004847,0.00013212423,0.00011936627,0.00033811718,0.00014124978,0.00024807913,0.000897841],"category_scores_gemma":[0.00018953336,0.000068684094,0.00016665929,0.00008805545,0.00024298251,0.00018986344,0.000207059,0.0005162843,0.00028826736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013742504,0.00011188299,0.0007442619,0.00009012747,0.000012414654,0.00008268677,0.000015265292,0.00016689858,0.9878001,0.000054990567,0.00006597326,0.009481315],"study_design_scores_gemma":[0.00017978557,0.0060030688,0.013532506,0.00004509525,0.00006753317,0.0007756148,0.00006207117,0.0018844252,0.97565764,0.00012999272,0.0016511417,0.000011024981],"about_ca_topic_score_codex":0.00012681296,"about_ca_topic_score_gemma":0.00012089424,"teacher_disagreement_score":0.000897841,"about_ca_system_score_codex":0.00015962964,"about_ca_system_score_gemma":0.000296982,"threshold_uncertainty_score":0.0030035973},"labels":[],"label_agreement":null},{"id":"W2050897729","doi":"10.1016/j.neuroscience.2007.01.004","title":"Innate immune receptor expression in normal brain aging","year":2007,"lang":"en","type":"article","venue":"Neuroscience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":175,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Innate immune system; Neuroscience; Immune system; Receptor; Biology; Immune receptor; Cell biology; Immunology; Genetics","score_opus":0.010365751385129286,"score_gpt":0.2544196301003393,"score_spread":0.24405387871521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050897729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993601,0.0040554823,0.0009745171,0.00014966997,0.00004721803,0.0000050039994,0.00011040951,0.000020962025,0.0010355252],"genre_scores_gemma":[0.99438334,0.0015908839,0.00066773326,0.000055182794,0.000026112812,0.000016321714,0.00012309372,0.000008977795,0.0031283777],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998847,0.000013519504,0.000008976897,0.00002539064,0.000022728764,0.00004462158],"domain_scores_gemma":[0.99988663,0.000009217075,0.00002689326,0.00001078815,0.000031576445,0.000034826902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026308076,0.00021457879,0.00032151194,0.00046020982,0.00023651659,0.00035471862,0.00019981312,0.0003058982,0.0010120812],"category_scores_gemma":[0.0002801773,0.00014394973,0.00016275828,0.00015279441,0.00044831305,0.0005431134,0.00020599956,0.00041003918,0.0001496652],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011952164,0.000048101992,0.0031091862,0.000058758113,0.00001526,0.0004955795,0.00017363243,0.00006348846,0.98418427,0.0010399695,0.00031954047,0.009297057],"study_design_scores_gemma":[0.00004942013,0.0011128595,0.26345855,0.00004197601,0.00013107718,0.004740217,0.0013119456,0.0011728866,0.7163859,0.0038615682,0.007693331,0.000040302926],"about_ca_topic_score_codex":0.0009777416,"about_ca_topic_score_gemma":0.0011013084,"teacher_disagreement_score":0.0010120812,"about_ca_system_score_codex":0.000477809,"about_ca_system_score_gemma":0.00028582924,"threshold_uncertainty_score":0.0034667253},"labels":[],"label_agreement":null},{"id":"W2050940395","doi":"10.1097/01.ccm.0000129975.26905.77","title":"Delayed neutrophil apoptosis in sepsis is associated with maintenance of mitochondrial transmembrane potential and reduced caspase-9 activity*","year":2004,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":227,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Public Health; University Health Network","funders":"","keywords":"Pyrrolidine dithiocarbamate; Apoptosis; Lipopolysaccharide; Medicine; Caspase; Immunology; Tumor necrosis factor alpha; Caspase 3; Programmed cell death; Inflammation; NF-κB; Biology; Biochemistry","score_opus":0.008960113477398631,"score_gpt":0.251416315711512,"score_spread":0.24245620223411338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050940395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998705,0.0007276078,0.00039568046,0.000020936783,0.000004397676,0.000008859057,0.000052913692,0.000005505006,0.000079096324],"genre_scores_gemma":[0.9991037,0.0003023261,0.00028449518,0.000015000086,0.000008885942,0.000011328427,0.00016410559,0.0000014929718,0.00010848228],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974316,0.000066113644,0.00003512277,0.000043751574,0.00006728883,0.00004443234],"domain_scores_gemma":[0.9992273,0.00009825166,0.00043266677,0.00004160301,0.00008844257,0.000111827256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038003922,0.00034750643,0.00036783458,0.00027194893,0.00016594287,0.00026461828,0.00013942666,0.0003374337,0.0010558295],"category_scores_gemma":[0.0010515973,0.00014963066,0.00017916237,0.00019478155,0.00025111448,0.00019899482,0.00027940347,0.00034534224,0.00021652177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01091753,0.00047049933,0.43399668,0.00043587905,0.00011404978,0.0050329957,0.00031334764,0.00027019292,0.52973026,0.00014497472,0.00034169477,0.018231956],"study_design_scores_gemma":[0.00016188339,0.005240605,0.91404235,0.000051541483,0.000089887544,0.0244067,0.0002215454,0.000897918,0.05389699,0.00014606839,0.0008273034,0.0000172102],"about_ca_topic_score_codex":0.00015002096,"about_ca_topic_score_gemma":0.0001410994,"teacher_disagreement_score":0.0010558295,"about_ca_system_score_codex":0.00016327621,"about_ca_system_score_gemma":0.00017862914,"threshold_uncertainty_score":0.0035321116},"labels":[],"label_agreement":null},{"id":"W2050965415","doi":"10.1016/j.vaccine.2014.03.014","title":"The adjuvant PCEP induces recruitment of myeloid and lymphoid cells at the injection site and draining lymph node","year":2014,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Bill and Melinda Gates Foundation","keywords":"Immune system; Biology; CCL19; Immunology; Lymphatic system; Adjuvant; Chemokine; Lymph; Chemokine receptor; Medicine; Pathology","score_opus":0.013493208882897994,"score_gpt":0.23042847737569172,"score_spread":0.21693526849279374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2050965415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882032,0.0018939277,0.0055225585,0.00024691122,0.00012670361,0.0001275771,0.00039357142,0.00010052076,0.0033849506],"genre_scores_gemma":[0.9871826,0.0010333863,0.004061327,0.00022537775,0.00008639377,0.00011474167,0.00047200918,0.000028530425,0.006795571],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997435,0.000035784415,0.000014959489,0.000040474566,0.000057829537,0.00010745184],"domain_scores_gemma":[0.9998099,0.000047409703,0.000041527663,0.00002613246,0.00002325617,0.000051900075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022422771,0.00047774386,0.00032484284,0.0004445977,0.00017687074,0.0004106706,0.0001956967,0.0005453907,0.0021738156],"category_scores_gemma":[0.00024651497,0.00020224974,0.0002687069,0.00015166843,0.0002661963,0.00040109293,0.00036165712,0.0017473815,0.0006878056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069487793,0.00024763015,0.0004158044,0.00008999929,0.000006248404,0.00011324616,0.000035737638,0.00018407014,0.99147964,0.00030924118,0.00015967908,0.006263819],"study_design_scores_gemma":[0.00011497716,0.0021006593,0.011032536,0.000045097644,0.000036799618,0.0003998853,0.00012253107,0.0019041535,0.98015803,0.00036138672,0.0037135903,0.000010419601],"about_ca_topic_score_codex":0.00034340852,"about_ca_topic_score_gemma":0.0009892305,"teacher_disagreement_score":0.0021738156,"about_ca_system_score_codex":0.0003149666,"about_ca_system_score_gemma":0.00050379924,"threshold_uncertainty_score":0.0072721243},"labels":[],"label_agreement":null},{"id":"W2051219195","doi":"10.1016/j.dci.2008.07.007","title":"Humoral and cellular factors of maternal immunity in swine","year":2008,"lang":"en","type":"review","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":265,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Immunity; Humoral immunity; Cellular immunity; Immunology; Biology; Immune system","score_opus":0.06336123879015336,"score_gpt":0.30890585900127826,"score_spread":0.2455446202111249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051219195","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020725522,0.99825937,0.00021647451,0.00021576119,0.0003845853,0.0000027351869,0.000012993649,0.000004634478,0.0006961639],"genre_scores_gemma":[0.00081386487,0.9973242,0.00022814065,0.00016584106,0.00054735114,0.000004332256,0.00003995984,9.367428e-7,0.0008753431],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983954,0.00002200939,0.00003008832,0.00004101361,0.00005088682,0.000016465669],"domain_scores_gemma":[0.9996518,0.00015892182,0.00004858893,0.000011888359,0.00009332353,0.00003551318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009257266,0.0011507877,0.0017146089,0.0015403279,0.0002282504,0.0010612812,0.001202976,0.0014258045,0.002166028],"category_scores_gemma":[0.000505203,0.00037300625,0.00038801448,0.0016593159,0.000893475,0.0014674084,0.00075124303,0.0015704272,0.0013540573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017459878,0.00006883138,0.00047582644,0.008242426,0.00007758858,0.0003807345,0.000058747333,0.0003566497,0.0060785348,0.0024848208,0.018752582,0.9628488],"study_design_scores_gemma":[0.000045945995,0.00023906144,0.0031675422,0.0029273583,0.00023676328,0.00239859,0.00016472468,0.00017908597,0.0018726625,0.003174216,0.98556083,0.000033272332],"about_ca_topic_score_codex":0.0014204598,"about_ca_topic_score_gemma":0.0022539203,"teacher_disagreement_score":0.002166028,"about_ca_system_score_codex":0.0006637796,"about_ca_system_score_gemma":0.0010670891,"threshold_uncertainty_score":0.007246077},"labels":[],"label_agreement":null},{"id":"W2051325974","doi":"10.1016/j.cyto.2005.05.001","title":"Effect of pro-inflammatory cytokines on spontaneous apoptosis in leukocyte sub-sets within a whole blood culture","year":2005,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Apoptosis; Immunology; Cytokine; Tumor necrosis factor alpha; Immune system; Whole blood; Proinflammatory cytokine; Biology; Population; Inflammation; Medicine; Biochemistry","score_opus":0.005228415786726795,"score_gpt":0.22676834751977998,"score_spread":0.2215399317330532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051325974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99009806,0.002860477,0.0046883994,0.000115474,0.00018279764,0.00013313189,0.00043888946,0.000070206974,0.0014124505],"genre_scores_gemma":[0.98812544,0.0012660668,0.006068121,0.00010308335,0.00014733024,0.000176773,0.0012414865,0.000026603706,0.0028450654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846673,0.00062190875,0.00019823236,0.00016870096,0.00025245297,0.0002921036],"domain_scores_gemma":[0.9983456,0.00091822597,0.0001382919,0.00025576708,0.00021199023,0.00013013206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011606257,0.00060387363,0.0011667035,0.0004187388,0.0003666025,0.000696226,0.000625977,0.00041617444,0.0029051641],"category_scores_gemma":[0.0008726099,0.00020222833,0.0005712239,0.0005652202,0.00034275354,0.0003522876,0.00051089865,0.0014270493,0.0007910527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009489076,0.00084197085,0.0012777351,0.00013975886,0.00006733721,0.00029165382,0.00029394412,0.00040908798,0.98143595,0.00020143976,0.00021359125,0.005338417],"study_design_scores_gemma":[0.00014632479,0.0024506883,0.0029895485,0.000010865896,0.00005219735,0.00016090572,0.00006539988,0.0017813391,0.9915583,0.000058043453,0.00071754836,0.000008824413],"about_ca_topic_score_codex":0.00043972934,"about_ca_topic_score_gemma":0.00077667885,"teacher_disagreement_score":0.0029051641,"about_ca_system_score_codex":0.00030317684,"about_ca_system_score_gemma":0.00042556153,"threshold_uncertainty_score":0.009718716},"labels":[],"label_agreement":null},{"id":"W2051348897","doi":"10.1038/sj.thj.6200023","title":"Polymorphonuclear leukocytes released from the bone marrow by granulocyte colony-stimulating factor: intravascular behavior","year":2000,"lang":"en","type":"article","venue":"The Hematology Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital","funders":"","keywords":"Granulocytosis; Granulocyte colony-stimulating factor; Bone marrow; Granulocyte; Endocrinology; Leukocytosis; Internal medicine; Chemistry; Medicine; Immunology; Chemotherapy","score_opus":0.008466503363910326,"score_gpt":0.2163826994438737,"score_spread":0.20791619607996337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051348897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9894483,0.004446964,0.0028100451,0.00020076713,0.000041162242,0.000021838388,0.0000747784,0.00004261712,0.0029135463],"genre_scores_gemma":[0.996411,0.0009170088,0.0012788868,0.00006660304,0.00003805531,0.000013290431,0.00007452332,0.000007942076,0.001192666],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999058,0.00003118186,0.0000054753086,0.000011411088,0.000022843004,0.000023255252],"domain_scores_gemma":[0.99985206,0.00004007706,0.000029614306,0.000019043657,0.000025002113,0.000034151257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001433808,0.0002567319,0.00019539708,0.00025936143,0.00015205913,0.00042421278,0.00014638997,0.0003327416,0.0007835855],"category_scores_gemma":[0.0002719772,0.000111924164,0.00011442281,0.0001470625,0.00017520314,0.0002513835,0.00019279175,0.00030234957,0.00029983092],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005862665,0.00004594747,0.0033489815,0.00003280322,0.000007140205,0.000392651,0.00010701604,0.00011727918,0.9806308,0.0011192843,0.0001922576,0.013419607],"study_design_scores_gemma":[0.00025725242,0.0025410603,0.09964188,0.000044535518,0.00013658067,0.0051050433,0.0005279608,0.007976947,0.869847,0.0032788033,0.010602211,0.000040665534],"about_ca_topic_score_codex":0.00018706558,"about_ca_topic_score_gemma":0.00024660947,"teacher_disagreement_score":0.0007835855,"about_ca_system_score_codex":0.00015784046,"about_ca_system_score_gemma":0.00010975007,"threshold_uncertainty_score":0.0026213527},"labels":[],"label_agreement":null},{"id":"W2051354044","doi":"10.1097/nen.0b013e3181492a7","title":"Th1 Polarization of CD4+ T Cells by Toll-Like Receptor 3-Activated Human Microglia","year":2007,"lang":"en","type":"article","venue":"Journal of Neuropathology & Experimental Neurology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Microglia; Biology; Cell biology; TLR2; Immunology; Major histocompatibility complex; Toll-like receptor; Immune system; Receptor; TLR4; TLR3; Innate immune system; Inflammation","score_opus":0.007316405074849299,"score_gpt":0.24773755013564872,"score_spread":0.24042114506079942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051354044","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99406683,0.002100978,0.0012817344,0.000079889665,0.000025788295,0.000032590444,0.00016395109,0.000033934106,0.002214158],"genre_scores_gemma":[0.99591774,0.001144376,0.001373796,0.00008988206,0.0000332291,0.000044628112,0.00022460328,0.00000918147,0.0011627078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997936,0.00007885751,0.00001446103,0.00002394886,0.000032624197,0.000056522113],"domain_scores_gemma":[0.99993014,0.000022239565,0.00001445614,0.000012914491,0.000010033894,0.000010213387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021751352,0.00037501418,0.00017771717,0.00015122148,0.0001468376,0.0003669684,0.0000887803,0.00022415996,0.0011445617],"category_scores_gemma":[0.00022467307,0.00012519608,0.00018558957,0.00008773251,0.00015546207,0.00012898904,0.00014947493,0.000320579,0.00045272676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007925817,0.000064549386,0.0008535741,0.000072643525,0.0000072810844,0.0002474103,0.000079189,0.00017056087,0.9910302,0.00011500141,0.00014970487,0.006417136],"study_design_scores_gemma":[0.00021273593,0.0016512439,0.01224323,0.00005947486,0.000048438655,0.0018237034,0.000258781,0.002045847,0.97396517,0.00047932687,0.0071955873,0.000016524584],"about_ca_topic_score_codex":0.0003127938,"about_ca_topic_score_gemma":0.00035370069,"teacher_disagreement_score":0.0011445617,"about_ca_system_score_codex":0.00020149347,"about_ca_system_score_gemma":0.00015764673,"threshold_uncertainty_score":0.0038289428},"labels":[],"label_agreement":null},{"id":"W2051821508","doi":"10.1186/cc14058","title":"Immunomodulation and infection: identification of small molecule TLR3 blockers to combat deleterious inflammation in pneumonia","year":2014,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Children's Health Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina; Financiadora de Estudos e Projetos; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Japan Society for the Promotion of Science; Russian Foundation for Basic Research; London Health Sciences Centre","keywords":"Medicine; TLR3; Immune system; Pneumonia; Inflammation; Immunology; Sepsis; Toll-like receptor; Cytokine; Innate immune system; Internal medicine","score_opus":0.008472333326248329,"score_gpt":0.2509146003455887,"score_spread":0.24244226701934038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2051821508","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9635279,0.022424538,0.008513679,0.00050052727,0.000105693514,0.00029535365,0.00032462436,0.00011777141,0.004189934],"genre_scores_gemma":[0.97996163,0.010959031,0.0059313346,0.00034848606,0.000069071306,0.00017026489,0.00033630902,0.00001725415,0.0022066543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999268,0.000020138626,0.0000046602454,0.000009720181,0.000012819422,0.000025798974],"domain_scores_gemma":[0.9999331,0.000013335757,0.00001748938,0.0000047236977,0.000009427491,0.000021815053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022389789,0.00037656035,0.0003164013,0.00027921624,0.00013476974,0.00030963568,0.00019813376,0.00032792834,0.0012635805],"category_scores_gemma":[0.0001254175,0.000109560395,0.0002900328,0.00012962292,0.00018030837,0.00028133902,0.00019331378,0.00058281224,0.00029318017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048577142,0.0003613253,0.00016959033,0.00015911662,0.000015785703,0.00009524067,0.000020271451,0.00030357068,0.9836578,0.00029204658,0.0001793347,0.014260158],"study_design_scores_gemma":[0.00045129412,0.01071777,0.0037231667,0.00005633728,0.00008831399,0.0007452414,0.00003275796,0.0014098445,0.9726203,0.0002397397,0.009895194,0.000020050833],"about_ca_topic_score_codex":0.00015339468,"about_ca_topic_score_gemma":0.00042436426,"teacher_disagreement_score":0.0012635805,"about_ca_system_score_codex":0.0001829614,"about_ca_system_score_gemma":0.00023024862,"threshold_uncertainty_score":0.004227102},"labels":[],"label_agreement":null},{"id":"W2052169601","doi":"10.1155/2012/560817","title":"New Insights into the Immunological Changes in IL-10-Deficient Mice during the Course of Spontaneous Inflammation in the Gut Mucosa","year":2012,"lang":"en","type":"article","venue":"Clinical and Developmental Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Fundação de Amparo à Pesquisa do Estado de Minas Gerais; Conselho Nacional de Desenvolvimento Científico e Tecnológico","keywords":"Inflammation; Immunology; Intestinal mucosa; Biology; Pathology; Medicine; Internal medicine","score_opus":0.019176821495540328,"score_gpt":0.2734709304137074,"score_spread":0.25429410891816706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052169601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99409866,0.001991764,0.0025746976,0.00012873685,0.00002502792,0.000013142445,0.00041766645,0.000107554835,0.0006428131],"genre_scores_gemma":[0.9893215,0.0026599152,0.004933495,0.00014631054,0.000037379683,0.000042725027,0.0005379172,0.000058611542,0.0022620782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999869,0.000020272151,0.000017296847,0.000035210134,0.000026568272,0.000031695843],"domain_scores_gemma":[0.99979025,0.000019469997,0.00007662733,0.000021835163,0.000015653926,0.00007618516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001614217,0.0006079113,0.00037031987,0.0006358838,0.00011521856,0.00042611727,0.00020198303,0.00051295146,0.0011216011],"category_scores_gemma":[0.00012226024,0.00027593313,0.00027095148,0.0001804174,0.00031939356,0.00042097794,0.00017135181,0.00093036355,0.0003100584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021977838,0.00003972185,0.00059987104,0.000023574134,0.0000034575924,0.00014795677,0.000016680797,0.000034711764,0.99773455,0.00005665478,0.000013852255,0.0011092018],"study_design_scores_gemma":[0.00011427037,0.0017572151,0.08233093,0.00006089702,0.00013507142,0.004591348,0.00032692708,0.0019092626,0.90397733,0.00067199825,0.0040975,0.000027303488],"about_ca_topic_score_codex":0.00015319997,"about_ca_topic_score_gemma":0.00027687577,"teacher_disagreement_score":0.0011216011,"about_ca_system_score_codex":0.00015302536,"about_ca_system_score_gemma":0.000106008934,"threshold_uncertainty_score":0.003752172},"labels":[],"label_agreement":null},{"id":"W2052175235","doi":"10.1096/fj.09-135624","title":"Toll‐like receptor ligands induce polymorphonuclear leukocyte migration: key roles for leukotriene B <sub>4</sub> and platelet‐activating factor","year":2009,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Montréal; Centre hospitalier universitaire de Québec","funders":"Canadian Arthritis Network; Canadian Institutes of Health Research","keywords":"Platelet-activating factor; Receptor; Leukotriene; Chemistry; Toll-like receptor; Receptor antagonist; Lipid signaling; Biology; Pharmacology; Biochemistry; Antagonist; Immunology; Innate immune system","score_opus":0.012332793318450658,"score_gpt":0.21910305574440933,"score_spread":0.20677026242595867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052175235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796648,0.012924584,0.0040163836,0.0003219987,0.00011847534,0.000110168294,0.00045006716,0.00013852108,0.0022550968],"genre_scores_gemma":[0.98397636,0.0053953505,0.005270093,0.00023665896,0.000077275756,0.00015677417,0.00089382834,0.000017611159,0.0039759283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998006,0.000058096906,0.000017205182,0.000024944216,0.000031043222,0.00006823745],"domain_scores_gemma":[0.9999354,0.000009319261,0.000021304084,0.000008350338,0.000006845507,0.000018803461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018216536,0.00068373134,0.00024123762,0.00021748655,0.00014184676,0.00028722134,0.000113917,0.00037962006,0.0017124123],"category_scores_gemma":[0.00012349169,0.000114303395,0.0003099742,0.00015080362,0.00015257589,0.00017358352,0.0002150794,0.0004070099,0.00081024563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035594756,0.000057830865,0.00014258563,0.00011542268,0.0000060966013,0.0000672793,0.000013301733,0.000029221717,0.99575293,0.00005889307,0.0001238588,0.0032766275],"study_design_scores_gemma":[0.00007302074,0.0012332061,0.009353873,0.00001971623,0.000029341929,0.00089506013,0.000046159657,0.0007293326,0.98155457,0.000102587095,0.0059555355,0.0000076385695],"about_ca_topic_score_codex":0.0002723067,"about_ca_topic_score_gemma":0.00048926234,"teacher_disagreement_score":0.0017124123,"about_ca_system_score_codex":0.00026274537,"about_ca_system_score_gemma":0.00014761872,"threshold_uncertainty_score":0.0057286024},"labels":[],"label_agreement":null},{"id":"W2052356526","doi":"10.1371/journal.ppat.1004648","title":"CXCL9 Contributes to Antimicrobial Protection of the Gut during Citrobacter rodentium Infection Independent of Chemokine-Receptor Signaling","year":2015,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"Canadian Institutes of Health Research; McMaster University","keywords":"Citrobacter rodentium; CXCL9; Microbiology; CXCR3; Biology; Chemokine; Immune system; Chemokine receptor; Antimicrobial; Immunology; CXC chemokine receptors; Pathogen","score_opus":0.018645609561287427,"score_gpt":0.21029014910462238,"score_spread":0.19164453954333494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052356526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942129,0.0025685467,0.001422155,0.00025982244,0.000039731905,0.000024435669,0.00019169382,0.000118748394,0.0011619235],"genre_scores_gemma":[0.99659914,0.0007825379,0.0013673857,0.00007427547,0.000013917497,0.000017333576,0.00014454838,0.000012964296,0.0009879399],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973947,0.0000675238,0.000024255003,0.000033495602,0.000033837307,0.000101302314],"domain_scores_gemma":[0.99976844,0.000018970919,0.000071890725,0.000022630937,0.000024600091,0.000093537405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026431293,0.00040334905,0.00026401726,0.00021676137,0.00015543317,0.00034733044,0.00018436325,0.00032460387,0.0012530653],"category_scores_gemma":[0.0001827595,0.00013106366,0.00025500424,0.00009469169,0.0003827616,0.00029651998,0.00035309105,0.00057646004,0.0003015461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052474113,0.000036741014,0.0009621438,0.000091842856,0.000003922025,0.00018777621,0.000019758012,0.00006091784,0.9952655,0.00012192711,0.00008489257,0.0026398909],"study_design_scores_gemma":[0.00017998481,0.001864814,0.061787866,0.00007071832,0.000052455147,0.0029520998,0.00019683827,0.0023957316,0.9243451,0.00032745785,0.005805763,0.000021266562],"about_ca_topic_score_codex":0.0003288481,"about_ca_topic_score_gemma":0.00046769192,"teacher_disagreement_score":0.0012530653,"about_ca_system_score_codex":0.0002547668,"about_ca_system_score_gemma":0.00025237747,"threshold_uncertainty_score":0.004191935},"labels":[],"label_agreement":null},{"id":"W2052365021","doi":"10.1074/jbc.m110.115022","title":"TRIF Modulates TLR5-dependent Responses by Inducing Proteolytic Degradation of TLR5","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; McGill University; Flight Attendant Medical Research Institute","keywords":"TRIF; TLR5; Signal transducing adaptor protein; Cell biology; TLR3; TLR2; HEK 293 cells; Chemistry; Protein degradation; Toll-like receptor; Signal transduction; Biology; Receptor; Biochemistry; TLR4; Innate immune system","score_opus":0.015840671842422983,"score_gpt":0.24443134598999056,"score_spread":0.22859067414756756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052365021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898919,0.004030893,0.0031606392,0.00015617146,0.000042681142,0.000040741506,0.00043612116,0.000065972825,0.002174826],"genre_scores_gemma":[0.9940316,0.0015343787,0.0021357348,0.00012035032,0.000015206561,0.000032289172,0.00080050924,0.000011637348,0.0013183102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967134,0.000092026945,0.00003512296,0.000037153073,0.00005921692,0.00010512774],"domain_scores_gemma":[0.9998715,0.00001324894,0.00004930702,0.000011244026,0.000020335636,0.000034267316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024702505,0.000358751,0.00019504546,0.00022170009,0.00014868144,0.0002463209,0.00015354205,0.0002832432,0.0011554175],"category_scores_gemma":[0.00014496215,0.00010547131,0.00036833127,0.00009659192,0.00015755309,0.0002320346,0.00021033164,0.0004849986,0.0004421011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016384771,0.00002297252,0.00023594564,0.00007377592,0.0000060798416,0.000046472414,0.000008707277,0.000038936545,0.998434,0.00006535773,0.000046971723,0.0008568647],"study_design_scores_gemma":[0.00002176162,0.00028497734,0.006540486,0.000015551275,0.000022121187,0.0004508487,0.000037512385,0.001088395,0.98890823,0.000034724202,0.0025896016,0.0000056268173],"about_ca_topic_score_codex":0.00027683697,"about_ca_topic_score_gemma":0.0003515311,"teacher_disagreement_score":0.0011554175,"about_ca_system_score_codex":0.0002529185,"about_ca_system_score_gemma":0.00016029894,"threshold_uncertainty_score":0.003865242},"labels":[],"label_agreement":null},{"id":"W2053185103","doi":"10.1002/ibd.20808","title":"Reduced expression of basal and probiotic-inducible G-CSF in intestinal mononuclear cells is associated with inflammatory bowel disease","year":2008,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; London Health Sciences Centre; Western University","funders":"","keywords":"Peripheral blood mononuclear cell; Cytokine; Proinflammatory cytokine; Lamina propria; Biology; Lactobacillus rhamnosus; Immunology; Inflammatory bowel disease; Tumor necrosis factor alpha; Inflammation; Internal medicine; Medicine; Probiotic; Epithelium; In vitro","score_opus":0.009917583682421861,"score_gpt":0.20864540205619736,"score_spread":0.1987278183737755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053185103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981828,0.001058756,0.00034347738,0.000029481385,0.00000624731,0.0000057179477,0.00017264806,0.000025006473,0.00017590084],"genre_scores_gemma":[0.9984785,0.0004029651,0.0005574623,0.0000330074,0.000010154015,0.000012439322,0.00033671802,0.000009511762,0.00015939941],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998715,0.000019975296,0.000017310209,0.000039064664,0.000025464216,0.000026655034],"domain_scores_gemma":[0.99962044,0.00003427868,0.00021332575,0.000019420944,0.000025731099,0.00008683915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012231016,0.0003200861,0.00033898416,0.00058660295,0.00013308838,0.00026403615,0.0001548958,0.0003884742,0.0010812697],"category_scores_gemma":[0.00035599832,0.00011533035,0.00019371528,0.00035399265,0.0002525248,0.00010487187,0.00020896478,0.00038453817,0.00022142041],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029137954,0.00008371511,0.07018469,0.00021403491,0.00006710679,0.0013163297,0.000087288354,0.000051623803,0.9195974,0.000044188408,0.00015014998,0.0052896715],"study_design_scores_gemma":[0.0000790688,0.0010445322,0.8887386,0.00006701062,0.00025187514,0.009321799,0.00021991033,0.0005305227,0.09737204,0.00013728079,0.0022236353,0.000013782145],"about_ca_topic_score_codex":0.00022336355,"about_ca_topic_score_gemma":0.00017736996,"teacher_disagreement_score":0.0010812697,"about_ca_system_score_codex":0.00014200089,"about_ca_system_score_gemma":0.0000736548,"threshold_uncertainty_score":0.0036171675},"labels":[],"label_agreement":null},{"id":"W2053317387","doi":"10.1016/j.meegid.2004.07.002","title":"Detection of a single nucleotide polymorphism in the IL-6 promoter region of ancient nuclear DNA","year":2004,"lang":"en","type":"article","venue":"Infection Genetics and Evolution","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University; University of Manitoba","funders":"University of Manitoba; Canada Research Chairs; Wenner-Gren Foundation","keywords":"Single-nucleotide polymorphism; SNP; Biology; Genetics; Ancient DNA; DNA; Nuclear DNA; Polymorphism (computer science); Molecular biology; Gene; Genotype; Medicine; Population","score_opus":0.0101092291184338,"score_gpt":0.19919470591185562,"score_spread":0.18908547679342183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053317387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99595803,0.00022825417,0.0029361795,0.00004784741,0.000021483831,0.000010920305,0.00019992511,0.000017641454,0.0005798033],"genre_scores_gemma":[0.9972851,0.00013653257,0.0017629233,0.000047235175,0.000019073383,0.0000072426433,0.00023701231,0.000005616561,0.0004992634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998405,0.000029853318,0.000010642833,0.000053422795,0.000047241363,0.000018340059],"domain_scores_gemma":[0.9992151,0.00030291025,0.00017221291,0.00006893336,0.00010439416,0.00013644631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021031479,0.00019220532,0.00022899873,0.00054294,0.0002221849,0.00022072546,0.0002251118,0.00048507535,0.001214859],"category_scores_gemma":[0.0007867275,0.00015020576,0.00028572735,0.00032088542,0.00050347496,0.000108575274,0.00023498273,0.0005443303,0.0003384842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004125114,0.000039006416,0.023730831,0.00004667317,0.00003185348,0.00039600264,0.00024188004,0.00008161252,0.9696055,0.00020694836,0.00002192946,0.005185229],"study_design_scores_gemma":[0.00015019052,0.0012911008,0.683765,0.00011633727,0.0003186935,0.009479832,0.00040507418,0.0023432227,0.29714644,0.00083259813,0.004100694,0.000050781116],"about_ca_topic_score_codex":0.00059509673,"about_ca_topic_score_gemma":0.0007224511,"teacher_disagreement_score":0.001214859,"about_ca_system_score_codex":0.00014641887,"about_ca_system_score_gemma":0.00014080894,"threshold_uncertainty_score":0.0040641427},"labels":[],"label_agreement":null},{"id":"W2053454515","doi":"10.1016/j.vetimm.2014.12.005","title":"Expression profiles of antiviral response genes in chicken bursal cells stimulated with Toll-like receptor ligands","year":2014,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Guelph","funders":"","keywords":"Biology; Toll-like receptor; IRF7; TLR3; Immune system; Innate immune system; TLR7; Interferon; Lipopolysaccharide; Receptor; TLR9; TLR5; Gene; Molecular biology; Cell biology; Virology; Immunology; Gene expression; Genetics","score_opus":0.007994407433798853,"score_gpt":0.224315649516117,"score_spread":0.21632124208231812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053454515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967494,0.0007365478,0.00030264579,0.000048073947,0.00003320801,0.000009348028,0.0009363427,0.000007675892,0.0011768391],"genre_scores_gemma":[0.99186933,0.0006360224,0.00066691014,0.00010043049,0.000019827869,0.000045760735,0.0016843894,0.000007455339,0.0049697733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998826,0.000010842835,0.00000850294,0.000037902784,0.000019521161,0.00004064968],"domain_scores_gemma":[0.9998983,0.000032834814,0.000014254479,0.0000077828745,0.000021399039,0.000025306592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008541033,0.00018871808,0.00023937672,0.0002933211,0.00021099388,0.00035469155,0.00007257849,0.00024961017,0.001396445],"category_scores_gemma":[0.00010283338,0.00014024068,0.00026446948,0.0002755191,0.00025624136,0.00015479981,0.00013439514,0.00039567097,0.0003319128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041210605,0.000008869468,0.000924673,0.000031197134,0.000004480088,0.00004324788,0.00006859676,0.000029587005,0.9979753,0.000038797516,0.00003209713,0.00043104426],"study_design_scores_gemma":[0.00007117619,0.0010284832,0.22629842,0.000039078142,0.000104966115,0.0003990755,0.0016700451,0.0015055338,0.7644275,0.0001335096,0.004294208,0.000028013194],"about_ca_topic_score_codex":0.0011822799,"about_ca_topic_score_gemma":0.0016590806,"teacher_disagreement_score":0.001396445,"about_ca_system_score_codex":0.00018865889,"about_ca_system_score_gemma":0.000154423,"threshold_uncertainty_score":0.0046715736},"labels":[],"label_agreement":null},{"id":"W2053504378","doi":"10.1021/jf060169h","title":"<i>Quillaja</i>Saponin Can Modulate Ovalbumin-Induced IgE Allergic Responses through Regulation of Th1/Th2 Balance in a Murine Model","year":2006,"lang":"en","type":"article","venue":"Journal of Agricultural and Food Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Saponin; Ovalbumin; Immunoglobulin E; Histamine; Immune system; Immunology; Spleen; Chemistry; Allergy; Pharmacology; Antibody; Biology; Medicine","score_opus":0.009067727806780251,"score_gpt":0.2021744404740618,"score_spread":0.19310671266728155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053504378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996624,0.0012722813,0.0006821413,0.00012482378,0.000038382615,0.000035902864,0.00018798876,0.00008269751,0.0009517545],"genre_scores_gemma":[0.9963921,0.00094910414,0.000942827,0.00016096975,0.000027349555,0.0000377962,0.00024977914,0.000008330061,0.0012316811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999362,0.000011633798,0.0000062653303,0.000010468446,0.000012415048,0.000022898139],"domain_scores_gemma":[0.99995065,0.0000055351866,0.00002002126,0.000003538211,0.000006722828,0.000013558487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011017537,0.00042622897,0.00025195818,0.00024425282,0.00013647717,0.00019759097,0.00014584658,0.0002367332,0.0007192615],"category_scores_gemma":[0.00005371302,0.00010145332,0.00020170608,0.00010936843,0.00020282349,0.00023475187,0.00007925601,0.00036941,0.00014373548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065070676,0.00014733002,0.00019799765,0.0000844326,0.000007753095,0.00006301332,0.000008139826,0.00003703299,0.99735487,0.000045551486,0.00006912152,0.0013340805],"study_design_scores_gemma":[0.00015215848,0.0047028693,0.012189407,0.00001658938,0.000088122215,0.00044643393,0.000026431448,0.0009082199,0.97903466,0.000088934314,0.0023374239,0.000008753786],"about_ca_topic_score_codex":0.00041275032,"about_ca_topic_score_gemma":0.0005657012,"teacher_disagreement_score":0.0007192615,"about_ca_system_score_codex":0.00017428573,"about_ca_system_score_gemma":0.00013704406,"threshold_uncertainty_score":0.0024061203},"labels":[],"label_agreement":null},{"id":"W2053941125","doi":"10.1074/jbc.m109.033670","title":"pH-dependent Internalization of Muramyl Peptides from Early Endosomes Enables Nod1 and Nod2 Signaling","year":2009,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":211,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canada Research Chairs","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Internalization; Endosome; NOD1; Endocytosis; Cell biology; NOD2; Peptidoglycan; Endocytic cycle; Cytosol; Biology; Signal transduction; Muramyl dipeptide; Chemistry; Biochemistry; Intracellular; Receptor; Innate immune system; Enzyme","score_opus":0.01273180685745421,"score_gpt":0.22332358207384032,"score_spread":0.2105917752163861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053941125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995974,0.001132184,0.0016070937,0.000060064933,0.000012158706,0.0000123192885,0.00016790982,0.000028012952,0.0010063901],"genre_scores_gemma":[0.9961274,0.00052351784,0.0017768223,0.00005533169,0.000006196297,0.00001832769,0.0003317718,0.000009567952,0.00115102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998246,0.000033848002,0.000014862749,0.000037204725,0.000040114537,0.000049321166],"domain_scores_gemma":[0.99994075,0.000009565894,0.00001626723,0.000008130012,0.000011454948,0.000013849271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012986417,0.00019483785,0.00025165998,0.00012747795,0.000120586265,0.000367789,0.000099854784,0.00028662363,0.000772483],"category_scores_gemma":[0.00012792302,0.00010754752,0.0003495822,0.00009617832,0.00017882478,0.0002773791,0.00042899064,0.00028788918,0.00029442162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009021077,0.000004537746,0.00037443658,0.000022192546,0.000002764003,0.000072740884,0.0000064078217,0.000032280328,0.99898535,0.000028620092,0.000007761269,0.0003726582],"study_design_scores_gemma":[0.000022238963,0.0001690344,0.023679629,0.0000092916625,0.000014826965,0.0009193178,0.000064521286,0.0015609469,0.97187525,0.000065304135,0.0016110751,0.000008597466],"about_ca_topic_score_codex":0.0004111563,"about_ca_topic_score_gemma":0.0004649506,"teacher_disagreement_score":0.000772483,"about_ca_system_score_codex":0.0003253688,"about_ca_system_score_gemma":0.0001500686,"threshold_uncertainty_score":0.002584219},"labels":[],"label_agreement":null},{"id":"W2054165177","doi":"10.1016/j.cyto.2010.07.374","title":"PS3-35 Caspase-1 processes high mobility group box 1 and is required for its release during infection and septic shock","year":2010,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Septic shock; Shock (circulatory); Medicine; Immunology; Internal medicine; Sepsis","score_opus":0.008980499551960813,"score_gpt":0.23325502313574029,"score_spread":0.22427452358377947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054165177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989953,0.0026619036,0.005264356,0.00045756533,0.000116802796,0.000034358596,0.00063633616,0.0001336108,0.0007420597],"genre_scores_gemma":[0.9938332,0.00048307655,0.0021611578,0.00009423655,0.000028133743,0.00003222733,0.0011246615,0.000032075186,0.0022113123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999537,0.00005949531,0.000038904094,0.00007658074,0.00010537457,0.00018260251],"domain_scores_gemma":[0.9995413,0.00006204995,0.00016016659,0.00006171045,0.000057620662,0.000117203504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039014703,0.0005568481,0.00042346693,0.0005011681,0.00045105646,0.0007578301,0.00031930645,0.00054354215,0.0025909152],"category_scores_gemma":[0.0005369134,0.00034897085,0.00050777954,0.0002995735,0.0007261238,0.0009364826,0.0004497234,0.0014504782,0.0011142726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001042595,0.00003081044,0.0004785799,0.000031015865,0.0000058962573,0.000090995665,0.000030576124,0.000049803246,0.9969162,0.00019101717,0.00010266994,0.0010298757],"study_design_scores_gemma":[0.00006668239,0.0003008486,0.021457706,0.000010178003,0.000016257052,0.00090824935,0.00012858296,0.0013058793,0.9736343,0.00041513998,0.0017423567,0.000013826304],"about_ca_topic_score_codex":0.0005080555,"about_ca_topic_score_gemma":0.0005396391,"teacher_disagreement_score":0.0025909152,"about_ca_system_score_codex":0.00094132224,"about_ca_system_score_gemma":0.00049716374,"threshold_uncertainty_score":0.008667529},"labels":[],"label_agreement":null},{"id":"W2054283974","doi":"10.1016/j.pupt.2015.02.002","title":"CXCR1/CXCR2 antagonist CXCL8(3-74)K11R/G31P blocks lung inflammation in swine barn dust-instilled mice","year":2015,"lang":"en","type":"article","venue":"Pulmonary Pharmacology & Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute on Alcohol Abuse and Alcoholism; National Institute for Occupational Safety and Health; Central States Center for Agricultural Safety and Health, University of Nebraska Medical Center","keywords":"Chemokine; Inflammation; Barn; Lung; Interleukin 8; Immunology; CXC chemokine receptors; Medicine; Pharmacology; Chemistry; Chemokine receptor; Internal medicine","score_opus":0.02546840546406724,"score_gpt":0.29042559831566533,"score_spread":0.2649571928515981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054283974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924981,0.00093351724,0.0023687948,0.00072775024,0.00029974015,0.000109481094,0.00066623086,0.0003128663,0.002083523],"genre_scores_gemma":[0.98925704,0.00084292324,0.0028312549,0.00021744864,0.00009949175,0.00017139249,0.0007579259,0.00004247581,0.005780016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995012,0.00007984601,0.00002872338,0.00006467817,0.00008867248,0.00023691976],"domain_scores_gemma":[0.99979573,0.000022663866,0.000050361603,0.000024797278,0.000016091577,0.00009032211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038675594,0.0006462806,0.0006908933,0.00042162236,0.00034799412,0.00030835188,0.0005637844,0.0008860564,0.002867797],"category_scores_gemma":[0.00015171342,0.0003211508,0.0005646056,0.00018695575,0.00061061996,0.0004843629,0.00018758322,0.0024303047,0.0007550465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037986874,0.001782491,0.00024130628,0.000088430934,0.00001979197,0.00012895849,0.00003094508,0.0004300956,0.98838216,0.0003446681,0.0006577222,0.0040947963],"study_design_scores_gemma":[0.00069793104,0.010928426,0.003752901,0.00001680637,0.000051810923,0.00024767633,0.0000838323,0.0037298743,0.9780151,0.00011926932,0.0023371575,0.000019140833],"about_ca_topic_score_codex":0.0014045695,"about_ca_topic_score_gemma":0.002878771,"teacher_disagreement_score":0.002867797,"about_ca_system_score_codex":0.0004058221,"about_ca_system_score_gemma":0.0008844289,"threshold_uncertainty_score":0.009593725},"labels":[],"label_agreement":null},{"id":"W2054410637","doi":"10.1097/00024382-200404000-00012","title":"BACTERIAL DNA AND RNA INDUCE RAT CARDIAC MYOCYTE CONTRACTION DEPRESSION IN VITRO","year":2004,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Laurentian University; University of Manitoba","funders":"","keywords":"RNA; Septic shock; Sepsis; Myocyte; Proinflammatory cytokine; In vitro; Shock (circulatory); Biology; Contraction (grammar); Inflammation; Microbiology; Immunology; Internal medicine; Medicine; Endocrinology; Biochemistry; Gene","score_opus":0.006737282849428542,"score_gpt":0.22059092438004027,"score_spread":0.21385364153061173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054410637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898431,0.003985711,0.002719458,0.000101933045,0.00008692568,0.00007480667,0.000401029,0.00004695527,0.0027401766],"genre_scores_gemma":[0.98580694,0.0029373076,0.0051984494,0.00012927895,0.000053806078,0.00011201975,0.001769057,0.00003009111,0.003963082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969757,0.000103499224,0.000024959349,0.000038951854,0.00006568711,0.00006947502],"domain_scores_gemma":[0.9996196,0.0001859885,0.00005379208,0.00003616682,0.000036428726,0.00006799658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042586753,0.00041876655,0.0003073443,0.0003041481,0.00012062273,0.00016549158,0.00019392576,0.00023304517,0.0013611653],"category_scores_gemma":[0.0003104814,0.00016095476,0.00023625763,0.00020479629,0.0001925074,0.000112995025,0.000281703,0.00055045635,0.00048095395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018859883,0.00007329301,0.00010058125,0.00004093517,0.0000056111758,0.000031310712,0.000024400044,0.00007024355,0.9985033,0.000034306988,0.000029987765,0.00089748594],"study_design_scores_gemma":[0.00006530481,0.0038292378,0.0036985334,0.000021434005,0.000023220793,0.000107444896,0.00003878529,0.001035082,0.9902076,0.000048219565,0.0009206421,0.000004545498],"about_ca_topic_score_codex":0.0006758947,"about_ca_topic_score_gemma":0.0015533979,"teacher_disagreement_score":0.0013611653,"about_ca_system_score_codex":0.0002047219,"about_ca_system_score_gemma":0.00021309165,"threshold_uncertainty_score":0.0045535564},"labels":[],"label_agreement":null},{"id":"W2054606341","doi":"10.1038/sj.mp.4002122","title":"MyD88 signaling in brain endothelial cells is essential for the neuronal activity and glucocorticoid release during systemic inflammation","year":2008,"lang":"en","type":"article","venue":"Molecular Psychiatry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; National Institutes of Health; Max-Planck-Gesellschaft; Canada Research Chairs; National Institute for Health and Care Research","keywords":"Microglia; Immune system; Biology; Cell biology; Inflammation; Cytokine; Endothelium; Immunology; Signal transduction; Neuroinflammation; Tumor necrosis factor alpha; Bone marrow; Blood–brain barrier; Endothelial activation; Neuroscience; Endocrinology; Central nervous system","score_opus":0.004745537437433452,"score_gpt":0.20816496821172656,"score_spread":0.20341943077429311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054606341","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922057,0.0031278383,0.002693697,0.0003826579,0.000064289576,0.00001317661,0.00031697296,0.000041445852,0.0011541665],"genre_scores_gemma":[0.99561834,0.00084780296,0.0013323205,0.00007313855,0.000022133574,0.000025299425,0.00034147452,0.000016622113,0.0017228054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999691,0.000040792904,0.000019799514,0.000048025788,0.000053754844,0.00014669915],"domain_scores_gemma":[0.9998667,0.000008766925,0.00004153715,0.00001814956,0.000020068552,0.00004479922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021526177,0.00025388392,0.00034567493,0.00022639355,0.00031218128,0.00040058416,0.00024063738,0.00032909308,0.0011453812],"category_scores_gemma":[0.0002224821,0.00022358535,0.00030161798,0.00013651323,0.00038328083,0.00041906067,0.0003883881,0.001101418,0.0003566082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009449677,0.000026907353,0.00078880345,0.00004622149,0.000010899791,0.00018040373,0.000035309527,0.000046024823,0.994898,0.00035140442,0.00018092062,0.0024900427],"study_design_scores_gemma":[0.00011124451,0.00037269338,0.14132601,0.000040464336,0.00006792794,0.0018242698,0.00037301233,0.0014171696,0.8486784,0.000908112,0.004860789,0.000019949703],"about_ca_topic_score_codex":0.0005239702,"about_ca_topic_score_gemma":0.0010195989,"teacher_disagreement_score":0.0011453812,"about_ca_system_score_codex":0.00048450788,"about_ca_system_score_gemma":0.00034395108,"threshold_uncertainty_score":0.0038317442},"labels":[],"label_agreement":null},{"id":"W2054828149","doi":"10.1038/ni.2833","title":"TLR-driven early glycolytic reprogramming via the kinases TBK1-IKKɛ supports the anabolic demands of dendritic cell activation","year":2014,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1048,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Cancer Institute","keywords":"Cell biology; Kinase; Glycolysis; Endoplasmic reticulum; Chemistry; Biology; Biochemistry; Metabolism","score_opus":0.0032475572179565173,"score_gpt":0.21457314519246268,"score_spread":0.21132558797450615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054828149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866399,0.0018562897,0.0057530925,0.00051056023,0.00016664343,0.000030491712,0.00070439104,0.00019056068,0.004147986],"genre_scores_gemma":[0.99637944,0.00054098736,0.0010479734,0.00007309311,0.000023276785,0.000017640656,0.00034006417,0.000037492366,0.0015400688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985635,0.000013313691,0.0000086741475,0.000032177264,0.000021861817,0.00006760637],"domain_scores_gemma":[0.9998653,0.000016881544,0.000032330616,0.000023312286,0.000016784086,0.00004534185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020658648,0.0003346542,0.00019959263,0.00018070904,0.00019971676,0.000655591,0.00020596222,0.00020930893,0.0032114643],"category_scores_gemma":[0.00018026332,0.00013594763,0.00024258852,0.00010888279,0.00025457912,0.00048209963,0.0005514144,0.0010498905,0.00091617275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003292725,0.000018293029,0.0001687989,0.00004572091,0.0000028555437,0.000028414923,0.0000146158045,0.000051265433,0.9974955,0.0003571461,0.000084489526,0.0014035957],"study_design_scores_gemma":[0.00002847475,0.0001071618,0.0035515656,0.0000129961345,0.000011348465,0.000114730035,0.00007151447,0.00054406095,0.9924118,0.000357638,0.002781776,0.00000677737],"about_ca_topic_score_codex":0.00020458024,"about_ca_topic_score_gemma":0.0003872254,"teacher_disagreement_score":0.0032114643,"about_ca_system_score_codex":0.00031186832,"about_ca_system_score_gemma":0.00032170204,"threshold_uncertainty_score":0.010743439},"labels":[],"label_agreement":null},{"id":"W2054979063","doi":"10.1074/jbc.c800001200","title":"The Crystal Structure of the Human Toll-like Receptor 10 Cytoplasmic Domain Reveals a Putative Signaling Dimer","year":2008,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":193,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"","keywords":"Dimer; Cytoplasm; Receptor; Toll-like receptor; Domain (mathematical analysis); Toll; Signal transduction; Cell biology; Chemistry; Biology; Genetics; Biochemistry; Innate immune system","score_opus":0.013782221973242366,"score_gpt":0.23486472451609702,"score_spread":0.22108250254285466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054979063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94378656,0.02142715,0.0065736654,0.002295148,0.0007137487,0.00016765835,0.004513204,0.00058282533,0.019940041],"genre_scores_gemma":[0.9454926,0.008103265,0.013509009,0.0014044822,0.000103752944,0.00009179447,0.015141605,0.00005275261,0.016100695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990964,0.000013830217,0.0000036376916,0.00002076815,0.000031251282,0.000020872172],"domain_scores_gemma":[0.9999317,0.000014857566,0.000010401734,0.0000025025108,0.000011538005,0.000029036986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019503059,0.0004886807,0.00035116248,0.0001223784,0.0001999351,0.00051019783,0.00031254103,0.0005184861,0.002135338],"category_scores_gemma":[0.00020782663,0.00027139825,0.00018157576,0.00027902253,0.0002287094,0.00019462097,0.0001912733,0.0007668396,0.0011184925],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024018874,0.0005247358,0.005664337,0.0012589719,0.00015156815,0.0033122536,0.0002693412,0.0055476055,0.90957695,0.0036571587,0.027779218,0.03985607],"study_design_scores_gemma":[0.0021947797,0.0021899908,0.07811395,0.0003745905,0.00045712845,0.009813684,0.0012370928,0.047376905,0.38659874,0.0045827646,0.46682015,0.00024012852],"about_ca_topic_score_codex":0.0015759171,"about_ca_topic_score_gemma":0.0024588339,"teacher_disagreement_score":0.002135338,"about_ca_system_score_codex":0.0008459258,"about_ca_system_score_gemma":0.0006733089,"threshold_uncertainty_score":0.007143438},"labels":[],"label_agreement":null},{"id":"W2054991963","doi":"10.1182/blood-2002-05-1404","title":"Mouse T cells receive costimulatory signals from LIGHT, a TNF family member","year":2002,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"T-cell receptor; Biology; CD28; Cell biology; Tumor necrosis factor alpha; T cell; Lymphokine; Molecular biology; CD3; Receptor; Immunology; Antigen; CD8; Immune system; Biochemistry","score_opus":0.016668616214025492,"score_gpt":0.20983022012728555,"score_spread":0.19316160391326007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054991963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98399526,0.0025214849,0.007778706,0.00027003087,0.00013695336,0.0000807712,0.00055820023,0.00031710026,0.004341369],"genre_scores_gemma":[0.9803577,0.0014181385,0.0064401333,0.00015135498,0.00007586894,0.00014715084,0.0010720645,0.00004782111,0.01028989],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996131,0.00006931629,0.000030694442,0.00009172666,0.00007658715,0.00011850303],"domain_scores_gemma":[0.99982834,0.000021669517,0.0000420716,0.000029078876,0.00001859641,0.00006017416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017575915,0.0008522365,0.0003124195,0.00039059215,0.000245373,0.00037141962,0.0002556001,0.00053522084,0.0024486328],"category_scores_gemma":[0.0001282923,0.00021152606,0.00037299065,0.00019516918,0.00020952598,0.000375267,0.0002997875,0.0012331618,0.0013562391],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021951448,0.000039208164,0.0001242901,0.000027228283,0.0000030299004,0.00006752684,0.000017245153,0.000018285731,0.99818593,0.00016284347,0.00004829862,0.0010866454],"study_design_scores_gemma":[0.000057974325,0.00047725753,0.0012151505,0.0000085932825,0.000018843886,0.0003206809,0.000019521014,0.00041614304,0.9935929,0.00008222959,0.003786515,0.0000042548395],"about_ca_topic_score_codex":0.00015671003,"about_ca_topic_score_gemma":0.00024264661,"teacher_disagreement_score":0.0024486328,"about_ca_system_score_codex":0.00031804838,"about_ca_system_score_gemma":0.00013420114,"threshold_uncertainty_score":0.008191466},"labels":[],"label_agreement":null},{"id":"W2055046713","doi":"10.1089/nat.2010.0275","title":"Cytosine-Phosphate-Guanine Oligodeoxynucleotides Containing GACGTT Motifs Enhance the Immune Responses Elicited by Keyhole Limpet Hemocyanin Antigen in Dairy Cattle","year":2011,"lang":"en","type":"article","venue":"Nucleic Acid Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; National Science Council","keywords":"Keyhole limpet hemocyanin; CpG Oligodeoxynucleotide; Hemocyanin; Biology; CpG site; Antigen; Immune system; Adjuvant; Molecular biology; Antibody; Immunology; Biochemistry; DNA methylation; Gene expression; Gene","score_opus":0.023202712906982562,"score_gpt":0.252195380438418,"score_spread":0.22899266753143543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055046713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99789846,0.0010969917,0.00042781312,0.000028605373,0.000012784113,0.000011990405,0.000068804664,0.0000138571995,0.00044072734],"genre_scores_gemma":[0.9975503,0.00067452417,0.0007040258,0.000050110528,0.0000095111345,0.000015022224,0.00014456054,0.0000053485187,0.0008465646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977857,0.000043177286,0.000012186241,0.000044033837,0.00005266633,0.000069367496],"domain_scores_gemma":[0.99987507,0.00003726111,0.000029206778,0.0000040956643,0.000014651802,0.000039655697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022631523,0.00039611064,0.00030017388,0.00029784342,0.000130191,0.00027041265,0.00015310754,0.00032122672,0.0005296816],"category_scores_gemma":[0.00019769782,0.00015486551,0.00019672193,0.00017814335,0.00023218396,0.00013786113,0.0001372817,0.0003852443,0.00013760292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015909826,0.00002769083,0.0002849597,0.000035364123,0.0000030523872,0.000020466694,0.000019181427,0.00004485647,0.9987538,0.000012086907,0.000009349173,0.00063011685],"study_design_scores_gemma":[0.00006017479,0.0024645498,0.017177656,0.000014130047,0.000053821626,0.0001658332,0.00010009948,0.0009096396,0.9773129,0.00005408538,0.001675869,0.0000111711915],"about_ca_topic_score_codex":0.0016332624,"about_ca_topic_score_gemma":0.002276124,"teacher_disagreement_score":0.0016332624,"about_ca_system_score_codex":0.00038933268,"about_ca_system_score_gemma":0.00019173107,"threshold_uncertainty_score":0.003247559},"labels":[],"label_agreement":null},{"id":"W2055958188","doi":"10.1097/00004770-200402000-00006","title":"Proinflammatory Cytokine Profiles in Pulp Fibroblasts Stimulated with Lipopolysaccharide and Methyl Mercaptan","year":2004,"lang":"en","type":"article","venue":"Journal of Endodontics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Lipopolysaccharide; Tumor necrosis factor alpha; Proinflammatory cytokine; Immune system; Chemistry; Interleukin; Cytokine; Anaerobic bacteria; Peripheral blood mononuclear cell; Interleukin 6; Pulp (tooth); Bacteria; Microbiology; Inflammation; Immunology; Medicine; Biology; Biochemistry; Pathology; In vitro","score_opus":0.006990188207084466,"score_gpt":0.2191926934680302,"score_spread":0.21220250526094572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2055958188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959486,0.0017589572,0.0009994985,0.000067449226,0.00007669182,0.0000405329,0.00031230084,0.000010417258,0.00078564294],"genre_scores_gemma":[0.99520797,0.0013394238,0.0013712575,0.000115254705,0.000075546464,0.00013021144,0.00038888006,0.000004466481,0.0013669936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997737,0.00005097371,0.000034793553,0.000034654007,0.00006241083,0.00004340075],"domain_scores_gemma":[0.9997067,0.00011912853,0.000047156274,0.000029463414,0.000046506186,0.00005101533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029216477,0.00035371515,0.00035953365,0.0002445637,0.00018696731,0.0002859489,0.00008204629,0.00035543522,0.00128059],"category_scores_gemma":[0.00025489365,0.00012543268,0.00030284835,0.0002276909,0.00023758861,0.00023786242,0.00015116051,0.0005412053,0.00030212768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007387738,0.00007369807,0.00074199855,0.000072435345,0.000006538987,0.00030126437,0.00013456414,0.00003807897,0.99709713,0.000025309326,0.000017194205,0.00075309054],"study_design_scores_gemma":[0.000100457815,0.0036643164,0.0319079,0.0000352394,0.000057236295,0.0009837176,0.00068354385,0.00080711546,0.9603267,0.00016243257,0.0012446532,0.000026585512],"about_ca_topic_score_codex":0.0002452149,"about_ca_topic_score_gemma":0.00026552583,"teacher_disagreement_score":0.00128059,"about_ca_system_score_codex":0.00010615126,"about_ca_system_score_gemma":0.00014028948,"threshold_uncertainty_score":0.0042839646},"labels":[],"label_agreement":null},{"id":"W2056312952","doi":"10.1002/(sici)1097-0185(20000501)259:1<25::aid-ar3>3.0.co;2-y","title":"Histology and ultrastructure of the chorioallantoic membrane of the mallard duck (Anas platyrhynchos)","year":2000,"lang":"en","type":"article","venue":"The Anatomical Record","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Chorioallantoic membrane; Mesoderm; Biology; Basement membrane; Epithelium; Mesenchyme; Anatomy; Myoepithelial cell; Ultrastructure; Cell biology; Pathology; Embryo; Embryonic stem cell; Immunology; Medicine; Immunohistochemistry","score_opus":0.003713240258679874,"score_gpt":0.18746591331772722,"score_spread":0.18375267305904736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056312952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99240327,0.0019728811,0.001042432,0.000049627793,0.000018202212,0.00003657489,0.00073096884,0.000048166963,0.0036979478],"genre_scores_gemma":[0.98159343,0.0014788513,0.0052093635,0.00007565254,0.000009324562,0.00006203987,0.0007324455,0.000031360265,0.010807539],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999167,0.000004558171,0.000009102897,0.000035586912,0.00002046826,0.000013649151],"domain_scores_gemma":[0.99985576,0.000012591733,0.000046128185,0.0000104166775,0.000028411381,0.00004676826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009540172,0.00028120494,0.00014740281,0.0007085324,0.0004050153,0.0002849414,0.00012166469,0.00028609345,0.000976016],"category_scores_gemma":[0.00009913354,0.0002907041,0.0002085794,0.00019631363,0.00040166132,0.0002934232,0.00021649699,0.00037355517,0.00026440644],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011364577,0.000010647556,0.006948448,0.000083411076,0.000015755784,0.000586805,0.00023761761,0.000077066084,0.98889834,0.0002161345,0.0000673203,0.0027448104],"study_design_scores_gemma":[0.00002736926,0.0005870682,0.800965,0.00006424276,0.00009443236,0.0048499363,0.0010251469,0.00090049277,0.1824611,0.00019236332,0.008795461,0.00003744821],"about_ca_topic_score_codex":0.016019689,"about_ca_topic_score_gemma":0.03393032,"teacher_disagreement_score":0.016019689,"about_ca_system_score_codex":0.00077877805,"about_ca_system_score_gemma":0.00039097824,"threshold_uncertainty_score":0.0318529},"labels":[],"label_agreement":null},{"id":"W2056317997","doi":"10.1016/j.ymeth.2009.03.005","title":"Immunomodulatory consequences of ODN CpG-polycation complexes","year":2009,"lang":"en","type":"review","venue":"Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Centre National de la Recherche Scientifique; Styrelsen för Internationellt Utvecklingssamarbete","keywords":"CpG Oligodeoxynucleotide; Chemistry; CpG site; Biochemistry; DNA methylation; Gene","score_opus":0.08671242544486023,"score_gpt":0.4278429825370576,"score_spread":0.34113055709219736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056317997","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00061148824,0.9959437,0.00074968557,0.00021017432,0.00049254164,0.00001177548,0.000021405072,0.000014941353,0.0019442843],"genre_scores_gemma":[0.002882407,0.9912908,0.0009945655,0.00034873968,0.0003333564,0.000024935105,0.00006620703,0.000004348778,0.004054683],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998604,0.000016462196,0.000016203821,0.000029167491,0.00006132727,0.000016297692],"domain_scores_gemma":[0.9998635,0.000053759148,0.000026012245,0.000007651285,0.000035506004,0.000013511072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005932958,0.0009656248,0.00096715044,0.00083491876,0.00019040532,0.0006392584,0.00062939286,0.0008394299,0.0017617013],"category_scores_gemma":[0.00036186076,0.00027469892,0.00022090714,0.00078075315,0.00051902997,0.00083130406,0.0004651727,0.0011816544,0.0015123931],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018629523,0.00011401812,0.00010497102,0.0075172237,0.000034711305,0.0002003981,0.000027576732,0.0003366524,0.027846932,0.0031793674,0.014808829,0.945643],"study_design_scores_gemma":[0.000051982497,0.00019501516,0.00097488204,0.0012171356,0.000077376615,0.001262658,0.0000410729,0.00019618943,0.021291584,0.0017499495,0.97291315,0.000028897155],"about_ca_topic_score_codex":0.00059284526,"about_ca_topic_score_gemma":0.0009980839,"teacher_disagreement_score":0.0017617013,"about_ca_system_score_codex":0.0006449939,"about_ca_system_score_gemma":0.0006040101,"threshold_uncertainty_score":0.005893469},"labels":[],"label_agreement":null},{"id":"W2056666667","doi":"10.1042/bst0351479","title":"Nod1 and Nod2 in innate immunity and human inflammatory disorders","year":2007,"lang":"en","type":"review","venue":"Biochemical Society Transactions","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"NOD2; NOD1; Nod; Innate immune system; Peptidoglycan; Pyrin domain; Inflammasome; Biology; Inflammation; Pattern recognition receptor; Immunology; Cell biology; Signal transduction; Immune system; TLR4; Genetics; Bacteria","score_opus":0.02002222271725583,"score_gpt":0.29628176313730725,"score_spread":0.2762595404200514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2056666667","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001432124,0.99711204,0.00014987233,0.00043270143,0.0005239878,0.0000053731055,0.000007921995,0.0000083921,0.0016165117],"genre_scores_gemma":[0.0010606225,0.9946089,0.00033254162,0.0003681462,0.0008216187,0.000011085185,0.00003675794,0.0000019583968,0.0027585092],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998092,0.00004072659,0.000025297943,0.00003058314,0.00007318548,0.000021054795],"domain_scores_gemma":[0.9998055,0.00005634518,0.000030012356,0.0000074405257,0.000052547242,0.000048136986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005946678,0.0010245972,0.001240305,0.0013613526,0.00032985292,0.00073347567,0.000735833,0.0010950337,0.005065816],"category_scores_gemma":[0.00045690217,0.00020418427,0.00027442092,0.0016582593,0.00052155205,0.0012079674,0.00064850244,0.0012635539,0.005088525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107129614,0.000065279884,0.00027423745,0.0052172807,0.000045111534,0.0006259591,0.00007304212,0.00020500824,0.0022776534,0.0033653218,0.058950312,0.92879355],"study_design_scores_gemma":[0.000020676718,0.00006639469,0.0009593571,0.0012071976,0.00002930163,0.0025346116,0.00005054661,0.000039853287,0.00029866004,0.0023286836,0.99245524,0.000009502518],"about_ca_topic_score_codex":0.0005300766,"about_ca_topic_score_gemma":0.0008966709,"teacher_disagreement_score":0.005065816,"about_ca_system_score_codex":0.0005844034,"about_ca_system_score_gemma":0.00093587657,"threshold_uncertainty_score":0.016946912},"labels":[],"label_agreement":null},{"id":"W2057027223","doi":"10.1016/j.dci.2008.02.007","title":"Oligodeoxynucleotides containing CpG motifs (CpG-ODN) predominantly induce Th1-type immune response in neonatal chicks","year":2008,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"CpG Oligodeoxynucleotide; Biology; CpG site; Spleen; Immune system; Chemokine; Immunology; Cytokine; Molecular biology; Messenger RNA; Gene expression; Gene; DNA methylation","score_opus":0.03372784843036992,"score_gpt":0.2680291346579824,"score_spread":0.23430128622761248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057027223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99462056,0.0014852505,0.0013758034,0.000054105352,0.000076743825,0.000023998324,0.0004494295,0.00003549341,0.0018786216],"genre_scores_gemma":[0.98918086,0.0013508208,0.0019815306,0.00011117669,0.000022912522,0.000045308727,0.000577356,0.000030086705,0.0066999043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985707,0.000016977305,0.000016684859,0.000045047313,0.000024577786,0.000039595652],"domain_scores_gemma":[0.99966955,0.00008628215,0.000057110763,0.000019387166,0.00005813058,0.0001095811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014802099,0.00029975976,0.00029897914,0.000244952,0.000131852,0.00019801514,0.00015349666,0.0002374267,0.0013283317],"category_scores_gemma":[0.00021980683,0.00023136634,0.00014689278,0.000081254904,0.0002541169,0.00017230076,0.00012908796,0.00059217017,0.00042740098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024154311,0.000007844648,0.00026258218,0.00004632328,0.0000018793625,0.000026725767,0.0000141919445,0.000019594596,0.99874014,0.000025522828,0.000018313985,0.0005952966],"study_design_scores_gemma":[0.000023388562,0.00055583287,0.0115231555,0.0000153538,0.000020824906,0.00013457828,0.000085140935,0.0001621331,0.98623484,0.00002860646,0.0012094282,0.0000066314683],"about_ca_topic_score_codex":0.0018010066,"about_ca_topic_score_gemma":0.003658148,"teacher_disagreement_score":0.0018010066,"about_ca_system_score_codex":0.00036257142,"about_ca_system_score_gemma":0.00035064996,"threshold_uncertainty_score":0.0044436455},"labels":[],"label_agreement":null},{"id":"W2057194965","doi":"10.1016/j.vetimm.2012.07.008","title":"Characterization of responses elicited by Toll-like receptor agonists in cells of the bursa of Fabricius in chickens","year":2012,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; CD80; Immune system; CpG Oligodeoxynucleotide; Major histocompatibility complex; Receptor; Toll-like receptor; Bursa of Fabricius; Immunology; Lipopolysaccharide; Cell biology; TLR4; MHC class II; Molecular biology; Innate immune system; Gene; Gene expression; CD40; Genetics; Cytotoxic T cell; DNA methylation","score_opus":0.009888733847975737,"score_gpt":0.22756274561640413,"score_spread":0.2176740117684284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057194965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99924207,0.00024163823,0.00008703665,0.000015477912,0.000004128283,0.000005939905,0.000085398875,0.0000017835508,0.00031643952],"genre_scores_gemma":[0.99855596,0.00025500645,0.00016925238,0.000033165463,0.000007885162,0.000017396007,0.00026923954,0.0000019184095,0.0006902281],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999006,0.000017574615,0.000011271032,0.000023492641,0.000011964016,0.00003504328],"domain_scores_gemma":[0.999895,0.000028230506,0.000019590128,0.00001407751,0.00001937913,0.00002377462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013383273,0.00022249865,0.0002065408,0.00028510203,0.00023167803,0.00027014798,0.0001253484,0.000294409,0.00072062167],"category_scores_gemma":[0.00012673365,0.0001237371,0.00026045373,0.00014001927,0.0002694026,0.00020722846,0.00018206151,0.00032363762,0.00025534045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004079741,0.000019382844,0.0036502667,0.000032183383,0.0000034716672,0.00013225434,0.00011018326,0.000022864178,0.9951487,0.000027917895,0.000008814741,0.000435989],"study_design_scores_gemma":[0.00009157145,0.0030044643,0.49537283,0.000039240687,0.00009922087,0.0020219823,0.0036371534,0.0007371609,0.49137062,0.0001551613,0.0034456393,0.000025043508],"about_ca_topic_score_codex":0.0009358279,"about_ca_topic_score_gemma":0.0008587762,"teacher_disagreement_score":0.0009358279,"about_ca_system_score_codex":0.0001686534,"about_ca_system_score_gemma":0.00012288356,"threshold_uncertainty_score":0.0024107099},"labels":[],"label_agreement":null},{"id":"W2057224156","doi":"10.1186/cc9295","title":"Inhibition of monocyte chemoattractant protein-1 prevents diaphragmatic inflammation and maintains contractile function during endotoxemia","year":2010,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Christie (Canada); McGill University","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University","keywords":"Proinflammatory cytokine; Medicine; Chemokine; Inflammation; Immunology; Monocyte; Pathogenesis; Sepsis; Diaphragmatic breathing; Pathology","score_opus":0.006369805759582527,"score_gpt":0.23861842453610746,"score_spread":0.23224861877652495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057224156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99575645,0.002422759,0.0010278977,0.00010366053,0.00005528366,0.000029794872,0.00013478223,0.0000622129,0.00040708086],"genre_scores_gemma":[0.99460214,0.0021316085,0.0011852438,0.00009802434,0.000029346535,0.00007527121,0.00036740364,0.000009772952,0.001501104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990404,0.000014879573,0.000009554328,0.000012480794,0.00002064166,0.000038457703],"domain_scores_gemma":[0.9998723,0.0000131615025,0.000042660842,0.00001204195,0.000012822234,0.00004691131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018307954,0.00043049228,0.0003819739,0.0001641086,0.00009684537,0.00016564172,0.00026176695,0.00022736116,0.0010059706],"category_scores_gemma":[0.00013915756,0.00010880858,0.00019984838,0.000084839514,0.00023456528,0.00014572855,0.00016449038,0.00068630354,0.0002338538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012155194,0.00027881472,0.00034316257,0.00014173085,0.000011754714,0.00005263753,0.00001562404,0.0000772287,0.99474597,0.000043131047,0.00009722522,0.0029771917],"study_design_scores_gemma":[0.00035907663,0.011183204,0.02170092,0.000054326763,0.000059074882,0.00043124548,0.000053455795,0.0012370044,0.96232384,0.000061346196,0.0025246888,0.000011850015],"about_ca_topic_score_codex":0.00023385539,"about_ca_topic_score_gemma":0.0004024292,"teacher_disagreement_score":0.0010059706,"about_ca_system_score_codex":0.00013302482,"about_ca_system_score_gemma":0.0002353103,"threshold_uncertainty_score":0.0033653378},"labels":[],"label_agreement":null},{"id":"W2057372272","doi":"10.1074/jbc.m111.333146","title":"Post-transcriptional Inhibition of Luciferase Reporter Assays by the Nod-like Receptor Proteins NLRX1 and NLRC3","year":2012,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Luciferase; Biology; Interferon; Signal transduction; Reporter gene; Molecular biology; Cell biology; HEK 293 cells; Receptor; Gene; Biochemistry; Gene expression; Transfection; Genetics","score_opus":0.013277149135252447,"score_gpt":0.22269007634882682,"score_spread":0.20941292721357438,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057372272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83033633,0.0055255294,0.15302154,0.00044609196,0.00036265692,0.00050835934,0.0043976107,0.0014821448,0.003919695],"genre_scores_gemma":[0.88044244,0.003339267,0.093910284,0.00022121718,0.000080988095,0.0009540605,0.009893053,0.00046075508,0.010697925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99732095,0.0007352026,0.00035610047,0.00047447605,0.00079109706,0.00032217527],"domain_scores_gemma":[0.9990664,0.0003401553,0.00019106531,0.00019839304,0.00013489767,0.000069099886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018613054,0.0011083779,0.0011868101,0.00056618697,0.00025807752,0.0009335152,0.00062769157,0.00055563083,0.002028414],"category_scores_gemma":[0.00076187524,0.00037713748,0.0012358904,0.0007333834,0.00081203104,0.00046643039,0.0005809878,0.002156841,0.0014971957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010244969,0.000050611576,0.00010331931,0.00010212145,0.000010932459,0.000017790713,0.00003584711,0.00011611363,0.9984415,0.00013066853,0.000050385563,0.00083810324],"study_design_scores_gemma":[0.000007078759,0.0000861623,0.00034612895,0.000004050628,0.0000060208627,0.000040845578,0.00001060561,0.00075866404,0.9977794,0.000026020336,0.0009299824,0.000004858363],"about_ca_topic_score_codex":0.00040336596,"about_ca_topic_score_gemma":0.0004925374,"teacher_disagreement_score":0.002028414,"about_ca_system_score_codex":0.0006790128,"about_ca_system_score_gemma":0.00060672476,"threshold_uncertainty_score":0.0098436475},"labels":[],"label_agreement":null},{"id":"W2057383507","doi":"10.1016/j.addr.2008.12.004","title":"Approaches to enhancing immune responses stimulated by CpG oligodeoxynucleotides","year":2009,"lang":"en","type":"review","venue":"Advanced Drug Delivery Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"CpG Oligodeoxynucleotide; TLR9; Immune system; CpG site; Immunology; Toll-Like Receptor 9; Biology; Innate immune system; Downregulation and upregulation; Immunotherapy; Gene expression; Gene; Genetics","score_opus":0.08164691727319298,"score_gpt":0.3035510921415479,"score_spread":0.22190417486835493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057383507","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0019311991,0.9887038,0.004425844,0.00023252126,0.0007319949,0.000045308774,0.000025497542,0.000055132125,0.0038487106],"genre_scores_gemma":[0.006770698,0.98356646,0.0036243836,0.00035063364,0.00030444525,0.000066807304,0.00008276947,0.000007823235,0.005226003],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999013,0.000010714545,0.000008082289,0.000018322537,0.000043249187,0.000018322991],"domain_scores_gemma":[0.9999217,0.000030068819,0.000013813457,0.0000038167013,0.000020170351,0.000010400697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003496052,0.001191091,0.0010751729,0.0008896349,0.00018676066,0.0004387209,0.00065322197,0.0007479877,0.0018899027],"category_scores_gemma":[0.0001979083,0.00026877303,0.00038019213,0.00066016614,0.00037562277,0.00056858483,0.0004321589,0.001631687,0.0015483019],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018407343,0.00024874514,0.00010013369,0.0075103077,0.0000538601,0.00030611834,0.00004398303,0.0006653811,0.12959054,0.004123901,0.008639242,0.84853375],"study_design_scores_gemma":[0.00013081491,0.0008043509,0.00094419613,0.0012815823,0.00018359769,0.00209564,0.000050531322,0.00061399216,0.11210734,0.0021494725,0.87958264,0.000055809618],"about_ca_topic_score_codex":0.00055790826,"about_ca_topic_score_gemma":0.0011267805,"teacher_disagreement_score":0.0018899027,"about_ca_system_score_codex":0.0004669598,"about_ca_system_score_gemma":0.0004996939,"threshold_uncertainty_score":0.006322384},"labels":[],"label_agreement":null},{"id":"W2057459453","doi":"10.1128/iai.70.12.6541-6548.2002","title":"Induction of Keratinocyte Growth Factor 1 Expression by Lipopolysaccharide Is Regulated by CD-14 and Toll-Like Receptors 2 and 4","year":2002,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Biology; Keratinocyte growth factor; Keratinocyte; CD14; Porphyromonas gingivalis; Lipopolysaccharide; Receptor; Signal transduction; Cell biology; Toll-like receptor; Growth factor; Molecular biology; Immunology; Innate immune system; Cell culture; Biochemistry","score_opus":0.012161134807354966,"score_gpt":0.21840959840374063,"score_spread":0.20624846359638566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057459453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937921,0.0030345197,0.0017976859,0.0000544431,0.0000369127,0.000040557148,0.00017437035,0.000039999486,0.0010293783],"genre_scores_gemma":[0.9927471,0.0015423461,0.0030375854,0.000051166113,0.000012073469,0.00007426409,0.00036195654,0.000009218789,0.0021642959],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997304,0.000047191857,0.000024115381,0.00004445076,0.00004916986,0.00010468164],"domain_scores_gemma":[0.9998185,0.000021244243,0.000067838504,0.000017179356,0.00003782569,0.00003755789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013974757,0.00050175935,0.00023953813,0.00048171563,0.00020861122,0.00035291622,0.000095708696,0.00025316025,0.0011962411],"category_scores_gemma":[0.0001808559,0.0002102821,0.00045722048,0.00019571742,0.00022335758,0.00025229255,0.00038007981,0.00041249953,0.00033149158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013456767,0.000017721688,0.00044503552,0.000034730456,0.000002804243,0.000044889286,0.000010784398,0.000016025459,0.99848795,0.000027086568,0.000012508234,0.00076565804],"study_design_scores_gemma":[0.000038183523,0.0006487835,0.049652584,0.00002821815,0.000028521277,0.00044817664,0.000156863,0.0008307577,0.945688,0.00013889871,0.0023251488,0.00001584656],"about_ca_topic_score_codex":0.00033803517,"about_ca_topic_score_gemma":0.000567094,"teacher_disagreement_score":0.0011962411,"about_ca_system_score_codex":0.0003289347,"about_ca_system_score_gemma":0.0002131463,"threshold_uncertainty_score":0.0040017962},"labels":[],"label_agreement":null},{"id":"W2057623576","doi":"10.1186/cc14012","title":"Impact of KDO in biological activity of Re-LPS","year":2014,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Children's Health Foundation; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina; Financiadora de Estudos e Projetos; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Japan Society for the Promotion of Science; Russian Foundation for Basic Research; London Health Sciences Centre","keywords":"Medicine","score_opus":0.026510302716526556,"score_gpt":0.33061715935130787,"score_spread":0.3041068566347813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2057623576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99549896,0.0024937529,0.0008760486,0.00005794915,0.000042982214,0.000020941807,0.0001974813,0.000015964262,0.0007958865],"genre_scores_gemma":[0.9966851,0.0008220322,0.00064458424,0.000058230664,0.00001646973,0.0000122728325,0.0003035165,0.00001308012,0.0014446232],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998404,0.000042192605,0.000010818859,0.00003148754,0.000032989657,0.000041996584],"domain_scores_gemma":[0.99980325,0.000047092697,0.00004700184,0.000023703215,0.000030478664,0.000048504196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001486327,0.0003625294,0.00022722398,0.00012091696,0.00011034896,0.00036342134,0.0001580718,0.000260608,0.0019473826],"category_scores_gemma":[0.00027604026,0.00006822005,0.0001787714,0.00009286656,0.000252545,0.0001967994,0.00022413775,0.00031827495,0.00033484757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00104927,0.00007691774,0.00017871227,0.0000611666,0.0000051898714,0.00004053675,0.000015566666,0.000048593698,0.996887,0.00006395811,0.000019363702,0.0015536472],"study_design_scores_gemma":[0.000023896604,0.0010389135,0.0026473743,0.000010824126,0.000017476343,0.000088280234,0.00003239114,0.00019972902,0.9942147,0.00005453793,0.0016666093,0.0000053047306],"about_ca_topic_score_codex":0.00026467204,"about_ca_topic_score_gemma":0.00020273299,"teacher_disagreement_score":0.0019473826,"about_ca_system_score_codex":0.00015693088,"about_ca_system_score_gemma":0.0001470963,"threshold_uncertainty_score":0.006514609},"labels":[],"label_agreement":null},{"id":"W2058442785","doi":"10.1371/journal.pone.0038677","title":"Receptor-Independent Interaction of Bacterial Lipopolysaccharide with Lipid and Lymphocyte Membranes; the Role of Cholesterol","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Medical Research Council","keywords":"Membrane; Lipopolysaccharide; Bacterial outer membrane; POPC; Lipid raft; Biology; Cell membrane; Sphingomyelin; Chemistry; Cholesterol; Biochemistry; Lipid bilayer; Biophysics; Microbiology; Escherichia coli; Immunology","score_opus":0.01400882113555608,"score_gpt":0.19933375591738717,"score_spread":0.1853249347818311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058442785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939143,0.0021807642,0.0025056177,0.000090097856,0.000014348873,0.000015585392,0.00009910556,0.000013279286,0.0011668701],"genre_scores_gemma":[0.99640876,0.0007551099,0.0014792951,0.00004336595,0.000006477484,0.000017505627,0.00009565631,0.00000670945,0.00118713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974746,0.00007212951,0.0000089467785,0.000044996137,0.00006238652,0.00006416751],"domain_scores_gemma":[0.9998703,0.00003156804,0.00003263762,0.000017053932,0.000026446385,0.000021898806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001819574,0.00024839083,0.00023671742,0.0001281913,0.00017433045,0.00036026808,0.00034802945,0.0003780595,0.00087607064],"category_scores_gemma":[0.0002518167,0.00010478112,0.00020597992,0.00011650689,0.00023996973,0.00034454462,0.00039798024,0.00029286227,0.0004214134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001314463,0.000017159276,0.0003074785,0.000072899085,0.0000055713012,0.00005323329,0.000022429616,0.000037653208,0.9983072,0.0001278976,0.000023221064,0.0008936771],"study_design_scores_gemma":[0.000013777213,0.00010091575,0.0041828062,0.000011599695,0.000010584663,0.0002680342,0.00009523109,0.0013929043,0.9927602,0.00008133329,0.0010733808,0.000009407185],"about_ca_topic_score_codex":0.0006236638,"about_ca_topic_score_gemma":0.00060972816,"teacher_disagreement_score":0.00087607064,"about_ca_system_score_codex":0.0002631475,"about_ca_system_score_gemma":0.00015932764,"threshold_uncertainty_score":0.0029307604},"labels":[],"label_agreement":null},{"id":"W2058909419","doi":"10.1016/j.molimm.2007.03.019","title":"Distinct role of MAPKAPK-2 in the regulation of TNF gene expression by Toll-like receptor 7 and 9 ligands","year":2007,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University; Montreal General Hospital","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"p38 mitogen-activated protein kinases; Cell biology; MAPK/ERK pathway; Regulation of gene expression; Toll-Like Receptor 9; Gene expression; Toll-like receptor; Biology; Reporter gene; Untranslated region; CpG site; TLR9; Messenger RNA; Signal transduction; Gene; Receptor; Molecular biology; Innate immune system; Genetics; DNA methylation","score_opus":0.0031893817307033392,"score_gpt":0.20300276347399185,"score_spread":0.1998133817432885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058909419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98734725,0.005378741,0.002993078,0.00030136041,0.00010916581,0.000031081945,0.00042099776,0.000053966523,0.0033645246],"genre_scores_gemma":[0.99294406,0.0015534825,0.0016368745,0.00009636781,0.000049470545,0.000057580848,0.000495339,0.000020550437,0.0031463183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997502,0.000053976408,0.000019887986,0.00002885294,0.000049636797,0.00009747187],"domain_scores_gemma":[0.9998179,0.000028563854,0.000037343783,0.000023102437,0.000027667142,0.000065506145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029753207,0.00051581755,0.00036778074,0.00039034797,0.0003189806,0.0006382135,0.00033619234,0.0003524576,0.0015163579],"category_scores_gemma":[0.00024398703,0.00033612826,0.0004996903,0.00013641173,0.00029968118,0.000618378,0.000544281,0.0008735275,0.0005920895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021052542,0.0000725096,0.0006774865,0.00008289357,0.000014358716,0.0002796005,0.00004528275,0.00015116738,0.99320084,0.0007974559,0.00010705213,0.0024661317],"study_design_scores_gemma":[0.0004143734,0.00093829056,0.096450016,0.00006592322,0.000097104,0.0025335634,0.0003510316,0.0055901133,0.885071,0.0021226574,0.0063095377,0.00005651777],"about_ca_topic_score_codex":0.00022765271,"about_ca_topic_score_gemma":0.00033503215,"teacher_disagreement_score":0.0015163579,"about_ca_system_score_codex":0.00034281073,"about_ca_system_score_gemma":0.0003233662,"threshold_uncertainty_score":0.0050727725},"labels":[],"label_agreement":null},{"id":"W2059124184","doi":"10.1164/rccm.200609-1250oc","title":"Gene Expression Profiling Identifies C/EBPδ as a Candidate Regulator of Endotoxin-induced Disseminated Intravascular Coagulation","year":2007,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Medicine; Regulator; Disseminated intravascular coagulation; Gene expression profiling; Coagulation; Gene expression; Profiling (computer programming); Computational biology; Bioinformatics; Intensive care medicine; Gene; Pathology; Internal medicine; Genetics; Biology","score_opus":0.010461595833128213,"score_gpt":0.2976968533992087,"score_spread":0.2872352575660805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059124184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927931,0.0017760321,0.0034532505,0.00005930917,0.000012494755,0.000033486525,0.001386026,0.000041596904,0.00044478572],"genre_scores_gemma":[0.9881421,0.0015271218,0.0061702,0.0001273629,0.000017459148,0.00010329894,0.0025796122,0.000016808754,0.0013160075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998925,0.00001130347,0.000007824311,0.000037483805,0.000025254896,0.00002554492],"domain_scores_gemma":[0.99987674,0.000027815819,0.000040442646,0.000010084411,0.000021845382,0.000023169772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015086345,0.0002677395,0.00033636816,0.0005321854,0.00012825205,0.00021347009,0.00013872341,0.0002620956,0.0005731794],"category_scores_gemma":[0.00018938685,0.00008690212,0.00018596333,0.00052293786,0.00018981115,0.00012403585,0.00021044197,0.00027537704,0.00019884517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002302276,0.000014695054,0.0027613747,0.000046010224,0.0000069556063,0.000082541716,0.000019954,0.000067572495,0.99490875,0.00002274847,0.00003088721,0.0018082425],"study_design_scores_gemma":[0.00006270654,0.00079396396,0.3717887,0.00004823722,0.0001344672,0.0016628285,0.00029161168,0.0041007153,0.61774486,0.00037526383,0.0029745465,0.000022060633],"about_ca_topic_score_codex":0.00024468076,"about_ca_topic_score_gemma":0.0002818064,"teacher_disagreement_score":0.0005731794,"about_ca_system_score_codex":0.0001581971,"about_ca_system_score_gemma":0.00014320346,"threshold_uncertainty_score":0.0019174814},"labels":[],"label_agreement":null},{"id":"W2059241056","doi":"10.1016/j.healun.2003.11.272","title":"Alterations in gene expression of toll-like receptors in human lung transplantation","year":2004,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"","keywords":"Receptor; Innate immune system; Immunology; Biology; Acquired immune system; Toll; Pattern recognition receptor; Immune system; Immunity; Transplantation; Cell biology; Cytokine; Toll-like receptor; Endogeny; Gene; Medicine; Genetics","score_opus":0.007964720266214542,"score_gpt":0.25303286399533004,"score_spread":0.2450681437291155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059241056","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979528,0.00092758576,0.0002997825,0.000027212864,0.000021281343,0.000015366079,0.00012826253,0.000012441799,0.00061512983],"genre_scores_gemma":[0.99884015,0.0003549259,0.00006210366,0.000021388729,0.0000124510225,0.000014493471,0.00015457299,0.000003950711,0.0005359376],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983215,0.00004132524,0.000010918638,0.000028826757,0.000031015144,0.000055720033],"domain_scores_gemma":[0.9997727,0.00007984873,0.00003965943,0.000028251883,0.00002520325,0.000054321656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022989458,0.00018807124,0.0004325624,0.0007541541,0.00029635578,0.00044311414,0.00014835461,0.0003796999,0.0023796617],"category_scores_gemma":[0.0005140496,0.00020186981,0.00028775114,0.00057458406,0.00059656583,0.00021498672,0.00020779372,0.00046527357,0.00042249862],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01074758,0.00046795793,0.03128586,0.00012243637,0.000052640546,0.0035127685,0.00027254305,0.00021673233,0.9439215,0.00027549392,0.00020754478,0.008916929],"study_design_scores_gemma":[0.0003033507,0.004944917,0.6348392,0.000024651925,0.00022886823,0.011250914,0.00096736103,0.001227178,0.34260714,0.00060195243,0.0029641953,0.0000404262],"about_ca_topic_score_codex":0.0005038833,"about_ca_topic_score_gemma":0.00032676553,"teacher_disagreement_score":0.0023796617,"about_ca_system_score_codex":0.00022039696,"about_ca_system_score_gemma":0.00023111058,"threshold_uncertainty_score":0.007960737},"labels":[],"label_agreement":null},{"id":"W2059391844","doi":"10.1074/jbc.m312431200","title":"Dual Receptors and Distinct Pathways Mediate Interleukin-1 Receptor-associated Kinase Degradation in Response to Lipopolysaccharide","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre; Vancouver Coastal Health Research Institute; University of British Columbia","funders":"","keywords":"Lipopolysaccharide; TLR4; Phosphatidylinositol; Cell biology; Signal transduction; CD14; Receptor; Kinase; Biology; Agonist; Immunology; Biochemistry","score_opus":0.016245998578228203,"score_gpt":0.23309841435259954,"score_spread":0.21685241577437134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059391844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97916484,0.00855173,0.0105497865,0.0002229256,0.00006869038,0.000034897344,0.00015146245,0.00008649408,0.0011692402],"genre_scores_gemma":[0.99044764,0.0018483077,0.0056422963,0.000090843496,0.000044611166,0.000050308976,0.0002016674,0.0000134882275,0.0016608195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992674,0.00011863061,0.00006234223,0.00013501865,0.00016243654,0.00025413165],"domain_scores_gemma":[0.99963546,0.000035573412,0.00013656047,0.00004147261,0.000063497784,0.000087392444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052124215,0.00059428846,0.00045691288,0.0004521613,0.00025604575,0.0008962708,0.00032872587,0.0006749369,0.0010421362],"category_scores_gemma":[0.0005046788,0.00033088503,0.00050129637,0.00018751847,0.00048273214,0.0009716247,0.00078540464,0.0011411041,0.0005623413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056369696,0.000032937227,0.00063870364,0.00007087772,0.0000101313835,0.00009479604,0.000025799007,0.000052763855,0.9951591,0.00034396283,0.00004848297,0.0029587862],"study_design_scores_gemma":[0.000107560096,0.0006839822,0.027861139,0.000034987523,0.00007443453,0.0025985506,0.00020264418,0.0037537883,0.9587035,0.001444684,0.00449202,0.00004273026],"about_ca_topic_score_codex":0.00011503557,"about_ca_topic_score_gemma":0.00016628263,"teacher_disagreement_score":0.0010421362,"about_ca_system_score_codex":0.00050587085,"about_ca_system_score_gemma":0.00027011914,"threshold_uncertainty_score":0.0036703348},"labels":[],"label_agreement":null},{"id":"W2059717570","doi":"10.1007/s10875-014-9996-4","title":"Fatal Pneumococcal Meningitis in a 7-Year-Old Girl with Interleukin-1 Receptor Activated Kinase Deficiency (IRAK-4) Despite Prophylactic Antibiotic and IgG Responses to Streptococcus Pneumoniae Vaccines","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Medicine; Streptococcus pneumoniae; Meningitis; Immunology; Vaccination; Pneumococcal polysaccharide vaccine; Pneumococcal vaccine; Neutropenia; Antibiotics; Internal medicine; Pediatrics; Chemotherapy; Microbiology","score_opus":0.017355615700544433,"score_gpt":0.2993316985993356,"score_spread":0.28197608289879117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059717570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853624,0.0017855908,0.00083427737,0.0047817575,0.0004908849,0.00010531304,0.00030990323,0.000116236544,0.006213592],"genre_scores_gemma":[0.99559265,0.0010816065,0.0003835162,0.0011652234,0.00045516234,0.000019967907,0.0001500992,0.000029878342,0.0011219686],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9992192,0.000082433406,0.00008209887,0.00019221217,0.0001058689,0.0003182184],"domain_scores_gemma":[0.99803907,0.0006093627,0.00030288368,0.00010586162,0.00014830769,0.0007944628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037569136,0.0022680925,0.0018616439,0.0013610176,0.0037234523,0.0014032237,0.0013700782,0.0058320984,0.0015838742],"category_scores_gemma":[0.0034978478,0.0017665168,0.0014727693,0.0008627003,0.0021657208,0.0018180046,0.0014914548,0.004846288,0.000851648],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108071144,0.0000603368,0.008992486,0.000018734389,0.0000065315303,0.989542,0.000111765185,0.00004652357,0.00050112617,0.00007621265,0.00017065006,0.0003655372],"study_design_scores_gemma":[0.00006384482,0.0005595946,0.02527072,0.00005416703,0.00004994138,0.97160304,0.00047186812,0.00046590393,0.0006521776,0.00019206372,0.00059328525,0.0000234255],"about_ca_topic_score_codex":0.0049251253,"about_ca_topic_score_gemma":0.0045880172,"teacher_disagreement_score":0.0058320984,"about_ca_system_score_codex":0.0019551755,"about_ca_system_score_gemma":0.0015927189,"threshold_uncertainty_score":0.014185905},"labels":[],"label_agreement":null},{"id":"W2059740732","doi":"10.1371/journal.pone.0005644","title":"HIV-1 RNA Dysregulates the Natural TLR Response to Subclinical Endotoxemia in Kenyan Female Sex-Workers","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; McMaster University; Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network; University of Manitoba; Bill and Melinda Gates Foundation","keywords":"TLR4; Peripheral blood mononuclear cell; Immunology; Proinflammatory cytokine; Immune system; Ex vivo; Subclinical infection; Viral load; Medicine; Biology; Cytokine; Pathogenesis; In vivo; Inflammation; Internal medicine; In vitro; Human immunodeficiency virus (HIV)","score_opus":0.02183794332630182,"score_gpt":0.24850864754964735,"score_spread":0.22667070422334554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059740732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995484,0.00013165001,0.000034103527,0.000020724565,0.0000041298717,0.0000073290234,0.000041147694,0.0000021833011,0.00021020907],"genre_scores_gemma":[0.99888045,0.0001815262,0.000088653935,0.00004963232,0.000008566047,0.000022700286,0.00008385944,0.0000021830265,0.0006823807],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999411,0.000012617464,0.0000026850425,0.000012267239,0.000008760666,0.000022570544],"domain_scores_gemma":[0.99989545,0.000017090651,0.0000386514,0.000005991149,0.000017870498,0.000024899831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009624062,0.00019323749,0.0001210569,0.00016585064,0.0004274894,0.00033947278,0.0001230178,0.0002574459,0.0032316104],"category_scores_gemma":[0.0003205836,0.00016928269,0.00008134724,0.000083657025,0.0001870135,0.000092939736,0.00018295075,0.00021497402,0.0003854985],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002546766,0.0005714245,0.3668064,0.00026260433,0.000034224773,0.0017608686,0.0025348733,0.000050041064,0.6111371,0.00013978062,0.0007256984,0.013430235],"study_design_scores_gemma":[0.00003309697,0.001276216,0.98460335,0.000046740268,0.000025821904,0.001074733,0.0019915467,0.00015627946,0.0096241,0.000064727465,0.0010948887,0.000008515193],"about_ca_topic_score_codex":0.0011469809,"about_ca_topic_score_gemma":0.0017091801,"teacher_disagreement_score":0.0032316104,"about_ca_system_score_codex":0.00011146629,"about_ca_system_score_gemma":0.00013718475,"threshold_uncertainty_score":0.010810852},"labels":[],"label_agreement":null},{"id":"W2059812027","doi":"10.1074/jbc.m114.618496","title":"Scaffold Protein JLP Is Critical for CD40 Signaling in B Lymphocytes","year":2015,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Internalization; Cell biology; CD154; CD40; Biology; MAPK/ERK pathway; Signal transduction; Signal transducing adaptor protein; Scaffold protein; Receptor; Biochemistry; Cytotoxic T cell","score_opus":0.04280807154360395,"score_gpt":0.2867446657565537,"score_spread":0.24393659421294978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059812027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991154,0.0029014668,0.0038047712,0.00019028221,0.00005075128,0.000018231194,0.00045550958,0.00020999642,0.0012148567],"genre_scores_gemma":[0.9960288,0.00058695563,0.0012213227,0.000045768116,0.000016298625,0.000021960454,0.00062893366,0.00003352052,0.0014165672],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999813,0.000022460492,0.000019301353,0.000041990144,0.000053934105,0.00004920301],"domain_scores_gemma":[0.99977845,0.000016061986,0.000077815814,0.000015308617,0.000029321473,0.00008298696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114932605,0.00041684604,0.00020454807,0.00023014218,0.00045811918,0.0004600517,0.00023570078,0.00042804255,0.0019371094],"category_scores_gemma":[0.00018459508,0.00015939206,0.00029165662,0.00014322066,0.00027279108,0.00029994873,0.0005413675,0.0005773371,0.0010902871],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008364273,0.000009925949,0.00031975316,0.000045415218,0.000003339117,0.00023775637,0.000014161268,0.00003230381,0.9983525,0.00012447158,0.000059760117,0.00071697164],"study_design_scores_gemma":[0.000041300787,0.0001413234,0.020833641,0.000026636715,0.00003743797,0.0021000218,0.00010367778,0.0012328903,0.96702695,0.00026269845,0.008180798,0.0000125659135],"about_ca_topic_score_codex":0.00046114274,"about_ca_topic_score_gemma":0.00036472877,"teacher_disagreement_score":0.0019371094,"about_ca_system_score_codex":0.00050096074,"about_ca_system_score_gemma":0.00032259207,"threshold_uncertainty_score":0.006480336},"labels":[],"label_agreement":null},{"id":"W2059878343","doi":"10.1016/j.jim.2011.11.011","title":"Optimization of a whole blood intracellular cytokine assay for measuring innate cell responses to mycobacteria","year":2011,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Wellcome Trust; American Educational Research Association","keywords":"Innate immune system; Biology; CD14; Monocyte; CD11c; Cytokine; Immunology; Intracellular; Flow cytometry; Green fluorescent protein; Myeloid; TLR2; Cell biology; Immune system; Biochemistry","score_opus":0.05648657769317325,"score_gpt":0.30417238892553866,"score_spread":0.2476858112323654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059878343","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5566724,0.0016145781,0.4342889,0.00035957902,0.00032447965,0.002030502,0.0019755182,0.0013795975,0.0013544253],"genre_scores_gemma":[0.5372223,0.0009383383,0.45053035,0.00035144392,0.0001534588,0.0026117233,0.004510478,0.0003141164,0.0033678275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99644756,0.0010314116,0.00032140722,0.0005741489,0.001434562,0.00019083016],"domain_scores_gemma":[0.9983878,0.00071252504,0.00017872716,0.00023327008,0.00039758193,0.000089978756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024363943,0.0016161766,0.0011638004,0.0008222077,0.00038103375,0.0011226797,0.0011989584,0.0009919722,0.0009361526],"category_scores_gemma":[0.0024848352,0.0007164061,0.00073220744,0.00049072196,0.00062049035,0.00047602467,0.00064138946,0.0012345015,0.0011582125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015448399,0.00008862948,0.0006086863,0.00003529871,0.000010237695,0.000011531161,0.000016185546,0.00013948482,0.99599993,0.000033473993,0.000057246147,0.002844915],"study_design_scores_gemma":[0.00003141444,0.00073885365,0.0038299854,0.000010349173,0.00005828374,0.00017470577,0.000023597722,0.0031807234,0.9908407,0.000055953933,0.0010377084,0.000017769602],"about_ca_topic_score_codex":0.0006933348,"about_ca_topic_score_gemma":0.0018641895,"teacher_disagreement_score":0.0024363943,"about_ca_system_score_codex":0.00039877454,"about_ca_system_score_gemma":0.0007262013,"threshold_uncertainty_score":0.012885094},"labels":[],"label_agreement":null},{"id":"W2060075310","doi":"10.1165/rcmb.2008-0301oc","title":"Innate Immune Processes Are Sufficient for Driving Cigarette Smoke–Induced Inflammation in Mice","year":2009,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Neutrophilia; Immunology; Chemokine; Inflammation; Immune system; Bronchoalveolar lavage; Macrophage inflammatory protein; FOXP3; Macrophage; Eotaxin; Biology; Lung; Medicine; Internal medicine; In vitro","score_opus":0.008248540082494196,"score_gpt":0.24956536424849912,"score_spread":0.24131682416600492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060075310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922552,0.002305273,0.002516705,0.00029800128,0.0000733805,0.00013113415,0.0008761465,0.00021274741,0.0013315367],"genre_scores_gemma":[0.9849541,0.0021230872,0.0052689477,0.00036389503,0.000061745675,0.00038014734,0.0016377057,0.00011288138,0.005097504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920696,0.00012746113,0.000090990434,0.00016594461,0.0002034385,0.0002052074],"domain_scores_gemma":[0.9990783,0.00007382846,0.00033490898,0.00012807647,0.000055040633,0.00032986107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052870286,0.0010792551,0.0005953409,0.0011452504,0.00044926512,0.0007171814,0.00064031576,0.0012615632,0.002062878],"category_scores_gemma":[0.0002863169,0.00070315273,0.0007859969,0.00030326183,0.00078316365,0.00063204474,0.00046001616,0.0025270164,0.00084332307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008882493,0.00038602616,0.00074693444,0.00006349838,0.000013711969,0.00014706104,0.00003469077,0.00007840929,0.9958254,0.00020379061,0.000059186383,0.0015529691],"study_design_scores_gemma":[0.0005693007,0.006551287,0.03536992,0.00012327435,0.00014090275,0.0017602223,0.00022491813,0.0024727844,0.94517386,0.00048786466,0.007077566,0.000047982645],"about_ca_topic_score_codex":0.0008871851,"about_ca_topic_score_gemma":0.0018951973,"teacher_disagreement_score":0.002062878,"about_ca_system_score_codex":0.0006876237,"about_ca_system_score_gemma":0.00066117296,"threshold_uncertainty_score":0.006901026},"labels":[],"label_agreement":null},{"id":"W2060668169","doi":"10.1007/s00423-010-0658-6","title":"Endotoxin elimination in sepsis: physiology and therapeutic application","year":2010,"lang":"en","type":"review","venue":"Langenbeck s Archives of Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Sepsis; Detoxification (alternative medicine); Septic shock; Pathogenesis; Immunology; Medicine; Lipopolysaccharide; Inflammatory response; Inflammation; Pharmacology","score_opus":0.03193591182212212,"score_gpt":0.2842719885448726,"score_spread":0.2523360767227505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060668169","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000112357295,0.99894935,0.00016557703,0.0001862673,0.00023814365,0.0000024946864,0.00000973462,0.0000049737596,0.00033116905],"genre_scores_gemma":[0.0008757559,0.9978873,0.00026581608,0.00016896993,0.00040790334,0.0000067735796,0.000022554861,0.0000014373122,0.000363458],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977726,0.000033775334,0.000046052483,0.000043147513,0.00007642563,0.000023465002],"domain_scores_gemma":[0.9995536,0.00020747188,0.00006458379,0.000017147342,0.000107308035,0.000049839997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091625436,0.0013029837,0.001844609,0.0017269778,0.00025378374,0.001343433,0.00089584774,0.001654673,0.0022310035],"category_scores_gemma":[0.0009327777,0.00031870732,0.0004593125,0.0019349075,0.00089122186,0.0016356207,0.00081168837,0.002406984,0.0021930167],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003419103,0.00015999327,0.00020990585,0.00830041,0.000070024056,0.00025520762,0.00003640378,0.0003924998,0.0031216834,0.0023130958,0.018846322,0.9659525],"study_design_scores_gemma":[0.00015524623,0.00053895544,0.0019393747,0.0035757634,0.00023367647,0.003223822,0.00010950108,0.00027201933,0.001964103,0.0033696347,0.9845663,0.00005163657],"about_ca_topic_score_codex":0.00047051997,"about_ca_topic_score_gemma":0.00081689726,"teacher_disagreement_score":0.0022310035,"about_ca_system_score_codex":0.00047121075,"about_ca_system_score_gemma":0.0010591545,"threshold_uncertainty_score":0.007463455},"labels":[],"label_agreement":null},{"id":"W2060800255","doi":"10.1016/s0264-410x(00)00208-5","title":"Oral, intrarectal and intranasal immunizations using CpG and non-CpG oligodeoxynucleotides as adjuvants","year":2000,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":158,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"","keywords":"CpG Oligodeoxynucleotide; Adjuvant; Nasal administration; Toxoid; Immune system; Antigen; Immunology; Medicine; CpG site; Tetanus; Immunization; Antibody; Vaccination; Biology","score_opus":0.006817715667961458,"score_gpt":0.23370588873500805,"score_spread":0.2268881730670466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060800255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9877216,0.0028291973,0.005065549,0.00017854257,0.00038228984,0.0003602022,0.00039798967,0.00016725052,0.0028974144],"genre_scores_gemma":[0.97714305,0.0033386988,0.009738784,0.00022936738,0.000098097196,0.00046856608,0.0006855656,0.00004648576,0.008251435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996222,0.000054572978,0.00002438119,0.000081466496,0.00008806999,0.00012921866],"domain_scores_gemma":[0.9997969,0.00004846038,0.000032979922,0.000044629665,0.000029749164,0.00004714956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000601409,0.0007953433,0.00095170195,0.00041928486,0.00024107964,0.000328972,0.00039213613,0.0006945772,0.0014197052],"category_scores_gemma":[0.0003992755,0.0002745002,0.0004725897,0.0003662907,0.00065485545,0.00032486732,0.0002880487,0.0014377985,0.00047786708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028266073,0.0008792588,0.0005265942,0.0002557691,0.000024398663,0.00007717355,0.000057109544,0.00025290553,0.9819226,0.00030143117,0.00019911911,0.012676997],"study_design_scores_gemma":[0.0004094795,0.014978559,0.0032470035,0.000043832453,0.00017891478,0.000285419,0.00009301658,0.00090175273,0.9755756,0.00017638422,0.0040924638,0.000017589027],"about_ca_topic_score_codex":0.0017564294,"about_ca_topic_score_gemma":0.0028266527,"teacher_disagreement_score":0.0017564294,"about_ca_system_score_codex":0.00037381894,"about_ca_system_score_gemma":0.0010934231,"threshold_uncertainty_score":0.0047493577},"labels":[],"label_agreement":null},{"id":"W2060806856","doi":"10.1189/jlb.0703314","title":"Burn injury induces a change in T cell homeostasis affecting preferentially CD4+ T cells","year":2004,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"","keywords":"Biology; Homeostasis; Cell biology; Cd4 t cell; T cell; Immunology; Immune system","score_opus":0.02353002160503824,"score_gpt":0.27300615453831273,"score_spread":0.24947613293327447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2060806856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99646735,0.0016781053,0.00070835283,0.0000449089,0.000028496272,0.000024799534,0.00009755522,0.000035586352,0.0009149488],"genre_scores_gemma":[0.9937605,0.001429826,0.0013162819,0.00014393694,0.000043373697,0.000072617746,0.0002984104,0.00001756428,0.002917507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997843,0.000031962638,0.000017047163,0.000048739337,0.00004304728,0.000074988275],"domain_scores_gemma":[0.9998946,0.000012839209,0.000026698543,0.000013410284,0.000015112843,0.000037245285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011301863,0.00040458617,0.00032216733,0.00030968382,0.00018011179,0.00027681535,0.00012134201,0.00033586923,0.0022067712],"category_scores_gemma":[0.00012043826,0.00016608012,0.00025054484,0.00013749301,0.00018093648,0.0002470434,0.00016730557,0.0008945624,0.00043763363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003758792,0.00006993556,0.00056103204,0.000046794,0.0000040442815,0.000058671227,0.000020785556,0.000023142895,0.99696213,0.000017401033,0.000017581488,0.0018425864],"study_design_scores_gemma":[0.00009659123,0.005275388,0.04956397,0.000038061058,0.000074335876,0.0013793021,0.00019906179,0.0008139233,0.9396239,0.00016295131,0.0027597237,0.0000127754265],"about_ca_topic_score_codex":0.00014001901,"about_ca_topic_score_gemma":0.00020341456,"teacher_disagreement_score":0.0022067712,"about_ca_system_score_codex":0.00012572871,"about_ca_system_score_gemma":0.00011835663,"threshold_uncertainty_score":0.007382393},"labels":[],"label_agreement":null},{"id":"W2061000814","doi":"10.1100/2011/131539","title":"Regulation of Neutrophil Survival/Apoptosis by Mcl-1","year":2011,"lang":"en","type":"review","venue":"The Scientific World JOURNAL","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":83,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Apoptosis; Inflammation; Immunology; Granulocyte; Leukemia; Myeloid; Myeloid leukemia; Biology; Cancer research; Medicine; Genetics","score_opus":0.042276809517504746,"score_gpt":0.279229004592722,"score_spread":0.23695219507521725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061000814","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006377127,0.9965456,0.0004914861,0.0003186577,0.00019443835,0.0000075041735,0.000019722052,0.000023605511,0.0017613178],"genre_scores_gemma":[0.005553732,0.99109674,0.0006643353,0.0002174659,0.00024145521,0.000022568634,0.000052816053,0.0000037044301,0.002147243],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998702,0.000020459327,0.000014432902,0.000025374682,0.000051854022,0.000017729222],"domain_scores_gemma":[0.9998747,0.000031298747,0.000027790811,0.0000060517045,0.000039738705,0.000020461623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003553739,0.0006932466,0.00080898625,0.0009617991,0.0002518333,0.000792319,0.0007187144,0.000861455,0.0015671939],"category_scores_gemma":[0.0002748991,0.00018138316,0.00020440534,0.0007051616,0.0004486311,0.0008682867,0.0005257016,0.0011222969,0.0023036068],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012841514,0.00007390891,0.00019895245,0.0057979496,0.000037096208,0.00032801196,0.000065056396,0.0004932522,0.031435944,0.006808321,0.019546932,0.93508613],"study_design_scores_gemma":[0.00003720157,0.00018780692,0.0015086458,0.0008787106,0.00004294503,0.0019891737,0.00005639255,0.00026821173,0.0183792,0.0034881486,0.97313267,0.000030896324],"about_ca_topic_score_codex":0.0005220822,"about_ca_topic_score_gemma":0.00065312674,"teacher_disagreement_score":0.0015671939,"about_ca_system_score_codex":0.00080085633,"about_ca_system_score_gemma":0.0005261512,"threshold_uncertainty_score":0.005810678},"labels":[],"label_agreement":null},{"id":"W2061146935","doi":"10.1016/j.smim.2010.01.001","title":"Evolution of innate and adaptive immune recognition structures","year":2010,"lang":"en","type":"editorial","venue":"Seminars in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; University of Toronto","funders":"","keywords":"Immune system; Biology; Antigen; Immune receptor; T-cell receptor; Acquired immune system; Signal transduction; Innate immune system; Cell biology; Receptor; Immunology; T cell; Genetics","score_opus":0.005249873056109667,"score_gpt":0.2247370655227933,"score_spread":0.21948719246668363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061146935","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004487592,0.018353028,0.0004694279,0.021450654,0.9570838,0.000012820924,0.000048763195,0.00006153139,0.0020711932],"genre_scores_gemma":[0.006828442,0.020402437,0.0007275337,0.019393148,0.9275189,0.000030260613,0.00008507771,0.00006113412,0.024953179],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99908805,0.00015842298,0.00010894214,0.00015762696,0.00036630707,0.00012054817],"domain_scores_gemma":[0.9962231,0.0014703148,0.00021327777,0.00015773761,0.0013327993,0.0006027402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034415005,0.0022218113,0.0017756232,0.0013534448,0.0011798785,0.002814554,0.0025316556,0.005937325,0.0055308486],"category_scores_gemma":[0.0054854155,0.0007978023,0.001272138,0.00049310346,0.0018674353,0.002224646,0.0013275936,0.01179764,0.0026772642],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025241496,0.00003276018,0.00013824327,0.000693713,0.00008788317,0.00047735503,0.00005821078,0.00014179802,0.002076597,0.0024444389,0.9649724,0.02862427],"study_design_scores_gemma":[0.00010100038,0.000049886887,0.00087770366,0.00019832102,0.0001191271,0.000537263,0.000058071368,0.00023893786,0.0014986534,0.0021334821,0.99416333,0.000024201425],"about_ca_topic_score_codex":0.0006181193,"about_ca_topic_score_gemma":0.0019296868,"teacher_disagreement_score":0.005937325,"about_ca_system_score_codex":0.0012957433,"about_ca_system_score_gemma":0.0007849685,"threshold_uncertainty_score":0.018502474},"labels":[],"label_agreement":null},{"id":"W2061514779","doi":"10.1182/blood-2005-06-2202","title":"Platelet Toll-like receptor expression modulates lipopolysaccharide-induced thrombocytopenia and tumor necrosis factor-α production in vivo","year":2005,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":475,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; Canadian Blood Services","keywords":"Innate immune system; TLR4; TLR2; TLR9; Platelet; Biology; Lipopolysaccharide; Tumor necrosis factor alpha; Toll-like receptor; Immunology; In vivo; Receptor; Cytokine; Immune system; Gene expression; Biochemistry","score_opus":0.012299519627697666,"score_gpt":0.22901763306449824,"score_spread":0.21671811343680059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061514779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953217,0.0016167646,0.0017246993,0.00009874741,0.000034505418,0.000032663153,0.00017982049,0.000053707037,0.00093752216],"genre_scores_gemma":[0.9957694,0.001160446,0.0010545686,0.000069987116,0.000041292402,0.00007034203,0.00046542156,0.000016029464,0.0013524746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969983,0.00012676278,0.00002403965,0.000030629442,0.000046717018,0.000071973875],"domain_scores_gemma":[0.9997272,0.000071011156,0.00008950144,0.000037208978,0.000019807707,0.000055329714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031323635,0.00032711992,0.00027852762,0.00032956968,0.000118992364,0.00035374233,0.00014778026,0.00032325246,0.00094867335],"category_scores_gemma":[0.00031038641,0.00019951403,0.00017764467,0.00018843955,0.00025337734,0.00020751197,0.00013868044,0.00072786695,0.00042615648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009867497,0.00007971186,0.0001923055,0.000035201614,0.000006963617,0.000099780285,0.000016819948,0.00004827167,0.997276,0.00007585123,0.000051465995,0.0011307892],"study_design_scores_gemma":[0.00012876613,0.0020215772,0.0051247776,0.000010901099,0.00004687684,0.00041725763,0.000033595847,0.0012208396,0.9898573,0.000096596945,0.0010364862,0.000005107245],"about_ca_topic_score_codex":0.00013946614,"about_ca_topic_score_gemma":0.00014613962,"teacher_disagreement_score":0.00094867335,"about_ca_system_score_codex":0.00022418603,"about_ca_system_score_gemma":0.00011787019,"threshold_uncertainty_score":0.0031735897},"labels":[],"label_agreement":null},{"id":"W2061636798","doi":"10.1016/j.clim.2009.03.232","title":"T.98. Toll-like Receptor 7 Ligation Converts T Cell Autoreactivity into Overt Autoimmune Diabetes","year":2009,"lang":"en","type":"article","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"TLR7; Imiquimod; Cytokine; Immunology; CD19; Immune system; T cell; Antigen; Chemistry; Toll-like receptor; Medicine; Innate immune system","score_opus":0.013219299369120993,"score_gpt":0.28087107272211154,"score_spread":0.26765177335299056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061636798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9441215,0.0032332547,0.005610373,0.0024889992,0.0011824312,0.00007646967,0.00073076534,0.0004501868,0.042106073],"genre_scores_gemma":[0.9826691,0.0012364829,0.0012989409,0.00056846783,0.00022309404,0.000029632502,0.00048388683,0.000060106595,0.013430385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998683,0.000025795029,0.000009970377,0.000020738256,0.000025013775,0.00005008725],"domain_scores_gemma":[0.9998915,0.000023937071,0.000019313362,0.000017262368,0.00001085336,0.000037097663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018618138,0.0003073865,0.00014207877,0.00034377357,0.00018964036,0.00041758816,0.00024518778,0.0006975796,0.007468681],"category_scores_gemma":[0.00024342867,0.000188293,0.00026774104,0.00014317124,0.0003247707,0.0003336851,0.00022786594,0.0010825739,0.0023094106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0058872732,0.00080089323,0.002922575,0.00010790745,0.000036298916,0.0026320263,0.000057286983,0.00012910484,0.9344699,0.0033831424,0.007209734,0.042363856],"study_design_scores_gemma":[0.0013073431,0.0039775968,0.028450416,0.000075614196,0.00015199535,0.020542577,0.00016600186,0.002378511,0.9029327,0.0032190064,0.036772825,0.000025401918],"about_ca_topic_score_codex":0.0002064786,"about_ca_topic_score_gemma":0.00013878851,"teacher_disagreement_score":0.007468681,"about_ca_system_score_codex":0.00018488007,"about_ca_system_score_gemma":0.0001620129,"threshold_uncertainty_score":0.024985194},"labels":[],"label_agreement":null},{"id":"W2061967634","doi":"10.1371/journal.pone.0057426","title":"NF-κB-Dependent Role for Cold-Inducible RNA Binding Protein in Regulating Interleukin 1β","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Ottawa; Ottawa Hospital","funders":"National Cancer Institute; Ottawa Hospital Research Institute; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Biology; Small interfering RNA; RNA; Cell biology; Molecular biology; Transfection; Cell culture; Biochemistry; Gene; Genetics","score_opus":0.027110757486999936,"score_gpt":0.21870007100256786,"score_spread":0.19158931351556793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061967634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9074812,0.048258197,0.024998631,0.0008782519,0.0005525659,0.00018061225,0.0025267785,0.00067501934,0.014448793],"genre_scores_gemma":[0.9772958,0.0058560953,0.007250441,0.00033094102,0.0000872284,0.00013221901,0.001522158,0.00005605525,0.007469007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999821,0.000022771816,0.000010682058,0.00006333539,0.000042678592,0.00003956063],"domain_scores_gemma":[0.99987173,0.000012171951,0.00004097403,0.000013304249,0.000024206562,0.000037599595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017475717,0.0006035051,0.00024133748,0.0002435942,0.00029959806,0.00031785498,0.000235324,0.00027390153,0.0031403254],"category_scores_gemma":[0.000118864795,0.00019445775,0.0004627985,0.00011677561,0.00031141643,0.00026138712,0.00026800125,0.0008315591,0.00095561857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012875811,0.000023354081,0.0003034157,0.00010812565,0.000006925286,0.00011448686,0.000022361153,0.000026334665,0.99759007,0.000118678414,0.00009423901,0.0014631953],"study_design_scores_gemma":[0.000087339664,0.000705799,0.05710068,0.00010384095,0.00007966319,0.0019510168,0.00017829734,0.0020658025,0.9195081,0.000598356,0.017590923,0.000030162199],"about_ca_topic_score_codex":0.0003930117,"about_ca_topic_score_gemma":0.00049817224,"teacher_disagreement_score":0.0031403254,"about_ca_system_score_codex":0.00031610072,"about_ca_system_score_gemma":0.00027167422,"threshold_uncertainty_score":0.010505438},"labels":[],"label_agreement":null},{"id":"W2061990495","doi":"10.1007/s00262-008-0586-2","title":"Paclitaxel reduces regulatory T cell numbers and inhibitory function and enhances the anti-tumor effects of the TLR9 agonist PF-3512676 in the mouse","year":2008,"lang":"en","type":"article","venue":"Cancer Immunology Immunotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":135,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada); Terry Fox Research Institute","funders":"","keywords":"Paclitaxel; FOXP3; CD8; TLR9; Cytotoxic T cell; Immune system; IL-2 receptor; Agonist; Cancer research; Biology; T cell; Immunology; Pharmacology; Receptor; Internal medicine; Medicine; Cancer; Gene expression; In vitro","score_opus":0.005736430475352894,"score_gpt":0.21111194420224988,"score_spread":0.205375513726897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2061990495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928865,0.00081327424,0.0010818741,0.00036778176,0.00008490226,0.000036075577,0.0007343069,0.00032264888,0.0036726936],"genre_scores_gemma":[0.9879231,0.0009695404,0.0012888489,0.00013177801,0.000042745356,0.000051151586,0.0008578677,0.00006309816,0.00867189],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997367,0.00003503413,0.00001498709,0.000034653818,0.00006672739,0.00011185023],"domain_scores_gemma":[0.99981135,0.000027366623,0.00005787219,0.000023846182,0.000011249752,0.00006828857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012403917,0.0006126732,0.00047049418,0.0007578004,0.00024477293,0.00045186013,0.00031734898,0.00072337425,0.002253294],"category_scores_gemma":[0.00011282599,0.0002581725,0.0003604366,0.00026753457,0.00048916537,0.00034222263,0.00012779183,0.0018494151,0.0007286963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001698664,0.00043591284,0.00013768997,0.0000505565,0.000010189904,0.00007883597,0.00001530811,0.0004333002,0.993032,0.0002575699,0.00033625244,0.0035138193],"study_design_scores_gemma":[0.00013431255,0.0014832307,0.0011595334,0.0000071965283,0.000026118054,0.00012217838,0.00001827807,0.0008502694,0.99439055,0.000079566475,0.0017207327,0.000008043604],"about_ca_topic_score_codex":0.00089311454,"about_ca_topic_score_gemma":0.0015762962,"teacher_disagreement_score":0.002253294,"about_ca_system_score_codex":0.0005100031,"about_ca_system_score_gemma":0.00045033472,"threshold_uncertainty_score":0.0075380206},"labels":[],"label_agreement":null},{"id":"W2062191416","doi":"10.1111/j.1365-2141.2005.05893.x","title":"Differential immune effects mediated by Toll‐like receptors stimulation in precursor B‐cell acute lymphoblastic leukaemia","year":2005,"lang":"en","type":"article","venue":"British Journal of Haematology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"TLR9; TLR2; Immune system; Immunology; Receptor; T cell; Immunogenicity; Toll-like receptor; Biology; Immune tolerance; Cancer research; Innate immune system; Medicine; Internal medicine; Gene expression","score_opus":0.002975571795830646,"score_gpt":0.20532692617898107,"score_spread":0.20235135438315044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062191416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973279,0.001504463,0.00028416424,0.000019231888,0.000010884624,0.000015305372,0.00008601209,0.000011072123,0.0007407698],"genre_scores_gemma":[0.9973126,0.0014405763,0.0005092484,0.000037090125,0.000013305706,0.00003617173,0.00021530097,0.000005467107,0.00043021468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967194,0.00016245783,0.000026646716,0.000025088819,0.000047706024,0.00006618792],"domain_scores_gemma":[0.9998379,0.00007113114,0.000023396795,0.000018882705,0.000017179706,0.00003158581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025547855,0.00022756393,0.00027938135,0.0003672216,0.00012890481,0.00039168447,0.000111279056,0.00024565225,0.0011971074],"category_scores_gemma":[0.00029269033,0.0001878927,0.00020243612,0.00026319717,0.00018751169,0.00024910734,0.00030498614,0.00051116385,0.0003859569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071578595,0.000056911642,0.0013220982,0.0001283079,0.0000051912843,0.00022267978,0.000058515845,0.00005481706,0.9941341,0.00008451149,0.000030719744,0.0031863598],"study_design_scores_gemma":[0.00016689318,0.004380342,0.09339876,0.00004425258,0.000097992124,0.0036674093,0.00040381376,0.0006046001,0.8896151,0.0003107496,0.007293312,0.000016693417],"about_ca_topic_score_codex":0.00012657882,"about_ca_topic_score_gemma":0.0001656343,"teacher_disagreement_score":0.0011971074,"about_ca_system_score_codex":0.00018027588,"about_ca_system_score_gemma":0.0000933654,"threshold_uncertainty_score":0.004004717},"labels":[],"label_agreement":null},{"id":"W2062428616","doi":"10.1067/msy.2000.108060","title":"Liposomal antioxidants provide prolonged protection against acute respiratory distress syndrome","year":2000,"lang":"en","type":"article","venue":"Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital","funders":"","keywords":"Medicine; Bronchoalveolar lavage; Lung; Myeloperoxidase; Acetylcysteine; Pharmacology; ARDS; Resuscitation; Respiratory distress; Anesthesia; Albumin; Immunology; Internal medicine; Inflammation; Antioxidant","score_opus":0.014406628830705965,"score_gpt":0.21794358452999152,"score_spread":0.20353695569928557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062428616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922386,0.0055176453,0.0010331334,0.00027993173,0.00020147889,0.000042409287,0.00011569716,0.000082659884,0.0004886277],"genre_scores_gemma":[0.99509865,0.002402129,0.00059674936,0.0001355562,0.00011792229,0.00003511836,0.00023822093,0.000013508999,0.0013621823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999033,0.000023001827,0.0000087098515,0.000013989418,0.00000888357,0.00004202647],"domain_scores_gemma":[0.99973613,0.000044518467,0.00006459485,0.000056358578,0.000022771706,0.00007556831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028787297,0.0005601374,0.0006810134,0.00015212366,0.0001744994,0.00033064725,0.00025242416,0.000529792,0.002944677],"category_scores_gemma":[0.00028633684,0.0001606426,0.00038757978,0.00012419942,0.00042663506,0.00068183296,0.00029738122,0.0012195285,0.0005086028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.09051483,0.0024593347,0.00091432675,0.0005670507,0.00021334937,0.00025457426,0.00010200129,0.00031204923,0.84319025,0.00038277966,0.0009313338,0.060158063],"study_design_scores_gemma":[0.011916654,0.12553962,0.026003135,0.00021205052,0.0007076613,0.0011824516,0.00036473392,0.0017231721,0.8207572,0.00073282805,0.010792394,0.00006807586],"about_ca_topic_score_codex":0.00021809978,"about_ca_topic_score_gemma":0.00029870137,"teacher_disagreement_score":0.002944677,"about_ca_system_score_codex":0.000117715055,"about_ca_system_score_gemma":0.0002621591,"threshold_uncertainty_score":0.009850919},"labels":[],"label_agreement":null},{"id":"W2062459184","doi":"10.1111/j.1365-2567.2008.02946.x","title":"Macrophage interleukin‐6 and tumour necrosis factor‐α are induced by coronavirus fixation to Toll‐like receptor 2/heparan sulphate receptors but not carcinoembryonic cell adhesion antigen 1a","year":2009,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Receptor; Tumor necrosis factor alpha; Toll-like receptor; Immunology; Carcinoembryonic antigen; Biology; Cancer research; Medicine; Internal medicine; Cancer; Innate immune system; Biochemistry","score_opus":0.016002910668542685,"score_gpt":0.2470087462992264,"score_spread":0.23100583563068372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062459184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99644345,0.0013832563,0.0011700601,0.00004599286,0.0000336473,0.000030803207,0.00013275619,0.000050284205,0.00070973224],"genre_scores_gemma":[0.99613625,0.00075225823,0.0008770726,0.00005687288,0.000021090684,0.00007426144,0.0003293555,0.000009556491,0.00174309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968493,0.00005553883,0.00003105423,0.000041399973,0.000074536656,0.00011260765],"domain_scores_gemma":[0.9997379,0.000028836082,0.0000864673,0.000036069072,0.00003407901,0.00007659562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020459681,0.0006220378,0.00028436148,0.00033538658,0.0001275644,0.00023661043,0.00010722691,0.00039896503,0.0011088474],"category_scores_gemma":[0.00017657939,0.00024106106,0.0005449636,0.00013491607,0.00037015378,0.00022180687,0.00029967577,0.0006316081,0.00044283815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033152624,0.000024124256,0.00040028672,0.000028139018,0.0000040182754,0.00009488735,0.000015506872,0.0000136088265,0.9985935,0.000024397432,0.000012888646,0.00045702324],"study_design_scores_gemma":[0.000102305086,0.0012622419,0.033445805,0.000012522606,0.00003244269,0.0009077686,0.00007374432,0.00073160714,0.961857,0.00012675313,0.001439817,0.000008012184],"about_ca_topic_score_codex":0.00017882272,"about_ca_topic_score_gemma":0.00020714094,"teacher_disagreement_score":0.0011088474,"about_ca_system_score_codex":0.00019624569,"about_ca_system_score_gemma":0.00014684348,"threshold_uncertainty_score":0.003709495},"labels":[],"label_agreement":null},{"id":"W2062478417","doi":"10.1111/j.1462-5822.2006.00763.x","title":"G-CSF-mediated inhibition of JNK is a key mechanism for Lactobacillus rhamnosus-induced suppression of TNF production in macrophages","year":2006,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":142,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lactobacillus rhamnosus; Tumor necrosis factor alpha; Biology; Microbiology; Lipopolysaccharide; Cytokine; Kinase; Cell biology; Immunology; Lactobacillus; Bacteria","score_opus":0.008895413245711829,"score_gpt":0.20953680641849254,"score_spread":0.2006413931727807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062478417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907227,0.004714806,0.0025551107,0.0002897568,0.000052766016,0.00004667215,0.00032975522,0.00008479693,0.0012034473],"genre_scores_gemma":[0.9942537,0.0017983142,0.0024054558,0.0000961102,0.00001956196,0.00006341782,0.00028631074,0.000010785703,0.0010663767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998913,0.00002485747,0.000010292386,0.000013693446,0.000024329678,0.00003553344],"domain_scores_gemma":[0.99994576,0.000006321616,0.000019221468,0.000006339003,0.0000068307545,0.000015582267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001377522,0.00046950718,0.0002424121,0.0001481636,0.00011892058,0.00017041524,0.00017171098,0.00024298785,0.0005597464],"category_scores_gemma":[0.00007508377,0.00009263978,0.000265863,0.00009096022,0.0002942061,0.00013333073,0.00018479531,0.00049780984,0.0003081917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003151427,0.000024037465,0.000079722966,0.000055111585,0.0000027947826,0.00006597717,0.000007807232,0.00002972151,0.99848086,0.000042802116,0.000026633654,0.0008694124],"study_design_scores_gemma":[0.00006374392,0.00046887322,0.0037942803,0.000012346674,0.000012368737,0.0003306441,0.000025347215,0.0003887874,0.9932047,0.0000777385,0.001617099,0.000004084588],"about_ca_topic_score_codex":0.00031571402,"about_ca_topic_score_gemma":0.0004119924,"teacher_disagreement_score":0.0005597464,"about_ca_system_score_codex":0.0002036651,"about_ca_system_score_gemma":0.00030341392,"threshold_uncertainty_score":0.0018725395},"labels":[],"label_agreement":null},{"id":"W2062835892","doi":"10.1016/j.cyto.2008.01.006","title":"LPS/TLR4 signal transduction pathway","year":2008,"lang":"en","type":"review","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3239,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto","funders":"","keywords":"TLR4; Proinflammatory cytokine; Signal transduction; Lipopolysaccharide; Toll-like receptor; Cell biology; Receptor; Stimulation; Immune system; Chemistry; Biology; Immunology; Innate immune system; Inflammation; Neuroscience; Biochemistry","score_opus":0.03086309541098331,"score_gpt":0.27086544017601694,"score_spread":0.24000234476503363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062835892","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029287444,0.9933611,0.0011158389,0.0007480304,0.0017716631,0.000017275743,0.00006914879,0.00003476933,0.0025893324],"genre_scores_gemma":[0.0011213446,0.9922009,0.0010775785,0.00055216596,0.00082871044,0.000026551894,0.00013823745,0.0000039446336,0.0040505514],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987257,0.00001622033,0.000021022883,0.00002623626,0.000045387605,0.000018613007],"domain_scores_gemma":[0.9998503,0.0000385439,0.000026280899,0.0000073098113,0.00005545756,0.000022210448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041583437,0.0015051943,0.0015370923,0.0012148387,0.00026587085,0.0011287616,0.0012243364,0.0013426642,0.0039257817],"category_scores_gemma":[0.00038331078,0.00036502446,0.00038312757,0.0013489383,0.0006354967,0.0016487185,0.00076656305,0.002560525,0.004639377],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002657667,0.00008297032,0.00013252262,0.008728374,0.00005550913,0.00038396273,0.000020814889,0.00042804045,0.008983449,0.0022824893,0.04887703,0.92975914],"study_design_scores_gemma":[0.000038585542,0.00008207204,0.000520155,0.0011761917,0.00011793996,0.0014357085,0.0000406195,0.0001855541,0.0025644882,0.0018097655,0.992007,0.000021913957],"about_ca_topic_score_codex":0.00059610035,"about_ca_topic_score_gemma":0.0010118387,"teacher_disagreement_score":0.0039257817,"about_ca_system_score_codex":0.0007007455,"about_ca_system_score_gemma":0.0013195379,"threshold_uncertainty_score":0.013132989},"labels":[],"label_agreement":null},{"id":"W2062866224","doi":"10.1016/j.vetimm.2008.08.001","title":"CD14+ cells are required for IL-12 response in bovine blood mononuclear cells activated with Toll-like receptor (TLR) 7 and TLR8 ligands","year":2008,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases","keywords":"CD14; Biology; Peripheral blood mononuclear cell; Immune system; TLR7; Innate immune system; Toll-like receptor; TLR2; Immunology; Receptor; Cytokine; Molecular biology; In vitro; Biochemistry","score_opus":0.014481941030985964,"score_gpt":0.21729686081365068,"score_spread":0.20281491978266472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062866224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99416095,0.0016595378,0.0013568494,0.00014866347,0.00009241242,0.000049133676,0.0004802574,0.000041714644,0.00201043],"genre_scores_gemma":[0.9916808,0.0005782483,0.0013396591,0.00016883895,0.00006191768,0.000097813914,0.0012927597,0.000036479174,0.004743334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99910283,0.00017476898,0.0000855979,0.0001203308,0.000139114,0.00037731926],"domain_scores_gemma":[0.9994191,0.00011129628,0.0001257157,0.000075859476,0.00010199853,0.00016613599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032733017,0.00031950776,0.0004993225,0.00048530058,0.00052152365,0.00097025925,0.00035406486,0.00076991227,0.00554692],"category_scores_gemma":[0.00049741945,0.00044496023,0.00039431953,0.00021517374,0.00029190278,0.0003442104,0.00043586403,0.0010868328,0.0022607266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007449688,0.000058423473,0.0015708877,0.00006162162,0.0000047269405,0.00016164886,0.00004952485,0.000019539444,0.9962681,0.00008250518,0.00010770683,0.00087030674],"study_design_scores_gemma":[0.0003933109,0.0012630528,0.17443696,0.00013958078,0.000116473944,0.0021998966,0.0012005479,0.0019869832,0.8032233,0.0004876771,0.014521723,0.000030547624],"about_ca_topic_score_codex":0.0016831126,"about_ca_topic_score_gemma":0.002659998,"teacher_disagreement_score":0.00554692,"about_ca_system_score_codex":0.0004738358,"about_ca_system_score_gemma":0.00030167808,"threshold_uncertainty_score":0.018556297},"labels":[],"label_agreement":null},{"id":"W2062892895","doi":"10.1139/w10-002","title":"Effect of recombinant Panton–Valentine leukocidin in vitro on apoptosis and cytokine production of human alveolar macrophages","year":2010,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Science Foundation","keywords":"Bronchoalveolar lavage; Tumor necrosis factor alpha; Apoptosis; Cytokine; Necrosis; Microbiology; Interleukin 8; Flow cytometry; Pulmonary alveolus; Secretion; Leukocidin; Biology; Immunology; Cytotoxicity; Molecular biology; Chemistry; In vitro; Macrophage; Medicine; Internal medicine; Biochemistry; Lung; Staphylococcus aureus; Bacteria","score_opus":0.004843365065158082,"score_gpt":0.21934247310355304,"score_spread":0.21449910803839495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062892895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943327,0.0037465447,0.00079912745,0.00009311227,0.000034548735,0.000042885047,0.00013514707,0.000023323042,0.0007926122],"genre_scores_gemma":[0.99630594,0.0012399255,0.0012266726,0.00008213602,0.000025498286,0.000046031793,0.00034898226,0.0000046626114,0.0007200591],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996289,0.00016551404,0.000044928154,0.000034182605,0.000052232415,0.00007425564],"domain_scores_gemma":[0.9997656,0.000094017836,0.00003654206,0.000029472596,0.000037548238,0.000036850233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044793927,0.00035159642,0.000417302,0.00016930401,0.00016924736,0.0002919593,0.0001688489,0.00032176953,0.00045663942],"category_scores_gemma":[0.00031997357,0.0001547672,0.00027465806,0.0001736289,0.0001902139,0.00014098253,0.00023897721,0.00040517747,0.0002532474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015520074,0.00020915235,0.00062581216,0.00014860218,0.000017270233,0.00020357565,0.000084089,0.0002239091,0.99442977,0.00003461682,0.00006437411,0.0024068467],"study_design_scores_gemma":[0.00019570554,0.00577547,0.0075074635,0.000025104093,0.000056953017,0.00045091825,0.00006715449,0.0013823926,0.98281175,0.000047015532,0.0016708529,0.000009268879],"about_ca_topic_score_codex":0.00084417127,"about_ca_topic_score_gemma":0.0010173697,"teacher_disagreement_score":0.00084417127,"about_ca_system_score_codex":0.00022590776,"about_ca_system_score_gemma":0.000289079,"threshold_uncertainty_score":0.0023689866},"labels":[],"label_agreement":null},{"id":"W2062904789","doi":"10.1186/cc5166","title":"Tyrosine phosphorylation modulates rat vascular response to experimental endotoxemia in vivo and in vitro","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Phosphorylation; Medicine; In vivo; Vascular smooth muscle; Nitric oxide; In vitro; Pharmacology; Contraction (grammar); Tyrosine phosphorylation; Tyrosine; Cell biology; Internal medicine; Smooth muscle; Biochemistry; Chemistry; Biology","score_opus":0.008326514990405055,"score_gpt":0.2729501605401806,"score_spread":0.2646236455497756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2062904789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99547714,0.0021565636,0.0008258305,0.0001016003,0.000058073296,0.000017973975,0.00024274267,0.0000383818,0.0010817291],"genre_scores_gemma":[0.99465215,0.0017907108,0.00083611766,0.000053660006,0.000042522017,0.0000396635,0.000768055,0.000019308836,0.0017978412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972063,0.00007387438,0.000018066594,0.000027179509,0.000036035613,0.00012417043],"domain_scores_gemma":[0.99966085,0.00008018462,0.00007088737,0.00004647187,0.000032893084,0.00010867038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037141942,0.00050814584,0.00039149524,0.00043537194,0.00021451824,0.00029795986,0.00023485643,0.00033020374,0.0028288928],"category_scores_gemma":[0.0003917386,0.00029288852,0.000418421,0.00028629915,0.00038619043,0.00025380455,0.00019815436,0.0010267782,0.00064695295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010167415,0.00020629434,0.0003576572,0.00005642199,0.00001117075,0.00009836333,0.000037591853,0.00010480413,0.9971046,0.000082252365,0.00006292378,0.00086108997],"study_design_scores_gemma":[0.000102709884,0.0036099672,0.014371644,0.000022030801,0.00008386728,0.00039079253,0.000090426176,0.0012385888,0.97862464,0.00013715899,0.001314901,0.000013218322],"about_ca_topic_score_codex":0.00079085375,"about_ca_topic_score_gemma":0.0009647727,"teacher_disagreement_score":0.0028288928,"about_ca_system_score_codex":0.00027121382,"about_ca_system_score_gemma":0.00020953278,"threshold_uncertainty_score":0.009463608},"labels":[],"label_agreement":null},{"id":"W2063209470","doi":"10.1016/j.it.2010.07.004","title":"Impaired Toll-like receptor 7 and 9 signaling: from chronic viral infections to cancer","year":2010,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":103,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National Du Cancer; Agence Nationale de Recherches sur le Sida et les Hépatites Virales; Institut National de la Santé et de la Recherche Médicale; EMBO; CNIB; Association pour la Recherche sur le Cancer; Breast Cancer Research Foundation","keywords":"TLR9; TLR7; Immunology; Biology; Toll-like receptor; Carcinogenesis; Cancer; Virus; Immune system; Receptor; Interferon; Virology; Innate immune system; Viral hepatitis; Cancer research; Gene; Gene expression","score_opus":0.024688907550537837,"score_gpt":0.3181120508620398,"score_spread":0.293423143311502,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063209470","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002145507,0.9968273,0.0002692727,0.0008670861,0.0008928856,0.0000029428898,0.000024852916,0.000017228447,0.0008837486],"genre_scores_gemma":[0.0011466696,0.9961851,0.00019871524,0.0005461075,0.00080343016,0.0000054685506,0.000044908338,0.0000018840858,0.0010677887],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987125,0.000015229086,0.000019514202,0.000024026718,0.000051733903,0.0000181557],"domain_scores_gemma":[0.99976116,0.00007189452,0.00004182994,0.00000818534,0.000078464574,0.00003849907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004185293,0.0009124485,0.001265149,0.00075397873,0.00017024032,0.00090292736,0.00077979063,0.0013090995,0.0023962338],"category_scores_gemma":[0.0005731529,0.00019657024,0.00024239504,0.0008686525,0.000523149,0.0012624952,0.0005553608,0.001925235,0.002516506],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015776379,0.00004518422,0.00023902976,0.0044821203,0.000049114642,0.00026987822,0.000021691847,0.00020002277,0.0037996096,0.002241075,0.0653102,0.9231843],"study_design_scores_gemma":[0.00004614855,0.00010497669,0.0013995715,0.0013228751,0.00009272203,0.0023990832,0.00006780222,0.00012137925,0.0012959837,0.0024191644,0.9907122,0.00001809716],"about_ca_topic_score_codex":0.0005649611,"about_ca_topic_score_gemma":0.0010914864,"teacher_disagreement_score":0.0023962338,"about_ca_system_score_codex":0.00057313486,"about_ca_system_score_gemma":0.00087663176,"threshold_uncertainty_score":0.008016169},"labels":[],"label_agreement":null},{"id":"W2063211660","doi":"10.1038/mt.2014.17","title":"Enriched Protein Screening of Human Bone Marrow Mesenchymal Stromal Cell Secretions Reveals MFAP5 and PENK as Novel IL-10 Modulators","year":2014,"lang":"en","type":"article","venue":"Molecular Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of Allergy and Infectious Diseases; National Institutes of Health; B.P. Koirala Institute of Health Sciences; Western University; National Human Genome Research Institute; National Institute of Diabetes and Digestive and Kidney Diseases; Shriners Hospitals for Children","keywords":"Stromal cell; Biology; Bone marrow; Mesenchymal stem cell; Cell; Secretory protein; In vivo; In vitro; Molecular biology; Cell culture; Cell biology; Gene; Computational biology; Cancer research; Immunology; Biochemistry; Genetics","score_opus":0.009205371349678429,"score_gpt":0.230502938022534,"score_spread":0.22129756667285555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063211660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898878,0.002104968,0.004773627,0.00017103234,0.000016714359,0.00007053605,0.0017263403,0.00007879204,0.0011700792],"genre_scores_gemma":[0.9816518,0.001798083,0.011093758,0.00019353727,0.000010623152,0.0000654533,0.0033758103,0.000021542133,0.0017894168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988437,0.000018523746,0.000011070236,0.000021569906,0.000042088326,0.000022306856],"domain_scores_gemma":[0.99995804,0.0000103421335,0.000008154575,0.0000039103957,0.0000081861235,0.000011393155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016190155,0.0003835864,0.00027612472,0.00031042224,0.00012419409,0.0002500413,0.00013787887,0.00016553371,0.00068806426],"category_scores_gemma":[0.00015653647,0.00008065116,0.000271972,0.00023225705,0.00011439554,0.000121090256,0.00017210947,0.00024411734,0.00025740493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017542113,0.000023996292,0.0008047289,0.00003162398,0.000009920755,0.000079329075,0.000007231393,0.00013659103,0.9947137,0.000019561066,0.000041706084,0.003956131],"study_design_scores_gemma":[0.000014468799,0.0003167018,0.014734043,0.000006324218,0.000024255185,0.00030737856,0.000030137368,0.00166375,0.9810255,0.00003754159,0.0018347816,0.000005198956],"about_ca_topic_score_codex":0.0005300602,"about_ca_topic_score_gemma":0.00091572327,"teacher_disagreement_score":0.00068806426,"about_ca_system_score_codex":0.00020971628,"about_ca_system_score_gemma":0.00020797132,"threshold_uncertainty_score":0.0023018718},"labels":[],"label_agreement":null},{"id":"W2063438040","doi":"10.1111/j.1574-695x.2003.tb00648.x","title":"Pro-inflammatory cytokine and chemokine release by human brain microvascular endothelial cells stimulated by<i>Streptococcus suis</i>serotype 2","year":2003,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":127,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Beijing Municipal Education Commission","keywords":"Chemokine; Cytokine; Streptococcus suis; Biology; Microbiology; Immunology; Serotype; Virology; Inflammation; Virulence; Gene","score_opus":0.0044558827734722025,"score_gpt":0.21565186969963412,"score_spread":0.21119598692616193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063438040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99632806,0.0017082078,0.00060462824,0.000079137404,0.00006386807,0.000025998177,0.0003571843,0.000019076278,0.00081381993],"genre_scores_gemma":[0.9943481,0.0013656634,0.0016498822,0.00012116057,0.000076683005,0.00007306685,0.0011158829,0.000004109259,0.0012454838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972147,0.00008649722,0.000024250867,0.0000317673,0.000054718803,0.00008139901],"domain_scores_gemma":[0.99989486,0.000031106312,0.000021386886,0.000011070817,0.000023593137,0.000018028484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023610788,0.00040747406,0.00029904358,0.00020164414,0.00011633437,0.00032467904,0.000089857305,0.00026852122,0.0015784573],"category_scores_gemma":[0.00031527304,0.00014583518,0.00026005277,0.00016391953,0.00011516244,0.00018070043,0.00013854825,0.00035446725,0.00043945631],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006037423,0.000101923164,0.0009653178,0.000074001204,0.000012886119,0.00020797321,0.0000695476,0.000062978295,0.99587494,0.00003027544,0.00014911406,0.0018472031],"study_design_scores_gemma":[0.00014563584,0.0055729896,0.060294732,0.000053068226,0.00006664498,0.0012332785,0.00039921544,0.0025589743,0.92615426,0.00009486861,0.003398855,0.00002748104],"about_ca_topic_score_codex":0.0008276382,"about_ca_topic_score_gemma":0.00095860864,"teacher_disagreement_score":0.0015784573,"about_ca_system_score_codex":0.00014941864,"about_ca_system_score_gemma":0.00020152997,"threshold_uncertainty_score":0.005280435},"labels":[],"label_agreement":null},{"id":"W2063728600","doi":"10.1016/j.jaci.2009.02.019","title":"Toll-like receptor 4 variants reduce airway response in human subjects at high endotoxin levels in a swine facility","year":2009,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Genome Prairie; University of Saskatchewan; University of Alberta","funders":"","keywords":"TLR4; Medicine; Respiratory system; Vital capacity; Internal medicine; Immunology; Receptor; Physiology; Lung function; Lung","score_opus":0.027065534620945533,"score_gpt":0.30942719065438024,"score_spread":0.2823616560334347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2063728600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99983037,0.00001303806,0.00004157273,0.000018309185,0.0000047097096,0.000004689451,0.000009648768,0.00000210288,0.00007538877],"genre_scores_gemma":[0.99955946,0.000017112123,0.00005838852,0.000046781788,0.000004308682,0.000004656064,0.00004028821,0.0000018324824,0.000267151],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99978286,0.000080450256,0.000008812602,0.00003633634,0.000025029178,0.00006656165],"domain_scores_gemma":[0.99967575,0.000052678646,0.000061523584,0.0000264113,0.000036444813,0.00014720073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004588998,0.0003642291,0.00033276097,0.00019010439,0.00064005493,0.00037399703,0.00021629418,0.0003586125,0.0016403126],"category_scores_gemma":[0.00045768073,0.00018750453,0.00023512416,0.00012295788,0.00048959686,0.000246335,0.0002448789,0.0004570745,0.00023217624],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019947441,0.007660964,0.65126276,0.000074419666,0.0001342082,0.0031285377,0.0012153712,0.00021673691,0.3024268,0.0001948287,0.0012510647,0.012486856],"study_design_scores_gemma":[0.00019746549,0.029315563,0.95475256,0.000011718532,0.00009723305,0.0014712063,0.0019462974,0.0006424788,0.010912275,0.00008359804,0.0005507398,0.000018878161],"about_ca_topic_score_codex":0.0026700026,"about_ca_topic_score_gemma":0.0036989755,"teacher_disagreement_score":0.0026700026,"about_ca_system_score_codex":0.0002736199,"about_ca_system_score_gemma":0.00053030124,"threshold_uncertainty_score":0.005487442},"labels":[],"label_agreement":null},{"id":"W2064055642","doi":"10.1016/j.jaci.2007.04.038","title":"Cellular and humoral aberrations in a kindred with IL-1 receptor–associated kinase 4 deficiency","year":2007,"lang":"en","type":"letter","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Receptor; Immunology; Medicine; Biology; Internal medicine","score_opus":0.019298483745280127,"score_gpt":0.27238107669488393,"score_spread":0.2530825929496038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064055642","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96414864,0.0017448111,0.0015298037,0.013795704,0.0011333489,0.000085957014,0.00034685634,0.00029933467,0.016915485],"genre_scores_gemma":[0.99331385,0.0005433572,0.0009462988,0.00181462,0.00070052163,0.000018152732,0.00009512069,0.000051477713,0.0025166643],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9994337,0.00013936819,0.000067027926,0.00012398807,0.00010951859,0.0001263483],"domain_scores_gemma":[0.99757975,0.0014916939,0.00026623035,0.00017523,0.00013156966,0.00035560515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006950562,0.002499395,0.0009915432,0.0013048061,0.0014983166,0.00080728554,0.0014053896,0.0050950036,0.003773416],"category_scores_gemma":[0.0030563765,0.00064060296,0.00086003606,0.0006274541,0.002208291,0.00082414004,0.0008947943,0.0032845377,0.0005363296],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006332006,0.000058886857,0.0060923817,0.000066727305,0.000063599415,0.9804735,0.00028290448,0.000116420546,0.008148279,0.0005428801,0.0017682796,0.0017528897],"study_design_scores_gemma":[0.00020800778,0.00039457055,0.023694655,0.000041250893,0.00024422834,0.96384907,0.00030496682,0.001123768,0.005354122,0.0006367424,0.004113934,0.000034655997],"about_ca_topic_score_codex":0.0023460726,"about_ca_topic_score_gemma":0.0017219835,"teacher_disagreement_score":0.0050950036,"about_ca_system_score_codex":0.001255891,"about_ca_system_score_gemma":0.0004388558,"threshold_uncertainty_score":0.01262337},"labels":[],"label_agreement":null},{"id":"W2064229941","doi":"10.1073/pnas.0308496101","title":"Toll-like receptor 3-mediated activation of NF-κB and IRF3 diverges at Toll-IL-1 receptor domain-containing adapter inducing IFN-β","year":2004,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":384,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"TRIF; IRF3; TLR3; Adapter (computing); Signal transducing adaptor protein; IκB kinase; Toll-like receptor; Receptor; Signal transduction; Cell biology; Chemistry; Molecular biology; NF-κB; Biology; Innate immune system; Biochemistry; Electrical engineering; Engineering","score_opus":0.023702561937991286,"score_gpt":0.25526327879012733,"score_spread":0.23156071685213606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064229941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9726141,0.0042908047,0.013371339,0.00022812517,0.00010541929,0.00009515069,0.0006135545,0.00026349936,0.008417998],"genre_scores_gemma":[0.9859774,0.0015138768,0.0053410493,0.00017029043,0.000020004461,0.00008204012,0.0011488989,0.000026962984,0.0057194964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997514,0.000030423853,0.00001815233,0.000035910984,0.00008405744,0.000080181715],"domain_scores_gemma":[0.9999113,0.0000060979964,0.00002417144,0.00000935121,0.000020150359,0.000028910257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002593226,0.00041587834,0.00019204961,0.00033102007,0.0002302662,0.00024624623,0.00021055437,0.00031186003,0.0031566354],"category_scores_gemma":[0.00014904483,0.0001753004,0.0008736907,0.00013524453,0.00017859541,0.00027496644,0.00041692492,0.0009175386,0.001455898],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023250554,0.000025145297,0.0004200665,0.00005772252,0.000008737474,0.00013584438,0.000033383978,0.000038850758,0.99562824,0.00033124647,0.00007005539,0.0030181038],"study_design_scores_gemma":[0.00013583625,0.00034343227,0.030869998,0.000041779123,0.00003485547,0.0028229984,0.00016434322,0.0019628168,0.9489568,0.00097533007,0.013668403,0.000023465327],"about_ca_topic_score_codex":0.000257295,"about_ca_topic_score_gemma":0.00021854858,"teacher_disagreement_score":0.0031566354,"about_ca_system_score_codex":0.00026397823,"about_ca_system_score_gemma":0.00024014756,"threshold_uncertainty_score":0.010559976},"labels":[],"label_agreement":null},{"id":"W2064754526","doi":"10.1089/vim.2009.0054","title":"Disparate Regulation of LPS-Induced MAPK Signaling and IL-12p40 Expression Between Different Myeloid Cell Types with and without HIV Infection","year":2010,"lang":"en","type":"article","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Children's Hospital of Eastern Ontario; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"p38 mitogen-activated protein kinases; Transcription factor; Sp1 transcription factor; Biology; MAPK/ERK pathway; Molecular biology; Cell biology; Monocyte; Cell culture; Promoter; Signal transduction; Gene expression; Immunology; Gene; Biochemistry; Genetics","score_opus":0.007815279779781276,"score_gpt":0.21724685288516882,"score_spread":0.20943157310538754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064754526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974269,0.0009906029,0.0008441603,0.000022726648,0.00001562717,0.000027230786,0.00026175968,0.000014279502,0.00039673626],"genre_scores_gemma":[0.9955266,0.001083112,0.0016615638,0.000041219584,0.000019365181,0.0000990681,0.00075778534,0.000008659291,0.0008025718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954176,0.00009084826,0.000057340792,0.000078308556,0.0000899123,0.00014179914],"domain_scores_gemma":[0.9998363,0.000047123634,0.000030282477,0.00002291313,0.000028532852,0.000034865923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019772047,0.00020622103,0.00031653288,0.00033671566,0.00021463935,0.00049311284,0.00015914315,0.00024132755,0.0012036035],"category_scores_gemma":[0.00028850604,0.00018414557,0.00024574852,0.00027298543,0.00027955027,0.00021865321,0.00025870992,0.000524157,0.00025452184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043220966,0.000038707956,0.0009922958,0.0000365466,0.0000068002023,0.00007599298,0.00005307498,0.00002152625,0.9970874,0.000058557627,0.000015678419,0.0011811741],"study_design_scores_gemma":[0.00003869205,0.00082646817,0.05641041,0.0000183311,0.000060817405,0.0011740702,0.00026167632,0.00074984005,0.93843126,0.000135259,0.0018775291,0.00001560811],"about_ca_topic_score_codex":0.00028859323,"about_ca_topic_score_gemma":0.0003041481,"teacher_disagreement_score":0.0012036035,"about_ca_system_score_codex":0.00020170705,"about_ca_system_score_gemma":0.00017272137,"threshold_uncertainty_score":0.004026413},"labels":[],"label_agreement":null},{"id":"W2064757440","doi":"10.1016/s0145-305x(99)00086-5","title":"Purification of functional T lymphocytes from splenocytes of the beluga whales (Delphinapterus leucas)","year":2000,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institut National de la Recherche Scientifique","funders":"Bayer Fund; World Wildlife Fund; U.S. Environmental Protection Agency","keywords":"Leucas; Beluga Whale; Biology; Beluga; Splenocyte; Zoology; Fishery; Immunology; Immune system; Ecology","score_opus":0.030406014861207073,"score_gpt":0.23652467945781036,"score_spread":0.20611866459660327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064757440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99136657,0.0022850733,0.002398258,0.00019416287,0.00008495641,0.000076057535,0.0009937863,0.000032140353,0.0025690508],"genre_scores_gemma":[0.98397094,0.0015725824,0.0026383034,0.00032475477,0.00013018027,0.00009302988,0.005499864,0.00002391514,0.005746445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992037,0.00000948421,0.0000075343987,0.000019838535,0.000012442208,0.000030431986],"domain_scores_gemma":[0.9998889,0.000032577995,0.000009892698,0.00001284292,0.000025224886,0.000030475578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013228142,0.0004126779,0.00016351583,0.00028588102,0.00025584025,0.0003864351,0.00022895221,0.0003145096,0.0015020573],"category_scores_gemma":[0.00019900165,0.00012945333,0.000274838,0.00015416715,0.00016855435,0.00022018,0.00030812738,0.000890847,0.00080089405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014251641,0.00003631166,0.0010823614,0.000046397723,0.0000068389604,0.00009303447,0.000060780265,0.000035531037,0.9964025,0.00006399461,0.00007119676,0.0019584675],"study_design_scores_gemma":[0.00035854313,0.00324862,0.16462943,0.00011380322,0.00025984462,0.0034760276,0.0015113193,0.0015340098,0.7973917,0.0008298177,0.02660535,0.000041486575],"about_ca_topic_score_codex":0.0010378715,"about_ca_topic_score_gemma":0.001416168,"teacher_disagreement_score":0.0015020573,"about_ca_system_score_codex":0.00011604542,"about_ca_system_score_gemma":0.00013945923,"threshold_uncertainty_score":0.00502491},"labels":[],"label_agreement":null},{"id":"W2064841728","doi":"10.1016/j.micpath.2004.02.004","title":"Loss of lipopolysaccharide receptor CD14 from the surface of human macrophage-like cells mediated by Porphyromonas gingivalis outer membrane vesicles","year":2004,"lang":"en","type":"article","venue":"Microbial Pathogenesis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":117,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Porphyromonas gingivalis; Lipopolysaccharide; Bacterial outer membrane; Macrophage; Vesicle; CD14; Chemistry; Cell biology; Bacteroidaceae; Receptor; Microbiology; Bacteria; Membrane; Biology; In vitro; Biochemistry; Immunology; Escherichia coli; Gene","score_opus":0.008004924815243246,"score_gpt":0.20802223496509853,"score_spread":0.20001731014985527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064841728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825734,0.000630809,0.00060810597,0.00007163346,0.00001442557,0.0000073395,0.000049083927,0.000010998912,0.00035019472],"genre_scores_gemma":[0.9979164,0.00030571024,0.00034932676,0.00003231918,0.0000052495016,0.000009941768,0.00015026196,0.0000074776367,0.0012232399],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997682,0.000044506607,0.00001804636,0.000024675226,0.000063143154,0.00008149447],"domain_scores_gemma":[0.99989665,0.000018117347,0.000028350883,0.00002347275,0.000014897482,0.000018511611],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018596971,0.0003555623,0.00024139455,0.00016006327,0.00024151494,0.00043933757,0.00022530397,0.00044955235,0.00113834],"category_scores_gemma":[0.00021264613,0.00025491163,0.00030666028,0.00009632628,0.0003204177,0.0002952925,0.00039259696,0.00060865516,0.00053356594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024067143,0.000011432176,0.00023769474,0.000021575881,0.000004048262,0.00013081574,0.000017103333,0.000031932366,0.9986412,0.00009980468,0.000021283819,0.00054239377],"study_design_scores_gemma":[0.00004560811,0.0002293824,0.014329334,0.000009797043,0.000022942144,0.0015512111,0.00014351524,0.0008408503,0.98124045,0.00015681011,0.00142244,0.0000076172073],"about_ca_topic_score_codex":0.0005628815,"about_ca_topic_score_gemma":0.00043035377,"teacher_disagreement_score":0.00113834,"about_ca_system_score_codex":0.00030554752,"about_ca_system_score_gemma":0.0002063294,"threshold_uncertainty_score":0.0038080812},"labels":[],"label_agreement":null},{"id":"W2064883964","doi":"10.1002/ar.a.20401","title":"Pulmonary intravascular monocytes/macrophages in a rat model of sepsis","year":2006,"lang":"en","type":"article","venue":"The Anatomical Record Part A Discoveries in Molecular Cellular and Evolutionary Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Sepsis; Saline; Lipopolysaccharide; Monocyte; Inflammation; Tumor necrosis factor alpha; Macrophage; Lung; Escherichia coli; Immunology; Internal medicine; Medicine; Microbiology; Endocrinology; Chemistry; Pharmacology; Biology; In vitro; Biochemistry","score_opus":0.006732761589539367,"score_gpt":0.21418854261513315,"score_spread":0.20745578102559378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064883964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99448025,0.0015113538,0.0024037552,0.00014594327,0.00006402032,0.00017580933,0.00028770854,0.00009982486,0.000831262],"genre_scores_gemma":[0.9865789,0.0021436403,0.0060683615,0.00022387019,0.000043891283,0.00058872806,0.000991821,0.00001931361,0.0033415658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996247,0.00010226197,0.000030935902,0.000059412927,0.00008659729,0.00009594519],"domain_scores_gemma":[0.99978954,0.000014242805,0.000064717926,0.000025466208,0.00002759,0.000078467405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038043904,0.0010045929,0.0006078714,0.00052750605,0.00025881108,0.00023711383,0.00024585493,0.00065864186,0.0010771455],"category_scores_gemma":[0.00014324074,0.00029933028,0.00036734014,0.00024635825,0.00034080635,0.0002220644,0.00029983322,0.0012536986,0.0006011311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025145062,0.00088257156,0.0011817842,0.00007572678,0.000013725673,0.0004389322,0.000044188946,0.00018798928,0.9911255,0.00010689632,0.00011097812,0.003317145],"study_design_scores_gemma":[0.0008126483,0.038805615,0.03577651,0.00007877783,0.00015983875,0.0036581436,0.00019915751,0.003821542,0.912396,0.00028360897,0.0039607803,0.00004737317],"about_ca_topic_score_codex":0.0003803531,"about_ca_topic_score_gemma":0.0005828175,"teacher_disagreement_score":0.0010771455,"about_ca_system_score_codex":0.00029791784,"about_ca_system_score_gemma":0.0003681905,"threshold_uncertainty_score":0.0036033988},"labels":[],"label_agreement":null},{"id":"W2065193095","doi":"10.1016/s0165-2427(02)00246-5","title":"Biological activity of immunostimulatory CpG DNA motifs in domestic animals","year":2003,"lang":"en","type":"review","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"CpG Oligodeoxynucleotide; CpG site; Innate immune system; Toll-Like Receptor 9; Biology; TLR9; Immune system; Immunology; Acquired immune system; Toll-like receptor; Pattern recognition receptor; DNA; Genetics; Gene; DNA methylation; Gene expression","score_opus":0.05149425361393376,"score_gpt":0.32138569760165964,"score_spread":0.26989144398772585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065193095","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000742252,0.9978102,0.00031294784,0.00008300735,0.00012577727,0.000003848168,0.000016707902,0.0000060747802,0.0008992734],"genre_scores_gemma":[0.0028995145,0.9949244,0.00044961207,0.0001583085,0.00020495182,0.000007446122,0.00005644846,0.0000016361482,0.0012975931],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998938,0.000013697177,0.00001637581,0.000027147817,0.00003809884,0.000010889672],"domain_scores_gemma":[0.99981254,0.00008011591,0.00004237875,0.0000062058416,0.000041946016,0.000016760472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004282807,0.00080689014,0.0012720374,0.0009759895,0.00016495043,0.00068198564,0.0008184871,0.00087511,0.0014969269],"category_scores_gemma":[0.00032579253,0.00022203305,0.00021363808,0.0012530008,0.000513633,0.0007553725,0.00034925045,0.00087324745,0.0011406721],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001670369,0.00006509906,0.0002967631,0.0087105865,0.000043772136,0.00036903803,0.000053116702,0.00043953056,0.024370966,0.0013629651,0.006031458,0.9580897],"study_design_scores_gemma":[0.000033575925,0.00032298476,0.0029173025,0.0017480518,0.00016396647,0.003611903,0.00012398872,0.00021066547,0.010601277,0.0016145952,0.9786229,0.000028697465],"about_ca_topic_score_codex":0.0008070051,"about_ca_topic_score_gemma":0.0011768221,"teacher_disagreement_score":0.0014969269,"about_ca_system_score_codex":0.00040411094,"about_ca_system_score_gemma":0.00048084007,"threshold_uncertainty_score":0.005007744},"labels":[],"label_agreement":null},{"id":"W2065654550","doi":"10.1073/pnas.1221655110","title":"Lymphocyte-derived ACh regulates local innate but not adaptive immunity","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":227,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Institute of General Medical Sciences","keywords":"Biology; Innate immune system; Cell biology; Immune system; Acetylcholine; Acquired immune system; Population; Immunology; Lymphocyte; Endocrinology; Medicine","score_opus":0.028271524321374485,"score_gpt":0.2600445645381868,"score_spread":0.23177304021681233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065654550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97892135,0.014046023,0.003061201,0.00024207328,0.0000660543,0.00001987832,0.000122648,0.00008720133,0.0034335456],"genre_scores_gemma":[0.99341935,0.002988879,0.0009433886,0.00006283625,0.000032746804,0.000015789297,0.00008991071,0.000012414476,0.0024347221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998356,0.000035598994,0.000010569348,0.000033335044,0.00003628496,0.000048585487],"domain_scores_gemma":[0.9999199,0.00001088462,0.000016340107,0.000009893975,0.000016187749,0.000026834203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013418439,0.00024219912,0.00023682327,0.00011888316,0.00013314384,0.00037353183,0.00017720701,0.00025535727,0.0011774802],"category_scores_gemma":[0.00012073619,0.00008493747,0.00017935003,0.00006789516,0.00023347774,0.0002490691,0.00024940606,0.0005284345,0.0004798501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011942139,0.000016541017,0.0003654859,0.00005281986,0.000003894805,0.000054751956,0.0000116289175,0.000018267308,0.99658126,0.0000725848,0.000030736534,0.0026725973],"study_design_scores_gemma":[0.000042784286,0.0007466792,0.0270991,0.000030858715,0.000037327012,0.00046515156,0.0001215832,0.0006653987,0.96657294,0.00017792561,0.004032902,0.000007379561],"about_ca_topic_score_codex":0.00026741423,"about_ca_topic_score_gemma":0.00056620396,"teacher_disagreement_score":0.0011774802,"about_ca_system_score_codex":0.00022336142,"about_ca_system_score_gemma":0.00013675023,"threshold_uncertainty_score":0.003939092},"labels":[],"label_agreement":null},{"id":"W2065847351","doi":"10.1016/j.mvr.2012.03.003","title":"Activated protein C improves pial microcirculation in experimental endotoxemia in rats","year":2012,"lang":"en","type":"article","venue":"Microvascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Microcirculation; Intravital microscopy; Extravasation; Proinflammatory cytokine; Cytokine; Tumor necrosis factor alpha; Sepsis; Medicine; Monocyte; Inflammation; Internal medicine; Lipopolysaccharide; Endocrinology; Immunology; Pharmacology","score_opus":0.03817013615007474,"score_gpt":0.33229642233326423,"score_spread":0.2941262861831895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065847351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99662256,0.0008224852,0.0014023078,0.00028595937,0.00012968553,0.000049780938,0.00014741687,0.00012416882,0.0004155392],"genre_scores_gemma":[0.99327916,0.0014167264,0.0017079719,0.0001504676,0.00010424952,0.00013247579,0.00033479475,0.000034586923,0.0028397152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997223,0.000042046842,0.00002012825,0.00005320204,0.000044295775,0.000117909345],"domain_scores_gemma":[0.9993925,0.00004686734,0.00015667475,0.00010344928,0.00005877691,0.00024179058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039228084,0.0014996513,0.0010111597,0.00072211586,0.00049651775,0.00041660963,0.00064285,0.00079841027,0.0016478694],"category_scores_gemma":[0.00048327725,0.00035260073,0.0005491103,0.00040204095,0.0011077854,0.00081271544,0.0003892352,0.002344341,0.00022516825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.04124683,0.0037341837,0.0008619689,0.00027489092,0.0000883256,0.0004263238,0.00013937478,0.00040187337,0.93945765,0.00042150365,0.00033230768,0.012614824],"study_design_scores_gemma":[0.001572487,0.021099895,0.010143705,0.000043455035,0.00032734164,0.00032537428,0.00020629884,0.0018460837,0.96206343,0.0004540815,0.0018734625,0.000044503322],"about_ca_topic_score_codex":0.0013637586,"about_ca_topic_score_gemma":0.0013781926,"teacher_disagreement_score":0.0016478694,"about_ca_system_score_codex":0.00050424895,"about_ca_system_score_gemma":0.001226299,"threshold_uncertainty_score":0.005512655},"labels":[],"label_agreement":null},{"id":"W2066106483","doi":"10.1016/j.vaccine.2004.01.059","title":"Intravaginal immunization with viral subunit protein plus CpG oligodeoxynucleotides induces protective immunity against HSV-2","year":2004,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; Health Sciences Centre","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"CpG Oligodeoxynucleotide; Immunology; Immunization; Adjuvant; Virology; Antigen; Immune system; Immunity; Medicine; Biology; Herpes simplex virus; Virus","score_opus":0.007085786935764215,"score_gpt":0.2102429990542029,"score_spread":0.20315721211843868,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066106483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99497247,0.0008916395,0.0017612169,0.00017482069,0.00017675798,0.00006995939,0.0001531339,0.00011069526,0.0016893378],"genre_scores_gemma":[0.9949279,0.0006058827,0.0012731843,0.00012064785,0.00006354597,0.00006915813,0.00023497542,0.000022895538,0.0026817946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962556,0.000057370544,0.000018827579,0.00007209362,0.0000716136,0.00015454472],"domain_scores_gemma":[0.99975103,0.00007626054,0.000040734398,0.000035133533,0.000018238234,0.000078520075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034005096,0.00066138344,0.0005838138,0.0004520019,0.0002595883,0.0005106131,0.00032942486,0.0007829731,0.0018418343],"category_scores_gemma":[0.00031589073,0.00035359294,0.0004025098,0.00015927128,0.0004849242,0.00036209854,0.00033028304,0.0019180477,0.00048247524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007817682,0.00034395405,0.00017112523,0.00005507155,0.000008882165,0.000045736364,0.00003000471,0.00009582754,0.99551815,0.00013103607,0.00007725615,0.002741275],"study_design_scores_gemma":[0.00026253637,0.0058239605,0.0036919585,0.000028464276,0.00006374293,0.0002732022,0.0001020589,0.001362089,0.9860573,0.00014374849,0.0021806166,0.000010355961],"about_ca_topic_score_codex":0.0009683098,"about_ca_topic_score_gemma":0.001672376,"teacher_disagreement_score":0.0018418343,"about_ca_system_score_codex":0.00042345445,"about_ca_system_score_gemma":0.00065312895,"threshold_uncertainty_score":0.0061615705},"labels":[],"label_agreement":null},{"id":"W2066129368","doi":"10.1016/s0003-9969(01)00038-3","title":"Tissue specificity of lymphocyte migration into sheep gingival tissue","year":2001,"lang":"en","type":"article","venue":"Archives of Oral Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of New Brunswick; University of Toronto","funders":"Medical Research Council","keywords":"Pathology; Lymphocyte; Lymph; Lymphatic system; Inflammation; Subcutaneous tissue; Antigen; Soft tissue; Necrosis; Medicine; Chemistry; Immunology","score_opus":0.011899483362719928,"score_gpt":0.26548063606681593,"score_spread":0.253581152704096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066129368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878762,0.0025894449,0.0024272401,0.00008365385,0.00003756813,0.000054514396,0.00013099554,0.000046662888,0.006753731],"genre_scores_gemma":[0.9941554,0.0007145004,0.001145761,0.0000572992,0.000031644166,0.000068834626,0.00024511517,0.000024014795,0.0035573847],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997273,0.00007189758,0.000021642525,0.000050802562,0.000026320504,0.00010190756],"domain_scores_gemma":[0.99956983,0.00023666186,0.00003206929,0.00005698462,0.000042069067,0.0000624018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045426417,0.00034619056,0.00034234516,0.00047916727,0.00023357928,0.00048814088,0.00031031747,0.00053524587,0.003364783],"category_scores_gemma":[0.00044092812,0.00031666688,0.0003243978,0.00015414451,0.00028584123,0.00038004102,0.00041147866,0.0010399726,0.0014663475],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014137077,0.000053418396,0.0011495061,0.000129027,0.0000073906845,0.00032665615,0.00013803187,0.000049323204,0.99253535,0.0006099203,0.00006583999,0.0035219262],"study_design_scores_gemma":[0.00013190831,0.0023798982,0.03884384,0.000095279654,0.00007131674,0.0021762932,0.0008653229,0.0016423339,0.9479948,0.00058805186,0.005194114,0.000016818756],"about_ca_topic_score_codex":0.00045669687,"about_ca_topic_score_gemma":0.00066923816,"teacher_disagreement_score":0.003364783,"about_ca_system_score_codex":0.00022698406,"about_ca_system_score_gemma":0.00016134152,"threshold_uncertainty_score":0.011256278},"labels":[],"label_agreement":null},{"id":"W2066196230","doi":"10.1096/fj.02-0950fje","title":"Bacterial DNA evokes epithelial IL‐8 production by a MAPK‐dependent, NFκB‐independent pathway","year":2003,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"AstraZeneca Canada","keywords":"NF-κB; MAPK/ERK pathway; Cell biology; Chemistry; Signal transduction; Biology","score_opus":0.009176597643728652,"score_gpt":0.2083218565828317,"score_spread":0.19914525893910304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066196230","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946596,0.0014563138,0.0021910553,0.00011594407,0.00005174447,0.00004889322,0.00035640952,0.00006460864,0.001055562],"genre_scores_gemma":[0.9946156,0.0008426822,0.0019050323,0.00008198777,0.000025567331,0.000059563175,0.0004237454,0.000010260533,0.0020354644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978524,0.00005132894,0.000016497484,0.000029279281,0.000056390807,0.00006128828],"domain_scores_gemma":[0.99986434,0.00003157267,0.00003377302,0.00001656537,0.000023410674,0.000030439596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121068784,0.00045511476,0.00023871576,0.00022754744,0.00009236193,0.00023411596,0.000100592195,0.00029694266,0.0021051401],"category_scores_gemma":[0.00014411207,0.0001912217,0.0003606662,0.00010702392,0.00018456815,0.00021158616,0.00020532557,0.0005492582,0.00056245277],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010627288,0.000024734658,0.000071862916,0.000046665642,0.0000015854224,0.00003411541,0.000008276299,0.000009883757,0.99938834,0.000008092315,0.000010786312,0.0002894289],"study_design_scores_gemma":[0.000024686111,0.00091501925,0.009249751,0.000021287862,0.000012753371,0.0002764567,0.000088820474,0.00064266217,0.9878582,0.00004416289,0.00086155935,0.0000046512732],"about_ca_topic_score_codex":0.00020786388,"about_ca_topic_score_gemma":0.00023484431,"teacher_disagreement_score":0.0021051401,"about_ca_system_score_codex":0.0001516651,"about_ca_system_score_gemma":0.00017141113,"threshold_uncertainty_score":0.007042408},"labels":[],"label_agreement":null},{"id":"W2066285673","doi":"10.1016/j.clim.2005.01.014","title":"IL-17R activation of human airway smooth muscle cells induces CXCL-8 production via a transcriptional-dependent mechanism","year":2005,"lang":"en","type":"article","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research; Manitoba Health Research Council","keywords":"Chemokine; Neutrophilia; Cell biology; Interleukin 8; Messenger RNA; Biology; Molecular biology; Cytokine; Chemistry; Immunology; Inflammation; Gene","score_opus":0.033219773262233056,"score_gpt":0.3005905426335796,"score_spread":0.2673707693713465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066285673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921904,0.0022234998,0.0018650955,0.00052392844,0.00012658986,0.00007176043,0.0005939463,0.000076022516,0.0023287605],"genre_scores_gemma":[0.9915386,0.0012352611,0.0017081086,0.00021088403,0.00011600231,0.00013678937,0.0014340715,0.000024707435,0.003595665],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993793,0.00017161797,0.00004511846,0.0000588183,0.00011402474,0.0002311395],"domain_scores_gemma":[0.999728,0.000082463666,0.000040956696,0.00005262411,0.00004961071,0.00004629641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042540944,0.0003555552,0.0004143718,0.00030393855,0.00025468762,0.00050703017,0.00016380718,0.00026254577,0.0045691105],"category_scores_gemma":[0.00038707684,0.0002786461,0.0006558966,0.00018178484,0.00034242644,0.00024197614,0.0003965094,0.0009824398,0.0014821853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007085771,0.00015793809,0.0012812731,0.000084819694,0.000012687639,0.00023882628,0.00006817593,0.000061101426,0.9941607,0.00013751874,0.00024336028,0.0028449176],"study_design_scores_gemma":[0.00026138304,0.0012285443,0.03950602,0.000051018545,0.000048345697,0.0010223252,0.00029717127,0.0013595225,0.9504218,0.00017615345,0.0056167147,0.000010963719],"about_ca_topic_score_codex":0.0004470207,"about_ca_topic_score_gemma":0.00057574105,"teacher_disagreement_score":0.0045691105,"about_ca_system_score_codex":0.0002889021,"about_ca_system_score_gemma":0.00035588923,"threshold_uncertainty_score":0.015285194},"labels":[],"label_agreement":null},{"id":"W2066381235","doi":"10.1002/ibd.21097","title":"TLR5 is not required for flagellin-mediated exacerbation of DSS colitis","year":2009,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"TLR5; Flagellin; Colitis; Inflammatory bowel disease; Immunology; Ulcerative colitis; Antigen; Exacerbation; Microbiology; Medicine; Innate immune system; Immune system; Biology; Toll-like receptor; Receptor; Internal medicine; Disease","score_opus":0.012128644558676384,"score_gpt":0.2427880459018306,"score_spread":0.2306594013431542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066381235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99595237,0.0012637996,0.0011002612,0.0001231898,0.0000367964,0.000023508584,0.00058240595,0.00006670723,0.0008509066],"genre_scores_gemma":[0.9965982,0.00025378398,0.0008791722,0.00009541026,0.000009244909,0.00003194049,0.001064586,0.000021412889,0.0010463245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996208,0.000057544687,0.00005703608,0.00006564524,0.000095393734,0.00010347409],"domain_scores_gemma":[0.9991922,0.00008966954,0.00031383676,0.00007229289,0.00005011839,0.000281897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023455029,0.00036011907,0.0003586279,0.00029395212,0.0002041901,0.00038718389,0.00048367868,0.00062852784,0.0026498868],"category_scores_gemma":[0.0002690194,0.00022197548,0.0004505079,0.0001363891,0.00041256897,0.00024899075,0.00033581353,0.00087873667,0.0008364533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039633087,0.000061220846,0.0007576142,0.000061383726,0.00000882001,0.00015185462,0.000010900902,0.000037011974,0.99793977,0.0000778046,0.000044659995,0.0004526681],"study_design_scores_gemma":[0.00016909794,0.0010466583,0.058388483,0.00005804665,0.00006134012,0.0022917998,0.00016851292,0.0020737664,0.9317803,0.00013160547,0.0038096544,0.00002087339],"about_ca_topic_score_codex":0.0007232191,"about_ca_topic_score_gemma":0.00096950855,"teacher_disagreement_score":0.0026498868,"about_ca_system_score_codex":0.00047946378,"about_ca_system_score_gemma":0.00038418037,"threshold_uncertainty_score":0.008864701},"labels":[],"label_agreement":null},{"id":"W2066445793","doi":"10.1164/rccm.201001-0075oc","title":"Role for Myeloid Nuclear Differentiation Antigen in the Regulation of Neutrophil Apoptosis during Sepsis","year":2010,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Sepsis; Myeloid cells; Immunology; Myeloid; Apoptosis; Cell biology; Cancer research; Genetics; Biology","score_opus":0.007737648231676089,"score_gpt":0.25705074113848936,"score_spread":0.24931309290681328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066445793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96097994,0.030216489,0.0061898385,0.00054063956,0.0000948638,0.00011412308,0.00025417414,0.000082642146,0.0015273418],"genre_scores_gemma":[0.9952142,0.0028827603,0.001183025,0.00007127453,0.000021316939,0.000036138397,0.00012708627,0.0000040031537,0.00046009762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997924,0.00006352442,0.00002519197,0.0000324313,0.000049917173,0.00003655566],"domain_scores_gemma":[0.9997029,0.00003798223,0.00012696898,0.000019940468,0.000051906245,0.000060328523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032966677,0.00031807536,0.00020843843,0.00021991311,0.00013711634,0.0003044121,0.00017657719,0.00025289753,0.0006485874],"category_scores_gemma":[0.00047987895,0.00007486493,0.00014632214,0.00012641044,0.00037061246,0.00024845384,0.00042088045,0.00041877036,0.00020615813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001504185,0.00008832841,0.011237213,0.00051846274,0.000018303337,0.00071078696,0.000111021334,0.0002893993,0.9659769,0.0007530819,0.0002092322,0.018583128],"study_design_scores_gemma":[0.0003079161,0.0040935082,0.21572906,0.00036056436,0.0001663452,0.0071431655,0.00057116715,0.006921456,0.74189717,0.0018022305,0.02096671,0.000040663923],"about_ca_topic_score_codex":0.00014247642,"about_ca_topic_score_gemma":0.00015896648,"teacher_disagreement_score":0.0006485874,"about_ca_system_score_codex":0.00033957395,"about_ca_system_score_gemma":0.00032326847,"threshold_uncertainty_score":0.002463758},"labels":[],"label_agreement":null},{"id":"W2066542834","doi":"10.1016/j.vaccine.2008.03.024","title":"Innate inflammatory responses to the Gram-positive bacterium Lactococcus lactis","year":2008,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"U.S. Food and Drug Administration","keywords":"Lactococcus lactis; Microbiology; Proinflammatory cytokine; Bacteria; Biology; Chemokine; Pathogenic bacteria; Escherichia coli; Salmonella; Immunology; Inflammation; Lactic acid; Gene","score_opus":0.011134701541219441,"score_gpt":0.23047589407113575,"score_spread":0.2193411925299163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066542834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96597165,0.026143918,0.0013902901,0.002112349,0.00042686393,0.00004942407,0.00007349718,0.00003311631,0.0037989262],"genre_scores_gemma":[0.987473,0.007284825,0.00071759586,0.00042274024,0.00023441331,0.000037144546,0.00011914854,0.000003340765,0.0037077903],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997851,0.00007128506,0.000008616906,0.000015966336,0.000045419878,0.00007368725],"domain_scores_gemma":[0.99982387,0.000039891944,0.00005188748,0.00000881678,0.000023258825,0.000052338946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033520916,0.00043363398,0.00032041676,0.00021965454,0.0001563184,0.00042293483,0.000104497834,0.000400638,0.002079849],"category_scores_gemma":[0.0004074418,0.00007586214,0.00014805487,0.000072751376,0.00035130678,0.0002835531,0.00038750068,0.0009387392,0.00027983775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002335755,0.00073939475,0.0025560185,0.00059848954,0.000025283367,0.00073141925,0.00015534373,0.00053997396,0.9410312,0.0016483298,0.0013606102,0.04827815],"study_design_scores_gemma":[0.0005931288,0.019053709,0.04982072,0.0005094344,0.00016919467,0.0032470336,0.0014068375,0.004352215,0.87482804,0.004854795,0.041109487,0.00005548872],"about_ca_topic_score_codex":0.0002599903,"about_ca_topic_score_gemma":0.00047669918,"teacher_disagreement_score":0.002079849,"about_ca_system_score_codex":0.00039050332,"about_ca_system_score_gemma":0.00040646555,"threshold_uncertainty_score":0.0069577694},"labels":[],"label_agreement":null},{"id":"W2066719210","doi":"10.1038/ni.2023","title":"An unexpected role for MHC class II","year":2011,"lang":"en","type":"letter","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Major histocompatibility complex; Cell biology; MHC class II; MHC class I; CD74; Biology; Signal transduction; Function (biology); Antigen presentation; CD8; Intracellular; Antigen processing; Immunology; Antigen; T cell; Immune system","score_opus":0.006534628546297705,"score_gpt":0.23539465273219143,"score_spread":0.2288600241858937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066719210","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012247965,0.023543261,0.002299383,0.8581158,0.08605245,0.0000300957,0.00013762392,0.00030249788,0.017270913],"genre_scores_gemma":[0.20799874,0.023823611,0.0042782906,0.5684872,0.15368162,0.00015605474,0.00021374148,0.000114246155,0.041246552],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996475,0.00007750414,0.00002514464,0.000061687584,0.00011238168,0.000075804695],"domain_scores_gemma":[0.9989525,0.00060896,0.000050717175,0.00009881412,0.00013204027,0.00015693411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000942141,0.00048087168,0.000535216,0.00019644246,0.0010047307,0.0016470804,0.0007578474,0.00707464,0.002730594],"category_scores_gemma":[0.0025201126,0.0002057687,0.0003432159,0.00014311624,0.0015931543,0.0014085452,0.00082429557,0.010755168,0.0013873066],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011476963,0.00010003385,0.0012788699,0.00046622992,0.000050135335,0.016294904,0.00021877092,0.00021645386,0.020368716,0.028936114,0.8670397,0.06388238],"study_design_scores_gemma":[0.00032524165,0.00017740951,0.0016038403,0.000111600704,0.00006104004,0.010532791,0.00023038575,0.0012946631,0.008725085,0.028307768,0.9485803,0.000049888553],"about_ca_topic_score_codex":0.00026040408,"about_ca_topic_score_gemma":0.0004563509,"teacher_disagreement_score":0.00707464,"about_ca_system_score_codex":0.0008796678,"about_ca_system_score_gemma":0.00048454484,"threshold_uncertainty_score":0.009134769},"labels":[],"label_agreement":null},{"id":"W2066730813","doi":"10.1074/jbc.m111.237578","title":"Neu1 Sialidase and Matrix Metalloproteinase-9 Cross-talk Is Essential for Toll-like Receptor Activation and Cellular Signaling","year":2011,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Vlaamse regering; Universiteit Gent; Natural Sciences and Engineering Research Council of Canada; Queen's University","keywords":"Cell biology; Signal transduction; TLR4; Toll-like receptor; Chemistry; Receptor; Biology; Biochemistry; Innate immune system","score_opus":0.023344930342634566,"score_gpt":0.2586773203100009,"score_spread":0.23533238996736633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066730813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93758327,0.032112427,0.02052685,0.0009645604,0.0002724805,0.00012869804,0.00088216946,0.0003177631,0.007211785],"genre_scores_gemma":[0.9816213,0.007034625,0.0060111373,0.00019695892,0.00007683567,0.000073657015,0.00072932406,0.00002585353,0.004230241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996026,0.000053460895,0.000029745652,0.00008670495,0.00011771704,0.00010976966],"domain_scores_gemma":[0.9998323,0.000011937829,0.000073142306,0.000012305882,0.000024037838,0.000046206307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000237869,0.00073754665,0.00035130043,0.00022028791,0.00032794647,0.00063004135,0.00021743825,0.000577661,0.0014852795],"category_scores_gemma":[0.00019129117,0.00022485072,0.00043298528,0.00015884647,0.0003012573,0.00048701823,0.0006800752,0.0007332996,0.00079698086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114146125,0.000018940716,0.00052540423,0.00009098152,0.000011166777,0.00027262242,0.000019175903,0.00006533229,0.99483347,0.0006834951,0.00009052982,0.0032748387],"study_design_scores_gemma":[0.0000258739,0.00027470602,0.013878516,0.00003288483,0.000026140026,0.0018796405,0.00008381833,0.0015564433,0.9701221,0.0009120351,0.011189753,0.000018080784],"about_ca_topic_score_codex":0.00029441123,"about_ca_topic_score_gemma":0.00031827646,"teacher_disagreement_score":0.0014852795,"about_ca_system_score_codex":0.00055186264,"about_ca_system_score_gemma":0.00038681494,"threshold_uncertainty_score":0.0049687624},"labels":[],"label_agreement":null},{"id":"W2066892212","doi":"10.1159/000049504","title":"A Th1-Inducing Adjuvant, MPL&lt;sup&gt;®&lt;/sup&gt;, Enhances Antibody Profiles in Experimental Animals Suggesting It Has the Potential to Improve the Efficacy of Allergy Vaccines","year":2001,"lang":"en","type":"article","venue":"International Archives of Allergy and Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Adjuvant; Antigen; Immunology; Keyhole limpet hemocyanin; Antibody; Immunoglobulin E; Medicine","score_opus":0.009794015085430922,"score_gpt":0.26072612690590524,"score_spread":0.2509321118204743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2066892212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97853523,0.0055155363,0.0077418243,0.00067253376,0.00031643698,0.0003120202,0.0010873338,0.0006347336,0.0051843156],"genre_scores_gemma":[0.96627164,0.004455002,0.014199072,0.0002780364,0.0003517939,0.00036776307,0.0013636505,0.00016493043,0.012548049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972516,0.000055650078,0.00002223507,0.000054609576,0.00007610962,0.000066174274],"domain_scores_gemma":[0.999511,0.00010209053,0.00014687696,0.000039628332,0.000062137784,0.00013811913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005660974,0.0013078524,0.00056890305,0.0011192582,0.000221097,0.00036540098,0.00035556927,0.0007020101,0.003283047],"category_scores_gemma":[0.00020434805,0.00028197895,0.00049788406,0.00025557136,0.00041892286,0.00043117336,0.00020746529,0.0017972257,0.001124533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047236244,0.00041122304,0.00010248556,0.0001358525,0.0000044534427,0.00003851651,0.000011613119,0.000068169255,0.9965,0.00005442754,0.00008006063,0.002121011],"study_design_scores_gemma":[0.0001781779,0.005277,0.0014067851,0.000032342417,0.00003117226,0.00016645332,0.000009002604,0.0004577755,0.9900058,0.000045509754,0.002384882,0.000005138048],"about_ca_topic_score_codex":0.00032007392,"about_ca_topic_score_gemma":0.00060369156,"teacher_disagreement_score":0.003283047,"about_ca_system_score_codex":0.00033015147,"about_ca_system_score_gemma":0.00042896098,"threshold_uncertainty_score":0.010982931},"labels":[],"label_agreement":null},{"id":"W2067150920","doi":"10.1038/sj.bjp.0704715","title":"IL‐1β signalling in glial cells in wildtype and IL‐1RI deficient mice","year":2002,"lang":"en","type":"article","venue":"British Journal of Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute","funders":"","keywords":"p38 mitogen-activated protein kinases; Cell biology; Signal transduction; MAPK/ERK pathway; Receptor; Biology; Kinase; Inflammation; Microglia; Neuroglia; Neurodegeneration; Mitogen-activated protein kinase; Neuroscience; Internal medicine; Immunology; Central nervous system; Biochemistry; Medicine","score_opus":0.0114969110726102,"score_gpt":0.2378585962818837,"score_spread":0.2263616852092735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067150920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98615485,0.0046155653,0.0030968827,0.0003944261,0.00013802784,0.00008078151,0.0028057243,0.0003331238,0.0023805844],"genre_scores_gemma":[0.96605456,0.0058613783,0.009243658,0.00046572124,0.00008334781,0.00045644626,0.0038499914,0.00039092402,0.013593863],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993001,0.00006475297,0.00008926353,0.0002185519,0.0001915081,0.00013582145],"domain_scores_gemma":[0.99941385,0.00003870267,0.00025718776,0.00005398805,0.000035517663,0.00020073271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030668077,0.0013590559,0.0006128428,0.0016756449,0.0005122762,0.0008217264,0.00075734884,0.0013790776,0.0027983922],"category_scores_gemma":[0.0002573836,0.00072764605,0.0007573056,0.0004608213,0.00094172015,0.00064616016,0.00047883304,0.0018767741,0.0013682676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043766949,0.000057371813,0.00015993009,0.000045420948,0.000010606829,0.00019545566,0.00004393944,0.000047131507,0.9979893,0.00021482518,0.000059574068,0.0007388702],"study_design_scores_gemma":[0.00053622585,0.0020428842,0.028873201,0.0001806659,0.00022415252,0.005786662,0.00046273344,0.0015745318,0.94906014,0.0011338366,0.010058416,0.0000665355],"about_ca_topic_score_codex":0.00091187574,"about_ca_topic_score_gemma":0.0014679974,"teacher_disagreement_score":0.0027983922,"about_ca_system_score_codex":0.00066129526,"about_ca_system_score_gemma":0.00038528084,"threshold_uncertainty_score":0.0093615055},"labels":[],"label_agreement":null},{"id":"W2067193667","doi":"10.4049/jimmunol.169.12.7026","title":"Hydrogen Peroxide Induces Murine Macrophage Chemokine Gene Transcription Via Extracellular Signal-Regulated Kinase- and Cyclic Adenosine 5′-Monophosphate (cAMP)-Dependent Pathways: Involvement of NF-κB, Activator Protein 1, and cAMP Response Element Binding Protein","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"CREB; Chemokine; Cell biology; Protein kinase A; MAPK/ERK pathway; Molecular biology; Chemistry; Signal transduction; Biology; Transcription factor; Kinase; Biochemistry; Receptor","score_opus":0.014161804846918152,"score_gpt":0.1989751075511568,"score_spread":0.18481330270423865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067193667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99174607,0.0049932124,0.0015691131,0.000118379336,0.000061040286,0.000055466877,0.0003203551,0.00007059342,0.0010657525],"genre_scores_gemma":[0.989489,0.003253886,0.0025347585,0.00014006718,0.000054503405,0.00015712086,0.0008316046,0.00001963603,0.0035194207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986696,0.00002237962,0.0000072578487,0.000021296413,0.000029349052,0.00005275419],"domain_scores_gemma":[0.99990916,0.000013647357,0.000029210503,0.000007801835,0.000012033922,0.000028134014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001701767,0.0005877707,0.00026208235,0.00023315675,0.0001288564,0.00020525353,0.00013127379,0.00023362895,0.0013859035],"category_scores_gemma":[0.0000759895,0.00018243809,0.00030555917,0.00013204575,0.00024916884,0.00017430534,0.00017400461,0.00037860972,0.00030710033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002177055,0.000041106734,0.00010352738,0.00005175972,0.0000037344519,0.000031177813,0.00001144162,0.000011846465,0.9989078,0.000020953023,0.000026255251,0.00057269924],"study_design_scores_gemma":[0.000075398784,0.0013859253,0.012840477,0.00001421336,0.000029277537,0.00027851842,0.00004632315,0.00045775506,0.98213357,0.000082139784,0.0026471592,0.00000920233],"about_ca_topic_score_codex":0.00044420204,"about_ca_topic_score_gemma":0.0009321496,"teacher_disagreement_score":0.0013859035,"about_ca_system_score_codex":0.0002708686,"about_ca_system_score_gemma":0.00017568795,"threshold_uncertainty_score":0.0046362877},"labels":[],"label_agreement":null},{"id":"W2067372178","doi":"10.1007/s00005-008-0008-3","title":"Neutrophil recognition of bacterial DNA and Toll-like receptor 9-dependent and -independent regulation of neutrophil function","year":2008,"lang":"en","type":"review","venue":"Archivum Immunologiae et Therapiae Experimentalis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Cell biology; TLR9; Pattern recognition receptor; Biology; TLR3; Innate immune system; Toll-Like Receptor 9; Chemokine; TLR4; Signal transduction; Toll-like receptor; Chemotaxis; Receptor; Gene expression; Gene; Biochemistry","score_opus":0.027024249787250675,"score_gpt":0.26943977465306074,"score_spread":0.24241552486581006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067372178","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002584113,0.9976374,0.00021742657,0.00023578618,0.00028024582,0.000005676485,0.00001463825,0.000010696446,0.0013396168],"genre_scores_gemma":[0.0011999902,0.9967781,0.00020972305,0.00014304693,0.00023137023,0.000011175094,0.00003872611,0.0000014184981,0.0013864737],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984956,0.000022725559,0.000022093394,0.00003162096,0.00005816151,0.000015889482],"domain_scores_gemma":[0.9998166,0.00004931259,0.000034070155,0.000008130818,0.0000577507,0.00003403495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036545252,0.0009814061,0.0011224321,0.001171914,0.00022147635,0.0006908285,0.0009436893,0.0008582412,0.0027327414],"category_scores_gemma":[0.00039927705,0.0002524658,0.00022657281,0.0012340371,0.0005881024,0.001392679,0.000488724,0.0011952098,0.0037516209],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014573053,0.00007205445,0.00019961923,0.006668748,0.00004000556,0.00029459188,0.000040176845,0.00024950525,0.0073436447,0.0033917977,0.0282556,0.95329845],"study_design_scores_gemma":[0.000035653455,0.00012409803,0.0016563212,0.0009810056,0.000040622384,0.002269093,0.000044313125,0.00008548668,0.0019023239,0.001738898,0.99110436,0.000017794617],"about_ca_topic_score_codex":0.0004931916,"about_ca_topic_score_gemma":0.0008091002,"teacher_disagreement_score":0.0027327414,"about_ca_system_score_codex":0.00056752306,"about_ca_system_score_gemma":0.000634513,"threshold_uncertainty_score":0.009141982},"labels":[],"label_agreement":null},{"id":"W2067576016","doi":"10.2174/138955708784534481","title":"Activation and Regulation of Toll-like Receptor 9: CpGs and Beyond","year":2008,"lang":"en","type":"review","venue":"Mini-Reviews in Medicinal Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Nucleic acid; TLR9; Toll-Like Receptor 9; Biology; Innate immune system; CpG site; DNA; Receptor; Biochemistry; DNA methylation; Cell biology; Computational biology; Gene; Gene expression","score_opus":0.023880568033202678,"score_gpt":0.29130557303020865,"score_spread":0.267425004997006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067576016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005074815,0.9887798,0.0019139935,0.00076444534,0.0006037897,0.0000139613985,0.000101308826,0.000038492963,0.0027094048],"genre_scores_gemma":[0.029759547,0.9624864,0.0017539957,0.0009146439,0.0008095534,0.00003639658,0.0001919719,0.000012909744,0.004034567],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99982697,0.000028373683,0.000026162006,0.000047139016,0.00004315163,0.000028191218],"domain_scores_gemma":[0.99989045,0.000029569048,0.00003445636,0.0000043170076,0.000025334064,0.000015836109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022842825,0.00049998023,0.00062628044,0.00040794763,0.0001696665,0.00073654007,0.0005048905,0.0007563388,0.0018393805],"category_scores_gemma":[0.00026695544,0.00013934399,0.00024687697,0.0005164982,0.00037617428,0.00092600496,0.0004274468,0.00081034325,0.001069193],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041835988,0.00010676852,0.0008142275,0.032525647,0.000107614236,0.0014854907,0.0005738657,0.0010772066,0.35164094,0.033896502,0.012504981,0.5648484],"study_design_scores_gemma":[0.00001676071,0.00034437503,0.0054985383,0.0022120788,0.00009884837,0.0044319048,0.00026939358,0.00043057514,0.066405684,0.009114584,0.91110665,0.00007072598],"about_ca_topic_score_codex":0.0003958298,"about_ca_topic_score_gemma":0.00034358108,"teacher_disagreement_score":0.0018393805,"about_ca_system_score_codex":0.00041640556,"about_ca_system_score_gemma":0.0006417505,"threshold_uncertainty_score":0.0061532855},"labels":[],"label_agreement":null},{"id":"W2067634022","doi":"10.1186/1471-2466-9-46","title":"Association of the TLR4 Asp299Gly polymorphism with lung function in relation to body mass index","year":2009,"lang":"en","type":"article","venue":"BMC Pulmonary Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; Canadian Institute for Public Safety Research and Treatment; University of Ottawa; Saskatchewan Health Authority; Canadian Science Centre for Human and Animal Health","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Medicine; Body mass index; Lung function; Lung; Internal medicine","score_opus":0.0059389611743364415,"score_gpt":0.2148319723644659,"score_spread":0.20889301119012946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067634022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99902654,0.00024117659,0.00008791725,0.00005826291,0.000007764255,0.000004469659,0.00026807355,0.00000466453,0.0003012434],"genre_scores_gemma":[0.9992582,0.00007647408,0.00012009224,0.000025966765,0.000013453945,0.0000057762145,0.0002733546,0.0000023874015,0.000224229],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99975103,0.000072571915,0.000023144774,0.000055115997,0.00005088387,0.000047243622],"domain_scores_gemma":[0.99883693,0.00034397858,0.0003702182,0.00008181241,0.00014643605,0.00022064064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005620782,0.0002615322,0.00025904115,0.0004870507,0.00025670743,0.00038773072,0.0003319536,0.00052128365,0.0021377495],"category_scores_gemma":[0.0016097318,0.00016799184,0.0002508075,0.00055743067,0.00026657723,0.00013874802,0.00020863606,0.000557866,0.00035499875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022736505,0.000024915182,0.99847966,0.0000038920707,0.00005153922,0.00006204953,0.000011507205,0.000031354077,0.0005119956,0.0000055311257,0.00004734744,0.0005427052],"study_design_scores_gemma":[0.000005906242,0.000062914296,0.99940085,0.000001972524,0.00002327969,0.00020869463,0.000016469767,0.00015474975,0.00005998351,0.000009363897,0.000054602693,0.0000013608344],"about_ca_topic_score_codex":0.0070985863,"about_ca_topic_score_gemma":0.0050512394,"teacher_disagreement_score":0.0070985863,"about_ca_system_score_codex":0.00020738915,"about_ca_system_score_gemma":0.0002586431,"threshold_uncertainty_score":0.014114559},"labels":[],"label_agreement":null},{"id":"W2067834379","doi":"10.1165/rcmb.2003-0312oc","title":"Monocyte Recruitment into the Lungs in Pneumococcal Pneumonia","year":2003,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Pneumonia; Monocyte; Lung; Bone marrow; Immunology; Pathology; Medicine; Biology; Internal medicine","score_opus":0.011665704327346564,"score_gpt":0.2675568128356372,"score_spread":0.25589110850829067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2067834379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941506,0.0042336476,0.00096717203,0.000060189566,0.00002081441,0.000011547704,0.00003305636,0.000019548575,0.00050333835],"genre_scores_gemma":[0.9949856,0.0021415686,0.0010240102,0.000070348426,0.000028092138,0.000026220208,0.00008776194,0.0000048619495,0.0016316544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987125,0.000040037066,0.000011966473,0.000015420228,0.000027974378,0.00003336002],"domain_scores_gemma":[0.9998852,0.000019908264,0.00002863137,0.000011171701,0.00001748959,0.000037610433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002191067,0.00018058778,0.00031235188,0.00020149924,0.00017395949,0.00028471168,0.00008754916,0.00031694173,0.00058952085],"category_scores_gemma":[0.00021666964,0.00016130692,0.00010324103,0.00011594322,0.00021086699,0.00014060568,0.0002442165,0.0004228413,0.0002857042],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006295343,0.000040474297,0.005613606,0.00007873664,0.0000041460935,0.0007040848,0.00011696468,0.00005070508,0.98544145,0.00018754718,0.00009881855,0.007033932],"study_design_scores_gemma":[0.00014791751,0.0026895492,0.20414533,0.00008669985,0.0000741142,0.009796062,0.00042913892,0.0016939247,0.77186704,0.00065249146,0.008393668,0.000024065235],"about_ca_topic_score_codex":0.0003154468,"about_ca_topic_score_gemma":0.00044735786,"teacher_disagreement_score":0.00058952085,"about_ca_system_score_codex":0.00018953587,"about_ca_system_score_gemma":0.00016424902,"threshold_uncertainty_score":0.0019721389},"labels":[],"label_agreement":null},{"id":"W2068156832","doi":"10.2353/ajpath.2006.051155","title":"Severe Sepsis Exacerbates Cell-Mediated Immunity in the Lung Due to an Altered Dendritic Cell Cytokine Profile","year":2006,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Immune system; Immunology; Schistosoma mansoni; Cytokine; Biology; Lung; Sepsis; Granuloma; Dendritic cell; Immunity; Cellular immunity; Medicine; Internal medicine; Schistosomiasis","score_opus":0.005678857761243786,"score_gpt":0.23060861311477587,"score_spread":0.2249297553535321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068156832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957747,0.0023857052,0.0006643598,0.0003071844,0.00006162054,0.000020647916,0.00012894331,0.000031571144,0.0006253699],"genre_scores_gemma":[0.9978605,0.0008706626,0.00042338198,0.00014635248,0.00008461948,0.000018851004,0.00012735142,0.000008097802,0.00046021762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996264,0.00010597115,0.00003739087,0.000038459642,0.00009402869,0.00009767362],"domain_scores_gemma":[0.9994599,0.000050344544,0.00018303667,0.000050230403,0.00005396177,0.00020247718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036143963,0.00052238564,0.0005310382,0.00036072845,0.00021653684,0.000431137,0.00013909944,0.00047387733,0.0010700424],"category_scores_gemma":[0.00043352426,0.0002757367,0.00030545198,0.00016763996,0.00041030627,0.00031483814,0.0004355502,0.001251135,0.00033396197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026318962,0.00009676306,0.0050020316,0.000100531346,0.000019893412,0.0012862437,0.000035383913,0.000111064,0.98670816,0.00012533659,0.00022524086,0.0036575685],"study_design_scores_gemma":[0.00087147614,0.0069082296,0.60270745,0.000113248214,0.00028352463,0.016839806,0.0006798976,0.0032723225,0.3615417,0.001655391,0.005049789,0.000077267105],"about_ca_topic_score_codex":0.00013108354,"about_ca_topic_score_gemma":0.00018009153,"teacher_disagreement_score":0.0010700424,"about_ca_system_score_codex":0.0002468666,"about_ca_system_score_gemma":0.000308918,"threshold_uncertainty_score":0.0035796762},"labels":[],"label_agreement":null},{"id":"W2068428724","doi":"10.1046/j.1365-2982.2001.00294.x","title":"The tripeptide feG reduces endotoxin‐provoked perturbation of intestinal motility and inflammation","year":2001,"lang":"en","type":"article","venue":"Neurogastroenterology & Motility","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council; Research Services, University of Calgary; University of Calgary","keywords":"Lipopolysaccharide; Extravasation; Inflammation; Chemistry; Motility; Tripeptide; Endocrinology; Internal medicine; Intestinal motility; CD18; Integrin alpha M; Peptide; Medicine; Immunology; Biology; Biochemistry; Cell biology; Receptor","score_opus":0.0094444285322222,"score_gpt":0.22220109072840888,"score_spread":0.2127566621961867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068428724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99878925,0.00053154974,0.00029687752,0.000047097947,0.000010916468,0.000010203584,0.000035604837,0.000024645657,0.0002538689],"genre_scores_gemma":[0.9975534,0.0005559733,0.00075370003,0.00005495851,0.000014063147,0.000018566896,0.0001408995,0.000010078619,0.0008984283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999424,0.000013767923,0.0000047006697,0.0000068677746,0.000010590204,0.00002170649],"domain_scores_gemma":[0.9999019,0.000010385019,0.000033061107,0.00000652572,0.000006678148,0.00004149332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006961976,0.00030366745,0.0002686234,0.00014981754,0.00007968289,0.00012042872,0.000115576964,0.00030192296,0.00080089935],"category_scores_gemma":[0.00014687261,0.000090514346,0.00009088573,0.00005695819,0.0001919881,0.0001248924,0.00011192737,0.00044715963,0.0001452318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011720136,0.00011776043,0.00019757511,0.000025570984,0.000005082859,0.000043137567,0.0000069401535,0.000031673608,0.9956119,0.000016083428,0.000024477427,0.002747718],"study_design_scores_gemma":[0.00021968676,0.010950758,0.017687479,0.000013522773,0.000033967342,0.0004105228,0.000044767887,0.0003924767,0.96885115,0.000048617512,0.0013402594,0.0000067559176],"about_ca_topic_score_codex":0.00021409157,"about_ca_topic_score_gemma":0.00035098175,"teacher_disagreement_score":0.00080089935,"about_ca_system_score_codex":0.00009601731,"about_ca_system_score_gemma":0.000102920596,"threshold_uncertainty_score":0.0026792884},"labels":[],"label_agreement":null},{"id":"W2068529456","doi":"10.1016/j.carres.2014.10.003","title":"The core and O-polysaccharide structure of the Caulobacter crescentus lipopolysaccharide","year":2014,"lang":"en","type":"article","venue":"Carbohydrate Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Caulobacter crescentus; Chemistry; Lipopolysaccharide; Polysaccharide; Microbiology; Core (optical fiber); Bacterial protein; Biochemistry; Gene","score_opus":0.02460335301644113,"score_gpt":0.2890386610004711,"score_spread":0.26443530798403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068529456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962858,0.0011353232,0.0010081766,0.00011152741,0.000023502196,0.000019438978,0.00024195765,0.0000062642607,0.001167896],"genre_scores_gemma":[0.9962483,0.0006429799,0.0015439009,0.00007280842,0.000016313415,0.000008718146,0.0004979002,0.000005705386,0.00096336164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993074,0.000012486389,0.000004703745,0.000011242322,0.000019084298,0.000021788635],"domain_scores_gemma":[0.9997811,0.000022672917,0.00006162832,0.000025254996,0.00004994699,0.000059441038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017869064,0.00037231867,0.00012932735,0.00031367864,0.00023984758,0.00039926716,0.00020815761,0.00024852468,0.00040916432],"category_scores_gemma":[0.00033654444,0.00010922648,0.00019464696,0.00035452525,0.00040705263,0.00034531133,0.00025863026,0.0003715972,0.00016425249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031671248,0.000035732002,0.00241697,0.000074398486,0.000009682532,0.00015834137,0.00006568637,0.00027687213,0.9907769,0.0008239376,0.00005692135,0.00498775],"study_design_scores_gemma":[0.000062598214,0.0012657348,0.12696053,0.00012118188,0.00009747979,0.0014379558,0.0007206931,0.002666093,0.85203594,0.0026264656,0.011949165,0.000056180892],"about_ca_topic_score_codex":0.0045657866,"about_ca_topic_score_gemma":0.0026441226,"teacher_disagreement_score":0.0045657866,"about_ca_system_score_codex":0.00043588792,"about_ca_system_score_gemma":0.00087081123,"threshold_uncertainty_score":0.009078383},"labels":[],"label_agreement":null},{"id":"W2068561324","doi":"10.1042/bj20090856","title":"Coactosin-like protein functions as a stabilizing chaperone for 5-lipoxygenase: role of tryptophan 102","year":2009,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Vetenskapsrådet; Karolinska Institutet","keywords":"Arachidonate 5-lipoxygenase; Tryptophan; Docking (animal); Chemistry; In vitro; Chaperone (clinical); Biochemistry; Enzyme; Cell biology; Biology; Amino acid; Arachidonic acid","score_opus":0.008160760702240071,"score_gpt":0.23607315671421095,"score_spread":0.22791239601197089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068561324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938089,0.0022387947,0.0030405733,0.00015965846,0.000018372011,0.000008117627,0.00006872394,0.000042652537,0.00061410957],"genre_scores_gemma":[0.9966466,0.00046496338,0.0015489877,0.00003217571,0.000008318407,0.00000613503,0.0001561628,0.0000062876256,0.0011303207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999654,0.0000060174343,0.000002049466,0.000010944228,0.0000064638416,0.0000091913535],"domain_scores_gemma":[0.9999449,0.000004820248,0.000016459273,0.0000047440417,0.0000061185087,0.000022950459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000716487,0.00031925229,0.00015948435,0.000078215235,0.0001525657,0.00021459596,0.00015124297,0.00027587634,0.0006460552],"category_scores_gemma":[0.000074399555,0.0000682451,0.00018984644,0.00005507147,0.0001344017,0.00018187086,0.00014797287,0.00021797961,0.00031508677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000849414,0.000009072581,0.0003657005,0.00002282914,0.0000027144513,0.00011664883,0.000005002119,0.000056205838,0.9984835,0.00006885931,0.000020471774,0.000764032],"study_design_scores_gemma":[0.000028014929,0.00024150504,0.025252337,0.000012431028,0.000022156011,0.0015770433,0.000057566616,0.008737693,0.9605796,0.0001456364,0.0033348363,0.000011154179],"about_ca_topic_score_codex":0.0003705865,"about_ca_topic_score_gemma":0.00034731568,"teacher_disagreement_score":0.0006460552,"about_ca_system_score_codex":0.0001885303,"about_ca_system_score_gemma":0.000097817676,"threshold_uncertainty_score":0.0021612644},"labels":[],"label_agreement":null},{"id":"W2068671129","doi":"10.1172/jci63528","title":"The NF-κB regulator MALT1 determines the encephalitogenic potential of Th17 cells","year":2012,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Deutsche Forschungsgemeinschaft; Canadian Institutes of Health Research; Terry Fox Foundation; Alexander von Humboldt-Stiftung","keywords":"RELB; Experimental autoimmune encephalomyelitis; Cell biology; Neuroinflammation; Biology; Regulator; Interleukin 17; Autoimmunity; Immunology; Cytokine; Transcription factor; Immune system; Inflammation; NFKB1","score_opus":0.039316574740532365,"score_gpt":0.3267949869912838,"score_spread":0.28747841225075144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068671129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99068147,0.005532281,0.0021325883,0.0001237505,0.000020645906,0.00002260785,0.00027580536,0.000061032708,0.0011498331],"genre_scores_gemma":[0.9963684,0.0017925625,0.00078759366,0.000026327561,0.000011401698,0.000013485432,0.00019528529,0.000014225725,0.0007906951],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998559,0.000030208073,0.000013512798,0.000033575336,0.000025760684,0.00004110535],"domain_scores_gemma":[0.999778,0.000027770506,0.0001068517,0.000018914123,0.00002034968,0.0000480209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001493057,0.00050095073,0.00026316277,0.00023401933,0.00014261846,0.00046401194,0.00013879723,0.0002516312,0.0018967845],"category_scores_gemma":[0.00022034065,0.00013601454,0.00013690117,0.00014959557,0.00036074992,0.00032960583,0.00023606334,0.0007599312,0.0006224467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014773622,0.000016100787,0.0007208633,0.00003766471,0.0000024851336,0.000083835475,0.000014988661,0.000018773098,0.9977773,0.000056274548,0.000019736186,0.0011043148],"study_design_scores_gemma":[0.000031763786,0.00041332425,0.018623492,0.000029760311,0.000033465363,0.0026171885,0.00009300741,0.00046532453,0.9737562,0.0002010175,0.0037288729,0.0000065140225],"about_ca_topic_score_codex":0.0001552899,"about_ca_topic_score_gemma":0.00017174604,"teacher_disagreement_score":0.0018967845,"about_ca_system_score_codex":0.00022734448,"about_ca_system_score_gemma":0.00017131947,"threshold_uncertainty_score":0.006345451},"labels":[],"label_agreement":null},{"id":"W2068804121","doi":"10.1371/journal.pone.0105713","title":"TLR Ligands Induce Antiviral Responses in Chicken Macrophages","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Biotechnology and Biological Sciences Research Council; Poultry Industry Council; Agriculture and Agri-Food Canada; Canadian Poultry Research Council","keywords":"TLR2; Biology; Interferon; Pattern recognition receptor; Innate immune system; CpG Oligodeoxynucleotide; Viral replication; Virology; Macrophage; Immunity; Toll-like receptor; Virus; Receptor; TLR9; Microbiology; Influenza A virus; Immune system; Immunology; Gene; Gene expression; In vitro","score_opus":0.023456890523161137,"score_gpt":0.226271725091809,"score_spread":0.20281483456864788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068804121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99414,0.0022087838,0.0012769093,0.00015486871,0.00006097036,0.000064084656,0.00029903356,0.00003111526,0.0017642636],"genre_scores_gemma":[0.99117213,0.0011675041,0.00256637,0.00025996077,0.000030577055,0.00013949533,0.00067649514,0.000015570638,0.0039719557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998511,0.00003516695,0.000016450258,0.000026246005,0.000024476849,0.00004660193],"domain_scores_gemma":[0.99990296,0.000021740107,0.000021997126,0.000011006438,0.000024084651,0.000018103525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013942359,0.0002696421,0.0002570937,0.00018321155,0.00012043539,0.00016732216,0.00008426601,0.00028427012,0.0012498111],"category_scores_gemma":[0.00012981254,0.00016442673,0.00031666236,0.00007462992,0.00015551246,0.000101939935,0.0002257295,0.00047521156,0.00049824914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001854174,0.000019244235,0.00015560599,0.000048907546,0.000002419789,0.000031471052,0.000019021883,0.000020060517,0.99897754,0.000014725616,0.000022477194,0.0005031922],"study_design_scores_gemma":[0.00006553326,0.0016272982,0.01104884,0.000030860276,0.000025561265,0.00030702507,0.00015100252,0.0005057155,0.98258483,0.00007698793,0.0035687902,0.000007592416],"about_ca_topic_score_codex":0.00028906908,"about_ca_topic_score_gemma":0.0005176567,"teacher_disagreement_score":0.0012498111,"about_ca_system_score_codex":0.00014997304,"about_ca_system_score_gemma":0.00012246969,"threshold_uncertainty_score":0.004181087},"labels":[],"label_agreement":null},{"id":"W2068929498","doi":"10.1046/j.1525-1373.2000.22304.x","title":"How the Blood Talks to the Brain Parenchyma and the Paraventricular Nucleus of the Hypothalamus During Systemic Inflammatory and Infectious Stimuli","year":2000,"lang":"en","type":"review","venue":"Proceedings of The Society for Experimental Biology and Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":257,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Proinflammatory cytokine; Signal transduction; STAT protein; Inflammation; Cell biology; Biology; Neuroscience; Blood–brain barrier; Transcription factor; Receptor; Janus kinase; Kinase; Central nervous system; Immunology; STAT3","score_opus":0.012489924450452957,"score_gpt":0.26368154539259603,"score_spread":0.2511916209421431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2068929498","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74991703,0.13134341,0.044583086,0.015535543,0.005156459,0.00019622142,0.0004359359,0.00042967903,0.052402657],"genre_scores_gemma":[0.94658524,0.021709697,0.0070625846,0.0027214307,0.0013831588,0.00013974779,0.00014576134,0.00008522999,0.020167073],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99970967,0.00007548988,0.000010537603,0.000071289876,0.00005006178,0.000082994935],"domain_scores_gemma":[0.99990094,0.000015740317,0.000018297,0.000006922171,0.00002373976,0.000034297853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002350354,0.00030607436,0.00035514732,0.00037524124,0.0005447987,0.0012679561,0.00037067907,0.0009295913,0.0022215554],"category_scores_gemma":[0.0003274419,0.00023178053,0.00034792017,0.00018580345,0.0013495949,0.0016128416,0.0005506494,0.0011385645,0.00046927837],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010903754,0.000094473035,0.004729602,0.0009893606,0.0001286745,0.006871156,0.0027671475,0.00051473285,0.86616,0.021436036,0.0037826698,0.09143583],"study_design_scores_gemma":[0.00032466967,0.0034900631,0.22537048,0.0013580687,0.0005715957,0.015842078,0.026147714,0.0058863685,0.44926703,0.07916107,0.19225158,0.00032927695],"about_ca_topic_score_codex":0.0009229862,"about_ca_topic_score_gemma":0.0011278372,"teacher_disagreement_score":0.0022215554,"about_ca_system_score_codex":0.00050592294,"about_ca_system_score_gemma":0.00053224503,"threshold_uncertainty_score":0.0074318647},"labels":[],"label_agreement":null},{"id":"W2069059519","doi":"10.1186/ar4643","title":"Phenotypic consequences of TLR7-driven interferon and proinflammatory cytokine production in lupus","year":2014,"lang":"en","type":"article","venue":"Arthritis Research & Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Lupus Research Alliance; Canadian Arthritis Network; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Arthritis Society; Central New York Community Foundation; Merck KGaA; Lupus Foundation of America","keywords":"Proinflammatory cytokine; Rheumatology; Medicine; TLR7; Phenotype; Systemic lupus erythematosus; Cytokine; Immunology; Interferon; Internal medicine; Inflammation; Biology; Immune system; Toll-like receptor; Genetics; Gene; Innate immune system","score_opus":0.028425779761982142,"score_gpt":0.2954263653342136,"score_spread":0.2670005855722315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069059519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983076,0.00042072858,0.0005023337,0.000032714277,0.00000587105,0.00000758991,0.00021174455,0.0000265196,0.00048496787],"genre_scores_gemma":[0.99816054,0.00024316035,0.0005190905,0.000032138745,0.0000058458163,0.000018429873,0.00031457446,0.00001145548,0.0006948295],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997212,0.00005112946,0.00003962306,0.00004891894,0.000072913004,0.00006619534],"domain_scores_gemma":[0.99971706,0.000033054363,0.00009138709,0.000030395402,0.00002635824,0.000101746184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022259733,0.00029755363,0.00026857885,0.00032787802,0.000135352,0.00032443216,0.00015039995,0.00040342694,0.0011209982],"category_scores_gemma":[0.0001549862,0.00018054784,0.00029574218,0.00011168589,0.00024323471,0.00014744118,0.00021913095,0.00065478456,0.0004381688],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014017914,0.000015139302,0.00053792243,0.000015975977,0.0000030345439,0.00010681111,0.000010548928,0.00001638656,0.9988103,0.000030884232,0.000008201485,0.0003047194],"study_design_scores_gemma":[0.00006464465,0.0010500922,0.03419848,0.000017419477,0.000043891483,0.003780182,0.00010259546,0.00069482124,0.9588082,0.0001563083,0.0010730482,0.000010328142],"about_ca_topic_score_codex":0.00013637844,"about_ca_topic_score_gemma":0.0001801793,"teacher_disagreement_score":0.0011209982,"about_ca_system_score_codex":0.00019970267,"about_ca_system_score_gemma":0.00010217215,"threshold_uncertainty_score":0.0037500858},"labels":[],"label_agreement":null},{"id":"W2069123375","doi":"10.1097/01.tp.0000332376.92291.5e","title":"COMBINATION OF ANTI-LFA-1 AND ANTI-CD154 MONOCLONAL ANTIBODIES INDUCES TISSUE-SPECIFIC TOLERANCE TO NEONATAL PORCINE ISLET XENOGRAFTS","year":2008,"lang":"en","type":"article","venue":"Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Islet; CD154; Monoclonal antibody; Antibody; Immunology; Medicine; Biology; Molecular biology; Endocrinology; CD40; Insulin; Biochemistry; Cytotoxic T cell; In vitro","score_opus":0.016495963806270827,"score_gpt":0.24019683959546928,"score_spread":0.22370087578919845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069123375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99111533,0.0031210075,0.0012605591,0.00026408068,0.00022825004,0.000050391453,0.0003776354,0.00013200504,0.0034508654],"genre_scores_gemma":[0.990794,0.0022018426,0.0013448329,0.00015439869,0.00013195645,0.00009717784,0.0006702023,0.000039017632,0.004566649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999613,0.00008490175,0.000045789355,0.00006332801,0.000087464265,0.00010559304],"domain_scores_gemma":[0.9997825,0.000050891005,0.00005094442,0.000026069763,0.000016054117,0.00007359696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034165525,0.0003456952,0.00054361473,0.00045819866,0.00015335358,0.0003428462,0.00037826627,0.00037241256,0.0032912346],"category_scores_gemma":[0.00028836413,0.000168439,0.0002577072,0.00021879816,0.00013998429,0.00026257132,0.00020414805,0.0006977515,0.00082684634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020001384,0.0009914992,0.000504279,0.00010205585,0.000022735847,0.00022304442,0.000027685057,0.00023108875,0.98084694,0.0001674173,0.0010075663,0.013875592],"study_design_scores_gemma":[0.00054558663,0.0066931476,0.0109331645,0.000029563293,0.000100374804,0.0008733436,0.00006143296,0.0012280898,0.9715441,0.00010992134,0.007862102,0.000019082438],"about_ca_topic_score_codex":0.00028652063,"about_ca_topic_score_gemma":0.0004885866,"teacher_disagreement_score":0.0032912346,"about_ca_system_score_codex":0.0002774976,"about_ca_system_score_gemma":0.00028133258,"threshold_uncertainty_score":0.011010349},"labels":[],"label_agreement":null},{"id":"W2069164518","doi":"10.1038/mi.2013.48","title":"Imaging murine NALT following intranasal immunization with flagellin-modified circumsporozoite protein malaria vaccines","year":2013,"lang":"en","type":"article","venue":"Mucosal Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; Wake Forest University; National Institute of Allergy and Infectious Diseases; National Institutes of Health; School of Medicine, New York University; York University","keywords":"Flagellin; Germinal center; Circumsporozoite protein; Microfold cell; Biology; Immunology; CD11c; Immune system; Population; Antigen; Immunization; Antibody; Epitope; B cell; Receptor; Medicine","score_opus":0.004838369456303777,"score_gpt":0.19801127119714645,"score_spread":0.19317290174084267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069164518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9508956,0.0034645614,0.030001381,0.00084986497,0.00032602632,0.00019939522,0.0013354737,0.00041725874,0.012510537],"genre_scores_gemma":[0.96143746,0.0014262632,0.018270643,0.0003380985,0.00005759578,0.00017320614,0.00071666564,0.00012326169,0.017456746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984527,0.000016993044,0.0000047611084,0.000030474452,0.000038097205,0.00006431575],"domain_scores_gemma":[0.9998394,0.000026995749,0.000036731897,0.000012387439,0.000037015685,0.000047413185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030996796,0.00041038156,0.00023877334,0.00044750972,0.00027070413,0.00036287968,0.00028727064,0.00082679,0.0026051782],"category_scores_gemma":[0.00019900297,0.00028949548,0.00032158583,0.0001614899,0.00034789243,0.00042670587,0.00023502219,0.0018011403,0.0005734092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004433491,0.00007929221,0.00029176023,0.00005518589,0.000008639764,0.0001151078,0.000041549727,0.00022215855,0.9961182,0.00025999954,0.00021001717,0.0021546488],"study_design_scores_gemma":[0.00008502481,0.00069424085,0.0068256673,0.000031023654,0.000048334503,0.00059056416,0.00012539072,0.006551119,0.9821555,0.00016453402,0.002716486,0.0000120061],"about_ca_topic_score_codex":0.004255579,"about_ca_topic_score_gemma":0.0057379403,"teacher_disagreement_score":0.004255579,"about_ca_system_score_codex":0.0006108592,"about_ca_system_score_gemma":0.00055863085,"threshold_uncertainty_score":0.008715153},"labels":[],"label_agreement":null},{"id":"W2069212946","doi":"10.1016/j.brainresbull.2011.09.006","title":"Circulating IL-6 contributes to peripheral LPS-induced mPGES-1 expression in the rat brain","year":2011,"lang":"en","type":"article","venue":"Brain Research Bulletin","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute","funders":"Canadian Institutes of Health Research; Max-Planck-Gesellschaft; Deutsche Forschungsgemeinschaft","keywords":"Inflammation; Endocrinology; Cytokine; Internal medicine; SOCS3; STAT protein; Biology; Lipopolysaccharide; STAT3; Signal transduction; Medicine; Cell biology","score_opus":0.07990501330304484,"score_gpt":0.3330004166413258,"score_spread":0.25309540333828096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069212946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99247664,0.0032075532,0.0026277816,0.00027957946,0.00007955303,0.00002374255,0.00032012424,0.00007115063,0.0009139325],"genre_scores_gemma":[0.9918039,0.002217734,0.0023277788,0.00011626918,0.00019581777,0.0000726479,0.00035772807,0.00003331746,0.002874865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999236,0.000009606796,0.0000045268725,0.000019103538,0.000015859063,0.000027351822],"domain_scores_gemma":[0.9997068,0.000025917669,0.00009150232,0.000021813235,0.000036976766,0.00011697165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001366212,0.0005249067,0.00044789616,0.0005744526,0.00026967167,0.0004603039,0.00015002726,0.00027667865,0.0016773926],"category_scores_gemma":[0.00024454226,0.00025618443,0.00028746022,0.00018999747,0.0006519914,0.0005689773,0.00029741158,0.0016563383,0.00038117068],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057148067,0.00015610112,0.0015931892,0.00017003523,0.000024983776,0.0004082389,0.00010522507,0.00006633184,0.9843158,0.0001813409,0.00015081982,0.007113043],"study_design_scores_gemma":[0.00033612296,0.0026361872,0.12804168,0.00007721058,0.00024301957,0.0013669871,0.00048115422,0.0017790715,0.8613711,0.001882632,0.0017401507,0.00004470183],"about_ca_topic_score_codex":0.00064392615,"about_ca_topic_score_gemma":0.00081655633,"teacher_disagreement_score":0.0016773926,"about_ca_system_score_codex":0.00031914882,"about_ca_system_score_gemma":0.00040120806,"threshold_uncertainty_score":0.0056114197},"labels":[],"label_agreement":null},{"id":"W2069240580","doi":"10.1016/s0264-410x(02)00549-2","title":"Development of short non-CpG phosphodiester oligonucleotides as immune stimulatory agents","year":2003,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BioPhage Pharma (Canada)","funders":"","keywords":"Phosphodiester bond; Oligonucleotide; CpG Oligodeoxynucleotide; CpG site; Biology; Peripheral blood mononuclear cell; Molecular biology; Immune system; DNA; Biochemistry; Immunology; Gene; DNA methylation; In vitro; RNA; Gene expression","score_opus":0.01349389214211572,"score_gpt":0.25073129387508375,"score_spread":0.23723740173296803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069240580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92705977,0.0147159435,0.0514087,0.0005608518,0.00045126266,0.00039622953,0.00025005842,0.0002724107,0.004884811],"genre_scores_gemma":[0.93511355,0.008034468,0.04917967,0.00032012927,0.00008654242,0.0003357567,0.00047683937,0.000036271926,0.0064167804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998965,0.000022297492,0.0000095034675,0.000019574843,0.00002430135,0.000027682727],"domain_scores_gemma":[0.9998708,0.00003155301,0.000029199187,0.000009419821,0.000024083049,0.00003495932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042710017,0.00047415047,0.00029232248,0.00022829238,0.000117125564,0.00027751215,0.00033456998,0.0004489237,0.0014169039],"category_scores_gemma":[0.0002616317,0.00021889854,0.0002572001,0.00010539137,0.00019860944,0.0003253716,0.00022765876,0.0006747398,0.00036739846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021781246,0.000102460304,0.000070757,0.00010687696,0.000007904319,0.000059281432,0.000016635619,0.0004976279,0.9841558,0.00070870284,0.000095929885,0.013960166],"study_design_scores_gemma":[0.000072603,0.0014719309,0.00024286546,0.000013837641,0.000027203441,0.00015252728,0.000010300713,0.0011418178,0.9915501,0.00014784354,0.005163296,0.0000056913286],"about_ca_topic_score_codex":0.00021538886,"about_ca_topic_score_gemma":0.000443259,"teacher_disagreement_score":0.0014169039,"about_ca_system_score_codex":0.00025227643,"about_ca_system_score_gemma":0.00034070696,"threshold_uncertainty_score":0.00474},"labels":[],"label_agreement":null},{"id":"W2069493168","doi":"10.1089/jir.2006.0167","title":"Preparation and Characterization of Monopegylated Human Granulocyte-Macrophage Colony-Stimulating Factor","year":2008,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada)","funders":"","keywords":"PEGylation; Chemistry; Sodium dodecyl sulfate; Chromatography; High-performance liquid chromatography; Size-exclusion chromatography; Polyethylene glycol; PEG ratio; Polyacrylamide gel electrophoresis; Granulocyte macrophage colony-stimulating factor; Gel electrophoresis; Recombinant DNA; Peptide; Bioassay; Biochemistry; In vitro; Biology; Enzyme","score_opus":0.05700557202002377,"score_gpt":0.3624183520511262,"score_spread":0.30541278003110245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069493168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873105,0.0011936519,0.009957431,0.00008820701,0.000018157085,0.000091462745,0.0005164852,0.00004105776,0.00078304525],"genre_scores_gemma":[0.98016673,0.00078556995,0.015487957,0.00012827807,0.000014747118,0.00008661281,0.001619421,0.000031707204,0.0016789708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999095,0.000018982355,0.000008910216,0.000018177083,0.000030839892,0.000013501789],"domain_scores_gemma":[0.9998647,0.000029036784,0.00003616041,0.000022833832,0.000022563203,0.000024820143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019044892,0.00032131953,0.00012972666,0.00016078542,0.000064537104,0.00015814824,0.000113509304,0.00018092127,0.0003955748],"category_scores_gemma":[0.00033192575,0.00009839967,0.00014010622,0.000105615625,0.00012260769,0.000118322205,0.00011836847,0.00027628773,0.00026757058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005121921,0.00001155393,0.000103126185,0.000015408375,0.0000020973914,0.000028087445,0.000007996727,0.00009945318,0.9980894,0.000039510993,0.000019874593,0.00153234],"study_design_scores_gemma":[0.000012889709,0.00020739132,0.0019408757,0.0000061149526,0.0000075659514,0.00023252789,0.00000504762,0.00078862376,0.99392706,0.00005250199,0.0028154277,0.000004020286],"about_ca_topic_score_codex":0.00042788713,"about_ca_topic_score_gemma":0.0003260812,"teacher_disagreement_score":0.00042788713,"about_ca_system_score_codex":0.00022320343,"about_ca_system_score_gemma":0.0001523841,"threshold_uncertainty_score":0.0016194582},"labels":[],"label_agreement":null},{"id":"W2069681232","doi":"10.1128/iai.70.4.1997-2009.2002","title":"Host Immune Response to<i>Salmonella enterica</i>Serovar Typhimurium Infection in Mice Derived from Wild Strains","year":2002,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre hospitalier de l'Université Laval; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Biology; Spleen; Salmonella enterica; Microbiology; Lipopolysaccharide; Salmonella; Tumor necrosis factor alpha; Immune system; Cytokine; Enterobacteriaceae; Mononuclear phagocyte system; Immunology; Bacteria; Gene; Escherichia coli","score_opus":0.014784306629117464,"score_gpt":0.23270688332278577,"score_spread":0.21792257669366832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069681232","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961665,0.0007135766,0.00099117,0.00016227909,0.000046256813,0.00005454071,0.00055202364,0.00017305171,0.0011405473],"genre_scores_gemma":[0.9916802,0.0007503623,0.0027239984,0.00030404585,0.000031554002,0.00018357423,0.0015267377,0.00010731047,0.0026922177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956423,0.00007905219,0.000060724527,0.00010915165,0.00006214358,0.00012459116],"domain_scores_gemma":[0.9993581,0.00005718681,0.00022987326,0.000057304183,0.000044019722,0.0002534081],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003879886,0.0007841939,0.00044938826,0.0008453642,0.00027681902,0.0005495921,0.00029046615,0.0007799534,0.0017372535],"category_scores_gemma":[0.00021619273,0.00036233384,0.00048530241,0.00022191476,0.00052711274,0.00038236534,0.00027617818,0.0017471537,0.0005212993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011747624,0.0003020094,0.0010265532,0.00004678257,0.000013271264,0.00010747351,0.000045968372,0.0000474111,0.9960962,0.000078474455,0.00007178902,0.0009893397],"study_design_scores_gemma":[0.00039311085,0.01067226,0.06593703,0.00009028641,0.00013044338,0.0024889458,0.00033268155,0.001516074,0.9146246,0.00020441035,0.0035578676,0.000052524563],"about_ca_topic_score_codex":0.00044536314,"about_ca_topic_score_gemma":0.0005206681,"teacher_disagreement_score":0.0017372535,"about_ca_system_score_codex":0.0004196071,"about_ca_system_score_gemma":0.00022723048,"threshold_uncertainty_score":0.005811751},"labels":[],"label_agreement":null},{"id":"W2070068579","doi":"10.1139/y05-065","title":"Fever and lethargy induced by subcutaneous pyrogen infusion in unrestrained rats","year":2005,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; National Research Foundation","keywords":"Bolus (digestion); Lipopolysaccharide; Medicine; Subcutaneous injection; Saline; Endocrinology; Anesthesia; Internal medicine; Continuous infusion; Cytokine; Pharmacology","score_opus":0.008917815787973462,"score_gpt":0.24016480947362878,"score_spread":0.23124699368565532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070068579","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99886024,0.00038159968,0.00043754166,0.000020774447,0.00001267174,0.000017005535,0.000065314205,0.000035152007,0.00016978482],"genre_scores_gemma":[0.99722254,0.0005022358,0.0010186239,0.000071573,0.000019339117,0.000091503985,0.00023107925,0.000014732727,0.0008282925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997471,0.00003895564,0.000016435375,0.000055325327,0.000068105845,0.00007414249],"domain_scores_gemma":[0.99950576,0.00005921513,0.00020692882,0.00006930712,0.000036850422,0.00012194918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001937092,0.0006568118,0.00054996676,0.00035362787,0.00015776536,0.00029978264,0.000293749,0.00038951193,0.0008550586],"category_scores_gemma":[0.00031900857,0.00024924154,0.00046545768,0.00016571487,0.00075424503,0.00033708903,0.00031557167,0.0014133111,0.00017845123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019223362,0.0002716841,0.0011352471,0.000036164143,0.000016062042,0.00017434957,0.00006984888,0.00012579683,0.99399215,0.000037897742,0.000026952834,0.0021914358],"study_design_scores_gemma":[0.0003059798,0.026045553,0.060336076,0.000026163467,0.00009505091,0.0007543789,0.00021354131,0.002281039,0.90871215,0.00014697658,0.0010377247,0.000045429944],"about_ca_topic_score_codex":0.0008096641,"about_ca_topic_score_gemma":0.0017435664,"teacher_disagreement_score":0.0008550586,"about_ca_system_score_codex":0.0004244027,"about_ca_system_score_gemma":0.00031818604,"threshold_uncertainty_score":0.0030792356},"labels":[],"label_agreement":null},{"id":"W2070456388","doi":"10.1159/000317035","title":"Gene Expression Profiling of Apoptosis Regulators in Patients with Sepsis","year":2010,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Sepsis; Monocyte; Apoptosis; Immunology; Biology; Immune system; Granulocyte; Immunosuppression; Gene expression; Molecular biology; Gene; Lymphocyte; Genetics","score_opus":0.0056982646176194675,"score_gpt":0.2178236781575752,"score_spread":0.21212541353995573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070456388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985936,0.0006481765,0.00031945907,0.000026430735,0.0000051874345,0.000007710451,0.00024518993,0.000006675099,0.0001474351],"genre_scores_gemma":[0.9980895,0.0003223562,0.000627644,0.000043215477,0.000016444217,0.000027666423,0.00060935627,0.0000034253203,0.0002602876],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997825,0.00005375079,0.000022034934,0.000055651148,0.00004477601,0.000041195424],"domain_scores_gemma":[0.999658,0.00009009692,0.00013074241,0.000014606645,0.00007021635,0.000036399288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017437998,0.00021066862,0.0003404214,0.00053303374,0.00020759649,0.00034284097,0.000089683956,0.00026237112,0.001155051],"category_scores_gemma":[0.0006308742,0.00009659385,0.00012460227,0.00041483148,0.0001847097,0.000101727084,0.00017610505,0.00026091677,0.00024859412],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0067940843,0.0001981171,0.43041283,0.00034001016,0.000117616706,0.0017892449,0.00055997394,0.00038530584,0.530895,0.000069308604,0.00039546462,0.028043056],"study_design_scores_gemma":[0.0001606723,0.0038002382,0.8721452,0.00006721365,0.00020897282,0.007773896,0.0007161915,0.0012416935,0.1107116,0.00029593418,0.0028499651,0.000028386969],"about_ca_topic_score_codex":0.00010855498,"about_ca_topic_score_gemma":0.00012121307,"teacher_disagreement_score":0.001155051,"about_ca_system_score_codex":0.00014450519,"about_ca_system_score_gemma":0.00010776371,"threshold_uncertainty_score":0.00386405},"labels":[],"label_agreement":null},{"id":"W2070514352","doi":"10.1097/00003246-200007000-00054","title":"Changes in circulating lymphocyte subpopulations and mitogen-stimulated response in a rat infusion model of intra-abdominal infection","year":2000,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lockheed Martin (Canada); Department of National Defence; Defence Research and Development Canada","funders":"","keywords":"Splenocyte; Concanavalin A; Medicine; Lymphocyte; Immune system; Immunology; Lymphocytopenia; Andrology; Interleukin 2; Internal medicine; Leukopenia; Endocrinology; In vitro; Toxicity; Biology","score_opus":0.020900503716913894,"score_gpt":0.2934627533996971,"score_spread":0.2725622496827832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070514352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801314,0.0006447421,0.00058525166,0.00005887906,0.00006452905,0.00032838408,0.00011564496,0.000043017804,0.00014641663],"genre_scores_gemma":[0.9894058,0.0016277715,0.0041361945,0.00021578479,0.00021932906,0.0018323724,0.0007496009,0.000021590447,0.0017914625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989072,0.00029564364,0.0000877282,0.00021231652,0.00022707661,0.00026999903],"domain_scores_gemma":[0.9986829,0.0001395814,0.0006604438,0.00010636418,0.00009752041,0.0003131042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013530802,0.0021639604,0.0019328707,0.00068243296,0.00029127923,0.0006635655,0.00088104355,0.0011187616,0.0010905848],"category_scores_gemma":[0.0007007017,0.0004924949,0.0005527157,0.00037343163,0.0011181957,0.00065532967,0.000325069,0.0026019947,0.00023346662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.1638783,0.075198814,0.0061778803,0.0008659591,0.0001829387,0.0003838601,0.00014253137,0.0007808008,0.73065,0.00019211015,0.00041271147,0.021134106],"study_design_scores_gemma":[0.015886124,0.74122375,0.015178461,0.00007228182,0.0003570135,0.0005187656,0.00011118958,0.0016364118,0.2234746,0.00006388138,0.0014044312,0.00007309648],"about_ca_topic_score_codex":0.0002743827,"about_ca_topic_score_gemma":0.0005893919,"teacher_disagreement_score":0.0021639604,"about_ca_system_score_codex":0.00051519595,"about_ca_system_score_gemma":0.00078060734,"threshold_uncertainty_score":0.0071558952},"labels":[],"label_agreement":null},{"id":"W2070731070","doi":"10.1158/0008-5472.can-06-2381","title":"Toll-like Receptor-7 Tolerizes Malignant B Cells and Enhances Killing by Cytotoxic Agents","year":2007,"lang":"en","type":"article","venue":"Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Immunovaccine (Canada); University of Toronto; Sanofi (Canada); Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research","keywords":"Cytotoxic T cell; Chronic lymphocytic leukemia; TLR7; Toll-like receptor; Cancer research; Receptor; Biology; Tumor necrosis factor alpha; Kinase; Cell biology; Signal transduction; Immunology; Leukemia; Immune system; Innate immune system; Biochemistry","score_opus":0.036779376317135806,"score_gpt":0.34654889899481034,"score_spread":0.30976952267767455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2070731070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99688005,0.0015365137,0.000415226,0.000041204596,0.000009361118,0.000008453396,0.000033206215,0.000037134832,0.00103889],"genre_scores_gemma":[0.9977234,0.00078234484,0.00043598484,0.000030405285,0.000012738694,0.000009606872,0.00012998139,0.000010441296,0.0008650433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998337,0.000044417044,0.000009290291,0.000012331698,0.000042743734,0.000057412977],"domain_scores_gemma":[0.9998888,0.000025426556,0.000022601522,0.000016240221,0.000012563959,0.000034356293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014643394,0.00027824574,0.00025209825,0.00026809456,0.00009288295,0.00027918513,0.00015150568,0.00018336781,0.0012002856],"category_scores_gemma":[0.00014668073,0.00010114768,0.00015890949,0.00011389452,0.00018710019,0.00019644508,0.00025124714,0.0003423137,0.00043005726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024769682,0.000075091964,0.00039248672,0.000034701166,0.000005704064,0.00006318115,0.000016726113,0.00007589594,0.9959282,0.00011269318,0.000050253795,0.0029973448],"study_design_scores_gemma":[0.00006652251,0.0020438258,0.009095329,0.00001171483,0.000027481547,0.0009042386,0.000060975482,0.0010517196,0.9826199,0.00013808216,0.003975263,0.000004961507],"about_ca_topic_score_codex":0.00011272674,"about_ca_topic_score_gemma":0.00015721499,"teacher_disagreement_score":0.0012002856,"about_ca_system_score_codex":0.00013817988,"about_ca_system_score_gemma":0.00011718186,"threshold_uncertainty_score":0.004015386},"labels":[],"label_agreement":null},{"id":"W2071202481","doi":"10.1139/w11-002","title":"Mucosal and systemic immune responses of mice to tetanus toxoid coadministered nasally with AFCo1","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Adjuvant; Toxoid; Immune system; Nasal administration; Immunology; Immunization; Tetanus; Medicine; Antigen; Antibody; Vaccination","score_opus":0.015226195585748009,"score_gpt":0.2026129595923017,"score_spread":0.18738676400655369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071202481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921699,0.0010414984,0.0016668297,0.00037516834,0.00014436038,0.00017111942,0.0011579358,0.00025533992,0.0030177897],"genre_scores_gemma":[0.98163533,0.0009210355,0.0028868513,0.00048207535,0.00008581339,0.00029465364,0.0015239421,0.00009312895,0.012077135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993193,0.000077818,0.000045599354,0.00019248386,0.0001360259,0.00022875036],"domain_scores_gemma":[0.999423,0.00009868452,0.000112303635,0.00007035037,0.000069815556,0.00022578234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005428769,0.0011648756,0.00064231287,0.0011324509,0.00044375492,0.0005010124,0.0003909971,0.0012815167,0.0022700075],"category_scores_gemma":[0.00035190478,0.0005536877,0.0006281787,0.0002475926,0.0006451691,0.0006494769,0.00032361815,0.0028484764,0.0008196543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016993745,0.0011490991,0.00038644162,0.000075514574,0.000014999823,0.00009079776,0.00013492159,0.00012271845,0.9938292,0.0001476921,0.00016502237,0.0021841242],"study_design_scores_gemma":[0.00040984436,0.018080147,0.010622087,0.000057848905,0.00008552262,0.00054008677,0.00017754226,0.0021736522,0.9646623,0.00027332286,0.0028834941,0.00003413385],"about_ca_topic_score_codex":0.0015622214,"about_ca_topic_score_gemma":0.0019549355,"teacher_disagreement_score":0.0022700075,"about_ca_system_score_codex":0.0006802742,"about_ca_system_score_gemma":0.0005885019,"threshold_uncertainty_score":0.00759393},"labels":[],"label_agreement":null},{"id":"W2071269494","doi":"10.1073/pnas.1116273108","title":"Characterization of dsRNA-induced pancreatitis model reveals the regulatory role of <i>IFN regulatory factor 2</i> ( <i>Irf2</i> ) in <i>trypsinogen5</i> gene transcription","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"Ministry of Education, Culture, Sports, Science and Technology","keywords":"Transcription factor; Interferon regulatory factors; Gene; Biology; Regulatory sequence; IRF8; Computational biology; Genetics; Cancer research","score_opus":0.03568380486616138,"score_gpt":0.24027622802246248,"score_spread":0.2045924231563011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071269494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913263,0.00097172894,0.0047388785,0.0001516517,0.00005441206,0.00008325923,0.0006137142,0.00020486308,0.0018552911],"genre_scores_gemma":[0.9904276,0.0008600716,0.003628431,0.00011240322,0.000022890697,0.00011342254,0.0013433425,0.000042690557,0.003449109],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998018,0.000025835412,0.000021394302,0.00006169735,0.000034957608,0.000054333494],"domain_scores_gemma":[0.99982315,0.0000140435,0.000060392656,0.00002431823,0.000009230458,0.0000688911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015994487,0.000502827,0.0002976175,0.0005089857,0.0001787375,0.00026551163,0.00020063136,0.0004397119,0.001779207],"category_scores_gemma":[0.00009849543,0.0002020404,0.00048291762,0.00017148176,0.00032027447,0.00031967228,0.00020106953,0.0010051765,0.0005956778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024479252,0.00009251063,0.000371851,0.000023171968,0.0000056518775,0.00019224432,0.000008766114,0.00002673242,0.9982717,0.00008745535,0.00004154959,0.00063356495],"study_design_scores_gemma":[0.0001023191,0.002180892,0.021962313,0.000018597795,0.00006371024,0.0043450524,0.000070226444,0.0014294635,0.9666578,0.00017258177,0.0029799382,0.000017096987],"about_ca_topic_score_codex":0.00017921993,"about_ca_topic_score_gemma":0.00021602541,"teacher_disagreement_score":0.001779207,"about_ca_system_score_codex":0.00027394725,"about_ca_system_score_gemma":0.00013449964,"threshold_uncertainty_score":0.0059520006},"labels":[],"label_agreement":null},{"id":"W2071315228","doi":"10.1086/341080","title":"Polymorphisms of the Human Leukocyte Antigen DRB1 and DQB1 Genes and the Natural History of Human Papillomavirus Infection","year":2002,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University","funders":"National Cancer Institute; Ludwig Institute for Cancer Research; McGill University","keywords":"Persistence (discontinuity); Human leukocyte antigen; Cohort; Logistic regression; Haplotype; Confounding; Immunology; Biology; Natural history; Human papillomavirus; Medicine; Gene; Virology; Genotype; Internal medicine; Genetics; Antigen","score_opus":0.009791660967806643,"score_gpt":0.21475715285061314,"score_spread":0.2049654918828065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071315228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994815,0.00021767999,0.00008132051,0.000027620985,0.0000028113066,0.0000028888282,0.00009065075,0.0000017020031,0.00009385166],"genre_scores_gemma":[0.99951386,0.00010051947,0.00009158103,0.000014792626,0.000005640785,0.0000032861453,0.00010067998,0.0000014172638,0.00016821663],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959713,0.00014582743,0.00001870183,0.000081365295,0.000062109495,0.00009484232],"domain_scores_gemma":[0.99830437,0.00049910357,0.00057414256,0.00018199596,0.00012048624,0.00032002662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009307102,0.00024676518,0.0001922737,0.00045903123,0.00026591241,0.0004505627,0.0003511911,0.0003130638,0.0010392403],"category_scores_gemma":[0.003301382,0.00032090774,0.00021651907,0.00045916936,0.0002882586,0.00033099766,0.00020966648,0.0005738181,0.00013220085],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032129145,0.000047594036,0.9970067,0.0000038559388,0.00007254442,0.00005843635,0.000060513325,0.000037364895,0.0006902583,0.000029271765,0.000041978565,0.0016303274],"study_design_scores_gemma":[0.00001576266,0.0001960482,0.99879384,0.000003951093,0.000055206456,0.00030339154,0.000050059345,0.00017191653,0.00018561947,0.000039504466,0.00018063374,0.0000040809173],"about_ca_topic_score_codex":0.006923449,"about_ca_topic_score_gemma":0.0073680915,"teacher_disagreement_score":0.006923449,"about_ca_system_score_codex":0.00028801436,"about_ca_system_score_gemma":0.00030711645,"threshold_uncertainty_score":0.013766289},"labels":[],"label_agreement":null},{"id":"W2071621125","doi":"10.1111/cbdd.12278","title":"Homology and Molecular Dynamics Models of Toll‐Like Receptor 7 Protein and Its Dimerization","year":2014,"lang":"en","type":"article","venue":"Chemical Biology & Drug Design","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Kommission für Technologie und Innovation","keywords":"Homology modeling; Docking (animal); Transmembrane protein; Receptor; G protein-coupled receptor; Toll-like receptor; Computational biology; Transmembrane domain; Innate immune system; Dimer; Chemistry; Protein structure; Protein–protein interaction; Biology; Biochemistry; Medicine","score_opus":0.007432775407711608,"score_gpt":0.20213239752034703,"score_spread":0.19469962211263542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2071621125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90389925,0.0013156804,0.057779904,0.001217971,0.000106009604,0.00011877971,0.001349841,0.00036644295,0.033846024],"genre_scores_gemma":[0.97941107,0.00080286525,0.013594344,0.00013617784,0.000029366105,0.000265402,0.0011172611,0.00007595994,0.00456747],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99987924,0.000037114263,0.0000055223272,0.000019308043,0.000028418037,0.000030464502],"domain_scores_gemma":[0.9998259,0.0000753819,0.000022113109,0.000013132593,0.000026929276,0.00003646878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000204496,0.00045952707,0.0006206193,0.00038671243,0.0008309445,0.0006052087,0.0008725725,0.0009909387,0.0034219266],"category_scores_gemma":[0.00043577803,0.00032413812,0.0005975025,0.00047126936,0.0004508338,0.0006353054,0.0003998013,0.0005490509,0.00043291884],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085363936,0.00008398024,0.00047588666,0.000033793545,0.000019668243,0.00013625476,0.00006124995,0.9822895,0.003814027,0.011313426,0.00045048565,0.0012363824],"study_design_scores_gemma":[0.000043231023,0.000024159364,0.00017882945,0.000003268891,0.0000036961214,0.000010123264,0.00001402604,0.997008,0.0003177235,0.0017607216,0.00063060026,0.0000056776134],"about_ca_topic_score_codex":0.01186249,"about_ca_topic_score_gemma":0.0037549285,"teacher_disagreement_score":0.01186249,"about_ca_system_score_codex":0.0011793487,"about_ca_system_score_gemma":0.00096362625,"threshold_uncertainty_score":0.02358687},"labels":[],"label_agreement":null},{"id":"W2072207757","doi":"10.1089/jir.2011.0091","title":"Negative Regulation of the Type I Interferon Signaling Pathway by Synthetic Toll-Like Receptor 7 Ligands","year":2012,"lang":"en","type":"article","venue":"Journal of Interferon & Cytokine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"","keywords":"TLR7; TLR3; Interferon; Cell biology; STAT2; Biology; STAT1; TLR9; Receptor; Chemistry; Molecular biology; Signal transduction; Toll-like receptor; STAT protein; Biochemistry; Innate immune system; Gene expression; Gene; STAT3; Virology","score_opus":0.03336983438788251,"score_gpt":0.3052876667000093,"score_spread":0.2719178323121268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072207757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9749518,0.01144288,0.007747486,0.00022798123,0.00013600949,0.00004186138,0.0006015064,0.00019827348,0.004652179],"genre_scores_gemma":[0.99069655,0.0034038322,0.0030317723,0.00013852051,0.000027445707,0.000056100198,0.00070220785,0.000025579138,0.0019180888],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997981,0.000052477742,0.000017016748,0.000029547884,0.000072561896,0.000030276124],"domain_scores_gemma":[0.9998901,0.00002606096,0.00003789078,0.000012790659,0.000015682954,0.000017448929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016533905,0.0003559995,0.00017583642,0.00011791133,0.00006486856,0.00021691644,0.00014830085,0.0001580513,0.0013806354],"category_scores_gemma":[0.00018925255,0.000077003075,0.00017406816,0.000055761102,0.00020444686,0.000108653374,0.00016599747,0.0002779125,0.00046745344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012356976,0.000010326288,0.0004016096,0.000056705074,0.000005743456,0.00006117286,0.0000060036227,0.000031670872,0.99584514,0.00015350911,0.000065891865,0.003238624],"study_design_scores_gemma":[0.000020180983,0.00034895714,0.005599583,0.000018878498,0.000025326146,0.0009835131,0.0000253346,0.00079533766,0.9856673,0.00019326051,0.0063151037,0.000007095781],"about_ca_topic_score_codex":0.00005881748,"about_ca_topic_score_gemma":0.000068821326,"teacher_disagreement_score":0.0013806354,"about_ca_system_score_codex":0.000114650305,"about_ca_system_score_gemma":0.00011908454,"threshold_uncertainty_score":0.0046186447},"labels":[],"label_agreement":null},{"id":"W2072492830","doi":"10.2165/00126839-200809030-00001","title":"A Review of the Role of CpG Oligodeoxynucleotides as Toll-Like Receptor 9 Agonists in Prophylactic and Therapeutic Vaccine Development in Infectious Diseases","year":2008,"lang":"en","type":"review","venue":"Drugs in R&D","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; CpG Oligodeoxynucleotide; Toll-like receptor; Immunology; DNA vaccination; Pharmacology; Immune system; Biology; Innate immune system; Immunization; Gene; Genetics","score_opus":0.008426552575936072,"score_gpt":0.2615718066041785,"score_spread":0.25314525402824245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072492830","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011893425,0.9983039,0.00018673674,0.00015479913,0.00046321683,0.000007283348,0.000025293311,0.000007896746,0.00073195883],"genre_scores_gemma":[0.0004664074,0.9976683,0.0003459985,0.00026427268,0.00031266114,0.000008395606,0.000046642363,0.0000017694355,0.0008854293],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998394,0.000025834805,0.000030578467,0.000024656469,0.00006465478,0.000014846833],"domain_scores_gemma":[0.99973124,0.00011004491,0.000047995713,0.000006482431,0.00007512502,0.000029056842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005544315,0.00093834626,0.0016716621,0.0021329375,0.00022686485,0.0007730426,0.0010156565,0.0009386064,0.0037834009],"category_scores_gemma":[0.00059647,0.00031297575,0.00041940372,0.00243348,0.00030443445,0.0012349124,0.00048465503,0.0014041789,0.0025165682],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015932422,0.00009391133,0.00009019968,0.018478569,0.00008903072,0.00028783907,0.000034221088,0.00028268123,0.004672958,0.0014936832,0.057285767,0.9170318],"study_design_scores_gemma":[0.000039123555,0.0001544284,0.00048558242,0.0021173859,0.000116018695,0.0011966203,0.000027061717,0.0000858733,0.00089700194,0.0005968311,0.9942648,0.000019279662],"about_ca_topic_score_codex":0.0008581268,"about_ca_topic_score_gemma":0.0020871547,"teacher_disagreement_score":0.0037834009,"about_ca_system_score_codex":0.0004779698,"about_ca_system_score_gemma":0.00083145726,"threshold_uncertainty_score":0.012656748},"labels":[],"label_agreement":null},{"id":"W2072594666","doi":"10.1186/1471-2350-14-47","title":"Genetic variants of MARCO are associated with susceptibility to pulmonary tuberculosis in a Gambian population","year":2013,"lang":"en","type":"article","venue":"BMC Medical Genetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"National Institute of Allergy and Infectious Diseases; Medical Research Council; National Institutes of Health; Wellcome Trust; McMaster University","keywords":"Tuberculosis; Mycobacterium tuberculosis; Scavenger receptor; Immunology; Biology; Single-nucleotide polymorphism; Population; Latent tuberculosis; Macrophage; Receptor; Gene; Genetics; Medicine; Pathology; Genotype; In vitro; Endocrinology","score_opus":0.01172494202723687,"score_gpt":0.23206589242310305,"score_spread":0.22034095039586618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072594666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993299,0.00020419229,0.000056242436,0.000027037528,0.0000024086912,0.0000073303295,0.00006803135,0.0000030192887,0.00030189264],"genre_scores_gemma":[0.99941695,0.00014261721,0.0001571155,0.000017506627,0.0000035954288,0.000010170016,0.000072064206,0.0000017069257,0.00017820319],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979717,0.00007083249,0.000015218724,0.00005099168,0.000030670428,0.000035086265],"domain_scores_gemma":[0.9997845,0.000045505825,0.00008502799,0.000013564822,0.000020401581,0.00005101512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036063007,0.00077920896,0.00033822213,0.0011606562,0.0008509735,0.0005405095,0.0003101947,0.0005044862,0.0030307728],"category_scores_gemma":[0.0008210334,0.00037906913,0.00020004837,0.0010244957,0.00048192,0.00018517277,0.00040430244,0.0003511059,0.00017817563],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039111456,0.00008661733,0.9893238,0.000042069234,0.000095101495,0.0012774741,0.0010879359,0.00007953564,0.0048723435,0.000113492075,0.00014420817,0.0024862557],"study_design_scores_gemma":[0.000017703367,0.00012191757,0.9969907,0.00004183202,0.000068255074,0.0013999564,0.0006328871,0.00020275182,0.00013212235,0.000057322497,0.00032877148,0.0000057870043],"about_ca_topic_score_codex":0.015421375,"about_ca_topic_score_gemma":0.015168776,"teacher_disagreement_score":0.015421375,"about_ca_system_score_codex":0.00024096224,"about_ca_system_score_gemma":0.0002314974,"threshold_uncertainty_score":0.030663192},"labels":[],"label_agreement":null},{"id":"W2072630610","doi":"10.1016/s0264-410x(02)00694-1","title":"Super-activated interferon-regulatory factors can enhance plasmid immunization","year":2003,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McMaster University","funders":"","keywords":"IRF7; Immunization; Interferon regulatory factors; Biology; Vaccinia; Adjuvant; Virology; Plasmid; Antigen; Interferon; Antibody; Immunology; Recombinant DNA; Immune system; Gene; Genetics","score_opus":0.007594626158211688,"score_gpt":0.2188838416529316,"score_spread":0.2112892154947199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072630610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9782411,0.0028652041,0.012878063,0.0003470117,0.00023855566,0.00019407019,0.0003791193,0.00035561508,0.004501241],"genre_scores_gemma":[0.9903623,0.0008959604,0.0053673997,0.0000891862,0.00005421765,0.00009063873,0.00034263686,0.000056238303,0.0027414833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996381,0.000109157736,0.000017359393,0.00004220584,0.00007992414,0.00011317673],"domain_scores_gemma":[0.9996879,0.00013733482,0.00006286135,0.000043245444,0.00002043384,0.00004830607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046338254,0.00072992087,0.00037773603,0.00065363053,0.00012749607,0.0004242102,0.0002763731,0.0004893095,0.0030665814],"category_scores_gemma":[0.00047990182,0.00017254622,0.00039832943,0.00023190344,0.00031623335,0.00038725772,0.00034558133,0.0013476196,0.00059923995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050914,0.000272549,0.00018944712,0.000069636764,0.000013535592,0.000044998964,0.000020897942,0.00035375162,0.99097353,0.0005273548,0.00014069978,0.006884353],"study_design_scores_gemma":[0.000076287906,0.0012781231,0.0010117065,0.000011641555,0.000039054412,0.00009583651,0.000018077677,0.0015323397,0.9936365,0.00023382086,0.002061673,0.0000049585065],"about_ca_topic_score_codex":0.00020385782,"about_ca_topic_score_gemma":0.00031247904,"teacher_disagreement_score":0.0030665814,"about_ca_system_score_codex":0.00027408518,"about_ca_system_score_gemma":0.00025256813,"threshold_uncertainty_score":0.010258675},"labels":[],"label_agreement":null},{"id":"W2072805330","doi":"10.1126/science.1195491","title":"Intravascular Danger Signals Guide Neutrophils to Sites of Sterile Inflammation","year":2010,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Chemokine; Inflammasome; Innate immune system; Immunology; Integrin; Immune system; Chemotaxis; Endothelium; Biology; Medicine; Receptor; Internal medicine","score_opus":0.007874520171039748,"score_gpt":0.25500191217260443,"score_spread":0.2471273920015647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072805330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95838314,0.0032244762,0.033476043,0.00043559287,0.000038918275,0.000032852895,0.00012538687,0.00020078274,0.004082782],"genre_scores_gemma":[0.9838404,0.0008963885,0.012480308,0.00009273366,0.000022643067,0.000024315039,0.00009951925,0.000020324194,0.0025233708],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998148,0.000041985735,0.000008499558,0.000037071157,0.0000536303,0.00004404228],"domain_scores_gemma":[0.9998344,0.00002479871,0.000039587736,0.000022217848,0.000040522897,0.000038442267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021177084,0.00021693752,0.00018571844,0.00031273448,0.00028262625,0.00057946367,0.00016852592,0.00038424335,0.0007045282],"category_scores_gemma":[0.00028254947,0.00017218957,0.00009062818,0.000133797,0.00031381415,0.00052564597,0.0003443497,0.00061406766,0.00042572466],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112027716,0.000014129031,0.0005354997,0.000020685844,0.0000011899136,0.00008365575,0.0000673412,0.00014876289,0.99122053,0.0017823793,0.00016125654,0.0058526355],"study_design_scores_gemma":[0.000036628862,0.0005054884,0.006625351,0.000026109405,0.000009623937,0.00075327075,0.00021035921,0.0071697515,0.9740611,0.0022251413,0.008357556,0.00001968127],"about_ca_topic_score_codex":0.00040890466,"about_ca_topic_score_gemma":0.0006913741,"teacher_disagreement_score":0.0007045282,"about_ca_system_score_codex":0.0003505873,"about_ca_system_score_gemma":0.00033327306,"threshold_uncertainty_score":0.0025437474},"labels":[],"label_agreement":null},{"id":"W2073697450","doi":"10.1073/pnas.1121423109","title":"Lipid-derived nanoparticles for immunostimulatory RNA adjuvant delivery","year":2012,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; National Institutes of Health","keywords":"TLR7; Adjuvant; Oligonucleotide; Immune system; RNA; Receptor; Toll-like receptor; In vitro; In vivo; Biology; Chemistry; Innate immune system; Immunology; Biochemistry; DNA; Gene","score_opus":0.036932782241590176,"score_gpt":0.28671076977781684,"score_spread":0.24977798753622665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073697450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.920628,0.0072886995,0.06470404,0.00030040965,0.00012722147,0.00037117704,0.00045903033,0.0003861718,0.0057351715],"genre_scores_gemma":[0.95919573,0.0023913435,0.03323965,0.00017624916,0.000017163036,0.00021514128,0.00033417266,0.000037442573,0.004393172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993205,0.000014390692,0.0000049206024,0.000016421214,0.000020902738,0.0000114058175],"domain_scores_gemma":[0.999962,0.000007783815,0.000013382848,0.0000028953925,0.000007010637,0.000006923597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012150725,0.0003695037,0.00018501852,0.00018178484,0.00008470233,0.00018167897,0.00012661709,0.0003512825,0.00068385125],"category_scores_gemma":[0.00009590705,0.00011808968,0.00022020224,0.00009895607,0.000105796054,0.00018261527,0.00020759173,0.00027028093,0.0005670162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028192208,0.000012042884,0.000021217793,0.000049690145,0.0000026003986,0.000026293896,0.0000062562267,0.00022191898,0.99724424,0.00013102726,0.00003191584,0.0022246218],"study_design_scores_gemma":[0.000014056379,0.00029670005,0.00012123129,0.000007792881,0.00001058345,0.00009202882,0.000006165011,0.0011791277,0.9947246,0.00006195794,0.0034807413,0.0000049792457],"about_ca_topic_score_codex":0.00015034719,"about_ca_topic_score_gemma":0.0002578783,"teacher_disagreement_score":0.00068385125,"about_ca_system_score_codex":0.00024748122,"about_ca_system_score_gemma":0.00014380294,"threshold_uncertainty_score":0.0022876859},"labels":[],"label_agreement":null},{"id":"W2073739863","doi":"10.1016/j.antiviral.2014.06.020","title":"Analysis of the transcriptome and immune function of monocytes during IFNα-based therapy in chronic HCV revealed induction of TLR7 responsiveness","year":2014,"lang":"en","type":"article","venue":"Antiviral Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"Sociale en Geesteswetenschappen, NWO; Virgo Consortium; Bristol-Myers Squibb","keywords":"TLR7; Immunology; Immune system; Cytokine; Monocyte; In vivo; Interferon; Biology; Ex vivo; Transcriptome; Medicine; Toll-like receptor; Innate immune system; Gene expression; Gene","score_opus":0.033448616487475644,"score_gpt":0.31304291380127547,"score_spread":0.2795942973137998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073739863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977951,0.0005655872,0.0004776056,0.000045603636,0.000019189933,0.000014559445,0.000526741,0.000008012855,0.00054768537],"genre_scores_gemma":[0.99691534,0.00038867607,0.00038413415,0.00008090823,0.000017401746,0.00005284336,0.0006540003,0.000007517991,0.0014993632],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998116,0.00003617211,0.000010713574,0.000029979497,0.00003273636,0.00007879766],"domain_scores_gemma":[0.9999045,0.0000199556,0.00001891879,0.000011147162,0.000018565433,0.000026852838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001931988,0.000149348,0.00038443092,0.00018163238,0.0002801586,0.00044895604,0.00007015071,0.00026102675,0.0015575382],"category_scores_gemma":[0.0001842239,0.00011544027,0.00027119907,0.00018865835,0.00022000792,0.0001574247,0.00018516483,0.00049654284,0.0003788634],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034243162,0.00006255578,0.0070271417,0.000073294046,0.000018371682,0.00014172545,0.00016131296,0.00009144812,0.9843136,0.00009619814,0.000109642344,0.004480298],"study_design_scores_gemma":[0.00011335456,0.0028872958,0.56941706,0.000078251614,0.00021021857,0.0008955149,0.0019687891,0.0024210075,0.41739243,0.0005269335,0.0040551634,0.000034016422],"about_ca_topic_score_codex":0.00048199645,"about_ca_topic_score_gemma":0.00090841175,"teacher_disagreement_score":0.0015575382,"about_ca_system_score_codex":0.00023761713,"about_ca_system_score_gemma":0.00022942838,"threshold_uncertainty_score":0.005210459},"labels":[],"label_agreement":null},{"id":"W2073743133","doi":"10.1371/journal.pone.0002119","title":"The Nod-Like Receptor (NLR) Family: A Tale of Similarities and Differences","year":2008,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":421,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Österreichischen Akademie der Wissenschaften","keywords":"Biology; Innate immune system; Apoptosome; Protein family; Leucine-rich repeat; Effector; Pyrin domain; Cell biology; Computational biology; Genetics; Pattern recognition receptor; Signal transduction; Receptor; Caspase; Inflammasome; Gene; Programmed cell death","score_opus":0.03520734068416954,"score_gpt":0.19600803292891295,"score_spread":0.16080069224474342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073743133","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23947716,0.56213415,0.110880025,0.034021962,0.0034605977,0.00024956872,0.0014124442,0.0019405317,0.046423495],"genre_scores_gemma":[0.60117644,0.26457533,0.08628249,0.01120156,0.0015645307,0.00020287707,0.0021223626,0.0002137641,0.032660697],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997967,0.00003896545,0.000013141168,0.00004306851,0.00007584024,0.000032364333],"domain_scores_gemma":[0.9998907,0.000015199058,0.000017309963,0.0000125863135,0.000027032764,0.00003718842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005202187,0.0003390229,0.00048034734,0.00048249846,0.00045612192,0.0014053729,0.00055133266,0.0006365117,0.0017274736],"category_scores_gemma":[0.00035417642,0.00012243174,0.0002360829,0.00057405006,0.00084703247,0.0015843704,0.0011832973,0.0012669729,0.0007211909],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006547243,0.00012710821,0.008341663,0.0017298863,0.00021914003,0.0028369727,0.0026965367,0.002074047,0.16250706,0.08812078,0.030301709,0.70039034],"study_design_scores_gemma":[0.000041529573,0.00039003885,0.009208412,0.0004429589,0.00008158982,0.007503305,0.0015790286,0.0019994122,0.012386595,0.049843304,0.9164316,0.00009221246],"about_ca_topic_score_codex":0.00027865992,"about_ca_topic_score_gemma":0.000260927,"teacher_disagreement_score":0.0017274736,"about_ca_system_score_codex":0.00034130807,"about_ca_system_score_gemma":0.00050864427,"threshold_uncertainty_score":0.0057789087},"labels":[],"label_agreement":null},{"id":"W2073788452","doi":"10.1046/j.1365-2567.2001.01189.x","title":"The 3′‐untranslated region of human interleukin‐8 mRNA suppresses IL‐8 gene expression","year":2001,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Untranslated region; Chloramphenicol acetyltransferase; Molecular biology; Gene; Biology; Gene expression; Reporter gene; Messenger RNA; Three prime untranslated region; Regulatory sequence; Regulation of gene expression; Transcription (linguistics); Genetics","score_opus":0.012896549859778441,"score_gpt":0.24423920937784202,"score_spread":0.23134265951806357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073788452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993962,0.0012722322,0.0033331816,0.00009862841,0.0000516254,0.000029986879,0.00010803583,0.00007496752,0.0010693386],"genre_scores_gemma":[0.9923844,0.0007996073,0.0037575632,0.00010793206,0.000026135109,0.0000629911,0.0005424637,0.000027078264,0.002291854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999728,0.000050846756,0.000024032559,0.00004996168,0.0000945695,0.0000525091],"domain_scores_gemma":[0.9998054,0.00007247833,0.000045624056,0.000026143809,0.000018895907,0.00003137954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018211029,0.0003250842,0.00030790886,0.000103251674,0.00010348419,0.00023259234,0.00016845588,0.000217095,0.0008509143],"category_scores_gemma":[0.00018531054,0.00018945186,0.0002773807,0.000087459615,0.000251291,0.0001013342,0.00018441124,0.00064516574,0.00040107802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030017081,0.000016797496,0.000056665333,0.000013622486,0.0000014251465,0.000017330538,0.0000068091554,0.000023542396,0.99927276,0.00003277018,0.000010706239,0.0005175444],"study_design_scores_gemma":[0.000014832417,0.0004587049,0.001295931,0.0000044802814,0.00000683866,0.00014157168,0.00001166448,0.0008255051,0.99561787,0.000022079357,0.0015985529,0.0000019489064],"about_ca_topic_score_codex":0.00020749912,"about_ca_topic_score_gemma":0.00025651438,"teacher_disagreement_score":0.0008509143,"about_ca_system_score_codex":0.00015893995,"about_ca_system_score_gemma":0.0002620084,"threshold_uncertainty_score":0.0028465986},"labels":[],"label_agreement":null},{"id":"W2073947498","doi":"10.1016/j.immuni.2009.06.005","title":"cIAP Proteins: Keystones in NOD Receptor Signal Transduction","year":2009,"lang":"en","type":"letter","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"","keywords":"Nod; Biology; NOD1; Cell biology; Signal transduction; Innate immune system; Ubiquitin; Signal transducing adaptor protein; Function (biology); Immunity; Receptor; NOD2; Immunology; Immune system; Genetics; Gene","score_opus":0.013652230677548633,"score_gpt":0.22977185392147634,"score_spread":0.2161196232439277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2073947498","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004500905,0.026002489,0.0014973108,0.8759267,0.08191839,0.000052391275,0.000115713854,0.00013049599,0.009855674],"genre_scores_gemma":[0.0947562,0.030223457,0.0037773098,0.5752766,0.2540569,0.00026551652,0.0002041963,0.000075586,0.041364223],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999479,0.00014361384,0.000057074234,0.000068629786,0.00016499676,0.000086661494],"domain_scores_gemma":[0.9990722,0.000487975,0.00008902674,0.00005550013,0.000110273555,0.00018497769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012053634,0.0010397438,0.00096848054,0.0003254706,0.0010870674,0.0024193435,0.0009340935,0.014770605,0.004010724],"category_scores_gemma":[0.004275177,0.00041422923,0.00051079126,0.00026297494,0.001836394,0.0025153486,0.0012090707,0.018065449,0.003618058],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010946697,0.000094499344,0.0009006251,0.0002886943,0.00003760584,0.015414126,0.00016731962,0.00025869065,0.0060312836,0.013836166,0.91107726,0.050799157],"study_design_scores_gemma":[0.0005830068,0.00025502517,0.0016382305,0.00017982253,0.000049588572,0.016794367,0.00024204873,0.0014209059,0.0050225724,0.026357993,0.9473941,0.00006229506],"about_ca_topic_score_codex":0.00026379482,"about_ca_topic_score_gemma":0.0003312325,"teacher_disagreement_score":0.014770605,"about_ca_system_score_codex":0.0014774224,"about_ca_system_score_gemma":0.00045592154,"threshold_uncertainty_score":0.013417244},"labels":[],"label_agreement":null},{"id":"W2074334451","doi":"10.1007/s00441-010-1084-3","title":"Innate immunity: complex specificity","year":2010,"lang":"en","type":"editorial","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Innate immune system; Immunity; Molecular medicine; Human genetics; Biology; Computational biology; Immunology; Immune system; Biochemistry; Cell; Gene","score_opus":0.04418270591501013,"score_gpt":0.3480117528901992,"score_spread":0.3038290469751891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074334451","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000050154627,0.023866538,0.00022440756,0.037507918,0.9375117,0.000010435338,0.000018928835,0.00004178345,0.00076811627],"genre_scores_gemma":[0.00068376755,0.0125713255,0.0002083588,0.032679867,0.9467619,0.000018665614,0.00001808626,0.000022363049,0.007035672],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99702126,0.00071071426,0.0003843054,0.00049410097,0.0011354798,0.00025409518],"domain_scores_gemma":[0.9937105,0.0026059828,0.0004082051,0.00032205184,0.0018629093,0.0010903822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0060540866,0.0035749325,0.004042804,0.0021905173,0.0017894146,0.0056930585,0.0032434373,0.013527905,0.0066029266],"category_scores_gemma":[0.008401005,0.0012832218,0.0019094968,0.00096914324,0.0039381296,0.005894857,0.0034965833,0.025664352,0.00460625],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007695797,0.00001117521,0.000032507123,0.00040251613,0.000034856334,0.00017542327,0.000020021655,0.000025036308,0.00033677765,0.0009017839,0.9846363,0.013346517],"study_design_scores_gemma":[0.00008147977,0.00003871457,0.00023977718,0.0003169387,0.000076542434,0.0005389633,0.00003146584,0.000115036026,0.00026985418,0.0019060589,0.99636334,0.000021806312],"about_ca_topic_score_codex":0.00088388054,"about_ca_topic_score_gemma":0.0031196792,"teacher_disagreement_score":0.013527905,"about_ca_system_score_codex":0.002605385,"about_ca_system_score_gemma":0.0019070939,"threshold_uncertainty_score":0.03201747},"labels":[],"label_agreement":null},{"id":"W2074459742","doi":"10.1155/2010/940383","title":"Normal Human Gingival Epithelial Cells Sense<i>C. parapsilosis</i>by Toll-Like Receptors and Module Its Pathogenesis through Antimicrobial Peptides and Proinflammatory Cytokines","year":2010,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Candida parapsilosis; Proinflammatory cytokine; Innate immune system; Downregulation and upregulation; Beta defensin; Biology; Immunology; Receptor; Microbiology; Molecular biology; Immune system; Inflammation; Biochemistry; Candida albicans","score_opus":0.005099702196097653,"score_gpt":0.2081485889057458,"score_spread":0.20304888670964816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074459742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99331987,0.0028704922,0.0014643727,0.00012330554,0.000044068038,0.00004741609,0.00023704836,0.00004589449,0.0018475171],"genre_scores_gemma":[0.9959793,0.0010142868,0.0013349418,0.00009415291,0.000017684431,0.000035630714,0.0003867624,0.0000048865804,0.001132291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998363,0.000028408334,0.000014798668,0.000023505318,0.000049160393,0.00004781937],"domain_scores_gemma":[0.9998754,0.000032406384,0.000034244877,0.000022850807,0.000022769991,0.000012267767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015281729,0.00033674453,0.00025305743,0.00011572099,0.00017684612,0.0004112708,0.00010761061,0.00029087128,0.0010745924],"category_scores_gemma":[0.00016128231,0.00014380775,0.00017140395,0.00015275071,0.00019818306,0.00019867746,0.00019085027,0.00028498107,0.00047737124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013906621,0.00002025043,0.000558097,0.000043571188,0.000002856873,0.00010987286,0.00004637351,0.000029984822,0.99780566,0.000044669498,0.00004832191,0.0011513483],"study_design_scores_gemma":[0.000041281975,0.0012249165,0.02112642,0.000028130095,0.00004327395,0.0016476249,0.00055417867,0.0008444286,0.9687459,0.00020367076,0.005524213,0.000015957961],"about_ca_topic_score_codex":0.0009042511,"about_ca_topic_score_gemma":0.0007484911,"teacher_disagreement_score":0.0010745924,"about_ca_system_score_codex":0.00019772894,"about_ca_system_score_gemma":0.00017348955,"threshold_uncertainty_score":0.0035948157},"labels":[],"label_agreement":null},{"id":"W2074609644","doi":"10.1097/00003246-200208000-00013","title":"Alterations in lymphocyte function and relation to phospholipid composition after burn injury in humans","year":2002,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta; Medical Council of Canada","funders":"","keywords":"Burn injury; Phospholipid; Medicine; Lymphocyte; Total body surface area; CD8; Immune system; Immunology; Internal medicine; Endocrinology; Andrology; Biochemistry; Biology; Surgery; Membrane","score_opus":0.011304761740280679,"score_gpt":0.26454246019216243,"score_spread":0.25323769845188177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074609644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99866843,0.00080220454,0.00014800827,0.000013995373,0.0000028852426,0.000012545563,0.00008800835,0.000004037138,0.0002600251],"genre_scores_gemma":[0.99921215,0.00025356974,0.0001034105,0.000026188667,0.0000062881513,0.000012740996,0.00016204308,0.0000014774747,0.00022202423],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998276,0.0000427231,0.000011633999,0.000040076426,0.00003553247,0.000042371463],"domain_scores_gemma":[0.9997459,0.00004153831,0.000100659854,0.000017951277,0.000037159036,0.0000566933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026952513,0.0003718742,0.00032123865,0.0005632465,0.00030955955,0.00038481574,0.00014087731,0.00038369614,0.0008559537],"category_scores_gemma":[0.0006843435,0.00016313055,0.00015021034,0.00047566518,0.00029082774,0.00023324814,0.00019673018,0.00038789448,0.0002692588],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037795042,0.00022110809,0.97304237,0.00005489458,0.000069484304,0.0005238549,0.00018829179,0.000120505814,0.011650857,0.000024001523,0.00011111452,0.010214019],"study_design_scores_gemma":[0.00001788892,0.0011390187,0.9967674,0.000009746493,0.000025387679,0.00085703935,0.00013264644,0.000106405765,0.0007047985,0.000026054428,0.00020803002,0.000005537355],"about_ca_topic_score_codex":0.001610602,"about_ca_topic_score_gemma":0.0013010405,"teacher_disagreement_score":0.001610602,"about_ca_system_score_codex":0.0002587388,"about_ca_system_score_gemma":0.00015262491,"threshold_uncertainty_score":0.0032023787},"labels":[],"label_agreement":null},{"id":"W2074740959","doi":"10.1016/j.coi.2010.04.010","title":"Nod-like receptors: sentinels at host membranes","year":2010,"lang":"en","type":"review","venue":"Current Opinion in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Innate immune system; Receptor; Biology; Nod; Pattern recognition receptor; Cytosol; Cell biology; Immune system; Immunology; Gene; Biochemistry","score_opus":0.05424258037568792,"score_gpt":0.3448396914576427,"score_spread":0.2905971110819548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2074740959","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019233853,0.99493545,0.00076887035,0.0011933206,0.0016768578,0.0000074033583,0.00003120056,0.00002041382,0.0011742504],"genre_scores_gemma":[0.0011345743,0.99388885,0.0005818995,0.0008784695,0.0015315023,0.000013731727,0.000078692596,0.0000026547812,0.0018896124],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996792,0.00005240249,0.000040963132,0.000059917937,0.00013042551,0.000037165595],"domain_scores_gemma":[0.9995142,0.0001392723,0.00008911941,0.000016108384,0.00014424372,0.00009695201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014178845,0.001729193,0.0018633088,0.0012441297,0.0002494075,0.0017946734,0.0016984044,0.002760463,0.0023626552],"category_scores_gemma":[0.00093845394,0.0004502879,0.00035214156,0.0015522756,0.001215796,0.0038836927,0.0011806103,0.0029522227,0.004323148],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023937064,0.00006942572,0.00023874688,0.008216762,0.000045143875,0.000384833,0.00005240973,0.00041011482,0.010145248,0.0047882507,0.073076375,0.90233326],"study_design_scores_gemma":[0.000035591973,0.00007901826,0.00050037616,0.001026438,0.00004941197,0.0012480258,0.00009055739,0.00015960012,0.0010602656,0.0031479863,0.9925774,0.00002531307],"about_ca_topic_score_codex":0.00032623508,"about_ca_topic_score_gemma":0.00072504586,"teacher_disagreement_score":0.002760463,"about_ca_system_score_codex":0.00079307024,"about_ca_system_score_gemma":0.0009061287,"threshold_uncertainty_score":0.0079039335},"labels":[],"label_agreement":null},{"id":"W2075011079","doi":"10.1016/s0378-1119(02)00795-3","title":"Molecular cloning and expression of gerbil granulocyte/macrophage colony-stimulating factor","year":2002,"lang":"en","type":"article","venue":"Gene","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Biology; Gerbil; Complementary DNA; Molecular biology; Open reading frame; Reverse transcriptase; Cloning (programming); Granulocyte macrophage colony-stimulating factor; Gene; Peptide sequence; Polymerase chain reaction; Biochemistry; Cytokine; Immunology; Internal medicine","score_opus":0.012543712376625138,"score_gpt":0.22136549932046362,"score_spread":0.2088217869438385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075011079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9112859,0.0079959165,0.05967823,0.002155624,0.00068631733,0.0007930101,0.010037441,0.0007962324,0.0065712733],"genre_scores_gemma":[0.8651157,0.0038871807,0.08592207,0.00046317253,0.00012616007,0.0004997876,0.02321052,0.0003032448,0.020472238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997409,0.00003311485,0.000029681187,0.000058794594,0.000056642704,0.00008087442],"domain_scores_gemma":[0.9997675,0.000042518524,0.000043866323,0.00004683572,0.000034324552,0.000064926375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035963755,0.00081778865,0.0005096729,0.0006359739,0.0005332779,0.00057209685,0.00071137,0.00058113266,0.0012348266],"category_scores_gemma":[0.00027891507,0.00048426178,0.0007719109,0.0004357122,0.0006401626,0.00041899632,0.00040734396,0.0017410765,0.0011164396],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018329163,0.00004355439,0.000093081166,0.00005357966,0.0000075748135,0.000097005985,0.0000338542,0.00014815407,0.9969055,0.000953774,0.00014542755,0.0013351184],"study_design_scores_gemma":[0.000046823046,0.00015212304,0.0015617466,0.000017388054,0.000028465964,0.00022799033,0.000038728736,0.00085957354,0.9827623,0.0002372957,0.014057106,0.000010504531],"about_ca_topic_score_codex":0.0015396373,"about_ca_topic_score_gemma":0.0024115809,"teacher_disagreement_score":0.0015396373,"about_ca_system_score_codex":0.0010177129,"about_ca_system_score_gemma":0.00073753326,"threshold_uncertainty_score":0.0073841214},"labels":[],"label_agreement":null},{"id":"W2075031691","doi":"10.1016/j.immuni.2010.08.006","title":"Chemokines: Sirens of Neutrophil Recruitment—but Is It Just One Song?","year":2010,"lang":"en","type":"letter","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Chemokine; Immunology; Cell biology; Inflammation","score_opus":0.11648362322626961,"score_gpt":0.3112070123916828,"score_spread":0.1947233891654132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075031691","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006010294,0.012702993,0.00015550855,0.9471491,0.037391078,0.0000075839903,0.000018901581,0.000028495306,0.001945312],"genre_scores_gemma":[0.010738872,0.009424054,0.00037337607,0.7377715,0.23155978,0.000041745545,0.000021990805,0.000027783719,0.010040855],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980305,0.00074497546,0.00020446288,0.00028580485,0.00045158897,0.00028263894],"domain_scores_gemma":[0.99553275,0.002436213,0.0003978892,0.00018155298,0.0005667823,0.0008847094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022499068,0.0012661363,0.0021479381,0.00046511352,0.0023751727,0.0041232775,0.0013186139,0.031128064,0.004566248],"category_scores_gemma":[0.0119911255,0.00057142,0.0007829432,0.000417897,0.003683045,0.005792456,0.0019436948,0.03407214,0.0036304924],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019005327,0.000046424182,0.00071011565,0.00014981352,0.000034652592,0.0035777208,0.00015340795,0.000041257656,0.00059444184,0.005108127,0.9635485,0.025845563],"study_design_scores_gemma":[0.00033297375,0.00013571199,0.0016079185,0.00040728922,0.00007131959,0.009136337,0.00055758434,0.00045073478,0.0004751673,0.024005981,0.96272886,0.00009020569],"about_ca_topic_score_codex":0.0011361397,"about_ca_topic_score_gemma":0.0020820699,"teacher_disagreement_score":0.031128064,"about_ca_system_score_codex":0.0025743893,"about_ca_system_score_gemma":0.0016150821,"threshold_uncertainty_score":0.018678546},"labels":[],"label_agreement":null},{"id":"W2075271104","doi":"10.3791/52036","title":"Sublingual Immunotherapy as an Alternative to Induce Protection Against Acute Respiratory Infections","year":2014,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Institute Pasteur De Lille; Agencia Nacional de Investigación e Innovación","keywords":"Slit; Medicine; Nasal administration; Immune system; Immunology; Sublingual administration; Bronchoalveolar lavage; Pneumococcal pneumonia; Respiratory tract; Streptococcus pneumoniae; Vaccination; Immunotherapy; Lung; Respiratory system; Biology; Pharmacology; Microbiology; Internal medicine; Antibiotics","score_opus":0.03231528410408949,"score_gpt":0.4126961455330767,"score_spread":0.3803808614289872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075271104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8593801,0.0831822,0.04209822,0.0009624765,0.0008692046,0.00044153532,0.00082362746,0.0016321243,0.010610408],"genre_scores_gemma":[0.929244,0.034322467,0.026282301,0.000647715,0.0003157418,0.0002595003,0.0010305276,0.00010011967,0.007797745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990416,0.000022318321,0.000005380531,0.000017524937,0.000025913838,0.000024804225],"domain_scores_gemma":[0.9999573,0.000007461497,0.00001115243,0.000006865212,0.0000056714402,0.000011444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015263264,0.00037129942,0.0003588769,0.00038851288,0.00011109616,0.00030063157,0.00025757507,0.0003164001,0.00131071],"category_scores_gemma":[0.00006620134,0.00007760897,0.00038819545,0.00014876074,0.00016357009,0.00027529013,0.00020022622,0.00085705996,0.00044125968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002224213,0.00017947223,0.00011388686,0.00026310055,0.000014440437,0.00007506716,0.000017256538,0.00014653278,0.9731503,0.00033621804,0.00033730568,0.025144152],"study_design_scores_gemma":[0.00007578109,0.0052919174,0.0036332835,0.000076207376,0.00012496811,0.0012104339,0.000033068187,0.0012421202,0.9474003,0.00045264792,0.0404434,0.00001585044],"about_ca_topic_score_codex":0.00011960485,"about_ca_topic_score_gemma":0.00019546677,"teacher_disagreement_score":0.00131071,"about_ca_system_score_codex":0.00014101049,"about_ca_system_score_gemma":0.00016757299,"threshold_uncertainty_score":0.004384756},"labels":[],"label_agreement":null},{"id":"W2076038066","doi":"10.1007/s11095-007-9428-8","title":"Influence of Plasma Cholesterol and Triglyceride Concentrations and Eritoran (E5564) Micelle Size on its Plasma Pharmacokinetics and Ex Vivo Activity Following Single Intravenous Bolus Dose Into Healthy Female Rabbits","year":2007,"lang":"en","type":"article","venue":"Pharmaceutical Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"University of British Columbia; Eisai","keywords":"Pharmacokinetics; Triglyceride; Ex vivo; Internal medicine; Pharmacodynamics; Endocrinology; Cholesterol; Pharmacology; In vivo; Bolus (digestion); Chemistry; Blood plasma; Medicine; Biology","score_opus":0.07804843932173165,"score_gpt":0.4022562446270074,"score_spread":0.3242078053052757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076038066","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99755543,0.00068348664,0.0009896926,0.000058767757,0.000033370925,0.000030325082,0.00016097691,0.00004983262,0.00043806995],"genre_scores_gemma":[0.9944534,0.0008089085,0.0010980951,0.00006648631,0.00004902389,0.00007288284,0.0002578456,0.000037285165,0.003156021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969935,0.000061290615,0.000028124974,0.00007706283,0.000042617354,0.00009157305],"domain_scores_gemma":[0.9996406,0.00012374333,0.00009943027,0.00004603705,0.000024913505,0.000065317065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004745787,0.0004919966,0.00055320107,0.00028060237,0.00013431521,0.0004067045,0.00030751812,0.00043500646,0.0010564624],"category_scores_gemma":[0.0005975492,0.00029241253,0.0003696992,0.00019051012,0.0005517653,0.0006863804,0.00016398847,0.00083384465,0.000417708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.029766122,0.0009830948,0.0005995627,0.00006964168,0.00004429533,0.00012559879,0.00010768164,0.00038698406,0.9581608,0.00017863908,0.00010690063,0.009470528],"study_design_scores_gemma":[0.00042241425,0.012433734,0.0030829245,0.000005878146,0.00010412768,0.00011668966,0.000037874663,0.0011501616,0.9817199,0.00008370597,0.00082474505,0.000017866001],"about_ca_topic_score_codex":0.0006467877,"about_ca_topic_score_gemma":0.0006185321,"teacher_disagreement_score":0.0010564624,"about_ca_system_score_codex":0.00027814443,"about_ca_system_score_gemma":0.00028622957,"threshold_uncertainty_score":0.0035341978},"labels":[],"label_agreement":null},{"id":"W2076080662","doi":"10.1016/j.cardiores.2006.09.011","title":"Toll-like receptor stimulation in cardiomyoctes decreases contractility and initiates an NF-κB dependent inflammatory response☆","year":2006,"lang":"en","type":"article","venue":"Cardiovascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":372,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"TLR5; TLR4; Toll-like receptor; TLR2; Receptor; Pyrrolidine dithiocarbamate; Cell biology; Biology; Signal transduction; TLR3; Inflammation; Chemistry; NF-κB; Immunology; Innate immune system; Biochemistry","score_opus":0.030845296901235726,"score_gpt":0.30156590112914966,"score_spread":0.27072060422791394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076080662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988236,0.005518109,0.00337368,0.00027830843,0.00017952893,0.000039727936,0.00038597203,0.00007689947,0.0019116635],"genre_scores_gemma":[0.9896672,0.0027320473,0.0026755433,0.0001794898,0.000074494965,0.00013458866,0.0005461,0.0000135644705,0.0039770016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997675,0.000046718484,0.00002191126,0.00003928752,0.000058038386,0.00006650041],"domain_scores_gemma":[0.9998814,0.000026720554,0.000039049854,0.000012251565,0.000011107343,0.000029393845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002522115,0.00040695776,0.00023577923,0.00012243699,0.00013239765,0.00018867743,0.0001265769,0.00027346317,0.003449656],"category_scores_gemma":[0.00016822554,0.00012886168,0.0003016545,0.00007909926,0.00019771123,0.0001681593,0.0002072903,0.00052036624,0.0007019553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002518378,0.000028204831,0.0002663603,0.00009994141,0.000005773598,0.00007451677,0.0000069189086,0.000023504563,0.9982009,0.000032448395,0.000048592497,0.00096093304],"study_design_scores_gemma":[0.00006939927,0.001028693,0.0098242955,0.000034860986,0.00002223857,0.00056427746,0.00006025369,0.00047393105,0.98546857,0.000049016133,0.0023991675,0.0000053060903],"about_ca_topic_score_codex":0.00005649125,"about_ca_topic_score_gemma":0.00010160657,"teacher_disagreement_score":0.003449656,"about_ca_system_score_codex":0.00013762392,"about_ca_system_score_gemma":0.000114409595,"threshold_uncertainty_score":0.011540234},"labels":[],"label_agreement":null},{"id":"W2076129476","doi":"10.1152/ajpgi.00089.2010","title":"Oxidative stress enhances IL-8 and inhibits CCL20 production from intestinal epithelial cells in response to bacterial flagellin","year":2010,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Flagellin; TLR5; CCL20; Cell biology; p38 mitogen-activated protein kinases; Chemokine; Interleukin 8; Innate immune system; Biology; Interleukin 22; Signal transduction; Oxidative stress; Kinase; Immune system; Protein kinase A; TLR4; Microbiology; Chemokine receptor; TLR2; Immunology; Inflammation; Receptor; Cytokine; Interleukin; Biochemistry","score_opus":0.005054568755966181,"score_gpt":0.2120876941301693,"score_spread":0.20703312537420313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076129476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952543,0.0029833359,0.0005475869,0.00012844893,0.00006018391,0.000030747495,0.0002099167,0.000037092806,0.00074844324],"genre_scores_gemma":[0.9960079,0.0011960752,0.00060214754,0.00014136064,0.00005384169,0.00006405406,0.00039741115,0.000008969234,0.0015281748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997012,0.00005469964,0.00002477125,0.000038021743,0.000064951106,0.000116264004],"domain_scores_gemma":[0.9997702,0.000030003026,0.00006129525,0.000024784258,0.000038271613,0.000075479555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022668365,0.0005241143,0.00049588515,0.00025318968,0.00018093352,0.00040038087,0.00015820026,0.00032616762,0.0013052225],"category_scores_gemma":[0.00019805235,0.0001966951,0.00044114253,0.00016416135,0.00027387985,0.000297752,0.0002654104,0.0004315634,0.00033613786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004963483,0.00005465137,0.00026504698,0.00005644866,0.0000054390384,0.00005492689,0.000023709845,0.000021869379,0.9982791,0.000013251932,0.000043902764,0.0006852567],"study_design_scores_gemma":[0.00011179001,0.0017046217,0.030912349,0.000021225014,0.000030272193,0.0002530281,0.0001271159,0.00069152436,0.96349186,0.00005477134,0.002589718,0.00001175163],"about_ca_topic_score_codex":0.00060866884,"about_ca_topic_score_gemma":0.0010225967,"teacher_disagreement_score":0.0013052225,"about_ca_system_score_codex":0.00033676944,"about_ca_system_score_gemma":0.00023545664,"threshold_uncertainty_score":0.004366398},"labels":[],"label_agreement":null},{"id":"W2076360156","doi":"10.1111/j.1365-3083.2009.02232.x","title":"Differential Activation of Dendritic Cells by Toll‐like Receptor Agonists Isolated from the Gram‐positive Vaccine Vector <i>Streptococcus gordonii</i>","year":2009,"lang":"en","type":"article","venue":"Scandinavian Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Streptococcus gordonii; TRIF; Biology; Cell biology; Toll-like receptor; Microbiology; Innate immune system; Immune system; Immunology; Streptococcaceae","score_opus":0.0040567320524994175,"score_gpt":0.20710786444783416,"score_spread":0.20305113239533473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076360156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976376,0.0003747005,0.00089459546,0.000043397904,0.000024488667,0.000025748308,0.0001743164,0.00001859632,0.0008065749],"genre_scores_gemma":[0.9956489,0.0004520659,0.0022051998,0.00007084028,0.000011125302,0.000037332695,0.00047660508,0.000010749335,0.001087057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982625,0.00003180999,0.000021980488,0.000026545813,0.000041103514,0.000052368527],"domain_scores_gemma":[0.999938,0.000010888679,0.00001391799,0.000008416318,0.000010222911,0.000018458803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012508476,0.00026091255,0.00019697944,0.00012270313,0.00008418472,0.00023763845,0.000090796944,0.00020236142,0.0005536017],"category_scores_gemma":[0.00009331939,0.000094278315,0.00018330714,0.00011466057,0.00013116118,0.000109856024,0.00014910284,0.00043302015,0.00023480113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051088275,0.000009035211,0.00008963553,0.000008907875,8.747765e-7,0.000009948632,0.000003531467,0.000009508972,0.9995401,0.000011719615,0.000006048249,0.00025966103],"study_design_scores_gemma":[0.000014676709,0.00036640547,0.0030880235,0.0000038451954,0.000009646558,0.00010246429,0.000025583699,0.00026375242,0.9951983,0.000017847393,0.0009073117,0.0000020927007],"about_ca_topic_score_codex":0.00021990243,"about_ca_topic_score_gemma":0.0004503583,"teacher_disagreement_score":0.0005536017,"about_ca_system_score_codex":0.00017110593,"about_ca_system_score_gemma":0.00015672496,"threshold_uncertainty_score":0.0018519759},"labels":[],"label_agreement":null},{"id":"W2076654194","doi":"10.1155/2014/917149","title":"Antagonizing Arachidonic Acid-Derived Eicosanoids Reduces Inflammatory Th17 and Th1 Cell-Mediated Inflammation and Colitis Severity","year":2014,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; National Cancer Institute; Cooperative State Research, Education, and Extension Service; National Institutes of Health; Cancer Prevention and Research Institute of Texas; U.S. Department of Agriculture","keywords":"Colitis; Arachidonic acid; Eicosanoid; Inflammation; Polyunsaturated fatty acid; Prostaglandin E2; Inflammatory bowel disease; Prostaglandin; Biology; Immunology; Chemistry; Endocrinology; Biochemistry; Fatty acid; Internal medicine; Medicine; Enzyme; Disease","score_opus":0.004714538042795346,"score_gpt":0.20001532267786507,"score_spread":0.19530078463506972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076654194","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946814,0.0016440526,0.0016087525,0.00012667455,0.00007458135,0.0000833687,0.00046228067,0.00017573574,0.0011430448],"genre_scores_gemma":[0.9892396,0.0018073277,0.0028324835,0.000110810484,0.00003154844,0.00018759954,0.000838402,0.000050893326,0.0049013067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995431,0.00005190904,0.000052563817,0.00007705446,0.00012616599,0.00014923],"domain_scores_gemma":[0.9994844,0.0000428424,0.00013944985,0.000038130267,0.0000426757,0.00025255873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024235829,0.00068653247,0.00068346364,0.00084389787,0.00019500121,0.00040056964,0.00035407956,0.00059227936,0.0019761107],"category_scores_gemma":[0.00024404938,0.00030158777,0.0004401726,0.00028664712,0.00039789188,0.00030737979,0.000299201,0.0015504152,0.00037782194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011685748,0.0003651561,0.00031417556,0.000087694694,0.000018848179,0.000031320284,0.00002279823,0.000093005205,0.9952591,0.00005423176,0.00006537719,0.0025198103],"study_design_scores_gemma":[0.00024776004,0.0073472755,0.012349484,0.000050050694,0.000121937286,0.00026405,0.00012665983,0.0011503467,0.97496367,0.00009930548,0.0032570085,0.000022480323],"about_ca_topic_score_codex":0.0009218938,"about_ca_topic_score_gemma":0.0018786518,"teacher_disagreement_score":0.0019761107,"about_ca_system_score_codex":0.0002659999,"about_ca_system_score_gemma":0.00044289432,"threshold_uncertainty_score":0.006610751},"labels":[],"label_agreement":null},{"id":"W2076748557","doi":"10.1016/j.cytogfr.2014.02.002","title":"The Lymphotoxin Network: Orchestrating a Type I interferon response to optimize adaptive immunity","year":2014,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; National Cancer Institute; National Institute for Health and Care Research","keywords":"Lymphotoxin; Immunology; Biology; Lymphotoxin beta receptor; Acquired immune system; Immune system; Interferon; Chemokine; CD8; T cell; Cell biology; Homeostasis","score_opus":0.06546538685805411,"score_gpt":0.3260525939310803,"score_spread":0.2605872070730262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076748557","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024877922,0.99672264,0.00060215255,0.0005446892,0.0007015822,0.0000059430886,0.000020307274,0.00001660583,0.0011372734],"genre_scores_gemma":[0.0016579691,0.9959896,0.0004155134,0.00026693972,0.00050388055,0.000008624574,0.000037973212,0.0000031528834,0.0011162694],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983,0.000021800282,0.00001670198,0.000030410261,0.00007220836,0.000028853538],"domain_scores_gemma":[0.9997801,0.00006458254,0.00004329037,0.0000070324418,0.000058356254,0.000046608886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005306066,0.0010009506,0.0010546062,0.00090046984,0.00018353012,0.0013266703,0.000763141,0.0011115278,0.0023129818],"category_scores_gemma":[0.0004984059,0.00022863614,0.00024948764,0.0011062151,0.0006356448,0.0013224354,0.0008817557,0.0017171967,0.002046498],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001128256,0.000043926226,0.00018371863,0.0047502485,0.000042921773,0.00013289097,0.000033206907,0.00040202073,0.010417903,0.006170649,0.034385838,0.9433238],"study_design_scores_gemma":[0.000024962672,0.00007949805,0.000635851,0.0009861641,0.00004982272,0.0005164457,0.000054930053,0.00015478766,0.0017172021,0.003521144,0.9922429,0.000016237756],"about_ca_topic_score_codex":0.00037215278,"about_ca_topic_score_gemma":0.000743514,"teacher_disagreement_score":0.0023129818,"about_ca_system_score_codex":0.000691274,"about_ca_system_score_gemma":0.001142522,"threshold_uncertainty_score":0.007737696},"labels":[],"label_agreement":null},{"id":"W2076849320","doi":"10.1097/01.ccm.0000190622.02222.df","title":"Endotoxin-induced heart dysfunction in rats: Assessment of myocardial perfusion and permeability and the role of fluid resuscitation*","year":2005,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Medicine; Resuscitation; Perfusion; Internal medicine; Cardiology; Shock (circulatory); Septic shock; Ejection fraction; Saline; Sepsis; Troponin; Hemodynamics; Anesthesia; Myocardial infarction; Heart failure","score_opus":0.00920727819752643,"score_gpt":0.28717178891407946,"score_spread":0.27796451071655304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076849320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976407,0.00060857105,0.0011738309,0.00005054721,0.000026598049,0.00004848577,0.0001344817,0.000042704152,0.0002740639],"genre_scores_gemma":[0.9934127,0.0011591485,0.0033246602,0.00009567405,0.000028173943,0.00028085295,0.00036414756,0.000020418744,0.0013142648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997502,0.000046350848,0.000024440838,0.000046895424,0.0000546482,0.000077415316],"domain_scores_gemma":[0.9996024,0.000039258182,0.00015732175,0.000044545122,0.000033845703,0.00012267336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003663045,0.00089996,0.0005326041,0.0004387027,0.00020001078,0.0002230122,0.00022615517,0.0005456598,0.0018644335],"category_scores_gemma":[0.0002462986,0.00028206847,0.00036456698,0.00020079287,0.000633682,0.0004209035,0.00031467338,0.0009955819,0.00024920522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006240801,0.0010662923,0.0023905232,0.00011972142,0.000023919565,0.0002498609,0.000085358995,0.00022028938,0.9858015,0.00007785987,0.00005615919,0.0036676528],"study_design_scores_gemma":[0.0004088394,0.041914754,0.03061792,0.000028537006,0.00011125469,0.00061346794,0.00019554356,0.0014135722,0.9236156,0.0001261584,0.0009251816,0.000029279674],"about_ca_topic_score_codex":0.0002573156,"about_ca_topic_score_gemma":0.00033222872,"teacher_disagreement_score":0.0018644335,"about_ca_system_score_codex":0.0002220807,"about_ca_system_score_gemma":0.0002682546,"threshold_uncertainty_score":0.0062371492},"labels":[],"label_agreement":null},{"id":"W2076890629","doi":"10.1016/j.ebiom.2014.10.003","title":"An Endotoxin Tolerance Signature Predicts Sepsis and Organ Dysfunction at Initial Clinical Presentation","year":2014,"lang":"en","type":"article","venue":"EBioMedicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":151,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Canadian HIV Trials Network, Canadian Institutes of Health Research; Wellcome Trust","keywords":"Sepsis; Immunology; Organ dysfunction; Medicine; Pathogenesis; Immune system; Reprogramming; Disease; Biology; Internal medicine; Gene; Genetics","score_opus":0.011949440524162155,"score_gpt":0.29957098897590523,"score_spread":0.2876215484517431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2076890629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992887,0.00012034079,0.0002914102,0.000023177752,0.00000470207,0.000005676373,0.00012957233,0.0000035089147,0.00013294659],"genre_scores_gemma":[0.99943334,0.000037183003,0.0002286314,0.000015692991,0.0000068902245,0.00000766236,0.00022861287,0.0000013835465,0.000040544437],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999716,0.000070353686,0.00003688413,0.000083401545,0.00004431201,0.000049039805],"domain_scores_gemma":[0.9986411,0.00041270145,0.0005151814,0.000063144435,0.00011530759,0.00025244983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056815986,0.00025721383,0.00044348807,0.00051048707,0.00018309071,0.00048189863,0.00017796288,0.00040611016,0.0014623362],"category_scores_gemma":[0.0018651107,0.000095837204,0.0002586749,0.0004645922,0.0002633631,0.0002502211,0.0003716103,0.000464627,0.00024166534],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005815828,0.00003942651,0.9896969,0.000014522405,0.000027969934,0.00009935201,0.00003081879,0.00012531668,0.0072035384,0.000018208022,0.00005883594,0.0021035036],"study_design_scores_gemma":[0.000011561226,0.0002970423,0.9973889,0.0000054775505,0.000032037853,0.00045789944,0.00006374132,0.00063890766,0.0009397059,0.00006511495,0.00009466954,0.0000050081376],"about_ca_topic_score_codex":0.0002232869,"about_ca_topic_score_gemma":0.00020790828,"teacher_disagreement_score":0.0014623362,"about_ca_system_score_codex":0.00017493722,"about_ca_system_score_gemma":0.00019422204,"threshold_uncertainty_score":0.0048919916},"labels":[],"label_agreement":null},{"id":"W2077137690","doi":"10.1016/j.dci.2003.09.010","title":"Regulation of myeloid development and function by colony stimulating factors","year":2003,"lang":"en","type":"review","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":395,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Haematopoiesis; Colony-stimulating factor; Cell biology; Myelopoiesis; Receptor; Progenitor cell; Macrophage colony-stimulating factor; Myeloid; Immune system; Immunology; Granulocyte macrophage colony-stimulating factor; Cytokine; Stem cell; Macrophage; Genetics; In vitro","score_opus":0.05476115052898377,"score_gpt":0.30103764024766855,"score_spread":0.24627648971868477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077137690","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005194822,0.9958079,0.00073494104,0.00029723856,0.00056706846,0.000008613112,0.000031528656,0.00002394629,0.0020091424],"genre_scores_gemma":[0.0024103182,0.9939209,0.0007479029,0.00022338278,0.00044781345,0.00001761207,0.000082823724,0.0000046311416,0.0021446159],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985504,0.000013594024,0.000020919397,0.000031417872,0.00006005858,0.000018913634],"domain_scores_gemma":[0.9998037,0.000056784727,0.000034574467,0.000010679572,0.00006029802,0.00003399967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005345341,0.001128101,0.0012268896,0.001047948,0.0002670038,0.0011341112,0.0012586951,0.0008843034,0.0020149462],"category_scores_gemma":[0.0004451883,0.0002905459,0.0002356033,0.0014326144,0.00072602765,0.0010625543,0.0006503354,0.0018070303,0.0021285343],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019512723,0.000052163978,0.00020420452,0.0041389135,0.000035324738,0.00038640536,0.000052529806,0.00045737834,0.020759683,0.0043207575,0.023796916,0.9456007],"study_design_scores_gemma":[0.000033595392,0.000066471635,0.0010560307,0.00057241344,0.000060253933,0.001113028,0.00005397755,0.000103442115,0.004960387,0.0018899447,0.99007434,0.00001624008],"about_ca_topic_score_codex":0.0009877251,"about_ca_topic_score_gemma":0.0016910423,"teacher_disagreement_score":0.0020149462,"about_ca_system_score_codex":0.00080275384,"about_ca_system_score_gemma":0.0008127193,"threshold_uncertainty_score":0.0067406297},"labels":[],"label_agreement":null},{"id":"W2077581494","doi":"10.1016/j.antiviral.2012.08.012","title":"WFDC1/ps20: A host factor that influences the neutrophil response to murine hepatitis virus (MHV) 1 infection","year":2012,"lang":"en","type":"article","venue":"Antiviral Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canada Research Chairs; University Health Network","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research","keywords":"CXCL1; Biology; Immunology; Immune system; Microbiology; Virology; Chemokine","score_opus":0.07389450539630842,"score_gpt":0.36413159282337065,"score_spread":0.2902370874270622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077581494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979108,0.0005149225,0.00062641443,0.00007489681,0.000018357876,0.000012165841,0.00018908088,0.00002949987,0.00062391633],"genre_scores_gemma":[0.9975172,0.00032828012,0.0007419017,0.00003414346,0.000012601495,0.000011275146,0.00030504086,0.000019057037,0.0010305169],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998808,0.000023311804,0.000008133062,0.00001812878,0.000025230021,0.000044334327],"domain_scores_gemma":[0.99987936,0.00002373402,0.000025523545,0.000011531758,0.0000074863747,0.000052333966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001498677,0.00032635612,0.00016966632,0.0002791947,0.00024904322,0.00031695623,0.00019594746,0.000221252,0.0011483447],"category_scores_gemma":[0.00018130415,0.00011774729,0.00012820156,0.0001277325,0.00029510338,0.00022061351,0.00016680222,0.00050951965,0.00028210398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028463334,0.000038957733,0.00021400246,0.000010901408,0.0000012822238,0.000040180203,0.0000057127595,0.00006153157,0.9986305,0.000070895185,0.000034489334,0.00060690666],"study_design_scores_gemma":[0.00005090784,0.00034843484,0.00746903,0.000005845723,0.000012028288,0.00031718484,0.000039539074,0.0014873855,0.98892736,0.00010031774,0.0012359893,0.000005987827],"about_ca_topic_score_codex":0.0007949148,"about_ca_topic_score_gemma":0.0013349641,"teacher_disagreement_score":0.0011483447,"about_ca_system_score_codex":0.000510544,"about_ca_system_score_gemma":0.00023707065,"threshold_uncertainty_score":0.003841579},"labels":[],"label_agreement":null},{"id":"W2077948592","doi":"10.3389/fimmu.2012.00243","title":"Lymphotoxin-sensitive microenvironments in homeostasis and inflammation","year":2012,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Multiple Sclerosis Society; Multiple Sclerosis Society of Canada","keywords":"Stromal cell; Lymphotoxin; Cell biology; Biology; Inflammation; Immune system; Lymphatic system; Lymphotoxin beta receptor; T cell; Immunology; Lymph node stromal cell; Innate lymphoid cell; Homeostasis; Cancer research; Acquired immune system","score_opus":0.0052910930115369625,"score_gpt":0.19853189526920229,"score_spread":0.19324080225766532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2077948592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73775285,0.22543758,0.016511755,0.00308655,0.00034518781,0.000033946348,0.0001525173,0.00018504397,0.016494514],"genre_scores_gemma":[0.96842986,0.026761359,0.0015436556,0.0002211584,0.00015574481,0.000015129859,0.00005390822,0.000010031375,0.0028092226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969304,0.000096847725,0.00002051834,0.00004226536,0.000051035993,0.00009641092],"domain_scores_gemma":[0.9998198,0.000029794819,0.00006903793,0.000012041388,0.00001643234,0.000052895728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002613248,0.00028990922,0.00030264514,0.00030420235,0.00027690455,0.0011523552,0.00019795095,0.0005891324,0.0006921026],"category_scores_gemma":[0.00020354571,0.00011868675,0.0001458178,0.00025051663,0.00077285856,0.0010728181,0.0009066797,0.00061011617,0.00023634324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042818743,0.00006660139,0.0050329883,0.000585549,0.000020837544,0.002782956,0.00067955675,0.0011061787,0.92163515,0.0330426,0.0007622707,0.033857077],"study_design_scores_gemma":[0.00010443539,0.0020574585,0.12918606,0.00066833326,0.00009536504,0.014353878,0.0051644156,0.006459384,0.5645281,0.09945037,0.17778786,0.00014429813],"about_ca_topic_score_codex":0.0001430667,"about_ca_topic_score_gemma":0.00024312388,"teacher_disagreement_score":0.0011523552,"about_ca_system_score_codex":0.00042695977,"about_ca_system_score_gemma":0.00018661699,"threshold_uncertainty_score":0.0030978322},"labels":[],"label_agreement":null},{"id":"W2078167612","doi":"10.1038/nm0210-160","title":"Gut microbes extend reach to systemic innate immunity","year":2010,"lang":"en","type":"letter","venue":"Nature Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Innate immune system; Immunity; Biology; Function (biology); Systemic circulation; Immunology; Microbiology; Immune system; Cell biology; Medicine","score_opus":0.006765774451707825,"score_gpt":0.2565284842901971,"score_spread":0.24976270983848928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078167612","genre_codex":"commentary","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00057940756,0.0044696652,0.00026220584,0.9502819,0.039725326,0.000008985651,0.000031344378,0.000044704768,0.004596382],"genre_scores_gemma":[0.012520206,0.004350782,0.00053342944,0.87971616,0.08823457,0.00004964128,0.000026714315,0.000027254098,0.0145412525],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989668,0.0003000762,0.000081030514,0.00014134006,0.0003295375,0.00018127233],"domain_scores_gemma":[0.99653995,0.0022623998,0.00017393276,0.00016184016,0.00041770964,0.00044420283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014641316,0.0008354122,0.001407339,0.00038773977,0.0023156009,0.0027460037,0.0008823184,0.031088527,0.006935577],"category_scores_gemma":[0.00992945,0.000502055,0.0008824853,0.00024973726,0.0027706677,0.0030745892,0.0017699123,0.041955873,0.005373312],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022617208,0.000043811644,0.00038393412,0.000110004425,0.000022474085,0.0028175802,0.00009321338,0.000080930986,0.0006596619,0.0068709967,0.96854335,0.020147983],"study_design_scores_gemma":[0.00036165296,0.0001584035,0.0011214653,0.0003030159,0.00006155859,0.004345373,0.00023827876,0.00079345994,0.001007245,0.037886996,0.9536639,0.00005857672],"about_ca_topic_score_codex":0.0011406809,"about_ca_topic_score_gemma":0.0026294258,"teacher_disagreement_score":0.031088527,"about_ca_system_score_codex":0.0026377698,"about_ca_system_score_gemma":0.0013429628,"threshold_uncertainty_score":0.023201764},"labels":[],"label_agreement":null},{"id":"W2078370139","doi":"10.1016/j.tvjl.2011.12.020","title":"Immunophenotypic evaluation of working Labrador Retrievers and German Shepherd dogs living in the same environment","year":2012,"lang":"en","type":"article","venue":"The Veterinary Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Ministerio de Ciencia e Innovación","keywords":"Breed; Lymphocyte subsets; Peripheral blood; CD8; Lymphocyte; Labrador Retriever; Flow cytometry; CD3; Immune system; Biology; Distribution (mathematics); Peripheral blood lymphocyte; Immunology; Animal science; Medicine; Pathology","score_opus":0.05180916397271421,"score_gpt":0.2798670787309388,"score_spread":0.2280579147582246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078370139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996767,0.00003547686,0.000019994215,0.0000035685086,0.0000014460877,0.000002489945,0.000018731684,5.294402e-7,0.00024106534],"genre_scores_gemma":[0.99944633,0.00007104383,0.00006237469,0.000015458458,0.0000033288825,0.0000040994873,0.00008914956,0.0000012155065,0.0003069104],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998092,0.00003539575,0.000015199385,0.00004372376,0.000028340646,0.00006808748],"domain_scores_gemma":[0.9997962,0.000027208742,0.000049077942,0.000015050361,0.000044141285,0.00006839181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002880756,0.00032344574,0.00025288304,0.0009937198,0.0005808032,0.00049509713,0.00022047156,0.00046468986,0.0010525495],"category_scores_gemma":[0.00035880963,0.0001537426,0.0002369963,0.0004187917,0.0006518805,0.00028164312,0.0003152355,0.0001902988,0.0002734848],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022027562,0.00042068408,0.8167345,0.00007288174,0.00009180619,0.008720387,0.005731098,0.00011473979,0.16082247,0.00015323615,0.00015961917,0.0047758534],"study_design_scores_gemma":[0.000010605015,0.0015128658,0.9805462,0.000009935762,0.000060067865,0.0055348305,0.0057486566,0.00012199635,0.005809125,0.000045032535,0.0005917663,0.000008870571],"about_ca_topic_score_codex":0.0027332457,"about_ca_topic_score_gemma":0.0033490257,"teacher_disagreement_score":0.0027332457,"about_ca_system_score_codex":0.00022803483,"about_ca_system_score_gemma":0.00013126478,"threshold_uncertainty_score":0.0054346323},"labels":[],"label_agreement":null},{"id":"W2078395832","doi":"10.1016/j.dci.2010.02.006","title":"Differential gene expression of γ-actin, Toll-like receptor 2 (TLR-2) and interleukin-1 receptor-associated kinase 4 (IRAK-4) in Mya arenaria haemocytes induced by in vivo infections with two Vibrio splendidus strains","year":2010,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Immune system; Microbiology; Housekeeping gene; Gene; Receptor; In vivo; Gene expression; Molecular biology; Interleukin 10; Immunology; Genetics","score_opus":0.01436681315296253,"score_gpt":0.25370153548614405,"score_spread":0.2393347223331815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078395832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756324,0.00022315209,0.0006808251,0.000036082165,0.000027069329,0.000018693134,0.0005226961,0.000024812605,0.00090328604],"genre_scores_gemma":[0.99318093,0.00026295506,0.0011918783,0.00006495189,0.000029647916,0.00008623153,0.00094062823,0.000017622506,0.004225068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998043,0.000022955943,0.000016097549,0.00004618647,0.00003481749,0.000075663826],"domain_scores_gemma":[0.99975747,0.000062667954,0.00006068526,0.000023310884,0.000034586952,0.00006134295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012071685,0.00042542894,0.00032342385,0.00038807347,0.00019487481,0.00035741416,0.0001737864,0.000461294,0.001662492],"category_scores_gemma":[0.00016842343,0.00023775766,0.0003467896,0.00024553097,0.00037275653,0.00024576587,0.00024287296,0.0007126321,0.00033695632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113004084,0.000010164306,0.00013604648,0.000008944377,0.0000013076462,0.000018445615,0.000014105445,0.000007232002,0.9995629,0.000018549112,0.0000037862942,0.00010548961],"study_design_scores_gemma":[0.000033707187,0.00079030544,0.047773857,0.000006966015,0.000033228942,0.0002419338,0.00021194818,0.0004237377,0.94977325,0.00011354575,0.0005868651,0.000010677888],"about_ca_topic_score_codex":0.00029777273,"about_ca_topic_score_gemma":0.00039745343,"teacher_disagreement_score":0.001662492,"about_ca_system_score_codex":0.0002051645,"about_ca_system_score_gemma":0.00015127889,"threshold_uncertainty_score":0.00556159},"labels":[],"label_agreement":null},{"id":"W2078402906","doi":"10.1016/j.cellimm.2004.01.004","title":"CpG oligodeoxynucleotide induction of antiviral effector molecules in sheep","year":2004,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"CpG Oligodeoxynucleotide; Biology; In vivo; CpG site; Effector; Peripheral blood mononuclear cell; Interferon; Immunology; Molecular biology; In vitro; Biochemistry; Gene expression","score_opus":0.005782922028143605,"score_gpt":0.20351073150225393,"score_spread":0.19772780947411034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078402906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99689204,0.000713331,0.0009929646,0.000045888628,0.000027949816,0.000012359583,0.00012601702,0.000026136955,0.001163302],"genre_scores_gemma":[0.9951532,0.0004419925,0.0008341799,0.000048448477,0.000016389355,0.000026610944,0.0002493972,0.000015058588,0.0032147577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998627,0.000030277444,0.000012964274,0.00003874498,0.000021547417,0.000033663153],"domain_scores_gemma":[0.9997049,0.00012498873,0.00005152727,0.000041665386,0.000028750088,0.000048271337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019187425,0.00023517977,0.0003096493,0.00026940618,0.000105313724,0.00022683824,0.00017972889,0.00040965452,0.0010377804],"category_scores_gemma":[0.00029724004,0.00016889656,0.0002025224,0.00007756591,0.00027912683,0.00016346671,0.00013922353,0.0007231692,0.00047059153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050318637,0.00003306521,0.0004218451,0.00004086733,0.0000033459614,0.00013486945,0.000035544028,0.000038402617,0.99710244,0.00009100651,0.00002590768,0.0015695442],"study_design_scores_gemma":[0.00007521395,0.002195944,0.009211291,0.00002671141,0.000038867285,0.0008640886,0.00013371599,0.0005835586,0.983887,0.00026110827,0.0027142966,0.000008305675],"about_ca_topic_score_codex":0.00030239942,"about_ca_topic_score_gemma":0.00037367913,"teacher_disagreement_score":0.0010377804,"about_ca_system_score_codex":0.00018827217,"about_ca_system_score_gemma":0.00013037499,"threshold_uncertainty_score":0.0034717321},"labels":[],"label_agreement":null},{"id":"W2078468171","doi":"10.1097/00024382-200116050-00007","title":"ANTIOXIDANTS INCREASE LIPOPOLYSACCHARIDE-STIMULATED TNFα RELEASE IN MURINE MACROPHAGES: ROLE FOR ALTERED TNFα mRNA STABILITY","year":2001,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; University of Toronto; Toronto General Hospital","funders":"","keywords":"Pyrrolidine dithiocarbamate; Tumor necrosis factor alpha; Molecular biology; Proinflammatory cytokine; Cytokine; NFKB1; Chemistry; Gene expression; Biology; Cell biology; NF-κB; Inflammation; Transcription factor; Immunology; Signal transduction; Biochemistry; Gene","score_opus":0.014372259689242701,"score_gpt":0.25125526385118185,"score_spread":0.23688300416193916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078468171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909764,0.005693013,0.00218657,0.0001282931,0.00006132771,0.000046050798,0.00032226287,0.00007286228,0.0005133442],"genre_scores_gemma":[0.99058694,0.0027941172,0.003502668,0.00013434078,0.000059591483,0.00008303241,0.00056598324,0.00003911811,0.0022341309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998217,0.0000391681,0.000024952738,0.000034691948,0.00003985292,0.000039695275],"domain_scores_gemma":[0.99957615,0.0000749242,0.00015407002,0.000050851977,0.00007700118,0.000067070214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003233363,0.0005378682,0.00046044786,0.00033840744,0.00014046002,0.00040598403,0.00011126314,0.00036150613,0.001218021],"category_scores_gemma":[0.0002583136,0.00022088924,0.00038114164,0.00019522055,0.00039174853,0.0002863469,0.00017734003,0.0005719701,0.0005276587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032129325,0.00001745303,0.000073847485,0.00002657815,0.0000027079943,0.000023696924,0.000011786303,0.000011476297,0.999191,0.000007839414,0.000005070444,0.00030731925],"study_design_scores_gemma":[0.000037018093,0.0006975672,0.0037384434,0.000011074988,0.00002091231,0.0001427664,0.000030385097,0.00020646857,0.99436706,0.000032920583,0.0007105606,0.000004808772],"about_ca_topic_score_codex":0.00023139369,"about_ca_topic_score_gemma":0.00027893714,"teacher_disagreement_score":0.001218021,"about_ca_system_score_codex":0.00027044798,"about_ca_system_score_gemma":0.00019881825,"threshold_uncertainty_score":0.0040746927},"labels":[],"label_agreement":null},{"id":"W2078619682","doi":"10.1016/j.dci.2008.10.001","title":"Identification of an Atlantic salmon IFN multigene cluster encoding three IFN subtypes with very different expression properties","year":2008,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":159,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Beijing Institute of Genomics, Chinese Academy of Sciences; Genome Atlantic; Norges Forskningsråd","keywords":"Biology; Gene; Interferon; MDA5; Promoter; Gene cluster; Molecular biology; Interferon-stimulated gene; Downregulation and upregulation; Gene expression; Genetics; RNA; RNA interference; Receptor; Innate immune system","score_opus":0.03446322840242523,"score_gpt":0.24470739664359706,"score_spread":0.2102441682411718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078619682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951355,0.0004498576,0.0022911895,0.00009988224,0.000027526226,0.000022157403,0.0010799742,0.00002551603,0.0008683827],"genre_scores_gemma":[0.9837,0.0003310587,0.00792027,0.00021103362,0.000025282685,0.00007499525,0.0047173416,0.000031807576,0.0029880395],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999002,0.000006568943,0.00000812666,0.00003409472,0.000021027492,0.00002996832],"domain_scores_gemma":[0.999645,0.00006371422,0.00008698609,0.000042379972,0.000064847816,0.000097048876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012882789,0.00027258517,0.00032175632,0.00032420212,0.00028150727,0.00032799583,0.00018837866,0.00035084123,0.00091232115],"category_scores_gemma":[0.00019957227,0.00019435413,0.0004769367,0.00019730181,0.0002965559,0.00020192121,0.00043761652,0.00065983407,0.0005194026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015132125,0.0000062761956,0.0015208725,0.00001586943,0.000003805638,0.000036368398,0.000028305236,0.000017917999,0.99737036,0.000055697394,0.000023679453,0.0007694176],"study_design_scores_gemma":[0.00007623504,0.0008382636,0.3017022,0.00004688238,0.00012257,0.0015285137,0.0005641474,0.0019538114,0.6854579,0.00045508455,0.007209908,0.000044552573],"about_ca_topic_score_codex":0.0023486319,"about_ca_topic_score_gemma":0.0028133846,"teacher_disagreement_score":0.0023486319,"about_ca_system_score_codex":0.00048889476,"about_ca_system_score_gemma":0.0005660167,"threshold_uncertainty_score":0.0046699643},"labels":[],"label_agreement":null},{"id":"W2078950997","doi":"10.1038/gene.2014.22","title":"An ENU-induced splicing mutation reveals a role for Unc93b1 in early immune cell activation following influenza A H1N1 infection","year":2014,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; Immune system; Immunology; Virology","score_opus":0.013525191294908291,"score_gpt":0.26142336716826303,"score_spread":0.24789817587335475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2078950997","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99163824,0.00027592378,0.0047186343,0.0002937681,0.00016208245,0.000038643728,0.0008109906,0.00011381879,0.0019479019],"genre_scores_gemma":[0.9957481,0.00010183964,0.0021350782,0.00016576826,0.000015130603,0.000025806326,0.00045350965,0.00008771452,0.0012671713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997489,0.000065842825,0.00003365926,0.00004720146,0.000060242928,0.000044305318],"domain_scores_gemma":[0.99968624,0.00008226706,0.00009369201,0.000042550764,0.000027888736,0.00006738948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002043048,0.00044726045,0.00036185334,0.00026018667,0.00043084737,0.0002798663,0.0005586905,0.00074731547,0.00303194],"category_scores_gemma":[0.00033802955,0.00015431673,0.0005152227,0.000206342,0.0004662781,0.00018031472,0.0003575101,0.00083368225,0.001105125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002804596,0.00005649321,0.00033415796,0.000019149746,0.0000144130845,0.00082814286,0.000023775445,0.00019294005,0.99633044,0.00028455333,0.00013389837,0.001501684],"study_design_scores_gemma":[0.000056513843,0.0002955364,0.014972744,0.000023774423,0.000036470337,0.0026932554,0.00015336189,0.0045097717,0.9739923,0.00038499472,0.0028522739,0.000028919387],"about_ca_topic_score_codex":0.0014527771,"about_ca_topic_score_gemma":0.002042173,"teacher_disagreement_score":0.00303194,"about_ca_system_score_codex":0.00036732227,"about_ca_system_score_gemma":0.00020624248,"threshold_uncertainty_score":0.010142863},"labels":[],"label_agreement":null},{"id":"W2079267013","doi":"10.1073/pnas.1100702108","title":"A subclass of acylated anti-inflammatory mediators usurp Toll-like receptor 2 to inhibit neutrophil recruitment through peroxisome proliferator-activated receptor γ","year":2011,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Ministério da Educação; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Canadian Institutes of Health Research; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Alberta Cancer Foundation","keywords":"TLR2; Lipoteichoic acid; Receptor; Toll-like receptor; Proinflammatory cytokine; Biology; Innate immune system; Pattern recognition receptor; Inflammation; Cell biology; Immune system; Lipopeptide; Immunology; Biochemistry; Staphylococcus aureus","score_opus":0.06645854363851982,"score_gpt":0.2888571792488389,"score_spread":0.22239863561031908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079267013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95098853,0.023071676,0.015037734,0.00045903606,0.0003446903,0.0002835544,0.00074329384,0.00028528846,0.008786235],"genre_scores_gemma":[0.97197706,0.006697874,0.008395482,0.0005567816,0.00015514203,0.00019107015,0.0010930601,0.000037746246,0.010895881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998826,0.00002796141,0.000011729982,0.000019647661,0.000029766441,0.000028262048],"domain_scores_gemma":[0.99993396,0.0000078015,0.000015134509,0.000010004179,0.000011087692,0.000022029279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017842282,0.000551759,0.0002296192,0.0002751419,0.00014713178,0.00029374255,0.00030215332,0.0003429191,0.0024850245],"category_scores_gemma":[0.00012650834,0.00011713897,0.00031564987,0.00019053154,0.00017453385,0.00024488944,0.0002852396,0.00062600354,0.0009935725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003860604,0.000090913396,0.00020853037,0.00006606003,0.000014080425,0.00008632778,0.000012170656,0.00010859979,0.98953605,0.00031130284,0.00016872896,0.009011215],"study_design_scores_gemma":[0.00013497745,0.0016937046,0.002490417,0.000012479213,0.000036081783,0.00054995617,0.000018745312,0.0005668749,0.97087675,0.00017384255,0.02343441,0.000011727084],"about_ca_topic_score_codex":0.00018308705,"about_ca_topic_score_gemma":0.00027918513,"teacher_disagreement_score":0.0024850245,"about_ca_system_score_codex":0.00019385756,"about_ca_system_score_gemma":0.00016785221,"threshold_uncertainty_score":0.008313298},"labels":[],"label_agreement":null},{"id":"W2079724632","doi":"10.1097/inf.0b013e318157ad01","title":"Staphylococcal Pericarditis, and Liver and Paratracheal Abscesses as Presentations in Two New Cases of Interleukin-1 Receptor Associated Kinase 4 Deficiency","year":2008,"lang":"en","type":"article","venue":"The Pediatric Infectious Disease Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University","funders":"","keywords":"Pericarditis; Medicine; Internal medicine; Cardiology; Gastroenterology","score_opus":0.01191915802010983,"score_gpt":0.26138130552965766,"score_spread":0.24946214750954782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079724632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99368966,0.0012329288,0.00038012682,0.00038916167,0.000073919626,0.000180263,0.0002256085,0.000033136042,0.003795092],"genre_scores_gemma":[0.99678457,0.00071918487,0.0007761399,0.00030847872,0.000120222416,0.0000492843,0.0003353212,0.000018195084,0.0008885276],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9992791,0.000038885897,0.000053107447,0.00014616163,0.00015088789,0.00033177537],"domain_scores_gemma":[0.9987962,0.00014320962,0.0002608194,0.00005591235,0.00014296958,0.0006007958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030742842,0.0028676265,0.00068303157,0.001996404,0.002154288,0.0012366816,0.0011208999,0.0023203162,0.0015281317],"category_scores_gemma":[0.002299294,0.0013693444,0.00066055666,0.001571502,0.0017619486,0.0007495507,0.0010994514,0.001818562,0.00034114002],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016025572,0.000115777664,0.08981408,0.00007869282,0.00002746297,0.902816,0.0009917137,0.00009372046,0.0028213332,0.00023781107,0.0006227074,0.002220535],"study_design_scores_gemma":[0.000069132366,0.0001346935,0.0898696,0.000025220916,0.000031399133,0.9076099,0.00044921003,0.00014833549,0.00049019593,0.00006401893,0.0010855309,0.000022683598],"about_ca_topic_score_codex":0.07718652,"about_ca_topic_score_gemma":0.10347003,"teacher_disagreement_score":0.07718652,"about_ca_system_score_codex":0.004533458,"about_ca_system_score_gemma":0.0032528455,"threshold_uncertainty_score":0.15347451},"labels":[],"label_agreement":null},{"id":"W2079780498","doi":"10.1016/j.immuni.2006.04.012","title":"Bacterial Superantigens Bypass Lck-Dependent T Cell Receptor Signaling by Activating a Gα11-Dependent, PLC-β-Mediated Pathway","year":2006,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Robarts Clinical Trials; Western University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases","keywords":"Biology; Superantigen; T-cell receptor; Cell biology; Signal transduction; MAPK/ERK pathway; ZAP70; Heterotrimeric G protein; T cell; Phosphorylation; G protein; Immunology; Immune system","score_opus":0.007559912364664269,"score_gpt":0.2010912754486004,"score_spread":0.19353136308393612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079780498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98564076,0.0022649753,0.0053497767,0.0005212415,0.00012595094,0.000070443435,0.00035030275,0.00030527735,0.005371317],"genre_scores_gemma":[0.9929309,0.0013030318,0.0019778854,0.00022197375,0.000042093478,0.000050149974,0.00037379938,0.00003608961,0.0030640648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972266,0.000045982037,0.000018223112,0.000026358313,0.000052163487,0.000134605],"domain_scores_gemma":[0.99980706,0.000039261206,0.00005688226,0.000032593474,0.000020094107,0.0000441573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021375381,0.0005243619,0.00022819969,0.0002719502,0.00019001286,0.00057238014,0.00019695991,0.00030490267,0.0025413963],"category_scores_gemma":[0.0002698661,0.00018822389,0.00031417186,0.00015116007,0.0003098439,0.00044122958,0.00040029478,0.0012680033,0.001307647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006701495,0.000086359374,0.0004088896,0.000075219614,0.000009714735,0.00014423851,0.000021507292,0.00009583747,0.99275136,0.0005230349,0.00023310583,0.0049804877],"study_design_scores_gemma":[0.00016247114,0.00047923828,0.0071401224,0.000019111445,0.000020135165,0.00052380544,0.0000649808,0.0010825761,0.98468786,0.0003843732,0.0054283584,0.000006952231],"about_ca_topic_score_codex":0.00036890444,"about_ca_topic_score_gemma":0.00048557293,"teacher_disagreement_score":0.0025413963,"about_ca_system_score_codex":0.00048394984,"about_ca_system_score_gemma":0.00039706868,"threshold_uncertainty_score":0.008501828},"labels":[],"label_agreement":null},{"id":"W2079915560","doi":"10.1007/s00134-011-2236-y","title":"Effects of esmolol on systemic and pulmonary hemodynamics and on oxygenation in pigs with hypodynamic endotoxin shock","year":2011,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Société de Réanimation de Langue Française; Heart and Stroke Foundation of Canada","keywords":"Medicine; Esmolol; Shock (circulatory); Anesthesiology; Hemodynamics; Oxygenation; Anesthesia; Pain medicine; Pulmonary hypertension; Cardiology; Internal medicine; Heart rate; Blood pressure","score_opus":0.006626398432509612,"score_gpt":0.2052510131829033,"score_spread":0.1986246147503937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079915560","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991273,0.00025895328,0.00015325684,0.00012998593,0.00005343425,0.000018463248,0.00007376656,0.000011996519,0.00017287422],"genre_scores_gemma":[0.997931,0.00035325505,0.00025181225,0.00013160218,0.00006802046,0.000038787322,0.00015043795,0.000008789201,0.0010663021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996933,0.00008508772,0.000016638083,0.000037755286,0.000027021963,0.00014011974],"domain_scores_gemma":[0.9994186,0.00020814338,0.00007755943,0.000068510744,0.000036514575,0.00019073571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052783225,0.00060631864,0.0008830429,0.00030521446,0.00032100076,0.0004130467,0.00039437404,0.0009109913,0.0013550512],"category_scores_gemma":[0.00059824466,0.000368969,0.00052390003,0.00021723434,0.0013408612,0.001002205,0.00021678803,0.0018625516,0.00024950903],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.20896775,0.010618354,0.004909896,0.00027021326,0.00017532578,0.0013058855,0.0006172332,0.0011279994,0.74889046,0.00040861027,0.0004382783,0.022269981],"study_design_scores_gemma":[0.0065905266,0.20173427,0.049656685,0.00007073796,0.00049282354,0.0005877062,0.0010602446,0.0044571627,0.73278177,0.000428608,0.0020288436,0.00011053682],"about_ca_topic_score_codex":0.0008285906,"about_ca_topic_score_gemma":0.00078734854,"teacher_disagreement_score":0.0013550512,"about_ca_system_score_codex":0.00035091967,"about_ca_system_score_gemma":0.0005611452,"threshold_uncertainty_score":0.004533112},"labels":[],"label_agreement":null},{"id":"W2079941677","doi":"10.1186/cc7702","title":"Bench-to-bedside review: Association of genetic variation with sepsis","year":2009,"lang":"en","type":"review","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Toronto","funders":"Michael Smith Health Research BC; Heart and Stroke Foundation of Canada","keywords":"Single-nucleotide polymorphism; Genetic association; Genome-wide association study; Genetics; Genetic variation; Candidate gene; Copy-number variation; Nonsynonymous substitution; Genotype; Epigenetics; Medicine; Disease; Biology; Genetic predisposition; Genome; Allele; Gene; Bioinformatics","score_opus":0.01740152430253262,"score_gpt":0.3181751916984321,"score_spread":0.3007736673958995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079941677","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007863091,0.99438065,0.00015413256,0.0013413706,0.0029373306,0.0000079241545,0.000023634964,0.00001175691,0.0010645308],"genre_scores_gemma":[0.0004191626,0.9953371,0.00020994138,0.0008073047,0.002417411,0.0000087136195,0.00004287689,0.0000029295536,0.0007544528],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999572,0.00010269165,0.00007442219,0.00006844824,0.0001583441,0.000024026767],"domain_scores_gemma":[0.9985203,0.00069162925,0.00015530059,0.000033916513,0.00046140334,0.0001374877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084080524,0.0014087778,0.002185492,0.002516816,0.00033959176,0.0011297566,0.0014348698,0.0017050845,0.0069951154],"category_scores_gemma":[0.0025791593,0.0003299422,0.0005536933,0.0030525385,0.00060105545,0.0019536242,0.0006907323,0.0018700174,0.005019809],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114719114,0.000058373826,0.00038285172,0.011879971,0.000098275144,0.00057353027,0.000038207978,0.00027658622,0.00069443247,0.00093089737,0.2117238,0.77322817],"study_design_scores_gemma":[0.00003816681,0.00011855396,0.0025645746,0.005745626,0.00013971135,0.0048869713,0.000070825765,0.000119510565,0.00022886026,0.0016498689,0.9844014,0.000035851222],"about_ca_topic_score_codex":0.000943213,"about_ca_topic_score_gemma":0.0016098729,"teacher_disagreement_score":0.0069951154,"about_ca_system_score_codex":0.00061636063,"about_ca_system_score_gemma":0.0012348332,"threshold_uncertainty_score":0.023400962},"labels":[],"label_agreement":null},{"id":"W2080402548","doi":"10.1016/s0140-6736(04)16253-3","title":"Role of toll-like receptor 4 in protection by bacterial lipopolysaccharide in the nasal mucosa of atopic children but not adults","year":2004,"lang":"en","type":"article","venue":"The Lancet","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":102,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Montreal Children's Hospital; McGill University Health Centre; Hôpital Notre-Dame","funders":"Canadian Institutes of Health Research; Health Canada; Canadian Lung Association","keywords":"Lipopolysaccharide; TLR4; Immunology; Cytokine; Allergic inflammation; Mucous membrane of nose; Toll-like receptor; Medicine; Inflammation; Interleukin; Receptor; Immune system; Innate immune system; Internal medicine","score_opus":0.007630489497749465,"score_gpt":0.20937804939274166,"score_spread":0.20174755989499218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080402548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97327733,0.023831187,0.00019428534,0.0009087367,0.00008796365,0.000012514483,0.0001865358,0.000015551655,0.0014858895],"genre_scores_gemma":[0.99277,0.0054596225,0.00029959247,0.00017671118,0.000078328936,0.0000100301,0.00010239331,0.000004944355,0.0010983193],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998441,0.000046105615,0.000014247795,0.000022829116,0.000025822315,0.00004676963],"domain_scores_gemma":[0.999724,0.00006116028,0.00008186897,0.000025706464,0.000032809563,0.00007444437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004721111,0.000278666,0.00037641104,0.00027347985,0.00017302153,0.0004002452,0.000309507,0.0005730011,0.0013462725],"category_scores_gemma":[0.0004966867,0.0002189555,0.00024971776,0.00012153482,0.0004198946,0.00048100692,0.00027144872,0.00059791893,0.00023827827],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017800989,0.00054564705,0.4685363,0.0013365416,0.00039654877,0.0048336815,0.0012641078,0.00026503557,0.4028445,0.0017420014,0.003780286,0.09665443],"study_design_scores_gemma":[0.0003277967,0.0026068506,0.9612801,0.00014027081,0.0002835289,0.0049307873,0.0011897497,0.0003298948,0.022592332,0.00076036504,0.0055336705,0.000024624596],"about_ca_topic_score_codex":0.0010169337,"about_ca_topic_score_gemma":0.0008392632,"teacher_disagreement_score":0.0013462725,"about_ca_system_score_codex":0.0002680281,"about_ca_system_score_gemma":0.0003145882,"threshold_uncertainty_score":0.0045036674},"labels":[],"label_agreement":null},{"id":"W2080630776","doi":"10.1371/journal.pone.0043381","title":"Characterization of Chicken Thrombocyte Responses to Toll-Like Receptor Ligands","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":125,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Poultry Industry Council","keywords":"Platelet; TLR4; Receptor; Platelet activation; Toll-like receptor; TLR9; Cell biology; Biology; Immunology; Innate immune system; Toll-Like Receptor 9; Lipopolysaccharide; Stimulation; CpG Oligodeoxynucleotide; Immune system; Protease-activated receptor; Pattern recognition receptor; Chemistry; Gene expression; Gene; Biochemistry; Endocrinology; Thrombin","score_opus":0.03196391991225422,"score_gpt":0.23195871921738304,"score_spread":0.1999947993051288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080630776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99511564,0.0014791867,0.0017110669,0.00005605158,0.000016388218,0.00003959262,0.00072416593,0.000012482847,0.0008454522],"genre_scores_gemma":[0.9903132,0.0013083961,0.0035455746,0.00016753827,0.000019806825,0.00010910462,0.0016275801,0.000015369624,0.0028933473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999,0.00001542816,0.000008964184,0.00003290647,0.000023218221,0.000019453073],"domain_scores_gemma":[0.9998437,0.000042178548,0.000039813985,0.000011138642,0.000034214838,0.000028867255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011431724,0.00018590057,0.00016941721,0.00025817595,0.00009469639,0.00022525691,0.00010402687,0.00028929432,0.00056431396],"category_scores_gemma":[0.00018365232,0.00012776101,0.00017421029,0.000110254936,0.00013502856,0.000111218265,0.00009082188,0.00039622828,0.00022605708],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096517,0.0000071476206,0.0007625161,0.000035533147,0.0000031076775,0.000057248704,0.00003594668,0.000028970235,0.99842584,0.000023589118,0.000013227855,0.0005103577],"study_design_scores_gemma":[0.00002899589,0.0015425443,0.17855056,0.00004025451,0.000063453765,0.0012381354,0.00047181104,0.0016492248,0.80937403,0.000093954215,0.0069278264,0.000019075656],"about_ca_topic_score_codex":0.0005707184,"about_ca_topic_score_gemma":0.0008006003,"teacher_disagreement_score":0.0005707184,"about_ca_system_score_codex":0.00015628488,"about_ca_system_score_gemma":0.00007623118,"threshold_uncertainty_score":0.0018877983},"labels":[],"label_agreement":null},{"id":"W2080815766","doi":"10.1016/j.jconrel.2004.02.022","title":"Strategies for enhancing the immunostimulatory effects of CpG oligodeoxynucleotides","year":2004,"lang":"en","type":"review","venue":"Journal of Controlled Release","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":208,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"CpG Oligodeoxynucleotide; Immune system; CpG site; In vivo; Immunology; TLR9; Biology; Acquired immune system; Cytokine; Innate immune system; Downregulation and upregulation; Cancer research; Gene expression; Biochemistry","score_opus":0.009935497584589966,"score_gpt":0.28150205745556006,"score_spread":0.2715665598709701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080815766","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004121439,0.98198915,0.009496185,0.0003469769,0.000711799,0.0000538298,0.000032860968,0.000067879184,0.0031798668],"genre_scores_gemma":[0.01564614,0.96782583,0.009687773,0.0004556761,0.00034240138,0.000099347926,0.00010154175,0.000014199379,0.005827119],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998815,0.000015466709,0.000011170934,0.000023076118,0.00004915291,0.00001960231],"domain_scores_gemma":[0.9998956,0.000040967312,0.000019642464,0.000005794513,0.000025348332,0.0000125436445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004907229,0.0011925611,0.0011134397,0.0006851935,0.00016783795,0.00057216495,0.00088787684,0.0009699428,0.0015004763],"category_scores_gemma":[0.00025734922,0.000273355,0.00030739795,0.0005542696,0.0005443941,0.00072258676,0.00044424253,0.0016649361,0.0011605275],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002189312,0.00018334444,0.000088790555,0.0062480895,0.000045722074,0.00038288682,0.000054714063,0.0010130539,0.24307546,0.005971788,0.0044465726,0.7382707],"study_design_scores_gemma":[0.00017785649,0.0010158588,0.00094793894,0.0011421052,0.00016008053,0.0027425599,0.000068607915,0.0011130351,0.2474983,0.0030932508,0.74196446,0.00007586908],"about_ca_topic_score_codex":0.0005478136,"about_ca_topic_score_gemma":0.00092354394,"teacher_disagreement_score":0.0015004763,"about_ca_system_score_codex":0.0005214926,"about_ca_system_score_gemma":0.00041692908,"threshold_uncertainty_score":0.005019605},"labels":[],"label_agreement":null},{"id":"W2080842773","doi":"10.1097/01.ccm.0000104919.07538.04","title":"N,N′,N′-triacetylglucosamine, an inhibitor of lysozyme, prevents myocardial depression in Escherichia coli sepsis in dogs*","year":2004,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Sepsis; Medicine; Septic shock; Pharmacology; Lysozyme; In vivo; Shock (circulatory); Internal medicine; Biochemistry; Chemistry; Biology","score_opus":0.012354015585152513,"score_gpt":0.2935149372802854,"score_spread":0.28116092169513285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080842773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986298,0.00044919242,0.00035035276,0.00011445917,0.0000386757,0.000095146606,0.00012807111,0.000036385332,0.00015784235],"genre_scores_gemma":[0.99511397,0.0008776712,0.0016373702,0.00016540915,0.00010218531,0.00030375825,0.0007191966,0.000026749836,0.0010537584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993994,0.00020607814,0.00007047979,0.000099090714,0.00007990125,0.00014489083],"domain_scores_gemma":[0.99892455,0.00013786483,0.00039374657,0.00009148384,0.00007202794,0.00038026497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008858387,0.000923262,0.001300527,0.00063296646,0.00042384476,0.00039551652,0.0006690306,0.0006978143,0.0010197437],"category_scores_gemma":[0.0008022904,0.0004998727,0.00048225175,0.0003231936,0.0010340865,0.000606273,0.00032033067,0.0014464154,0.00024902468],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.12156615,0.016525645,0.0037570226,0.0004416494,0.00017781665,0.00016180976,0.00017267567,0.00045165888,0.84147155,0.0001330706,0.00055104995,0.014589943],"study_design_scores_gemma":[0.0073242364,0.48002887,0.029838659,0.000065216635,0.00034872032,0.00037640918,0.00017815927,0.00204172,0.4775909,0.00009591831,0.0020628264,0.00004842941],"about_ca_topic_score_codex":0.00057479,"about_ca_topic_score_gemma":0.0011489853,"teacher_disagreement_score":0.001300527,"about_ca_system_score_codex":0.000522486,"about_ca_system_score_gemma":0.0005705128,"threshold_uncertainty_score":0.0046848655},"labels":[],"label_agreement":null},{"id":"W2081065852","doi":"10.1155/2013/636847","title":"CpG ODN and ISCOMATRIX Adjuvant: A Synergistic Adjuvant Combination Inducing Strong T-Cell IFN-<mml:math xmlns:mml=\"http://www.w3.org/1998/Math/MathML\" id=\"M1\"><mml:mrow><mml:mi>γ</mml:mi></mml:mrow></mml:math>Responses","year":2013,"lang":"en","type":"article","venue":"BioMed Research International","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada); Terry Fox Research Institute","funders":"","keywords":"Adjuvant; Antigen; CpG Oligodeoxynucleotide; Immune system; Ovalbumin; TLR9; Immunology; Chemistry; Biology; Biochemistry; Gene","score_opus":0.027872788460689777,"score_gpt":0.28433147099161993,"score_spread":0.2564586825309301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081065852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932534,0.0017096722,0.0024606392,0.000084377054,0.00009164233,0.0001306744,0.0001722765,0.000056086385,0.002041149],"genre_scores_gemma":[0.99191624,0.0012449883,0.004173388,0.000073740506,0.000033192147,0.000092045266,0.0002648166,0.000010217737,0.0021912872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999861,0.000034691984,0.0000153281,0.00001926366,0.000037642967,0.00003199059],"domain_scores_gemma":[0.9999325,0.000011842772,0.000014918134,0.000007232586,0.0000066346524,0.000026799175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021420898,0.00057087315,0.0002761542,0.00022733645,0.000059593673,0.00014587844,0.00011186463,0.00026217033,0.00093898707],"category_scores_gemma":[0.00009226536,0.000110710156,0.00019279505,0.00013398236,0.00014132819,0.00014481306,0.00019123172,0.0004890982,0.00023332152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027139246,0.000131927,0.000080881044,0.00008564602,0.0000091396005,0.000029185314,0.0000075099188,0.00014667693,0.99721164,0.000040221417,0.000036914105,0.001948881],"study_design_scores_gemma":[0.000060918625,0.0026267362,0.0006739515,0.000008903149,0.000025669391,0.00011560489,0.000006408975,0.0005755692,0.99452305,0.000016918557,0.0013628395,0.0000033621177],"about_ca_topic_score_codex":0.00021446301,"about_ca_topic_score_gemma":0.0004986834,"teacher_disagreement_score":0.00093898707,"about_ca_system_score_codex":0.000105786065,"about_ca_system_score_gemma":0.00033033502,"threshold_uncertainty_score":0.0031412244},"labels":[],"label_agreement":null},{"id":"W2081164937","doi":"10.1016/j.femsim.2004.12.005","title":"Biological importance of the two Toll-like receptors, TLR2 and TLR4, in macrophage response to infection with<i>Candida albicans</i>","year":2005,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Ministero dell’Istruzione, dell’Università e della Ricerca","keywords":"TLR2; Candida albicans; Toll-like receptor; TLR4; Corpus albicans; Microbiology; Biology; Macrophage; Innate immune system; Effector; Antibody opsonization; Receptor; Immunology; Inflammation; Immune system; Phagocytosis; Biochemistry; In vitro","score_opus":0.005426479870513113,"score_gpt":0.22947009985089828,"score_spread":0.22404361998038516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081164937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99634475,0.0014398214,0.0011168051,0.00008330425,0.000015495147,0.000016445025,0.00024721268,0.000023980047,0.0007122968],"genre_scores_gemma":[0.99540955,0.00077981694,0.0019587255,0.00006172838,0.00001680734,0.000046402038,0.00045462273,0.000009188887,0.0012631662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998004,0.000042306838,0.000023342542,0.000033545337,0.00003961471,0.00006084799],"domain_scores_gemma":[0.9998889,0.000016514337,0.000035110377,0.000013096462,0.000023788767,0.000022505554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021837966,0.0004148615,0.00021581048,0.0002515535,0.0001435165,0.00035634314,0.00022212348,0.00055637065,0.0011400752],"category_scores_gemma":[0.00015682931,0.00015199796,0.00026997935,0.00009598372,0.00023668307,0.00026905967,0.00029093507,0.00037172408,0.00034599673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027617204,0.000014650912,0.0005752087,0.00003248064,0.0000026618895,0.00005146479,0.000007650448,0.000020211915,0.998485,0.00002364322,0.000008728125,0.0005021832],"study_design_scores_gemma":[0.000022460015,0.0005810232,0.018203292,0.000012783206,0.000031614127,0.0007444243,0.000099560035,0.0003564984,0.97897595,0.00007301383,0.00089173106,0.00000766263],"about_ca_topic_score_codex":0.00018563027,"about_ca_topic_score_gemma":0.00015592332,"teacher_disagreement_score":0.0011400752,"about_ca_system_score_codex":0.00018067166,"about_ca_system_score_gemma":0.00015164023,"threshold_uncertainty_score":0.003813982},"labels":[],"label_agreement":null},{"id":"W2081447765","doi":"10.1111/j.1749-6632.2000.tb05390.x","title":"Natural Immunity and Neuroimmune Host Defense","year":2000,"lang":"en","type":"review","venue":"Annals of the New York Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Immune system; Immunology; Biology; Innate immune system; Immunity; Antigen; Acquired immune system; Antibody","score_opus":0.09540568291327814,"score_gpt":0.3505227408244427,"score_spread":0.25511705791116457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081447765","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028088946,0.8576376,0.0075044837,0.011308168,0.0024329175,0.000109148146,0.00023632096,0.0001190346,0.09256337],"genre_scores_gemma":[0.4246476,0.48335853,0.0080938935,0.013308251,0.0048563313,0.00040252318,0.00055254647,0.00003712419,0.064743206],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996234,0.000121593985,0.000019304724,0.00007339258,0.00008815924,0.00007409063],"domain_scores_gemma":[0.9997427,0.00005048747,0.00005698154,0.000016099366,0.00006675166,0.00006702205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004902556,0.00036579676,0.00042064016,0.0004810546,0.00045101068,0.0015399026,0.0005037918,0.0008040296,0.005681418],"category_scores_gemma":[0.00043226974,0.0000731973,0.00017577574,0.00038579153,0.0014050785,0.0007303669,0.00097603275,0.0013175575,0.0012448509],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046741983,0.0003901212,0.008749712,0.002905085,0.00014933717,0.0033883878,0.001426062,0.00067492074,0.02445781,0.28367785,0.055396587,0.6183167],"study_design_scores_gemma":[0.00004751278,0.0005905698,0.019405052,0.0013919768,0.000059817357,0.0074485806,0.0007726551,0.00051991415,0.003889681,0.068025984,0.8977972,0.000051100906],"about_ca_topic_score_codex":0.00092256075,"about_ca_topic_score_gemma":0.0007368209,"teacher_disagreement_score":0.005681418,"about_ca_system_score_codex":0.00078543613,"about_ca_system_score_gemma":0.0008522235,"threshold_uncertainty_score":0.019006252},"labels":[],"label_agreement":null},{"id":"W2082169293","doi":"10.1016/j.imlet.2014.04.002","title":"Corrigendum to “Coronin 1 is dispensable for leukocyte recruitment and liver injury in concanavalin A-induced hepatitis” [Immunol. Lett. 153 (1–2) (2013) 62–70]","year":2014,"lang":"en","type":"erratum","venue":"Immunology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Concanavalin A; Liver injury; Virology; Hepatitis; Immunology; Biology; Medicine; Pharmacology; Genetics","score_opus":0.03263513565454487,"score_gpt":0.2685555427313632,"score_spread":0.2359204070768183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082169293","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017476491,0.002799136,0.00037277388,0.03583162,0.9538067,0.000043933735,0.00061613397,0.00029878644,0.0060561234],"genre_scores_gemma":[0.010959949,0.020236876,0.0031126703,0.102374636,0.40679923,0.00026631012,0.0039027818,0.00073111634,0.45161644],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970667,0.00031413176,0.00046460342,0.00045884613,0.0012792695,0.0004164396],"domain_scores_gemma":[0.99227315,0.0017229492,0.00046959415,0.0005787676,0.004257907,0.0006975532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002320219,0.0029950878,0.0029526285,0.0041312245,0.0041891583,0.0031056495,0.004471542,0.0075096963,0.0792876],"category_scores_gemma":[0.01606124,0.0016208428,0.00292385,0.0024445923,0.0025957231,0.002291918,0.0025851033,0.0066392543,0.04705634],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060429884,0.000018749051,0.000052201885,0.00019722217,0.000020981208,0.00044256714,0.000015478941,0.000060403898,0.00035778587,0.0004979593,0.99254894,0.005727226],"study_design_scores_gemma":[0.000045837678,0.00004621314,0.0017594215,0.00016673557,0.000066070425,0.00044497725,0.000041606167,0.00024370816,0.0014018331,0.0009304154,0.9947942,0.000058957747],"about_ca_topic_score_codex":0.017376412,"about_ca_topic_score_gemma":0.023526562,"teacher_disagreement_score":0.0792876,"about_ca_system_score_codex":0.0044746543,"about_ca_system_score_gemma":0.003538061,"threshold_uncertainty_score":0.26524347},"labels":[],"label_agreement":null},{"id":"W2082247320","doi":"10.1089/nat.2011.0298","title":"Immunostimulatory Potential of Silencing RNAs Can Be Mediated by a Non-Uridine-Rich Toll-Like Receptor 7 Motif","year":2011,"lang":"en","type":"article","venue":"Nucleic Acid Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"Bundesministerium für Bildung und Forschung","keywords":"TLR7; Small interfering RNA; Biology; Gene silencing; RNA interference; RNA; Sequence motif; Innate immune system; Cell biology; Phosphodiester bond; RNA silencing; Trans-acting siRNA; Structural motif; Toll-like receptor; Molecular biology; Biochemistry; Receptor; Gene","score_opus":0.016308510216030872,"score_gpt":0.21829989081790965,"score_spread":0.20199138060187877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082247320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9862737,0.0035923042,0.006827614,0.00005402694,0.000031036336,0.000031180552,0.0001192017,0.000072882656,0.0029981325],"genre_scores_gemma":[0.9940941,0.00088693167,0.0036713823,0.00005065669,0.000012048219,0.00003081128,0.00017598525,0.000017747947,0.001060291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985254,0.00004281324,0.000012197538,0.000031674837,0.00003819789,0.000022644155],"domain_scores_gemma":[0.99986243,0.000053617157,0.000037483394,0.000012204896,0.00001932135,0.000014961398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019159328,0.0003475497,0.00020172916,0.00015176146,0.00008970483,0.00022490947,0.00014129652,0.0002842582,0.0009116599],"category_scores_gemma":[0.00022148713,0.00008339665,0.00020925127,0.00007658712,0.00019625075,0.0001279927,0.00014562576,0.0002024477,0.00029102527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025641208,0.000003349234,0.000026895366,0.000019362995,0.0000018915595,0.000010740336,0.0000027941123,0.00002115526,0.9992434,0.00003282095,0.0000043223063,0.00060764345],"study_design_scores_gemma":[0.0000029910989,0.00013219674,0.0005275823,0.0000024672884,0.00000912905,0.00005727267,0.000003220029,0.00024662606,0.9984133,0.000016974098,0.0005865401,0.0000016418577],"about_ca_topic_score_codex":0.000096304604,"about_ca_topic_score_gemma":0.00018664422,"teacher_disagreement_score":0.0009116599,"about_ca_system_score_codex":0.00011380517,"about_ca_system_score_gemma":0.00009503408,"threshold_uncertainty_score":0.0030497909},"labels":[],"label_agreement":null},{"id":"W2082263327","doi":"10.1016/j.immuni.2004.07.010","title":"LPS-Induced Upregulation of SHIP Is Essential for Endotoxin Tolerance","year":2004,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":304,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Lipopolysaccharide; Biology; Autocrine signalling; Downregulation and upregulation; In vivo; Stimulation; Immunology; Bone marrow; Cell biology; Endocrinology; Cell culture","score_opus":0.018718058055246966,"score_gpt":0.26849834903376246,"score_spread":0.2497802909785155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082263327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891265,0.0019798174,0.0048872093,0.0006579128,0.00018443307,0.00003381247,0.00061673444,0.00020864911,0.0023049123],"genre_scores_gemma":[0.98953515,0.0008833122,0.0032092212,0.00012562188,0.00006642612,0.000056542463,0.0016483129,0.00007526952,0.0044002426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977726,0.000047792746,0.000024141686,0.000033528697,0.000048289243,0.00006899609],"domain_scores_gemma":[0.9995732,0.000048074697,0.00011584473,0.00008428221,0.000049508173,0.00012919039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028423054,0.0005296531,0.00033850808,0.000269576,0.00033409125,0.00061072793,0.00027771702,0.00029792494,0.0029841538],"category_scores_gemma":[0.00030129665,0.00031231673,0.0005449295,0.00015307558,0.0005438402,0.00061240606,0.00077725196,0.0016581244,0.0013716932],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061056705,0.00004193661,0.00047506884,0.00005155744,0.0000085012725,0.00018267808,0.000015751988,0.00008119273,0.9969664,0.00028344046,0.00014448048,0.0011383307],"study_design_scores_gemma":[0.00007826303,0.0003697288,0.039602064,0.00001794409,0.000037904556,0.0009678662,0.00013660295,0.0018949141,0.9509923,0.0004281859,0.0054603647,0.000013958996],"about_ca_topic_score_codex":0.00018775965,"about_ca_topic_score_gemma":0.00034694074,"teacher_disagreement_score":0.0029841538,"about_ca_system_score_codex":0.0004293429,"about_ca_system_score_gemma":0.0003314944,"threshold_uncertainty_score":0.009983003},"labels":[],"label_agreement":null},{"id":"W2082423758","doi":"10.1006/cimm.2001.1899","title":"Plasmid DNA Induces Increased Lymphocyte Trafficking: A Specific Role for CpG Motifs","year":2001,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"","keywords":"Biology; CpG site; Immunosurveillance; DNA; Cell biology; Plasmid; CpG Oligodeoxynucleotide; Effector; Molecular biology; Cell; Gene; Gene expression; DNA methylation; Genetics","score_opus":0.0125492678868465,"score_gpt":0.20882980915195617,"score_spread":0.1962805412651097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082423758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99134266,0.0014170975,0.0049122893,0.00017041073,0.00007930641,0.00004435579,0.00034496607,0.00022013744,0.0014687907],"genre_scores_gemma":[0.99292165,0.00068454107,0.0025125826,0.00010384977,0.000022737508,0.00006770477,0.0006428688,0.00005559553,0.00298851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997968,0.000039523322,0.000011082745,0.00004089047,0.0000341286,0.00007764445],"domain_scores_gemma":[0.9996605,0.00012977427,0.000059688515,0.000047143036,0.00002825701,0.00007467151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017863237,0.0005301936,0.0003422693,0.00041999048,0.00014674089,0.0004704469,0.00021664875,0.0006391001,0.0036555333],"category_scores_gemma":[0.00034335334,0.00016770247,0.00037746498,0.0002264916,0.00029777188,0.00032979096,0.00031552443,0.0012089262,0.00073374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041258824,0.00006833155,0.00008076772,0.000035467794,0.0000041743774,0.000034567045,0.0000080622085,0.000029203855,0.99777466,0.00009141636,0.000030095816,0.001430585],"study_design_scores_gemma":[0.000043528984,0.000524506,0.0020481758,0.000009537086,0.000018112818,0.00012924126,0.000024390245,0.0003800257,0.995905,0.00007566566,0.000837723,0.0000039737456],"about_ca_topic_score_codex":0.00031899795,"about_ca_topic_score_gemma":0.00037862093,"teacher_disagreement_score":0.0036555333,"about_ca_system_score_codex":0.00040546205,"about_ca_system_score_gemma":0.00030935835,"threshold_uncertainty_score":0.012228966},"labels":[],"label_agreement":null},{"id":"W2082511494","doi":"10.1016/j.jaci.2011.12.179","title":"The Sialylated Fraction Of IVIg Suppresses Th2-driven Airway Inflammation Via The Induction Of Tolerogenic Dendritic Cells","year":2012,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc; McGill University; Christie (Canada)","funders":"","keywords":"Fraction (chemistry); Immunology; Airway; Dendritic cell; Inflammation; Chemistry; Medicine; Immune system; Anesthesia","score_opus":0.01574816459843926,"score_gpt":0.2783023274107494,"score_spread":0.26255416281231014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082511494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99698704,0.0009465104,0.00070813525,0.000106117564,0.000056701054,0.000016910517,0.00008460785,0.00004268159,0.0010513724],"genre_scores_gemma":[0.9977208,0.00037458705,0.0004741557,0.000064433654,0.000034054814,0.0000110649025,0.0001257552,0.000016015389,0.0011791695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998653,0.000028898785,0.00000878976,0.000014104601,0.000025175936,0.00005768009],"domain_scores_gemma":[0.99990857,0.000011996377,0.000018800376,0.000017582432,0.000008502098,0.000034592245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014562355,0.0003826124,0.00030553967,0.00016780004,0.00014166428,0.00036676836,0.00018050171,0.00028747995,0.0009032987],"category_scores_gemma":[0.00014432178,0.00011868199,0.00022688821,0.00008646468,0.00020309383,0.000159797,0.00016869682,0.0009659841,0.00035370624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00053526496,0.000089969835,0.0002815232,0.000021483997,0.000007808768,0.000031043204,0.000008404713,0.00010061673,0.99567324,0.000063058564,0.000059253576,0.0031282443],"study_design_scores_gemma":[0.00016780835,0.0015850478,0.005516655,0.0000100877805,0.00003995075,0.00018541276,0.00004759619,0.001314163,0.98828655,0.00013230271,0.0027089764,0.0000055502032],"about_ca_topic_score_codex":0.00042022174,"about_ca_topic_score_gemma":0.0005462556,"teacher_disagreement_score":0.0009032987,"about_ca_system_score_codex":0.0002298869,"about_ca_system_score_gemma":0.00031703146,"threshold_uncertainty_score":0.003021896},"labels":[],"label_agreement":null},{"id":"W2082758573","doi":"10.6000/1927-520x.2013.02.02.2","title":"Comparative Analysis of Molecular Structure, Function and Expression of Buffalo (Bubalus bubalis) Toll-Like Receptor 9","year":2013,"lang":"en","type":"article","venue":"Journal of Buffalo Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Biology; Toll-Like Receptor 9; Bubalus; TLR9; Peptide sequence; Genetics; Molecular biology; Gene; Gene expression","score_opus":0.008781417692355128,"score_gpt":0.24764081091371062,"score_spread":0.2388593932213555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082758573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977501,0.0010009513,0.00030879254,0.000031649677,0.0000087742765,0.0000045489796,0.00050059904,0.000008786904,0.00038576013],"genre_scores_gemma":[0.9958395,0.0005515704,0.00091420615,0.000041933577,0.000013793506,0.000016956224,0.0017474158,0.000008522654,0.00086608017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992216,0.000012663164,0.000006054832,0.000022360351,0.000019024243,0.000017638566],"domain_scores_gemma":[0.9998988,0.000017410299,0.00003682317,0.0000035755907,0.00001423172,0.00002913725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096578384,0.000177095,0.00021014964,0.00030752106,0.00010477382,0.00020358416,0.00008450766,0.00013151448,0.0012035335],"category_scores_gemma":[0.00019369589,0.00006451347,0.00018272117,0.00015307644,0.000105874875,0.00013713111,0.00011686996,0.00014209299,0.0002600788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024409355,0.000016007334,0.0037230898,0.000058388792,0.000010583512,0.00012612062,0.00006510548,0.000025170972,0.99466974,0.00003163265,0.000035932724,0.0009940863],"study_design_scores_gemma":[0.00004316985,0.0013910835,0.7977298,0.000029295326,0.000120672375,0.0021263033,0.00049286545,0.0017628792,0.18983386,0.00013006772,0.0063121626,0.000027892813],"about_ca_topic_score_codex":0.0006973921,"about_ca_topic_score_gemma":0.0006496654,"teacher_disagreement_score":0.0012035335,"about_ca_system_score_codex":0.00010628719,"about_ca_system_score_gemma":0.000060005405,"threshold_uncertainty_score":0.004026234},"labels":[],"label_agreement":null},{"id":"W2082821890","doi":"10.1016/j.vetimm.2006.04.003","title":"Assessment of the ovine acute phase response and hepatic gene expression in response to Escherichia coli endotoxin","year":2006,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Escherichia coli; Acute-phase protein; Gene; Gene expression; Molecular biology; Microbiology; Genetics; Immunology; Inflammation","score_opus":0.009308967625045298,"score_gpt":0.2745077533069336,"score_spread":0.2651987856818883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082821890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99805874,0.00034952554,0.0004812767,0.00003819673,0.00001175771,0.000024898241,0.0003363873,0.0000080354375,0.0006911411],"genre_scores_gemma":[0.99342453,0.00057112426,0.0008578162,0.00009576665,0.000024986537,0.00009763266,0.0007804798,0.000016315898,0.00413132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998266,0.00002748744,0.00000897415,0.00005129613,0.000030768093,0.00005493198],"domain_scores_gemma":[0.9994665,0.00014874857,0.00012514352,0.000047787547,0.00006867607,0.00014325352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020164435,0.00031909588,0.0003145363,0.00054420053,0.00031197388,0.00049403263,0.00012800623,0.0005145503,0.0013731302],"category_scores_gemma":[0.0004834291,0.00022564169,0.00025184194,0.0003243208,0.0007427959,0.00032373355,0.00019109374,0.000815968,0.00028717835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005036655,0.00014060758,0.008382653,0.00007072715,0.00001917759,0.0003031004,0.00023607867,0.000118673284,0.9833392,0.00011051255,0.00005208388,0.0021906302],"study_design_scores_gemma":[0.00013751948,0.0062200264,0.4772731,0.000037640366,0.00008883685,0.000860972,0.001387863,0.0010788713,0.50970864,0.00024519453,0.0029259664,0.000035423036],"about_ca_topic_score_codex":0.0012426612,"about_ca_topic_score_gemma":0.002371013,"teacher_disagreement_score":0.0013731302,"about_ca_system_score_codex":0.00035625434,"about_ca_system_score_gemma":0.00023635227,"threshold_uncertainty_score":0.0045936108},"labels":[],"label_agreement":null},{"id":"W2082879633","doi":"10.1186/1756-0500-5-93","title":"The influence of different anticoagulants and sample preparation methods on measurement of mCD14 on bovine monocytes and polymorphonuclear neutrophil leukocytes","year":2012,"lang":"en","type":"article","venue":"BMC Research Notes","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ste. Anne's Hospital; McGill University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Novalait; Université de Montréal; Public Health Agency of Canada; Dairy Farmers of Canada","keywords":"Whole blood; Molecular biology; Ethylenediaminetetraacetic acid; Heparin; Monocyte; Sodium citrate; CD14; Monoclonal antibody; Granulocyte; Medicine; Immunology; Flow cytometry; Antibody; Chemistry; Biology; Pathology; Internal medicine","score_opus":0.14445907832643873,"score_gpt":0.40743370863689476,"score_spread":0.26297463031045604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082879633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96830195,0.012854764,0.015733175,0.00029231788,0.00021051212,0.00041444233,0.00041724634,0.00009812633,0.0016774074],"genre_scores_gemma":[0.9083088,0.006256357,0.08097057,0.0005498601,0.0001381715,0.0009209522,0.0012398164,0.00008270401,0.0015327708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974475,0.0009046256,0.00044198777,0.00032294277,0.00069673336,0.00018624961],"domain_scores_gemma":[0.9985713,0.000573412,0.00038054417,0.000115604846,0.0002814128,0.00007766533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016656781,0.00057137694,0.000321386,0.0004888817,0.00036700463,0.0005186329,0.00028383898,0.000407795,0.00086674007],"category_scores_gemma":[0.0020234731,0.00022730805,0.00024207469,0.0005047827,0.00042749307,0.00021953454,0.00029247193,0.00038976638,0.00026147984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006626567,0.00009884271,0.0027950802,0.00017538285,0.000025503248,0.00009125255,0.00015583112,0.000047084643,0.98964405,0.000040372073,0.000083658706,0.0061803595],"study_design_scores_gemma":[0.00003243964,0.000976036,0.022908568,0.000057070814,0.000114662864,0.00046108087,0.00011715052,0.0007265046,0.97088987,0.000059166417,0.0036321527,0.000025349063],"about_ca_topic_score_codex":0.00063631433,"about_ca_topic_score_gemma":0.0011766618,"teacher_disagreement_score":0.0016656781,"about_ca_system_score_codex":0.00022863154,"about_ca_system_score_gemma":0.00032036027,"threshold_uncertainty_score":0.00880909},"labels":[],"label_agreement":null},{"id":"W2082906715","doi":"10.1016/s1556-0864(15)30360-9","title":"Does Granulocyte Colony–Stimulating Factor Affect Survival in Patients with Advanced Non-small Cell Lung Cancer?","year":2006,"lang":"en","type":"article","venue":"Journal of Thoracic Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Amgen Canada","keywords":"Medicine; Internal medicine; Neutropenia; Carboplatin; Lung cancer; Chemotherapy; Febrile neutropenia; Performance status; Regimen; Granulocyte colony-stimulating factor; Hazard ratio; Gastroenterology; Surgery; Chemotherapy regimen; Oncology; Cisplatin; Confidence interval","score_opus":0.00630827182617636,"score_gpt":0.3047303130474068,"score_spread":0.2984220412212304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2082906715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97833186,0.015386364,0.00010270717,0.0037165736,0.00024826935,0.000023535915,0.00048282504,0.000010044441,0.0016977055],"genre_scores_gemma":[0.9960102,0.002210784,0.00008110666,0.00080536975,0.000283478,0.000012897706,0.0003314437,0.000001926047,0.00026259467],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99969316,0.00011586017,0.000038223796,0.00003801455,0.000046495003,0.000068268644],"domain_scores_gemma":[0.99872464,0.00057207706,0.00028006872,0.00004530831,0.00012217562,0.00025573466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006585619,0.00031877117,0.0012090247,0.00028511614,0.00032186863,0.0006235672,0.00036574237,0.0011896397,0.0012773728],"category_scores_gemma":[0.0026049947,0.00016494209,0.0009843493,0.0007122196,0.00040851173,0.00066473236,0.00020384035,0.0010159692,0.00029739342],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012020874,0.0004045177,0.9382743,0.0001972136,0.00089740223,0.00032887197,0.00009630047,0.00031291766,0.0011024459,0.00009573431,0.0014911606,0.044778172],"study_design_scores_gemma":[0.00070749916,0.0034369885,0.9905545,0.00006360087,0.0011666346,0.0004988564,0.00026713766,0.0006282047,0.0003706788,0.00031779462,0.0019683891,0.00001983394],"about_ca_topic_score_codex":0.0017856404,"about_ca_topic_score_gemma":0.0047327154,"teacher_disagreement_score":0.0017856404,"about_ca_system_score_codex":0.00046056046,"about_ca_system_score_gemma":0.000562686,"threshold_uncertainty_score":0.0042732954},"labels":[],"label_agreement":null},{"id":"W2083273816","doi":"10.1016/j.molimm.2005.04.010","title":"Mouse splenic B lymphocyte activation using different activation stimuli induces in vitro splicing of tumor necrosis factor-α nuclear pre-mRNA","year":2005,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute; National Institutes of Health","keywords":"Tumor necrosis factor alpha; Biology; Cell biology; Ionomycin; Molecular biology; RNA splicing; Cancer research; Immunology; RNA; Biochemistry","score_opus":0.013792084009085125,"score_gpt":0.2443308661974322,"score_spread":0.23053878218834706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083273816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98613507,0.0015447444,0.009075945,0.00014145182,0.00013202212,0.00008496005,0.00040025893,0.00012578946,0.0023598047],"genre_scores_gemma":[0.9871126,0.0010735517,0.006095004,0.00012751264,0.00006886051,0.00009849721,0.0019520108,0.0000698629,0.0034019866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958736,0.000118481556,0.000036957048,0.00006731011,0.000080328886,0.00010960397],"domain_scores_gemma":[0.9996049,0.00014190997,0.000077524266,0.000077210905,0.0000345609,0.000063856685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004488826,0.00063444703,0.00032603423,0.0003633891,0.00022422003,0.00048266313,0.00022213534,0.00031838662,0.0014692135],"category_scores_gemma":[0.0002592015,0.00028567557,0.0006158395,0.00021969622,0.00031082498,0.00018332603,0.00024702458,0.0011901242,0.00085269095],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002224953,0.00002066783,0.00006511666,0.000013053101,0.0000034277357,0.000033025965,0.0000103381,0.00001820055,0.9992392,0.000057268247,0.000014449015,0.00030265734],"study_design_scores_gemma":[0.000022326996,0.00019047229,0.0009205348,0.0000038959793,0.000013569765,0.00014720789,0.0000174262,0.00023021358,0.99780804,0.000041798492,0.0006018361,0.000002666918],"about_ca_topic_score_codex":0.00029116622,"about_ca_topic_score_gemma":0.00051026494,"teacher_disagreement_score":0.0014692135,"about_ca_system_score_codex":0.00029768614,"about_ca_system_score_gemma":0.00021536916,"threshold_uncertainty_score":0.0049150586},"labels":[],"label_agreement":null},{"id":"W2083412868","doi":"10.1016/j.chom.2008.12.011","title":"Shigella Induces Mitochondrial Dysfunction and Cell Death in Nonmyleoid Cells","year":2009,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":154,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Cell biology; Shigella; Programmed cell death; Mitochondrion; Inflammasome; Shigella flexneri; Signal transduction; Intracellular; Apoptosis; Oxidative stress; Microbiology; Immunology; Inflammation; Biochemistry; Bacteria; Escherichia coli; Genetics; Salmonella","score_opus":0.006503378628795673,"score_gpt":0.20447071626131866,"score_spread":0.19796733763252297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083412868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968144,0.00085691345,0.00096039346,0.00006481261,0.00002957416,0.000019653648,0.00036382614,0.00003540799,0.00085494545],"genre_scores_gemma":[0.9977951,0.00029314213,0.0003156789,0.000030105935,0.000008441015,0.000030636726,0.00045177233,0.0000068820405,0.0010682041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997193,0.00006549257,0.00003273253,0.000037383434,0.000059125297,0.00008588137],"domain_scores_gemma":[0.9996989,0.00009709317,0.000041851672,0.000075572985,0.000041103216,0.000045507175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027954948,0.00028188323,0.0003946243,0.00025410164,0.00024824595,0.0003551585,0.00021019092,0.00042800378,0.0025867834],"category_scores_gemma":[0.0002003878,0.00015933311,0.00035174596,0.00028057562,0.00021583168,0.00037526002,0.00033058546,0.0008218721,0.00068373594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074500777,0.00006140941,0.0007422741,0.00005118242,0.00001167756,0.00014871989,0.000055106026,0.000033650667,0.9970367,0.00008073447,0.00006390131,0.00096980925],"study_design_scores_gemma":[0.000112714806,0.0021198147,0.04278743,0.000013471856,0.000026584654,0.001109314,0.00034892387,0.00063152344,0.95078295,0.00013851866,0.0019195024,0.000009199606],"about_ca_topic_score_codex":0.00047846098,"about_ca_topic_score_gemma":0.0006146052,"teacher_disagreement_score":0.0025867834,"about_ca_system_score_codex":0.00024275674,"about_ca_system_score_gemma":0.00016708828,"threshold_uncertainty_score":0.008653641},"labels":[],"label_agreement":null},{"id":"W2083543804","doi":"10.1016/j.it.2007.04.005","title":"Complexities of targeting innate immunity to treat infection","year":2007,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Immunity; Immunology; Biology; Inflammation; Immune system; Acquired immune system; Pattern recognition receptor; Effector; Toll-like receptor","score_opus":0.07511651795132482,"score_gpt":0.36619348252020906,"score_spread":0.2910769645688842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083543804","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009431601,0.9941146,0.00051308254,0.0015833775,0.0018603214,0.0000073190154,0.000015989584,0.00002171098,0.0017892636],"genre_scores_gemma":[0.00067876605,0.9949026,0.0006649552,0.0010641805,0.0012727903,0.000014242453,0.000025886146,0.000004276319,0.0013722421],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999718,0.000046434034,0.00003325695,0.00004076216,0.00013146257,0.000030084377],"domain_scores_gemma":[0.99939394,0.00026856756,0.000054744713,0.000021756056,0.0001805376,0.000080450416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012595232,0.0013379093,0.0021873293,0.0012390671,0.0004009691,0.0014575904,0.0015117222,0.0017948373,0.0040342016],"category_scores_gemma":[0.0012922924,0.0003167357,0.00048471623,0.001200831,0.0012011222,0.002518847,0.00075139414,0.0045116,0.0031263682],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016048574,0.00009067272,0.00013334423,0.005232388,0.00008814086,0.00028314226,0.00005178175,0.00052483805,0.0020662954,0.009050902,0.1175399,0.86477804],"study_design_scores_gemma":[0.000028212156,0.00005362219,0.00022306833,0.0008737464,0.000046700618,0.0007368739,0.000030191,0.00009665636,0.00024945446,0.0024349352,0.9952146,0.000012080667],"about_ca_topic_score_codex":0.0007869431,"about_ca_topic_score_gemma":0.0022521375,"teacher_disagreement_score":0.0040342016,"about_ca_system_score_codex":0.0007947902,"about_ca_system_score_gemma":0.001165465,"threshold_uncertainty_score":0.013495743},"labels":[],"label_agreement":null},{"id":"W2083613729","doi":"10.1073/pnas.1400478111","title":"Unleashing the potential of NOD- and Toll-like agonists as vaccine adjuvants","year":2014,"lang":"en","type":"review","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":303,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Adjuvant; Innate immune system; Pattern recognition receptor; Acquired immune system; Vaccine adjuvant; Immune system; Biology; Receptor; Immunology; Immunity; Inflammasome; Toll-like receptor; Nod; Computational biology; Inflammation; Gene; Genetics","score_opus":0.02969744894606244,"score_gpt":0.32058439532240596,"score_spread":0.2908869463763435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083613729","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023502724,0.99815077,0.00019540975,0.00018421657,0.00025271095,0.0000032913047,0.000008468281,0.0000058535297,0.00096417556],"genre_scores_gemma":[0.0011314332,0.9971951,0.00027373622,0.00013667851,0.00027679765,0.00000677036,0.000019926483,0.0000015023113,0.00095802586],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984324,0.000027156257,0.000015966607,0.000028017646,0.000065899294,0.000019632314],"domain_scores_gemma":[0.99982697,0.00006392012,0.00002582128,0.000007363277,0.000045580073,0.000030440286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005433055,0.00068301987,0.00093309325,0.0017625458,0.00021142262,0.0008561225,0.0006881731,0.0010311636,0.0027059114],"category_scores_gemma":[0.00044767524,0.0002720991,0.00029273552,0.0011924873,0.00043310583,0.0012984544,0.0007050467,0.0017326922,0.0025015194],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097338576,0.00008360836,0.00013040901,0.010031951,0.000050519397,0.0002948858,0.000063346844,0.00039323632,0.009914081,0.0074154288,0.017690625,0.9538346],"study_design_scores_gemma":[0.000015914427,0.00008877474,0.00046289037,0.0011191287,0.000033230735,0.00084146473,0.000037503687,0.00007678594,0.0016473964,0.0016485209,0.99401677,0.000011706296],"about_ca_topic_score_codex":0.00039605968,"about_ca_topic_score_gemma":0.0006732425,"teacher_disagreement_score":0.0027059114,"about_ca_system_score_codex":0.0004207647,"about_ca_system_score_gemma":0.0005875245,"threshold_uncertainty_score":0.009052157},"labels":[],"label_agreement":null},{"id":"W2083776964","doi":"10.1097/01.shk.0000136095.96306.08","title":"IMPAIRED INDUCTION OF IL-10 EXPRESSION IN THE LUNG FOLLOWING HEMORRHAGIC SHOCK","year":2004,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Proinflammatory cytokine; Resuscitation; Inflammation; Cytokine; Immunology; Lung; Messenger RNA; Medicine; Lipopolysaccharide; Shock (circulatory); Endocrinology; Internal medicine; Biology; Anesthesia; Gene","score_opus":0.010579707560862482,"score_gpt":0.24322663996568808,"score_spread":0.2326469324048256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083776964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957045,0.0013724702,0.0021779907,0.00006563947,0.000035469428,0.000027302103,0.00014946378,0.000051837473,0.0004153376],"genre_scores_gemma":[0.9971765,0.000791824,0.0010004296,0.000068872425,0.000023062488,0.000037384056,0.0002595017,0.0000072446733,0.00063511234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998388,0.000030312256,0.000019722342,0.000027422737,0.000041567375,0.000042128733],"domain_scores_gemma":[0.9997725,0.000039054015,0.00007225014,0.000024334118,0.000026232632,0.000065697044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019824223,0.0003219257,0.00034495594,0.00025857924,0.00010663895,0.00028200774,0.00010871638,0.00025591857,0.0010010002],"category_scores_gemma":[0.0002419247,0.00017904333,0.00020046481,0.00012151756,0.00038072222,0.00025117863,0.00020209013,0.0007025452,0.00023867458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003078566,0.000019404395,0.00035732295,0.000037105867,0.0000032177763,0.00009424523,0.000022749193,0.000024784471,0.9985268,0.000017951545,0.000009006679,0.00057948317],"study_design_scores_gemma":[0.000026750999,0.0019697128,0.03989094,0.0000136370245,0.000029588833,0.00080806407,0.00013879844,0.0008008697,0.9555367,0.00009859503,0.0006770556,0.0000091864695],"about_ca_topic_score_codex":0.00016414131,"about_ca_topic_score_gemma":0.00015753192,"teacher_disagreement_score":0.0010010002,"about_ca_system_score_codex":0.00017408426,"about_ca_system_score_gemma":0.00016833561,"threshold_uncertainty_score":0.0033487082},"labels":[],"label_agreement":null},{"id":"W2084389215","doi":"10.1038/gene.2013.5","title":"Association of common single-nucleotide polymorphisms in innate immune genes with differences in TLR-induced cytokine production in neonates","year":2013,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; University of British Columbia; University of Washington","keywords":"Biology; Single-nucleotide polymorphism; Innate immune system; Immunology; TLR3; Chemokine; Genotype; Genetics; SNP; Immune system; Cytokine; Gene; Toll-like receptor","score_opus":0.014073220568004379,"score_gpt":0.20728338907920169,"score_spread":0.1932101685111973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084389215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996216,0.000101314814,0.000105527615,0.000011983422,0.00000572274,0.0000020823945,0.000073162046,0.000001786423,0.0000767456],"genre_scores_gemma":[0.9994349,0.000088951514,0.00018544374,0.00001937206,0.00000770344,0.0000108581335,0.00010807785,0.0000052993564,0.00013928584],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99900156,0.00031102882,0.00013590745,0.0002923579,0.0001529088,0.00010629833],"domain_scores_gemma":[0.9981002,0.00078746973,0.0005817656,0.00014678104,0.00010827715,0.0002755795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007392756,0.0005780025,0.0007352876,0.0005490855,0.0002496604,0.000490397,0.0004533946,0.0006474674,0.0012488753],"category_scores_gemma":[0.002172733,0.00030549627,0.00054080144,0.0005648284,0.00052680034,0.00019501756,0.00041333993,0.0007979418,0.00016009455],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0072095087,0.00033095933,0.82478493,0.00011552266,0.00047317197,0.004503604,0.00072249677,0.00042081717,0.15580612,0.00025915547,0.00011621528,0.005257542],"study_design_scores_gemma":[0.00005190861,0.0013571301,0.983712,0.0000314298,0.0001602143,0.0043225368,0.0005305819,0.0004885645,0.008926871,0.00018424046,0.00021406985,0.000020396525],"about_ca_topic_score_codex":0.0007105092,"about_ca_topic_score_gemma":0.00038865753,"teacher_disagreement_score":0.0012488753,"about_ca_system_score_codex":0.00024936182,"about_ca_system_score_gemma":0.00024671224,"threshold_uncertainty_score":0.0041778684},"labels":[],"label_agreement":null},{"id":"W2084428844","doi":"10.1111/j.1365-2826.2010.01967.x","title":"Neonatal Programming by Neuroimmune Challenge: Effects on Responses and Tolerance to Septic Doses of Lipopolysaccharide in Adult Male and Female Rats","year":2010,"lang":"en","type":"article","venue":"Journal of Neuroendocrinology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Canadian Institutes of Health Research","keywords":"Lipopolysaccharide; Immune system; Hypothermia; Sepsis; Internal medicine; Endocrinology; Hyperthermia; Medicine; Immunology","score_opus":0.007529439444189234,"score_gpt":0.24914405657440328,"score_spread":0.24161461713021404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084428844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99788374,0.0005144741,0.0005868485,0.000092839895,0.000035065037,0.000018708559,0.00030076742,0.000040528314,0.0005269614],"genre_scores_gemma":[0.98998016,0.0012642797,0.001695551,0.00020601809,0.000042114974,0.00017828087,0.00057986676,0.00007100023,0.005982692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958557,0.0000637446,0.00002666541,0.00011092643,0.00009294618,0.00012015506],"domain_scores_gemma":[0.9990994,0.000057397956,0.00033741634,0.00008797029,0.00007764803,0.00034018175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026433865,0.0009261871,0.0005782262,0.0008500877,0.00028372643,0.00034822975,0.00035507913,0.00041839166,0.0024116405],"category_scores_gemma":[0.00034114215,0.00036454888,0.0003245828,0.00019275997,0.000828659,0.00047482533,0.00042254513,0.0012767768,0.00052570784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037831008,0.0007048323,0.0022316442,0.00006335927,0.000016117807,0.00037435288,0.00019942193,0.00008435002,0.9849732,0.0001877182,0.00011121107,0.0072707334],"study_design_scores_gemma":[0.00018911011,0.017478509,0.07245684,0.000051652616,0.00011065043,0.0008782975,0.00073607505,0.00063731783,0.90458524,0.0002999678,0.0024960714,0.000080280246],"about_ca_topic_score_codex":0.0009500368,"about_ca_topic_score_gemma":0.0019734183,"teacher_disagreement_score":0.0024116405,"about_ca_system_score_codex":0.00044740076,"about_ca_system_score_gemma":0.00050493,"threshold_uncertainty_score":0.008067727},"labels":[],"label_agreement":null},{"id":"W2084474700","doi":"10.1097/01.ccm.0000156242.44356.c5","title":"Polymorphisms in CD14, mannose-binding lectin, and Toll-like receptor-2 are associated with increased prevalence of infection in critically ill adults*","year":2005,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":178,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Michael Smith Health Research BC; St. Paul's Hospital; Canadian Institutes of Health Research","funders":"","keywords":"Mannan-binding lectin; Medicine; Immunology; Intensive care; Sepsis; Septic shock; CD14; Intensive care unit; Internal medicine; Lectin; Immune system; Intensive care medicine","score_opus":0.008376763300874357,"score_gpt":0.2536173663414922,"score_spread":0.24524060304061782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084474700","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996755,0.000065616165,0.000055127235,0.000023116887,0.0000028550076,0.000003933712,0.000077161676,0.0000014450837,0.00009523597],"genre_scores_gemma":[0.999584,0.000033968834,0.00013912392,0.000021857615,0.000010542209,0.000007280721,0.00012472975,0.0000012046994,0.00007739337],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99958974,0.000109845845,0.00005393574,0.0001044576,0.00007463233,0.00006738233],"domain_scores_gemma":[0.9987877,0.00031590494,0.0004892554,0.00006328918,0.000114600036,0.00022918577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003798025,0.00040813143,0.0002813004,0.0005103294,0.00035277713,0.00034937396,0.0003016827,0.00065472594,0.0019260672],"category_scores_gemma":[0.002152408,0.00024704484,0.00020840106,0.00051974977,0.0002951954,0.00020252512,0.00025104027,0.00048137986,0.00018997029],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017052828,0.000034881432,0.9977696,0.000005923696,0.000032887758,0.000102273116,0.000027055208,0.000022998494,0.0013429003,0.000007879749,0.00003817907,0.00044497728],"study_design_scores_gemma":[0.00001733416,0.00015558429,0.9985868,0.0000059769263,0.000028933484,0.0006233421,0.00006838951,0.00019955139,0.00022097048,0.000015141199,0.00007527921,0.0000027444335],"about_ca_topic_score_codex":0.002562879,"about_ca_topic_score_gemma":0.002533144,"teacher_disagreement_score":0.002562879,"about_ca_system_score_codex":0.00014029311,"about_ca_system_score_gemma":0.00023004126,"threshold_uncertainty_score":0.0064433217},"labels":[],"label_agreement":null},{"id":"W2084523295","doi":"10.1016/j.autrev.2011.10.007","title":"The biological significance of TLR3 variant, L412F, in conferring susceptibility to cutaneous candidiasis, CMV and autoimmunity","year":2011,"lang":"en","type":"review","venue":"Autoimmunity Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"","keywords":"TLR3; Autoimmunity; TLR2; Immunology; Biology; Toll-like receptor; TLR7; Innate immune system; Receptor; Immune system; Genetics","score_opus":0.09567956113437677,"score_gpt":0.3261355630337341,"score_spread":0.23045600189935733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084523295","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029315898,0.998516,0.00016006838,0.00022267461,0.00023297519,0.0000025176503,0.00002119426,0.0000057924594,0.0005456723],"genre_scores_gemma":[0.0013745417,0.99731195,0.00023607348,0.00019366719,0.00028471064,0.0000047790586,0.000046764817,0.000001161103,0.0005463533],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998801,0.000018248124,0.000019149602,0.000025114896,0.00004166339,0.000015682468],"domain_scores_gemma":[0.99982435,0.00007784358,0.0000307142,0.0000052467835,0.000040439987,0.000021460133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043749282,0.00070489786,0.0010854319,0.00072242116,0.00015131063,0.00065685186,0.0006317463,0.0008499293,0.0014716772],"category_scores_gemma":[0.0004512958,0.00016719983,0.00025631514,0.0008490535,0.0003861838,0.00065431895,0.0003948915,0.0012674604,0.0009824188],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029285136,0.00006118007,0.00040598016,0.008662021,0.000096605654,0.0005123947,0.00003070787,0.0003519272,0.011002861,0.002191814,0.027265891,0.9491259],"study_design_scores_gemma":[0.0000852861,0.00020009643,0.003431297,0.0023432919,0.00025585305,0.0040174937,0.00007677011,0.00016081236,0.0027562936,0.002810642,0.9838255,0.00003657968],"about_ca_topic_score_codex":0.00088460464,"about_ca_topic_score_gemma":0.001371597,"teacher_disagreement_score":0.0014716772,"about_ca_system_score_codex":0.00036463578,"about_ca_system_score_gemma":0.00072143215,"threshold_uncertainty_score":0.0049232244},"labels":[],"label_agreement":null},{"id":"W2084740946","doi":"10.1016/j.immuni.2006.02.014","title":"IFN-γ Suppresses IL-10 Production and Synergizes with TLR2 by Regulating GSK3 and CREB/AP-1 Proteins","year":2006,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":407,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"National Center for Research Resources; National Institutes of Health","keywords":"CREB; TLR2; Biology; Innate immune system; Signal transduction; MAPK/ERK pathway; Zymosan; Cell biology; STAT3; TRIF; TLR4; Transcription factor; Toll-like receptor; Immunology; Immune system; Gene; In vitro; Biochemistry","score_opus":0.004886622886850868,"score_gpt":0.19616195041436235,"score_spread":0.19127532752751147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2084740946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818163,0.0054197386,0.0033205068,0.00086971815,0.00047932653,0.00009348277,0.0015522479,0.00047737334,0.005971383],"genre_scores_gemma":[0.9909328,0.0018232012,0.0017529826,0.00027630661,0.00009693652,0.00011811645,0.0011951727,0.00007392709,0.003730499],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995591,0.000085605476,0.00004661721,0.000055972563,0.00007990914,0.000172776],"domain_scores_gemma":[0.9997143,0.00004737986,0.000073439805,0.00005890685,0.000020025846,0.000085969536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041434713,0.0011327405,0.0005942151,0.0006406967,0.0002813645,0.0006087167,0.00038656703,0.00043460296,0.0045195995],"category_scores_gemma":[0.00024737458,0.00038937887,0.00082689285,0.00025415275,0.00069351983,0.00038411716,0.0004833526,0.001748453,0.001277062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025669588,0.00017441912,0.0004029602,0.00013802809,0.000030428477,0.0001273804,0.00001810032,0.00013446047,0.9932666,0.00013138453,0.0002321127,0.002777256],"study_design_scores_gemma":[0.00023429326,0.0005507152,0.006382258,0.000021706193,0.00003876022,0.0003019272,0.000075521275,0.0004575013,0.9891081,0.00017784766,0.0026408718,0.000010546399],"about_ca_topic_score_codex":0.0005252017,"about_ca_topic_score_gemma":0.0010015005,"teacher_disagreement_score":0.0045195995,"about_ca_system_score_codex":0.00039385108,"about_ca_system_score_gemma":0.0005680326,"threshold_uncertainty_score":0.015119612},"labels":[],"label_agreement":null},{"id":"W2085159547","doi":"10.1073/pnas.1215165110","title":"Toll-like receptor 4 stimulation with the detoxified ligand monophosphoryl lipid A improves Alzheimer’s disease-related pathology","year":2013,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":250,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; GlaxoSmithKline (Canada); Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Agonist; Microglia; Toll-like receptor; Receptor; Medicine; Stimulation; Immunology; Pathogenesis; Immune system; Alzheimer's disease; Disease; Pharmacology; Inflammation; Pathology; Internal medicine; Innate immune system","score_opus":0.0185093325557851,"score_gpt":0.24927986019603068,"score_spread":0.23077052764024558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085159547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99336547,0.003930429,0.00084375637,0.0002428092,0.00009055042,0.000030965377,0.00015824867,0.000120186996,0.0012174959],"genre_scores_gemma":[0.9916106,0.0035469118,0.0017950898,0.00015563547,0.00007174141,0.00004314091,0.0002696952,0.000012229273,0.0024950274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993,0.00001538334,0.0000086400605,0.00000904359,0.000016154387,0.000020752497],"domain_scores_gemma":[0.99992836,0.000008961276,0.000018929166,0.000007869553,0.0000114994855,0.00002443671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015543167,0.00048310848,0.0004013519,0.000350767,0.00012169961,0.00021420226,0.0002125462,0.00030239078,0.0011376159],"category_scores_gemma":[0.00012264593,0.00009648274,0.00027178018,0.000097955824,0.00017213967,0.00030331616,0.0001517516,0.0007682688,0.00023102334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017407621,0.0009995952,0.0002589694,0.00016521553,0.000029743149,0.0000691896,0.000020738338,0.000094652714,0.9753559,0.00009170233,0.00024184458,0.020931518],"study_design_scores_gemma":[0.00047152225,0.015588717,0.014816216,0.000041326195,0.00013589278,0.00041169615,0.000059383696,0.0007999356,0.9621817,0.00024824633,0.0052309735,0.000014298905],"about_ca_topic_score_codex":0.00020421443,"about_ca_topic_score_gemma":0.00032441638,"teacher_disagreement_score":0.0011376159,"about_ca_system_score_codex":0.00011333786,"about_ca_system_score_gemma":0.00017773785,"threshold_uncertainty_score":0.003805697},"labels":[],"label_agreement":null},{"id":"W2085428764","doi":"10.1016/s0264-410x(03)00003-3","title":"Induction of protective immunity in pigs after immunisation with CpG oligodeoxynucleotides formulated in a lipid-based delivery system (Biphasix?)","year":2003,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"CpG Oligodeoxynucleotide; Adjuvant; CpG site; Immunology; Immune system; Lipid A; Immunity; Biology; Medicine; Pharmacology; Lipopolysaccharide; DNA methylation; Biochemistry","score_opus":0.007084664130578877,"score_gpt":0.20080326448327906,"score_spread":0.1937186003527002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085428764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994187,0.0007226716,0.0020985284,0.00022487015,0.00023463256,0.00012568993,0.0003568512,0.00010835211,0.0019412437],"genre_scores_gemma":[0.9921096,0.0006263075,0.0011081146,0.0002897327,0.00007836011,0.00013665165,0.0006626794,0.000035133555,0.004953343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999548,0.00007529385,0.000021838137,0.00011782326,0.000040909585,0.00019617508],"domain_scores_gemma":[0.99955577,0.00015370175,0.00008352181,0.000054622407,0.00004259705,0.0001098572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093113095,0.00090682483,0.00067443756,0.00051245885,0.0002885503,0.00047845734,0.00040439318,0.0015611419,0.0015893029],"category_scores_gemma":[0.0004095936,0.00053019106,0.00074402365,0.0001485042,0.00085126987,0.00085330504,0.0002756878,0.002187139,0.00074406405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003873173,0.000888302,0.00034277138,0.00014056031,0.000017040506,0.00017922028,0.000090760004,0.00012304269,0.99178106,0.00014418799,0.00011826593,0.0023016522],"study_design_scores_gemma":[0.0006953106,0.040864803,0.007660831,0.00005698909,0.00011549259,0.00036071756,0.00011212794,0.0008228258,0.94719744,0.00023862481,0.0018447086,0.000030145691],"about_ca_topic_score_codex":0.000741242,"about_ca_topic_score_gemma":0.00056218775,"teacher_disagreement_score":0.0015893029,"about_ca_system_score_codex":0.0004513044,"about_ca_system_score_gemma":0.00045579704,"threshold_uncertainty_score":0.0053167343},"labels":[],"label_agreement":null},{"id":"W2085430830","doi":"10.1517/13543784.11.12.1795","title":"Novel therapies for sepsis: antiendotoxin therapies","year":2002,"lang":"en","type":"review","venue":"Expert Opinion on Investigational Drugs","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Health Sciences Centre; Manitoba Health","funders":"","keywords":"Sepsis; Lipopolysaccharide; Immune system; Lipid A; Monoclonal antibody; Immunology; Receptor; Septic shock; Biology; Antibody; Medicine; Internal medicine","score_opus":0.08159723834029357,"score_gpt":0.3380841695788234,"score_spread":0.25648693123852984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085430830","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047440958,0.9926023,0.00062163186,0.0011490489,0.0009397154,0.000027445345,0.000019126092,0.000023134693,0.004143276],"genre_scores_gemma":[0.0020236527,0.98917353,0.0012177372,0.0013270989,0.0009173029,0.00004308691,0.000058582773,0.000004028745,0.0052350108],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997905,0.000044398228,0.000018763407,0.000027108093,0.0000986014,0.000020724543],"domain_scores_gemma":[0.9998466,0.000049409962,0.00002123293,0.0000070688097,0.000050768424,0.000024882069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058055384,0.0010059831,0.0011094513,0.001319629,0.00028495202,0.000717094,0.0008666096,0.0015128311,0.0069070524],"category_scores_gemma":[0.00036984112,0.0001849843,0.00041664383,0.0008956071,0.00039602778,0.0011012165,0.0004437342,0.001810634,0.0047289436],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016577219,0.00026052084,0.00009400214,0.004917351,0.000048306225,0.0005507221,0.000046379148,0.00023487417,0.0072856727,0.0026959807,0.03258072,0.95111954],"study_design_scores_gemma":[0.00013027043,0.00037108432,0.00066529465,0.0013508087,0.000055418488,0.0025388931,0.0000394872,0.00012287486,0.0014189826,0.0017887185,0.9915029,0.000015265628],"about_ca_topic_score_codex":0.00041117336,"about_ca_topic_score_gemma":0.0012256223,"teacher_disagreement_score":0.0069070524,"about_ca_system_score_codex":0.0005149254,"about_ca_system_score_gemma":0.0005890275,"threshold_uncertainty_score":0.023106396},"labels":[],"label_agreement":null},{"id":"W2085710013","doi":"10.1016/j.cellimm.2005.08.009","title":"Summary of the animal homologue section of HLDA8","year":2005,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Monoclonal antibody; Flow cytometry; Epitope; Antigen; Molecular biology; Antibody; Immunology","score_opus":0.006360754273959131,"score_gpt":0.19525890370843793,"score_spread":0.1888981494344788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085710013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28472897,0.21529114,0.13190378,0.021963518,0.046446785,0.0016713301,0.047465947,0.004981575,0.24554697],"genre_scores_gemma":[0.3170387,0.12790509,0.03855081,0.005727485,0.015541897,0.00082523894,0.13762876,0.00044771034,0.35633433],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998832,0.000013365252,0.000016138816,0.000025725323,0.000031264346,0.000030341394],"domain_scores_gemma":[0.9997706,0.000045774654,0.00004583975,0.000026177751,0.00004889314,0.00006274412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031292983,0.0007666182,0.0004998218,0.001022023,0.00043126976,0.0004618695,0.00085766526,0.00061854185,0.022626659],"category_scores_gemma":[0.00036480583,0.0002535535,0.0006917702,0.0007602148,0.00026342334,0.0006939113,0.00038364364,0.001231444,0.014360869],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015920377,0.0001667939,0.0010109721,0.0020112337,0.00006744343,0.00235994,0.00007588496,0.0005250717,0.8242329,0.008818158,0.03790232,0.1212373],"study_design_scores_gemma":[0.000035232588,0.0009557161,0.0046531553,0.00006225558,0.0001037358,0.0020870147,0.000060510753,0.00020212655,0.18153784,0.0012644589,0.8090165,0.000021517826],"about_ca_topic_score_codex":0.0006683284,"about_ca_topic_score_gemma":0.0005691696,"teacher_disagreement_score":0.022626659,"about_ca_system_score_codex":0.00038373418,"about_ca_system_score_gemma":0.00050247874,"threshold_uncertainty_score":0.07569373},"labels":[],"label_agreement":null},{"id":"W2085812610","doi":"10.1016/j.jim.2006.02.019","title":"Isolation of neutrophils from mouse liver: A novel method to study effector leukocytes during inflammation","year":2006,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Percoll; Chemokine; Molecular biology; Inflammation; Flow cytometry; Neutrophil elastase; Propidium iodide; Immunology; Centrifugation","score_opus":0.020306684689735472,"score_gpt":0.31914295883246707,"score_spread":0.2988362741427316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085812610","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6514836,0.025180334,0.30870965,0.002529423,0.0009455432,0.0013880524,0.0019252178,0.000721904,0.0071162484],"genre_scores_gemma":[0.76772887,0.012296999,0.20487764,0.0007995744,0.00035399382,0.0012853347,0.0024365862,0.00022448509,0.009996488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996661,0.000089451765,0.000038642203,0.000065793065,0.000066714405,0.00007335464],"domain_scores_gemma":[0.9997484,0.00006797577,0.000050712337,0.000051082985,0.00002903349,0.000052634514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007068083,0.0009564511,0.0005403818,0.0006332926,0.0003608908,0.0004895901,0.0006315618,0.0006547977,0.0013893805],"category_scores_gemma":[0.00028151157,0.00040008538,0.00042581698,0.00018553188,0.0004203085,0.0006830856,0.00054190855,0.001809651,0.0009190141],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016609301,0.000035072087,0.00019004324,0.000055638702,0.0000052239097,0.000064137916,0.000016191012,0.000026367168,0.9968706,0.00021138693,0.000052648036,0.0023066949],"study_design_scores_gemma":[0.00011695581,0.00047081592,0.004208101,0.00003108424,0.00006364631,0.0009787426,0.00004383221,0.0012174564,0.9858131,0.0003858513,0.0066547515,0.000015627902],"about_ca_topic_score_codex":0.0003141584,"about_ca_topic_score_gemma":0.00073634955,"teacher_disagreement_score":0.0013893805,"about_ca_system_score_codex":0.00028495854,"about_ca_system_score_gemma":0.00032601994,"threshold_uncertainty_score":0.00464797},"labels":[],"label_agreement":null},{"id":"W2085901268","doi":"10.1006/cimm.2000.1619","title":"Increased Burn-Induced Immunosuppression in Lipopolysaccharide-Resistant Mice","year":2000,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique; Université de Montréal","funders":"","keywords":"Immunosuppression; Splenocyte; Immune system; Lipopolysaccharide; Burn injury; Oxidative stress; Spleen; Immunology; Strain (injury); Total body surface area; Inflammation; Ratón; Sepsis; Medicine; Saline; Biology; Endocrinology; Internal medicine","score_opus":0.007833801851283012,"score_gpt":0.2116783083814646,"score_spread":0.20384450653018157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085901268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99560827,0.0011173972,0.0011297883,0.00015446625,0.000067485555,0.000034525427,0.00045387386,0.00015151761,0.0012826285],"genre_scores_gemma":[0.9934428,0.0008357878,0.0011682407,0.00011612117,0.000047011206,0.000061201885,0.00049340865,0.00006699569,0.0037685295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963224,0.000069111855,0.000033263357,0.00007021133,0.00007705016,0.000118047],"domain_scores_gemma":[0.9992587,0.0000726651,0.00020318881,0.00013585767,0.000051791434,0.00027772115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029856642,0.0010289708,0.00058258954,0.0010287674,0.00024041216,0.0004937384,0.0002982856,0.00064250233,0.0032527929],"category_scores_gemma":[0.0002827152,0.00034723573,0.00044793542,0.00026470333,0.00063025544,0.00061802915,0.00025624988,0.002107261,0.0007271445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011843215,0.00017613091,0.00025432825,0.000038022237,0.0000074900217,0.00011032759,0.000015976017,0.00006316914,0.99701214,0.0001390793,0.00003919419,0.0009597346],"study_design_scores_gemma":[0.00021921289,0.0027489464,0.013696404,0.000025039468,0.00006803584,0.0012685762,0.00007823107,0.0008673271,0.9794333,0.00021312208,0.0013626136,0.000019069583],"about_ca_topic_score_codex":0.00024168009,"about_ca_topic_score_gemma":0.00022471612,"teacher_disagreement_score":0.0032527929,"about_ca_system_score_codex":0.0002547838,"about_ca_system_score_gemma":0.00022581236,"threshold_uncertainty_score":0.010881722},"labels":[],"label_agreement":null},{"id":"W2085913728","doi":"10.1111/j.1365-2567.2007.02593.x","title":"Elevated expression of prostaglandin receptor and increased release of prostaglandin E<sub>2</sub> maintain the survival of CD45RO<sup>+</sup> T cells in the inflamed human pleural space","year":2007,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Prostaglandin; Prostaglandin E2; Receptor; Prostaglandin E; Expression (computer science); Internal medicine; Cancer research; Endocrinology; Cell biology; Biology; Chemistry; Medicine; Computer science","score_opus":0.008202928784087281,"score_gpt":0.2278277141075367,"score_spread":0.2196247853234494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085913728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963636,0.0022794006,0.00094583456,0.000021061163,0.000009489588,0.000011106765,0.000054484637,0.000017462215,0.0002975548],"genre_scores_gemma":[0.998033,0.0006548296,0.0005554124,0.00002451819,0.000015806629,0.000021499392,0.00009469915,0.0000038613953,0.00059645326],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998883,0.00002789355,0.000014018322,0.000018092265,0.000023124345,0.00002851894],"domain_scores_gemma":[0.99987125,0.000022502152,0.00004583973,0.000019864083,0.0000152348675,0.000025213161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014255237,0.00019185651,0.00022406614,0.00017305139,0.00008072078,0.0003459535,0.000073872514,0.00023470109,0.00095022965],"category_scores_gemma":[0.0002950373,0.000119854885,0.00015122596,0.000099770354,0.00017387873,0.00023484073,0.00014628322,0.00023281932,0.00036020644],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038583763,0.000019155656,0.0018127603,0.000039505496,0.0000054282436,0.0002742722,0.000025218134,0.000039904255,0.99566525,0.000034479825,0.000019062825,0.0016790556],"study_design_scores_gemma":[0.00009882133,0.0022001623,0.079804055,0.000018307237,0.00008201621,0.004158132,0.00023678372,0.0011760605,0.9094521,0.00013889403,0.00262318,0.000011375854],"about_ca_topic_score_codex":0.00010320265,"about_ca_topic_score_gemma":0.00009676718,"teacher_disagreement_score":0.00095022965,"about_ca_system_score_codex":0.00008541587,"about_ca_system_score_gemma":0.000091374546,"threshold_uncertainty_score":0.0031787753},"labels":[],"label_agreement":null},{"id":"W2085937538","doi":"10.1111/j.1742-4658.2006.05444.x","title":"Characterization, localization and possible anti‐inflammatory function of rat histone H4 mRNA variants","year":2006,"lang":"en","type":"article","venue":"FEBS Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Creations of Advanced Catalytic Transformation for the Sustainable Manufacturing at Low Energy, Low Environmental Load","keywords":"Molecular biology; Histone H4; Open reading frame; Messenger RNA; Biology; Untranslated region; Complementary DNA; Transcription (linguistics); Histone; Peptide sequence; Gene; Biochemistry","score_opus":0.005075292760324044,"score_gpt":0.2048764707599665,"score_spread":0.19980117799964248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085937538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99746644,0.00075109716,0.0012369943,0.0000266284,0.000007955858,0.000005283162,0.00014667888,0.00001583499,0.00034307822],"genre_scores_gemma":[0.99409443,0.0006162581,0.0022435044,0.00003491343,0.000017111719,0.00001624877,0.0010520141,0.000016452366,0.0019091342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999218,0.000010233485,0.0000052903315,0.000027065049,0.000014125846,0.00002152427],"domain_scores_gemma":[0.9998319,0.000036100202,0.00005040355,0.00001863511,0.000026540874,0.00003638015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111326066,0.00024300985,0.00010830342,0.0002168209,0.00009377496,0.00019121003,0.00014918532,0.00014982668,0.0007061316],"category_scores_gemma":[0.00016613698,0.00014603138,0.00020657723,0.00011295528,0.00016747044,0.000107740794,0.0001120256,0.00019377477,0.00026512385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013955642,0.000007225017,0.0011257116,0.000015763935,0.000004652355,0.0000316962,0.000010569838,0.000016083255,0.99751425,0.00003903327,0.000005804567,0.0010896483],"study_design_scores_gemma":[0.000029167717,0.0006376247,0.04935437,0.0000075160574,0.00005027134,0.0006148173,0.00007941685,0.00056872045,0.9468259,0.000115973104,0.0017085029,0.000007766439],"about_ca_topic_score_codex":0.00045588592,"about_ca_topic_score_gemma":0.00053434464,"teacher_disagreement_score":0.0007061316,"about_ca_system_score_codex":0.00017026401,"about_ca_system_score_gemma":0.0001362473,"threshold_uncertainty_score":0.0023622513},"labels":[],"label_agreement":null},{"id":"W2086055309","doi":"10.1111/j.1600-6143.2008.02236.x","title":"RIP2 Is Required for NOD Signaling But Not for Th1 Cell Differentiation and Cellular Allograft Rejection","year":2008,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Robarts Clinical Trials","funders":"University of Pennsylvania","keywords":"Nod; Immunosuppression; Immunology; Signal transduction; Cell biology; Immune system; Cytokine; Medicine; Transplantation; Biology; Cancer research; In vivo; Internal medicine; Genetics","score_opus":0.012709306174550341,"score_gpt":0.2245938013185138,"score_spread":0.21188449514396346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086055309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844838,0.0031206766,0.004238795,0.00043902392,0.00015850371,0.000044392138,0.0014512426,0.00036902135,0.005694486],"genre_scores_gemma":[0.98987204,0.00049212296,0.0025034708,0.00017979494,0.00004747967,0.0000535441,0.0027648031,0.00016636036,0.003920332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993437,0.00012960097,0.00007189124,0.00013348064,0.00013010424,0.00019126493],"domain_scores_gemma":[0.9992273,0.000103142585,0.00025094178,0.00014931866,0.00004772074,0.00022156331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004101205,0.00085994514,0.00061319716,0.0006349019,0.00044097833,0.0011585734,0.00065981364,0.00081085967,0.005775001],"category_scores_gemma":[0.0005864464,0.0005598934,0.0006282219,0.0002919451,0.0006201634,0.00086069154,0.0006813071,0.0015959282,0.002613013],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005380112,0.00004577041,0.00041378426,0.000054028427,0.000015484648,0.0002128811,0.000008436151,0.000053395313,0.9976654,0.00016794076,0.00014557046,0.00067926163],"study_design_scores_gemma":[0.00020165491,0.00039044395,0.030358348,0.000023983259,0.000082971674,0.004023838,0.00015465917,0.001830044,0.95665824,0.00049261044,0.0057537267,0.000029387482],"about_ca_topic_score_codex":0.0002445707,"about_ca_topic_score_gemma":0.00042292252,"teacher_disagreement_score":0.005775001,"about_ca_system_score_codex":0.0005525353,"about_ca_system_score_gemma":0.00037738564,"threshold_uncertainty_score":0.019319296},"labels":[],"label_agreement":null},{"id":"W2086421389","doi":"10.1016/j.vetimm.2008.10.298","title":"Strategies to link innate and adaptive immunity when designing vaccine adjuvants","year":2008,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Canada Research Chairs; Agriculture Funding Consortium; Bill and Melinda Gates Foundation","keywords":"Adjuvant; Biology; Acquired immune system; Pattern recognition receptor; Innate immune system; Immune system; Mannose receptor; Immunology; Antigen; Immunity; TLR7; Immunization; Pathogen-associated molecular pattern; Receptor; Antigen presentation; Vaccination; DNA vaccination; T cell; Toll-like receptor; Macrophage","score_opus":0.02851992808908588,"score_gpt":0.25117109634957385,"score_spread":0.22265116826048797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086421389","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5736979,0.03156436,0.3693995,0.003306082,0.0014308755,0.0024064358,0.0004495722,0.0007158029,0.017029405],"genre_scores_gemma":[0.79532623,0.01308076,0.18241403,0.0010798115,0.00021531571,0.0012952399,0.00024732275,0.000059246446,0.006281996],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997243,0.00009621104,0.000024476989,0.000037092905,0.00006636508,0.000051590425],"domain_scores_gemma":[0.9997049,0.00013349068,0.000050314255,0.000036291774,0.000051754705,0.00002333842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009819743,0.000759092,0.0008499374,0.00053860823,0.00039327066,0.0012562572,0.00048299934,0.0007993307,0.002255262],"category_scores_gemma":[0.0012393167,0.00047882873,0.0005297142,0.00024334512,0.00054427754,0.0017861148,0.0005975694,0.0018228958,0.0006924067],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048648007,0.00065152254,0.00077880424,0.0009290977,0.00007661559,0.0002025859,0.00012124398,0.008346044,0.8901706,0.017316386,0.00082812924,0.08009256],"study_design_scores_gemma":[0.00038134394,0.0036143747,0.0006172969,0.00021130122,0.00035349248,0.00044556992,0.00018416106,0.024777565,0.9256732,0.010069372,0.033617277,0.00005507577],"about_ca_topic_score_codex":0.00024778626,"about_ca_topic_score_gemma":0.00083547906,"teacher_disagreement_score":0.002255262,"about_ca_system_score_codex":0.00042718244,"about_ca_system_score_gemma":0.000614257,"threshold_uncertainty_score":0.007544577},"labels":[],"label_agreement":null},{"id":"W2086460234","doi":"10.1007/s00441-010-1058-5","title":"Innate immunity of the liver microcirculation","year":2010,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Intravital microscopy; Microcirculation; Innate immune system; Inflammation; Biology; Immune system; Immunity; Transillumination; Pathology; Immunology; Medicine; Internal medicine","score_opus":0.07775317542425857,"score_gpt":0.37002815527476546,"score_spread":0.2922749798505069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086460234","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000058796166,0.99768555,0.0002625489,0.00032960423,0.0007399472,0.000003651484,0.000013786799,0.0000072665603,0.000898882],"genre_scores_gemma":[0.0004595026,0.9969717,0.00028685507,0.0002544259,0.00078484206,0.0000065477925,0.00002841054,0.0000016418182,0.0012059474],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981207,0.00002747011,0.00002462102,0.000044137814,0.00007122813,0.00002042192],"domain_scores_gemma":[0.99955696,0.00016112693,0.000055685836,0.000018744327,0.0001396672,0.00006779768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008535807,0.0015561173,0.002173434,0.0018457131,0.00033853378,0.0013809785,0.0012424481,0.0016702827,0.0033222258],"category_scores_gemma":[0.00067712134,0.00039292648,0.00037763882,0.0021644065,0.0011607053,0.0023756193,0.0009825568,0.0028495276,0.0036143404],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013624826,0.00006590107,0.00014974666,0.008695425,0.000052077918,0.00020848081,0.000032686392,0.00039186937,0.003912316,0.0042969533,0.05574342,0.9263147],"study_design_scores_gemma":[0.000023213359,0.00005939549,0.000585224,0.0017610651,0.00005372838,0.0010165252,0.000046267134,0.000111545865,0.0006741623,0.0030688047,0.99258,0.000020084566],"about_ca_topic_score_codex":0.0011338303,"about_ca_topic_score_gemma":0.002383307,"teacher_disagreement_score":0.0033222258,"about_ca_system_score_codex":0.001000086,"about_ca_system_score_gemma":0.0014254934,"threshold_uncertainty_score":0.011113942},"labels":[],"label_agreement":null},{"id":"W2086610416","doi":"10.1002/jnr.20482","title":"Microglia and multiple sclerosis","year":2005,"lang":"en","type":"review","venue":"Journal of Neuroscience Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":189,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research; Multiple Sclerosis Society of Canada","keywords":"Microglia; Innate immune system; Immune system; Neuroscience; Neuroinflammation; Multiple sclerosis; Biology; Pattern recognition receptor; Immunology; Neuroimmunology; Central nervous system; Inflammation","score_opus":0.3115814032779392,"score_gpt":0.43047393672597895,"score_spread":0.11889253344803974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086610416","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008652636,0.99754554,0.0000917522,0.00036379538,0.0003731248,0.0000026909845,0.0000040645523,0.000006523368,0.0015259874],"genre_scores_gemma":[0.0014478212,0.9944617,0.00022988066,0.00037816554,0.000632224,0.000008699939,0.00001802884,0.00000189088,0.0028216096],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997713,0.000044882563,0.000024986055,0.000038909464,0.000096312324,0.000023635148],"domain_scores_gemma":[0.99980134,0.000058347923,0.000031031406,0.0000071290597,0.00005959732,0.000042584645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051613204,0.00111638,0.0011564409,0.0021598376,0.0005337712,0.0011811474,0.0009712064,0.0021429209,0.0038209462],"category_scores_gemma":[0.00051605876,0.00021527061,0.00024098404,0.002039836,0.0007668538,0.0012683312,0.00088624517,0.0014652,0.0045545287],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000657337,0.000054682307,0.00022177974,0.0045989105,0.000029858003,0.00072262506,0.0001411729,0.00021914743,0.002170487,0.006051663,0.053830933,0.931893],"study_design_scores_gemma":[0.00001328623,0.000048450183,0.0005939358,0.0010455986,0.000017228835,0.002861815,0.00005639132,0.000030270003,0.0002728234,0.0029759726,0.9920763,0.000007920672],"about_ca_topic_score_codex":0.0013458104,"about_ca_topic_score_gemma":0.002492628,"teacher_disagreement_score":0.0038209462,"about_ca_system_score_codex":0.0008960851,"about_ca_system_score_gemma":0.0011155641,"threshold_uncertainty_score":0.012782395},"labels":[],"label_agreement":null},{"id":"W2086853614","doi":"10.1016/s1081-1206(10)60472-3","title":"Association of polymorphisms of toll-like receptor 4 with a reduced prevalence of hay fever and atopy","year":2008,"lang":"en","type":"article","venue":"Annals of Allergy Asthma & Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Alberta","funders":"National Institutes of Health","keywords":"Hay fever; Atopy; Medicine; Immunology; Asthma; TLR4; Odds ratio; Genotype; Toll-like receptor; Allergy; Immune system; Innate immune system; Biology; Internal medicine; Genetics; Gene","score_opus":0.01448812723648537,"score_gpt":0.23008278049630493,"score_spread":0.21559465325981955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086853614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988171,0.00023007418,0.00030135436,0.00009108931,0.00003650457,0.000004330589,0.00016703713,0.0000119010765,0.00034049925],"genre_scores_gemma":[0.9989706,0.00006296955,0.00029953985,0.000043718017,0.00003572301,0.00000682505,0.00013238828,0.000008354988,0.00043993324],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991738,0.00034431292,0.00008170711,0.00021292115,0.00007815381,0.000109113804],"domain_scores_gemma":[0.99661994,0.0013973407,0.00097159506,0.00028452798,0.00021913981,0.0005073368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073372177,0.00082474964,0.0008473914,0.00096642546,0.00066548283,0.0006589825,0.00066593045,0.0012335718,0.005043181],"category_scores_gemma":[0.0027441855,0.00050453766,0.0010618905,0.00095716206,0.0005746769,0.00040043198,0.00036768333,0.0015190187,0.00032216302],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062551843,0.0005714177,0.9553276,0.00008374433,0.0015808706,0.0014437358,0.000286938,0.00022876148,0.030477587,0.00017581419,0.00026530772,0.0033029781],"study_design_scores_gemma":[0.000108713204,0.00064026535,0.99571335,0.000009078059,0.00036487676,0.0015109456,0.00012038999,0.000599681,0.0005982906,0.000119819,0.00019897566,0.000015780832],"about_ca_topic_score_codex":0.003675417,"about_ca_topic_score_gemma":0.0020047333,"teacher_disagreement_score":0.005043181,"about_ca_system_score_codex":0.00021500066,"about_ca_system_score_gemma":0.00033570852,"threshold_uncertainty_score":0.016871095},"labels":[],"label_agreement":null},{"id":"W2087098495","doi":"10.1097/md.0b013e3181fd8ec3","title":"Clinical Features and Outcome of Patients With IRAK-4 and MyD88 Deficiency","year":2010,"lang":"en","type":"article","venue":"Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":428,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Toronto; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; Wellcome Trust; Howard Hughes Medical Institute","keywords":"Medicine; Staphylococcus aureus; Internal medicine; Immunology; Antibiotics; Pseudomonas aeruginosa; Respiratory tract infections; Gastroenterology; Respiratory system; Microbiology","score_opus":0.009964149488091574,"score_gpt":0.2811765719944211,"score_spread":0.2712124225063295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087098495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99896896,0.00035998752,0.000061016657,0.00004680608,0.0000064826927,0.0000071016298,0.00007472973,0.0000051817487,0.00046984278],"genre_scores_gemma":[0.99963737,0.00008222508,0.00003524511,0.000029064506,0.000015813932,0.000004932277,0.000121801575,0.0000016425636,0.000071900155],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996278,0.00007484438,0.000052456347,0.000076096476,0.000048866397,0.00011988327],"domain_scores_gemma":[0.99883777,0.00022850082,0.00037870873,0.0000575221,0.00010144818,0.00039604245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029156765,0.0005349941,0.00058683474,0.0007404347,0.000710367,0.0004645191,0.00026891552,0.0005829922,0.0010272298],"category_scores_gemma":[0.002394199,0.00030034274,0.0003004221,0.0005642505,0.0005797208,0.00040312766,0.0005104019,0.00041778767,0.00027367758],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062648364,0.00004790223,0.97514457,0.000026553156,0.000050361123,0.01893984,0.0003095269,0.00016550266,0.0014515689,0.00005748542,0.00026905476,0.002911002],"study_design_scores_gemma":[0.000091995535,0.0007365158,0.8833014,0.000036216607,0.00007089217,0.11370117,0.00048457563,0.000360895,0.00040195414,0.00018099153,0.0006095452,0.000023915283],"about_ca_topic_score_codex":0.0009702085,"about_ca_topic_score_gemma":0.00073068193,"teacher_disagreement_score":0.0010272298,"about_ca_system_score_codex":0.00032360488,"about_ca_system_score_gemma":0.00024163655,"threshold_uncertainty_score":0.0034363866},"labels":[],"label_agreement":null},{"id":"W2087130689","doi":"10.1016/j.molimm.2009.02.008","title":"Synergistic BM-DC activation and immune induction by the oral vaccine vector Streptococcus gordonii and exogenous tumor necrosis factor","year":2009,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Streptococcus gordonii; Tumor necrosis factor alpha; Immune system; Immunology; Cancer research; Medicine; Biology; Streptococcus; Bacteria; Genetics","score_opus":0.00605269091848192,"score_gpt":0.21332822196504297,"score_spread":0.20727553104656105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087130689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960569,0.0011271252,0.000752028,0.000092386326,0.00008638183,0.000038011214,0.00008490135,0.000046331807,0.001716033],"genre_scores_gemma":[0.9971181,0.00033794562,0.00062590314,0.000039064125,0.000016632044,0.000030066865,0.00009938672,0.00000805615,0.0017248989],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99952185,0.00008377832,0.00002369566,0.000048721715,0.000088764595,0.00023319498],"domain_scores_gemma":[0.9998542,0.000027533877,0.00004233285,0.000022227061,0.000011278498,0.00004233826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028148363,0.00064859574,0.000425721,0.000272442,0.00015142192,0.00033739992,0.00017790758,0.0004416411,0.0015762819],"category_scores_gemma":[0.0001841447,0.0001959669,0.00031592176,0.00017935653,0.00037728113,0.00022912343,0.00040264468,0.0008944234,0.0004373238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012646113,0.0001724025,0.00026279144,0.000058038455,0.000007012665,0.00014182052,0.000021750002,0.00014625947,0.99486285,0.00022458308,0.00008414785,0.0027536787],"study_design_scores_gemma":[0.00014651945,0.0019118123,0.003571574,0.0000155232,0.000042075313,0.00030290097,0.00009315945,0.00090334844,0.9910194,0.00012327143,0.0018641596,0.000006210331],"about_ca_topic_score_codex":0.00047259507,"about_ca_topic_score_gemma":0.0010106262,"teacher_disagreement_score":0.0015762819,"about_ca_system_score_codex":0.00038233853,"about_ca_system_score_gemma":0.0005888422,"threshold_uncertainty_score":0.0052731633},"labels":[],"label_agreement":null},{"id":"W2087226517","doi":"10.2353/ajpath.2007.061043","title":"Neutrophil Elastase Converts Human Immature Dendritic Cells into Transforming Growth Factor-β1-Secreting Cells and Reduces Allostimulatory Ability","year":2007,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Agencia Nacional de Promoción Científica y Tecnológica; National Institutes of Health; National Institute of Dental and Craniofacial Research; Secretaría de Ciencia y Técnica, Universidad de Buenos Aires; Fundación Florencio Fiorini","keywords":"Elastase; Immunology; Neutrophil elastase; Biology; Cell biology; Dendritic cell; Transforming growth factor; Growth factor; Inflammation; Immune system; Receptor; Enzyme; Biochemistry","score_opus":0.00556892603735479,"score_gpt":0.24139499023747754,"score_spread":0.23582606420012275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087226517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974884,0.00059937255,0.0008290622,0.000056256536,0.000045099325,0.000015935673,0.00018566722,0.000055270913,0.00072500156],"genre_scores_gemma":[0.99627644,0.0005173616,0.0006406079,0.000047817266,0.000023809664,0.000016942598,0.00065849087,0.000018130218,0.0018004809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997967,0.000027755059,0.000019769943,0.000026209911,0.000041828232,0.00008776094],"domain_scores_gemma":[0.9998141,0.000051307914,0.000029779452,0.000044303222,0.000013037302,0.000047559162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014735432,0.00033841,0.00026758562,0.0002521271,0.00011922566,0.00039666952,0.00019953896,0.00026510996,0.0020594862],"category_scores_gemma":[0.00020448156,0.00015075905,0.00030846713,0.00015197838,0.00015854715,0.00015027769,0.00017053277,0.0008870892,0.00064194936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028983215,0.00009845556,0.00021580729,0.000009559961,0.0000037996085,0.00008273484,0.00000720342,0.0000389803,0.99797195,0.000067341825,0.00004367298,0.0011706877],"study_design_scores_gemma":[0.000042641903,0.00034613893,0.0029923662,0.000001857291,0.000010382894,0.00043101356,0.0000140189595,0.00034435847,0.9949266,0.00004655039,0.0008416243,0.0000023708287],"about_ca_topic_score_codex":0.00033040778,"about_ca_topic_score_gemma":0.000256442,"teacher_disagreement_score":0.0020594862,"about_ca_system_score_codex":0.00019582943,"about_ca_system_score_gemma":0.00017272992,"threshold_uncertainty_score":0.006889701},"labels":[],"label_agreement":null},{"id":"W2087495866","doi":"10.1038/sj.cdd.4401890","title":"TIR, CARD and PYRIN: three domains for an antimicrobial triad","year":2006,"lang":"en","type":"review","venue":"Cell Death and Differentiation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":151,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pyrin domain; Innate immune system; NOD2; Cell biology; Inflammasome; Biology; NOD1; NALP3; G protein-coupled receptor; Receptor; Intracellular; Signal transduction; Nod; TLR4; Genetics; Gene","score_opus":0.03366502483937963,"score_gpt":0.278256293776886,"score_spread":0.24459126893750635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087495866","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010615187,0.991776,0.002448716,0.000854381,0.0011741389,0.000017961505,0.00007781034,0.000108791544,0.002480609],"genre_scores_gemma":[0.0062440676,0.97995466,0.0043969494,0.0012688183,0.0010489516,0.000055145312,0.0003806598,0.000014412649,0.006636309],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997876,0.000025027673,0.000028679104,0.000042322925,0.00008179053,0.000034565935],"domain_scores_gemma":[0.9998128,0.000050395178,0.00003997383,0.000009567908,0.000035667643,0.000051662497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005736623,0.0014627296,0.0016193644,0.0011068813,0.00031924134,0.0016151443,0.0016312461,0.0019389386,0.002453741],"category_scores_gemma":[0.00048626607,0.00035362228,0.00034616154,0.0014295024,0.0011478355,0.0022135621,0.0008801625,0.0029844418,0.004131105],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055521086,0.00009753203,0.00028337148,0.0058782413,0.00006066502,0.0008366015,0.00010133856,0.0008113415,0.05166791,0.008463367,0.050483946,0.8807606],"study_design_scores_gemma":[0.000057468904,0.00010903632,0.00067955867,0.00036955418,0.000052578696,0.002863164,0.00009251084,0.00014524977,0.0046626837,0.0024028257,0.9885358,0.000029503033],"about_ca_topic_score_codex":0.00028388284,"about_ca_topic_score_gemma":0.0003525428,"teacher_disagreement_score":0.002453741,"about_ca_system_score_codex":0.0007226814,"about_ca_system_score_gemma":0.0007591644,"threshold_uncertainty_score":0.008208573},"labels":[],"label_agreement":null},{"id":"W2088264170","doi":"10.2460/javma.233.4.565","title":"Issues regarding the use of vancomycin in companion animals","year":2008,"lang":"en","type":"article","venue":"Journal of the American Veterinary Medical Association","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Vancomycin; Medicine; Intensive care medicine; Biology; Staphylococcus aureus; Genetics; Bacteria","score_opus":0.053607731544251476,"score_gpt":0.29788551870885366,"score_spread":0.2442777871646022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088264170","genre_codex":"commentary","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060790535,0.15005197,0.018391844,0.70809454,0.018665416,0.00017646441,0.00029468798,0.00050407526,0.043030556],"genre_scores_gemma":[0.511638,0.08426263,0.046796013,0.31490022,0.031947333,0.00031066473,0.00021008583,0.0003456058,0.009589406],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9765636,0.0108165275,0.004121846,0.0011903082,0.00660435,0.0007034529],"domain_scores_gemma":[0.9385607,0.033279274,0.011841751,0.0021921357,0.011105671,0.0030204514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.024471814,0.00042379886,0.0010347093,0.0011958207,0.001861356,0.0045970855,0.0030155259,0.012168875,0.0031968092],"category_scores_gemma":[0.05837297,0.00044643323,0.001373732,0.0011081346,0.0047935834,0.0031296515,0.0012974779,0.0097645195,0.0013932441],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023437648,0.0010414383,0.038070142,0.0035952707,0.00047704717,0.009700753,0.004609022,0.0012209873,0.013839628,0.021000197,0.23524648,0.66885525],"study_design_scores_gemma":[0.00027333826,0.0034373791,0.035909023,0.012642572,0.00054508063,0.02382889,0.009616777,0.002225101,0.0081239985,0.00972741,0.89347464,0.00019586201],"about_ca_topic_score_codex":0.0048971195,"about_ca_topic_score_gemma":0.013078162,"teacher_disagreement_score":0.024471814,"about_ca_system_score_codex":0.0019093417,"about_ca_system_score_gemma":0.0046338974,"threshold_uncertainty_score":0.12942088},"labels":[],"label_agreement":null},{"id":"W2088335856","doi":"10.1371/journal.pone.0048468","title":"Anti-Inflammatory Activity of a Novel Family of Aryl Ureas Compounds in an Endotoxin-Induced Airway Epithelial Cell Injury Model","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Instituto de Salud Carlos III; Agencia Canaria de Investigación, Innovación y Sociedad de la Información; Fundación Canaria de Investigación y Salud","keywords":"TLR4; ARDS; Lipopolysaccharide; Pharmacology; A549 cell; Cytokine; Tumor necrosis factor alpha; Chemistry; Cell culture; In vitro; Medicine; Immunology; Receptor; Biology; Biochemistry; Lung; Internal medicine","score_opus":0.045837157030946166,"score_gpt":0.24553807677371184,"score_spread":0.19970091974276566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088335856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909711,0.00493414,0.0016422885,0.000077206045,0.000029625511,0.00008372464,0.00045096697,0.00006775936,0.0017431843],"genre_scores_gemma":[0.98820645,0.004291324,0.0044324435,0.0001289256,0.000019588637,0.00008493431,0.0009539195,0.000010883499,0.0018715813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999546,0.000007002193,0.000004979591,0.000009900587,0.0000135197015,0.000010011991],"domain_scores_gemma":[0.9999418,0.000008358661,0.000019568508,0.0000043186947,0.000011518585,0.000014428953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011007173,0.00031121995,0.00024990877,0.00029093924,0.00009356532,0.000114824055,0.00017824785,0.00016517172,0.001014599],"category_scores_gemma":[0.00008744903,0.00008103013,0.00023886989,0.00020456951,0.000112570335,0.00011065253,0.00012434198,0.00025980396,0.00013855922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002885454,0.00013525064,0.0003525489,0.00017799533,0.0000106188345,0.0001053091,0.000014281914,0.00023555668,0.9916859,0.00004621594,0.00010544305,0.0068422696],"study_design_scores_gemma":[0.0001701057,0.010494027,0.010789361,0.00005615197,0.00010677988,0.0010009966,0.000055573197,0.0012439332,0.9707792,0.000035033572,0.0052519543,0.000016877382],"about_ca_topic_score_codex":0.000415784,"about_ca_topic_score_gemma":0.0012856905,"teacher_disagreement_score":0.001014599,"about_ca_system_score_codex":0.000110462766,"about_ca_system_score_gemma":0.00019084156,"threshold_uncertainty_score":0.003394127},"labels":[],"label_agreement":null},{"id":"W2088373175","doi":"10.1001/archsurg.135.8.959","title":"Decreased Systemic Polymorphonuclear Neutrophil (PMN) Rolling Without Increased PMN Adhesion in Peritonitis at Remote Sites","year":2000,"lang":"en","type":"article","venue":"Archives of Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital","funders":"","keywords":"Medicine; Peritonitis; Adhesion; Polymorphonuclear leukocyte; Neutrophile; Granulocyte; Surgery; Immunology; Inflammation; In vitro; Biochemistry; Composite material","score_opus":0.014168300432062101,"score_gpt":0.21256306923741086,"score_spread":0.19839476880534876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088373175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99897397,0.00035183935,0.00050791254,0.000009917286,0.0000028434076,0.000010775981,0.00003547069,0.0000112948965,0.00009602658],"genre_scores_gemma":[0.9988796,0.00020104257,0.00055001536,0.000020040481,0.0000053115464,0.000017001585,0.000098891374,0.0000034223676,0.0002245994],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99974996,0.00003412889,0.000018710667,0.000065768596,0.000075317825,0.000056130426],"domain_scores_gemma":[0.99951744,0.00004325716,0.00020408924,0.000044797966,0.000036365862,0.00015400397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003140398,0.00032974945,0.0005334459,0.0005696882,0.00016438158,0.00031938378,0.00017425766,0.00035886557,0.0017164742],"category_scores_gemma":[0.00045663008,0.00018302491,0.00017769124,0.00017607467,0.0003471222,0.00032823798,0.00032323858,0.0006033079,0.00022961266],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019014772,0.0002332295,0.014970583,0.000104736006,0.000022018165,0.0002678691,0.00005458474,0.000068287496,0.9779048,0.000028510474,0.00004733183,0.004396582],"study_design_scores_gemma":[0.00023825419,0.012142252,0.6275771,0.000046263416,0.00017448362,0.005124189,0.0002173507,0.0011380344,0.3522891,0.00010837625,0.00092520483,0.000019450143],"about_ca_topic_score_codex":0.00024215062,"about_ca_topic_score_gemma":0.0002905088,"teacher_disagreement_score":0.0017164742,"about_ca_system_score_codex":0.00021503694,"about_ca_system_score_gemma":0.00014797188,"threshold_uncertainty_score":0.0057421327},"labels":[],"label_agreement":null},{"id":"W2088480241","doi":"10.1016/j.vaccine.2004.03.035","title":"Protollin™: a novel adjuvant for intranasal vaccines","year":2004,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SNC-Lavalin (Canada)","funders":"","keywords":"Adjuvant; Nasal administration; Immunization; Hemagglutinin (influenza); Antigen; Immunology; Splenocyte; Influenza vaccine; Virology; Vaccination; Medicine; Virus; Influenza A virus; Recombinant DNA; Biology","score_opus":0.011760413497190605,"score_gpt":0.24589497765530047,"score_spread":0.23413456415810985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088480241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8121439,0.09750834,0.06251622,0.003390865,0.005548939,0.0005083829,0.0008444077,0.00080970506,0.016729131],"genre_scores_gemma":[0.8555298,0.038144447,0.05950232,0.00096409867,0.0010225682,0.00034564463,0.0012258865,0.00008764688,0.043177642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999018,0.000013695967,0.000005309452,0.000014552221,0.000032977845,0.000031633954],"domain_scores_gemma":[0.99994123,0.000008741755,0.000011610426,0.00000406937,0.000012360106,0.000021996393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002389093,0.0005600869,0.00041403482,0.00030935567,0.00025571248,0.0005097783,0.00038491777,0.00063134363,0.0019016059],"category_scores_gemma":[0.00013123524,0.0001943191,0.00030287754,0.00015994471,0.00021762183,0.00048576642,0.00035956554,0.00085763464,0.00096014654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010338083,0.00029196424,0.00032685944,0.00029300916,0.00003381337,0.0002604147,0.000037892296,0.0008644483,0.93558705,0.0019829327,0.0021959513,0.057091895],"study_design_scores_gemma":[0.0003639663,0.005457259,0.0011219074,0.000097258315,0.00023204707,0.0016402602,0.00006630537,0.004180185,0.88502043,0.0011989722,0.10058286,0.00003849421],"about_ca_topic_score_codex":0.00028509874,"about_ca_topic_score_gemma":0.000609822,"teacher_disagreement_score":0.0019016059,"about_ca_system_score_codex":0.000309389,"about_ca_system_score_gemma":0.00039687264,"threshold_uncertainty_score":0.0063614845},"labels":[],"label_agreement":null},{"id":"W2088672001","doi":"10.1002/art.23967","title":"Toll‐like receptor 2 variants are associated with acute reactive arthritis","year":2008,"lang":"en","type":"article","venue":"Arthritis & Rheumatism","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; Ministry of Health and Long Term Care; University of Toronto; Western University; University Health Network","funders":"","keywords":"Medicine; Genotyping; Single-nucleotide polymorphism; Arthritis; Cohort; Internal medicine; Salmonella infection; Immunology; Genotype; Salmonella; Reactive arthritis; Outbreak; Pathology; Biology; Gene; Genetics","score_opus":0.00819583940299651,"score_gpt":0.19853872835727907,"score_spread":0.19034288895428256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088672001","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987488,0.00047668195,0.00021791158,0.000060589296,0.000012251607,0.0000062738213,0.0001349953,0.0000125013285,0.00033002754],"genre_scores_gemma":[0.99941623,0.00010177214,0.00018329173,0.000023731262,0.000021144071,0.0000036444437,0.00008832189,0.0000027842634,0.00015911226],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995957,0.00013705813,0.000054934386,0.00010584397,0.000058871276,0.00004758375],"domain_scores_gemma":[0.99868435,0.00029923246,0.000707796,0.00006636284,0.00009047044,0.00015175054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049787696,0.00052792707,0.00028317567,0.0005546663,0.00025579392,0.00031768592,0.00031024174,0.0005097521,0.0037986506],"category_scores_gemma":[0.0017498027,0.00023048256,0.0003444241,0.0004991276,0.00022390002,0.00013201933,0.00026297217,0.00039711525,0.00036098162],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015907638,0.000117544834,0.979222,0.00009359969,0.00031601166,0.0019365178,0.00013254418,0.00014536266,0.011828003,0.00008056895,0.0002629308,0.0042742924],"study_design_scores_gemma":[0.00006207852,0.0003177294,0.99366814,0.000018495868,0.00013209498,0.0044071595,0.00008358431,0.0003515829,0.0005473561,0.000083990955,0.00031899,0.0000087898325],"about_ca_topic_score_codex":0.00061356893,"about_ca_topic_score_gemma":0.0004927257,"teacher_disagreement_score":0.0037986506,"about_ca_system_score_codex":0.000073620045,"about_ca_system_score_gemma":0.000099199446,"threshold_uncertainty_score":0.01270777},"labels":[],"label_agreement":null},{"id":"W2088741862","doi":"10.1016/j.it.2015.03.005","title":"Alveolar macrophages and type I IFN in airway homeostasis and immunity","year":2015,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":121,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; Christie (Canada)","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Immune system; Biology; Immunity; Macrophage; Inflammation; Homeostasis; Cell biology","score_opus":0.04257601693322746,"score_gpt":0.33207626696318854,"score_spread":0.28950025002996105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088741862","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012991516,0.9974861,0.00016097861,0.0005495866,0.0007337796,0.0000039530983,0.000018147663,0.00000754579,0.00091006677],"genre_scores_gemma":[0.0008763847,0.9962819,0.00020122739,0.0004162087,0.000889571,0.000006717482,0.000035960635,0.0000015589305,0.0012904092],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985003,0.000018548637,0.000022029992,0.00002562567,0.000062489096,0.000021306412],"domain_scores_gemma":[0.99972755,0.00007831482,0.00005026676,0.000008784736,0.00008297458,0.000052147327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006467187,0.0009324481,0.0011774662,0.0011657558,0.0002014931,0.0011742366,0.0006759282,0.0013695876,0.0035084514],"category_scores_gemma":[0.000720838,0.00026077675,0.0003053786,0.001195614,0.0005585558,0.0015697507,0.0009982241,0.0022805007,0.0021472832],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014205332,0.000048498954,0.00020908266,0.007498482,0.000049887763,0.0001523805,0.00003974404,0.00023084329,0.0025504418,0.0026058713,0.04523895,0.9412338],"study_design_scores_gemma":[0.00003179772,0.00007866717,0.00086427876,0.002527036,0.00010275889,0.0006538559,0.00006486345,0.0001066704,0.000538203,0.0025080065,0.99250704,0.000016884036],"about_ca_topic_score_codex":0.00060422346,"about_ca_topic_score_gemma":0.0014159334,"teacher_disagreement_score":0.0035084514,"about_ca_system_score_codex":0.000501961,"about_ca_system_score_gemma":0.0013802798,"threshold_uncertainty_score":0.011736929},"labels":[],"label_agreement":null},{"id":"W2088940517","doi":"10.1111/j.1574-695x.2006.00077.x","title":"Role of SLC11A1 (formerly NRAMP1) in regulation of signal transduction induced by Toll-like receptor 7 ligands","year":2006,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Notre-Dame; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Signal transduction; Toll-like receptor; Receptor; Cell biology; Transduction (biophysics); Toll; Genetics; Biochemistry; Innate immune system","score_opus":0.003839558222077721,"score_gpt":0.20193637833613326,"score_spread":0.19809682011405555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088940517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99077386,0.0055702594,0.001712902,0.00037645356,0.000031262418,0.00002112942,0.0002671522,0.00004929031,0.0011976565],"genre_scores_gemma":[0.99548835,0.0018004477,0.00092458585,0.00009074255,0.000014686616,0.000017716655,0.00024468312,0.000013166554,0.0014055587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984205,0.000046977984,0.000014715579,0.000031251613,0.000028349012,0.000036614623],"domain_scores_gemma":[0.9998109,0.000034747296,0.00006742482,0.000010197786,0.000029527499,0.00004715714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014680596,0.00023700307,0.0002328222,0.00016762126,0.00015183541,0.0002741079,0.00015349886,0.0003714327,0.0010807064],"category_scores_gemma":[0.00018919987,0.00010676218,0.00022462381,0.00010771666,0.00026519565,0.00023008646,0.00013795121,0.00026068403,0.00029578788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035915695,0.00001983196,0.0014814774,0.00010964648,0.000008854273,0.00035600242,0.00003980418,0.00007109756,0.99571085,0.00014165364,0.000070238624,0.0016313496],"study_design_scores_gemma":[0.00010388816,0.001091718,0.17844494,0.00008854016,0.00009322569,0.0035150393,0.0005010498,0.0057382016,0.79847777,0.0006121752,0.011292085,0.000041437117],"about_ca_topic_score_codex":0.00062134844,"about_ca_topic_score_gemma":0.00055636215,"teacher_disagreement_score":0.0010807064,"about_ca_system_score_codex":0.00029615188,"about_ca_system_score_gemma":0.00017615494,"threshold_uncertainty_score":0.0036152601},"labels":[],"label_agreement":null},{"id":"W2089060011","doi":"10.1371/journal.pone.0005601","title":"Lipoteichoic Acid Induces Unique Inflammatory Responses when Compared to Other Toll-Like Receptor 2 Ligands","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Heritage Foundation for Medical Research","keywords":"Lipoteichoic acid; TLR2; In vivo; Cell biology; Biology; Receptor; Toll-like receptor; Ligand (biochemistry); Signal transduction; Stimulation; TLR4; Innate immune system; Biochemistry; Neuroscience; Genetics","score_opus":0.031862956251094664,"score_gpt":0.23688540392839022,"score_spread":0.20502244767729555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089060011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99697435,0.0012235662,0.00104088,0.000037356163,0.000025149295,0.00002285966,0.00014821136,0.000027062692,0.000500518],"genre_scores_gemma":[0.9959728,0.00088101433,0.0014182624,0.0000741142,0.000025399055,0.00005576297,0.00033055467,0.000009666484,0.0012323669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997379,0.00006652871,0.000024541203,0.000045235138,0.000047163907,0.000078580546],"domain_scores_gemma":[0.99981004,0.00003402827,0.00005375438,0.000024309424,0.000022939923,0.00005505164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025082182,0.00048721832,0.00030057452,0.0002594715,0.00011968939,0.00032445844,0.00007806486,0.0003119736,0.0008262572],"category_scores_gemma":[0.00020169819,0.00012791863,0.0002847315,0.00015509369,0.000223302,0.00020757806,0.0001793762,0.00047745844,0.00024815532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022049202,0.000018812787,0.00013943826,0.000023681307,0.0000026352416,0.00003525336,0.0000069592643,0.000024318173,0.99919647,0.00001655061,0.0000046161713,0.00031079297],"study_design_scores_gemma":[0.000025162126,0.0012063116,0.0071829553,0.0000069658204,0.000019002304,0.000260056,0.000043085212,0.00038581507,0.98996407,0.000043548796,0.00085817254,0.0000048879547],"about_ca_topic_score_codex":0.00022507636,"about_ca_topic_score_gemma":0.00031856608,"teacher_disagreement_score":0.0008262572,"about_ca_system_score_codex":0.0001765873,"about_ca_system_score_gemma":0.00016994902,"threshold_uncertainty_score":0.0027641654},"labels":[],"label_agreement":null},{"id":"W2089128705","doi":"10.1016/j.surg.2004.05.029","title":"The role of the Src family of tyrosine kinases after oxidant-induced lung injury in vivo","year":2004,"lang":"en","type":"article","venue":"Surgery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Resuscitation; In vivo; Lipopolysaccharide; Proto-oncogene tyrosine-protein kinase Src; Kinase; Western blot; Pharmacology; Lung; Shock (circulatory); Ex vivo; Immunology; Internal medicine; Endocrinology; Anesthesia; Biology; Cell biology; Receptor; Biochemistry","score_opus":0.005817533884912157,"score_gpt":0.20869510056547164,"score_spread":0.20287756668055948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089128705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858182,0.009254768,0.0017626433,0.0004331353,0.00014910968,0.00001946964,0.00015735188,0.00004825294,0.0023570247],"genre_scores_gemma":[0.9927704,0.002917416,0.0005850793,0.000062347004,0.000086730455,0.000024392255,0.00025943923,0.000010652611,0.0032835566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973184,0.00006431495,0.000011571718,0.00002893574,0.00004510301,0.0001183179],"domain_scores_gemma":[0.99974877,0.000042412186,0.000064023945,0.000043081396,0.0000307146,0.00007095988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054091436,0.00049293146,0.00040169564,0.00047310037,0.00035280216,0.0004743987,0.00024080445,0.0005759858,0.0018181405],"category_scores_gemma":[0.00031773438,0.00017142486,0.00041548745,0.0001873137,0.00048786268,0.0006821196,0.00018691117,0.0010414192,0.00047228753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003247228,0.00025844827,0.00081798376,0.00009751398,0.000025115412,0.0002586204,0.00006894107,0.000105880405,0.98703265,0.00073545595,0.00024246366,0.007109755],"study_design_scores_gemma":[0.00023973445,0.004829977,0.06394646,0.00004907418,0.00014888629,0.0017134576,0.0003797171,0.0021304996,0.92042196,0.0012764146,0.0048367805,0.000027063008],"about_ca_topic_score_codex":0.00031489306,"about_ca_topic_score_gemma":0.00050814345,"teacher_disagreement_score":0.0018181405,"about_ca_system_score_codex":0.0002817062,"about_ca_system_score_gemma":0.0002747576,"threshold_uncertainty_score":0.0060822964},"labels":[],"label_agreement":null},{"id":"W2089353762","doi":"10.1080/08982100802129232","title":"Structural Characterization of Archaeal Lipid Mucosal Vaccine Adjuvant and Delivery (AMVAD) Formulations Prepared by Different Protocols and Their Efficacy Upon Intranasal Immunization of Mice","year":2008,"lang":"en","type":"article","venue":"Journal of Liposome Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Ovalbumin; Nasal administration; Adjuvant; Liposome; Immunization; Antigen; Immunopotentiator; Antibody; Immune system; Chemistry; Biology; Microbiology; Immunology; Biochemistry","score_opus":0.03560153983244922,"score_gpt":0.3048143447436766,"score_spread":0.26921280491122734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089353762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733776,0.000720215,0.0015426478,0.00002415505,0.000009264183,0.00002693072,0.00011782975,0.00000786289,0.00021332936],"genre_scores_gemma":[0.9939459,0.0006451253,0.0042697187,0.000038399256,0.0000053309977,0.00004675594,0.00043782478,0.000011434,0.0005995775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998945,0.000025126517,0.000015405698,0.000019326484,0.000027536957,0.000018103321],"domain_scores_gemma":[0.9998934,0.000022663791,0.000031265354,0.0000141907685,0.00002196677,0.000016581089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023214659,0.00016809517,0.00012893137,0.00017393877,0.00011040201,0.00019880592,0.000112970905,0.00022867972,0.0003291326],"category_scores_gemma":[0.00037748046,0.00012059696,0.00014446263,0.00013149291,0.00017735914,0.00017185758,0.00016009592,0.00027018302,0.00013266214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012746136,0.000015709602,0.00022620974,0.000027275317,0.000003760727,0.000016076885,0.000013395053,0.00007671923,0.9984409,0.000032793243,0.0000051498137,0.0010144884],"study_design_scores_gemma":[0.000015687567,0.00047554425,0.003370561,0.000004730267,0.000014567342,0.00009593573,0.000018399469,0.0004272582,0.99457693,0.000022133376,0.00097356946,0.0000046870364],"about_ca_topic_score_codex":0.00023696806,"about_ca_topic_score_gemma":0.00026208762,"teacher_disagreement_score":0.0003291326,"about_ca_system_score_codex":0.00014163928,"about_ca_system_score_gemma":0.00013411709,"threshold_uncertainty_score":0.0012277365},"labels":[],"label_agreement":null},{"id":"W2089580397","doi":"10.1089/154545703322460621","title":"Bovine and Ovine Blood Mononuclear Leukocytes Differ Markedly in Innate Immune Responses Induced by Class A and Class B CpG-Oligodeoxynucleotide","year":2003,"lang":"en","type":"article","venue":"Oligonucleotides","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Innate immune system; Immunology; Peripheral blood mononuclear cell; Immune system; CpG Oligodeoxynucleotide; Class (philosophy); Peripheral blood; CpG site; Genetics; Gene; Gene expression; In vitro; DNA methylation","score_opus":0.007961812312267476,"score_gpt":0.21360926746381784,"score_spread":0.20564745515155036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089580397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974375,0.00095446093,0.000412853,0.00002360918,0.000010684761,0.000015912203,0.00014346259,0.0000044171,0.0009970226],"genre_scores_gemma":[0.99638957,0.00048696226,0.0008270227,0.00012932265,0.000013328122,0.000045440655,0.0006850916,0.000005007669,0.0014183235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99963343,0.000060272578,0.000027701979,0.00011656597,0.000072945266,0.00008914678],"domain_scores_gemma":[0.99977154,0.000065189895,0.00006461451,0.000017407918,0.00002943095,0.000051891497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025066454,0.00015881617,0.00018072008,0.00022155726,0.00020311146,0.00036829847,0.00011108672,0.00033106707,0.0009489427],"category_scores_gemma":[0.0005065775,0.00015863031,0.00013007598,0.00012406058,0.00019443606,0.00019051212,0.00021899851,0.00025562008,0.00025684622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064963853,0.00005233648,0.008206157,0.000044835404,0.000011903267,0.00012874043,0.00027739911,0.000022125138,0.98789716,0.000058474496,0.000033683988,0.0026176625],"study_design_scores_gemma":[0.00011491034,0.0040414874,0.75548875,0.00008407966,0.00011575527,0.003724313,0.0015684641,0.00066991395,0.2221587,0.00020011557,0.011797477,0.00003593065],"about_ca_topic_score_codex":0.0015859205,"about_ca_topic_score_gemma":0.002813845,"teacher_disagreement_score":0.0015859205,"about_ca_system_score_codex":0.00021855233,"about_ca_system_score_gemma":0.000119424556,"threshold_uncertainty_score":0.0031744838},"labels":[],"label_agreement":null},{"id":"W2089646349","doi":"10.1074/jbc.275.10.6733","title":"T Cells Activated by Zwitterionic Molecules Prevent Abscesses Induced by Pathogenic Bacteria","year":2000,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Pathogenic bacteria; Bacteria; Chemistry; Microbiology; Cell biology; Biology; Genetics","score_opus":0.00917356239057326,"score_gpt":0.219682866612253,"score_spread":0.21050930422167974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089646349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957712,0.0010443501,0.0015504223,0.00006325517,0.00003252376,0.000035601468,0.000030831256,0.000052158626,0.0014195577],"genre_scores_gemma":[0.9962471,0.000809736,0.0013665273,0.000071000555,0.00005253448,0.000027966278,0.000098969766,0.000008339198,0.0013177878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999293,0.00001405598,0.0000051044963,0.0000098763085,0.000013432804,0.000028122404],"domain_scores_gemma":[0.9999068,0.00002264778,0.000025861444,0.000009619267,0.000009120986,0.000025849904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009238096,0.0003850365,0.00014597207,0.00013830367,0.00008380314,0.00018030923,0.00010836562,0.0002263724,0.00145436],"category_scores_gemma":[0.00017342421,0.00006740744,0.00011883103,0.0000751289,0.00019419428,0.00014173941,0.00013607954,0.00038371055,0.00031387218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017018804,0.000060006852,0.00015916687,0.000037030582,0.0000034696477,0.000051015475,0.000014369678,0.00008482385,0.99422175,0.00007105611,0.000035218025,0.00509189],"study_design_scores_gemma":[0.00016606165,0.004501057,0.0041124593,0.000019346418,0.00004147916,0.00065873365,0.00006334559,0.00094665104,0.98457843,0.0003377631,0.0045668874,0.000007816838],"about_ca_topic_score_codex":0.00007516552,"about_ca_topic_score_gemma":0.00014641495,"teacher_disagreement_score":0.00145436,"about_ca_system_score_codex":0.00007169318,"about_ca_system_score_gemma":0.00012234434,"threshold_uncertainty_score":0.0048652887},"labels":[],"label_agreement":null},{"id":"W2089757602","doi":"10.1016/j.exphem.2007.06.008","title":"Discovery and characterization of a novel splice variant of the GM-CSF receptor α subunit","year":2007,"lang":"en","type":"article","venue":"Experimental Hematology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale","keywords":"Ectodomain; Exon; Molecular biology; Biology; Alternative splicing; Alu element; Protein subunit; Receptor; Gene; Biochemistry","score_opus":0.009642872857259649,"score_gpt":0.24397480161691928,"score_spread":0.23433192875965964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089757602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99041826,0.0015107841,0.0061191693,0.00038715685,0.00016299081,0.000034142355,0.0004901104,0.000026387368,0.00085107447],"genre_scores_gemma":[0.9859014,0.001175689,0.007871051,0.00027223318,0.00007092672,0.00001995443,0.0025515486,0.000036057798,0.002101285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998565,0.000019882877,0.000022510125,0.000035257643,0.000036097852,0.000029717192],"domain_scores_gemma":[0.9996685,0.00008734334,0.00006370242,0.00006236725,0.000056857836,0.00006122831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021284899,0.00027926045,0.00029936366,0.00022660327,0.00022934025,0.0007616589,0.00045718602,0.0004781464,0.0010103191],"category_scores_gemma":[0.00054161705,0.00016424448,0.00039152097,0.00014543744,0.000379475,0.0002551847,0.00022197103,0.0008689239,0.00063641404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023467751,0.000020823154,0.000964109,0.000018262128,0.000013022609,0.00088263577,0.000042346073,0.00006558225,0.9947654,0.0005328082,0.00011055398,0.0023498065],"study_design_scores_gemma":[0.00016194241,0.00076804,0.01994261,0.00003774753,0.00018935894,0.026157258,0.00042580982,0.004292805,0.91565394,0.0012915848,0.031038363,0.000040497573],"about_ca_topic_score_codex":0.00067744375,"about_ca_topic_score_gemma":0.0005963223,"teacher_disagreement_score":0.0010103191,"about_ca_system_score_codex":0.0003819016,"about_ca_system_score_gemma":0.00036653414,"threshold_uncertainty_score":0.0033798814},"labels":[],"label_agreement":null},{"id":"W2089757710","doi":"10.1097/ccm.0b013e318267633c","title":"Innate Immune Function and Mortality in Critically Ill Children With Influenza","year":2012,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"Office of Genomics and Precision Public Health; National Institute of Allergy and Infectious Diseases","keywords":"Medicine; Internal medicine; Immunology; Sepsis","score_opus":0.014065192946547712,"score_gpt":0.2889921243522503,"score_spread":0.27492693140570257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089757710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997278,0.00011088931,0.00002927785,0.000011040787,0.0000019334477,0.000002643718,0.00007243594,0.0000011427857,0.000042950043],"genre_scores_gemma":[0.9996331,0.00006706956,0.00006737986,0.000010500994,0.00000587797,0.000007688049,0.00017446163,6.837452e-7,0.00003334727],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997776,0.00004889847,0.000020176643,0.000048651385,0.000046624067,0.0000581347],"domain_scores_gemma":[0.99915266,0.0001330151,0.00041228035,0.00003606384,0.0000811161,0.00018490369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003554247,0.00032898015,0.00035617145,0.00033087967,0.00028098866,0.00033727082,0.00017774141,0.00030766416,0.0007102387],"category_scores_gemma":[0.0014473392,0.0001870499,0.00023711925,0.00032258438,0.00020633648,0.00030748616,0.00025372542,0.000421987,0.00012186626],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008187996,0.00001592269,0.99912614,0.0000042224856,0.000009155934,0.00006193327,0.000022471599,0.000015882088,0.0002676471,0.0000038968196,0.000025451203,0.000365348],"study_design_scores_gemma":[0.0000070408432,0.000269547,0.9986842,0.000004898469,0.000012876425,0.0006159589,0.00010097741,0.00009703756,0.00012343773,0.000004134837,0.00007841557,0.0000014070235],"about_ca_topic_score_codex":0.0013775384,"about_ca_topic_score_gemma":0.0014550748,"teacher_disagreement_score":0.0013775384,"about_ca_system_score_codex":0.00021418938,"about_ca_system_score_gemma":0.00027265016,"threshold_uncertainty_score":0.0027390122},"labels":[],"label_agreement":null},{"id":"W2090279487","doi":"10.1038/labinvest.3700716","title":"NOD2: a potential target for regulating liver injury","year":2008,"lang":"en","type":"article","venue":"Laboratory Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Université de Lyon; Institut Universitaire de France; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Liver injury; NOD2; Muramyl dipeptide; Immune system; Concanavalin A; Biology; Immunology; Innate immune system; Pharmacology; Biochemistry","score_opus":0.01302418572410872,"score_gpt":0.21484310703950524,"score_spread":0.20181892131539653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090279487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8787112,0.04768144,0.035893403,0.007045064,0.0012353482,0.00021253891,0.0010455288,0.00043316543,0.027742395],"genre_scores_gemma":[0.9511275,0.009081487,0.021973182,0.0008111945,0.00057470764,0.00019717723,0.0011736765,0.00002930655,0.01503183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985206,0.000066812645,0.000010114405,0.000019859326,0.000023380062,0.000027758715],"domain_scores_gemma":[0.9998777,0.00001670536,0.000017887707,0.000014303984,0.000019447129,0.000054023312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006069425,0.00044564749,0.0002894422,0.00030104254,0.00024280282,0.0005253036,0.00028410755,0.00048016195,0.0041235336],"category_scores_gemma":[0.00022871244,0.000091885355,0.00016963964,0.00018855782,0.0004201032,0.00065254996,0.00041025266,0.00060414197,0.0006902819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019464807,0.00017535257,0.0019782698,0.00029067256,0.000015303358,0.0005890747,0.000031721633,0.00013081539,0.96442056,0.0025108363,0.0016401361,0.02627075],"study_design_scores_gemma":[0.0004911735,0.0044888393,0.01931659,0.000118445976,0.00009326645,0.007458855,0.00040306806,0.002243096,0.8919142,0.0042791483,0.06916079,0.000032491327],"about_ca_topic_score_codex":0.000059703343,"about_ca_topic_score_gemma":0.000078401776,"teacher_disagreement_score":0.0041235336,"about_ca_system_score_codex":0.00019047088,"about_ca_system_score_gemma":0.00021847089,"threshold_uncertainty_score":0.013794601},"labels":[],"label_agreement":null},{"id":"W2090461035","doi":"10.1016/j.coi.2006.11.005","title":"Innate recognition of intracellular bacteria","year":2006,"lang":"en","type":"review","venue":"Current Opinion in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":148,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Institute of General Medical Sciences; Ellison Medical Foundation; Foundation for the National Institutes of Health","keywords":"Innate immune system; Inflammasome; Biology; Cell biology; Intracellular; Receptor; Peptidoglycan; Pattern recognition receptor; Endosome; Transcription factor; Extracellular; Toll-like receptor; Cytosol; Flagellin; Signal transduction; TLR4; TLR7; Inflammation; Microbiology; Immunology; Bacteria; Gene; Biochemistry; Genetics","score_opus":0.06932131835286237,"score_gpt":0.33581233424558754,"score_spread":0.26649101589272517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090461035","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021099305,0.99167085,0.00090092485,0.00097558607,0.0038071782,0.000012831011,0.000024191542,0.000025869324,0.0023716139],"genre_scores_gemma":[0.0009766007,0.99199194,0.00060714,0.0010276759,0.002199077,0.000017355713,0.0000710151,0.0000040631453,0.0031051212],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99973696,0.00003495958,0.000033685577,0.00005257582,0.000108598666,0.000033164906],"domain_scores_gemma":[0.99967086,0.00009348431,0.00004764059,0.000017911898,0.00010990444,0.000060220595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088292424,0.0015230733,0.0020407934,0.0011185607,0.0003273907,0.0016233635,0.0016016596,0.002028715,0.0035791595],"category_scores_gemma":[0.0006118393,0.0003793963,0.0004078771,0.0011770922,0.0012946677,0.0027804677,0.0012035777,0.003348504,0.00500748],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001968815,0.000062602805,0.00013761673,0.0075090057,0.00004557088,0.0003426468,0.00006330113,0.00019313424,0.0126184905,0.004029083,0.064960524,0.9098411],"study_design_scores_gemma":[0.000022749726,0.000060013957,0.00042509558,0.0010036285,0.000039141458,0.0010360215,0.000056045956,0.000058601487,0.001515157,0.0018949122,0.99387395,0.000014670575],"about_ca_topic_score_codex":0.00051591144,"about_ca_topic_score_gemma":0.0011005349,"teacher_disagreement_score":0.0035791595,"about_ca_system_score_codex":0.00070560427,"about_ca_system_score_gemma":0.00107046,"threshold_uncertainty_score":0.0119735},"labels":[],"label_agreement":null},{"id":"W2090520729","doi":"10.1371/journal.pone.0036734","title":"Muramyl Dipeptide Induces NOD2-Dependent Ly6Chigh Monocyte Recruitment to the Lungs and Protects Against Influenza Virus Infection","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Muramyl dipeptide; NOD2; Monocyte; CCR2; CCL2; Chemokine; Immunology; Inflammation; Influenza A virus; Biology; Innate immune system; Chemokine receptor; Immune system; Virus","score_opus":0.09145033438802588,"score_gpt":0.2725182493479745,"score_spread":0.1810679149599486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090520729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99697196,0.00092848437,0.0007639795,0.00007579001,0.000039466755,0.000050384624,0.00024836205,0.00006128491,0.00086018094],"genre_scores_gemma":[0.9955538,0.0004215397,0.0009878089,0.00009289984,0.00001930359,0.000074340074,0.00050348835,0.00001600351,0.0023307235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998344,0.00003530515,0.000017784672,0.00002419788,0.000028384478,0.000059913124],"domain_scores_gemma":[0.99987745,0.000011752676,0.00002860454,0.000013589416,0.000010615714,0.00005796843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016568312,0.000386158,0.00041876797,0.00014611216,0.00011561708,0.00022580312,0.00015622661,0.00026027774,0.0009723794],"category_scores_gemma":[0.000104297134,0.00014509795,0.00021410018,0.00007401156,0.00020473928,0.00012472375,0.00021774594,0.0007340578,0.00046537808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000470105,0.00008299702,0.00015932471,0.00003878124,0.0000043283467,0.00007217339,0.000012157084,0.000027804577,0.9981077,0.00002392695,0.00004453034,0.000956273],"study_design_scores_gemma":[0.00017410614,0.0031358837,0.012779997,0.000016932228,0.000019944458,0.0005278188,0.00006389151,0.0011031439,0.9802321,0.000043004376,0.0018938963,0.000009204524],"about_ca_topic_score_codex":0.00030158376,"about_ca_topic_score_gemma":0.00061891275,"teacher_disagreement_score":0.0009723794,"about_ca_system_score_codex":0.00014772461,"about_ca_system_score_gemma":0.00019098553,"threshold_uncertainty_score":0.003252983},"labels":[],"label_agreement":null},{"id":"W2090537302","doi":"10.1111/j.1600-6143.2005.00829.x","title":"Innate Immunity and Organ Transplantation: The Potential Role of Toll-like Receptors","year":2005,"lang":"en","type":"review","venue":"American Journal of Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":117,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Canadian Institutes of Health Research; Government of Ontario","keywords":"Medicine; Innate immune system; Immunity; Transplantation; Immunology; Toll; Receptor; Organ transplantation; Immune system; Internal medicine","score_opus":0.007716769117064478,"score_gpt":0.2553226043243097,"score_spread":0.24760583520724522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090537302","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00062861235,0.99698395,0.00034448216,0.0009601024,0.00039448042,0.0000030831482,0.000006761371,0.0000046859664,0.00067378895],"genre_scores_gemma":[0.00832403,0.9880442,0.00039910575,0.0009124368,0.0013238201,0.000008610237,0.000022198099,0.0000022730633,0.0009633228],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996761,0.00011216593,0.000033291766,0.000055597167,0.00007264139,0.000050239163],"domain_scores_gemma":[0.99976546,0.000117005846,0.000038548354,0.0000063322473,0.00004225649,0.000030434989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006924483,0.00045614387,0.0010303982,0.0006896329,0.00023296296,0.0012833903,0.0005561029,0.0013049323,0.0027644576],"category_scores_gemma":[0.00046891347,0.000110594294,0.00046644395,0.0008906828,0.0006937786,0.0018458711,0.00082605885,0.0017375561,0.00052099826],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005227623,0.00016943,0.0014146555,0.027906263,0.00024145226,0.003230378,0.00070934143,0.00071344397,0.028355004,0.030054249,0.03459665,0.8720862],"study_design_scores_gemma":[0.00004376535,0.0007435034,0.006163651,0.006339491,0.00023322928,0.013889215,0.0010117665,0.00045428608,0.0055996887,0.027187135,0.93825334,0.000080919584],"about_ca_topic_score_codex":0.00023802553,"about_ca_topic_score_gemma":0.0003112496,"teacher_disagreement_score":0.0027644576,"about_ca_system_score_codex":0.00041107697,"about_ca_system_score_gemma":0.00071902166,"threshold_uncertainty_score":0.009248078},"labels":[],"label_agreement":null},{"id":"W2090540884","doi":"10.3389/fimmu.2013.00094","title":"The Regulation of Immune Responses by DC Derived Type I IFN","year":2013,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lymphotoxin; Immune system; Biology; Immunology; Cell biology; Receptor; Pattern recognition receptor; Tumor necrosis factor alpha; Cytokine; Autoimmunity; Cell type; Interferon; Innate immune system; Cell; Genetics","score_opus":0.005407072893891454,"score_gpt":0.2060055252611414,"score_spread":0.20059845236724996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090540884","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41586682,0.46871442,0.053776044,0.00534848,0.0030870973,0.00030413747,0.001457688,0.0004659222,0.05097944],"genre_scores_gemma":[0.8296503,0.13910013,0.015174849,0.0016233944,0.0010523022,0.00018159232,0.0005229921,0.00004975824,0.01264472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979,0.00005338338,0.000021077592,0.00004109857,0.0000512787,0.000043182146],"domain_scores_gemma":[0.9998945,0.000019604358,0.00003065168,0.000010654681,0.00002337798,0.000021190535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002896509,0.00033446538,0.00023506542,0.00023423096,0.000121602294,0.0005442877,0.00017793811,0.0003974699,0.000712719],"category_scores_gemma":[0.00024778696,0.00009553118,0.000218429,0.00014571716,0.00022343638,0.0002785186,0.00029296923,0.0007235642,0.00045973694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031684776,0.00005762736,0.0018836012,0.00076764636,0.000024861996,0.0003713841,0.000075498545,0.0005155523,0.90261763,0.004980263,0.0018407338,0.08654829],"study_design_scores_gemma":[0.000115784576,0.0008188531,0.018963907,0.00050376006,0.00010181593,0.002196274,0.00032451656,0.0033487936,0.74545497,0.008787526,0.21934749,0.000036273406],"about_ca_topic_score_codex":0.0002168211,"about_ca_topic_score_gemma":0.00021796318,"teacher_disagreement_score":0.000712719,"about_ca_system_score_codex":0.00039349493,"about_ca_system_score_gemma":0.00024482547,"threshold_uncertainty_score":0.0028550029},"labels":[],"label_agreement":null},{"id":"W2090739012","doi":"10.1016/j.vetimm.2005.06.015","title":"Age-related alterations to immune parameters in Labrador retriever dogs","year":2005,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Waltham Centre for Pet Nutrition; University of Nottingham","keywords":"CD8; Immune system; Biology; Concanavalin A; Lymphocyte; CD3; Antibody; Immunology; Internal medicine; Endocrinology; Medicine; In vitro","score_opus":0.013408401733398103,"score_gpt":0.24804031200413051,"score_spread":0.2346319102707324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090739012","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99927574,0.0003321846,0.00003121408,0.000010860795,0.0000040900018,0.0000033741503,0.00013316084,0.000003077002,0.0002063797],"genre_scores_gemma":[0.99914,0.00022443822,0.00004500908,0.000017285309,0.00001019913,0.0000051197953,0.00024599157,0.0000023623477,0.00030953105],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979836,0.000036157286,0.000027159129,0.00005119088,0.000035280584,0.00005183294],"domain_scores_gemma":[0.99918336,0.00010814776,0.00044956748,0.00005530615,0.000095464544,0.000108189946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039213538,0.00021351466,0.00036245753,0.00090157817,0.00018110372,0.00027239605,0.00016271436,0.00038526373,0.0007422323],"category_scores_gemma":[0.00091347675,0.0001313662,0.0002406626,0.0003943167,0.00025353706,0.0003850767,0.00015594279,0.00025919086,0.00019905154],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009353229,0.0005668874,0.89466107,0.00012046582,0.00018754211,0.0023502947,0.00058641774,0.00032434377,0.07893073,0.00010214445,0.0005162644,0.0123006385],"study_design_scores_gemma":[0.0000071343416,0.0007977091,0.9970149,0.0000035539938,0.000027257098,0.0007173582,0.0000964905,0.00007582233,0.0010031937,0.000016726106,0.00023517881,0.000004687998],"about_ca_topic_score_codex":0.0018279655,"about_ca_topic_score_gemma":0.0024737949,"teacher_disagreement_score":0.0018279655,"about_ca_system_score_codex":0.0003600734,"about_ca_system_score_gemma":0.00010816543,"threshold_uncertainty_score":0.0036346316},"labels":[],"label_agreement":null},{"id":"W2091209445","doi":"10.4161/gmic.29100","title":"Polarizing the T helper 17 response in<i>Citrobacter rodentium</i>infection via expression of resistin-like molecule α","year":2014,"lang":"en","type":"article","venue":"Gut Microbes","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Aplastic Anemia and Myelodysplasia Association of Canada","keywords":"Citrobacter rodentium; Biology; Citrobacter; Effector; Microbiology; Immunology; Cytokine; Inflammation; Macrophage; Intestinal mucosa; Pathogen; Immunity; Immune system; Escherichia coli; Enterobacteriaceae; Medicine; Gene; In vitro","score_opus":0.005737929186980082,"score_gpt":0.21192660248971834,"score_spread":0.20618867330273827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091209445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99493486,0.0010516685,0.001959408,0.00022625084,0.00007202147,0.00005883902,0.0001892709,0.00010222208,0.0014055384],"genre_scores_gemma":[0.9930091,0.0008078446,0.0039809435,0.00013871602,0.00002917448,0.00007277184,0.00021322747,0.00003587629,0.0017124275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997106,0.00008123434,0.000033876953,0.000053055195,0.00003582476,0.000085393556],"domain_scores_gemma":[0.999795,0.000025682144,0.00008398635,0.000028144086,0.000015133215,0.00005201659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039598587,0.0006792348,0.00024355194,0.00034515053,0.00015585822,0.00030130355,0.00022237988,0.0004411024,0.0011926594],"category_scores_gemma":[0.00018326801,0.0002328555,0.0002742564,0.00010545954,0.00043506557,0.000256797,0.00019908191,0.0011484392,0.00036727887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032877532,0.00006230227,0.00022836956,0.000042349722,0.0000017875902,0.00010644182,0.000020062827,0.00003160398,0.9981488,0.000067906374,0.00003503023,0.00092664093],"study_design_scores_gemma":[0.00008453995,0.0016272293,0.004114345,0.000020574753,0.000016864089,0.0010930484,0.00010121166,0.00043117427,0.9898996,0.00008151315,0.002521913,0.000007992628],"about_ca_topic_score_codex":0.0001948657,"about_ca_topic_score_gemma":0.00031908188,"teacher_disagreement_score":0.0011926594,"about_ca_system_score_codex":0.0002191441,"about_ca_system_score_gemma":0.00014984397,"threshold_uncertainty_score":0.0039898157},"labels":[],"label_agreement":null},{"id":"W2091774812","doi":"10.1159/000316574","title":"TLR9 Signaling Failure Renders Peyer’s Patch Regulatory B Cells Unresponsive to Stimulation with CpG Oligodeoxynucleotides","year":2010,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health","keywords":"TLR9; CpG Oligodeoxynucleotide; Toll-Like Receptor 9; Stimulation; Cell biology; Signal transduction; Phosphorylation; Biology; Receptor; Agonist; Molecular biology; Immunology; Endocrinology; Gene; Gene expression; Biochemistry","score_opus":0.007611336120836658,"score_gpt":0.2288264114344485,"score_spread":0.22121507531361184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091774812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99818736,0.00034549844,0.00048317396,0.00005963285,0.000031919557,0.000020646055,0.00010538715,0.000068059286,0.00069837813],"genre_scores_gemma":[0.99746597,0.00025015496,0.0004346511,0.0000878392,0.000018149027,0.000038148606,0.00022985107,0.000024484687,0.0014508294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996189,0.000074990174,0.00005108329,0.000083810424,0.00007514939,0.000095978496],"domain_scores_gemma":[0.99962044,0.00010676052,0.000085741376,0.000045471417,0.000017621694,0.00012384908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021406627,0.00038149624,0.0003480152,0.00025061052,0.00014157163,0.00030517083,0.0002927827,0.000534752,0.001964695],"category_scores_gemma":[0.0002861529,0.00028873002,0.00022056619,0.000109012864,0.00034405245,0.00021509704,0.00019129847,0.0009400621,0.00075188687],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016744732,0.00006802198,0.00019135125,0.000016946515,0.0000044658364,0.00022494304,0.000010948038,0.00004114355,0.998575,0.000034627978,0.000024047275,0.0006410133],"study_design_scores_gemma":[0.00008924939,0.0021637,0.019167634,0.000015576099,0.000041511474,0.0030114148,0.0001006762,0.001665561,0.9711076,0.00013803694,0.0024863193,0.000012649301],"about_ca_topic_score_codex":0.0003322484,"about_ca_topic_score_gemma":0.00034114165,"teacher_disagreement_score":0.001964695,"about_ca_system_score_codex":0.0002052647,"about_ca_system_score_gemma":0.00012704666,"threshold_uncertainty_score":0.0065725446},"labels":[],"label_agreement":null},{"id":"W2091829446","doi":"10.3899/jrheum.090775","title":"Multiplex Screening of 22 Single-Nucleotide Polymorphisms in 7 Toll-like Receptors: An Association Study in Rheumatoid Arthritis","year":2010,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"H. Lundbeck A/S; Lundbeckfonden; Nederlandse Organisatie voor Wetenschappelijk Onderzoek","keywords":"Medicine; Rheumatoid arthritis; Single-nucleotide polymorphism; SNP; Immunology; Internal medicine; Cohort; Disease; Pathogenesis; Rheumatology; Genotype; Oncology; Genetics; Gene; Biology","score_opus":0.011902416209993856,"score_gpt":0.23673394889806215,"score_spread":0.2248315326880683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091829446","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995628,0.000117731666,0.00016172335,0.000012235999,0.0000024707272,0.000004755126,0.00007199126,0.0000031764669,0.00006320464],"genre_scores_gemma":[0.9993099,0.000047209,0.00038847604,0.000015426249,0.000008416503,0.00000770962,0.00010082064,0.0000022258764,0.00011985748],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99940836,0.00019596313,0.000056412035,0.00018412563,0.000094985604,0.0000601906],"domain_scores_gemma":[0.99884987,0.00037344312,0.0004052338,0.000086966145,0.000092311115,0.00019218036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093379186,0.0005149122,0.0003756611,0.00044079046,0.00038984016,0.0004544149,0.00027657475,0.00038640935,0.0011647319],"category_scores_gemma":[0.0019324467,0.00026627598,0.0002609434,0.0005559466,0.00018718424,0.0001648204,0.00024158451,0.00043802493,0.0002364679],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013785482,0.00013995363,0.9840783,0.000017112166,0.00015441085,0.0003053276,0.000099599056,0.00006937027,0.0101591945,0.000017459677,0.00008534341,0.0034954823],"study_design_scores_gemma":[0.00008422409,0.0009451335,0.99503326,0.000007967862,0.00015380702,0.0015413763,0.00006113897,0.00047056194,0.001490055,0.000028552142,0.00017500085,0.000008993366],"about_ca_topic_score_codex":0.00063379644,"about_ca_topic_score_gemma":0.0008271186,"teacher_disagreement_score":0.0011647319,"about_ca_system_score_codex":0.00014316986,"about_ca_system_score_gemma":0.00015165556,"threshold_uncertainty_score":0.0049384236},"labels":[],"label_agreement":null},{"id":"W2091949830","doi":"10.1016/s0091-3057(02)01024-9","title":"Sex differences in the effects of muramyl dipeptide and lipopolysaccharide on locomotor activity and the development of behavioral tolerance in rats","year":2002,"lang":"en","type":"article","venue":"Pharmacology Biochemistry and Behavior","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Muramyl dipeptide; Lipopolysaccharide; Open field; Locomotor activity; Intraperitoneal injection; Pharmacology; Medicine; Endocrinology; Internal medicine; Immunology","score_opus":0.015585486041197787,"score_gpt":0.270189662207591,"score_spread":0.2546041761663932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091949830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99865746,0.0003234727,0.00018280183,0.000103875325,0.000028259125,0.000006864826,0.00020939772,0.0000285112,0.0004594691],"genre_scores_gemma":[0.99146324,0.00072584074,0.0004392868,0.00018070018,0.000030419234,0.000056663113,0.0005012843,0.000048546655,0.006554071],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969804,0.000042964988,0.000019965604,0.0000690417,0.00005494614,0.00011501997],"domain_scores_gemma":[0.9988697,0.00010941221,0.00033702044,0.00011070278,0.00008007716,0.00049315597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024082212,0.0007226239,0.00057424075,0.0009408332,0.0003419355,0.00041244057,0.0003793247,0.0005538136,0.002924736],"category_scores_gemma":[0.00043892482,0.00058089726,0.0004064014,0.00029098862,0.000915377,0.00043621397,0.0003873404,0.0014084486,0.0003818814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01525496,0.0014871177,0.0058065364,0.00006383311,0.00006741497,0.00038290373,0.00024642443,0.00013351665,0.96845657,0.00048515428,0.00020823217,0.007407388],"study_design_scores_gemma":[0.0006983344,0.013477878,0.24983558,0.000054426626,0.0002475343,0.0008417177,0.0007990219,0.0015519904,0.7290692,0.0012267324,0.002040563,0.00015705355],"about_ca_topic_score_codex":0.0015544046,"about_ca_topic_score_gemma":0.0029846814,"teacher_disagreement_score":0.002924736,"about_ca_system_score_codex":0.0005791415,"about_ca_system_score_gemma":0.0005620246,"threshold_uncertainty_score":0.009784222},"labels":[],"label_agreement":null},{"id":"W2092069761","doi":"10.1046/j.1365-3083.2000.00684.x","title":"Protective DNA Immunization against <i>Chlamydia pneumoniae</i>","year":2000,"lang":"en","type":"article","venue":"Scandinavian Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Karolinska Institutet; Universität Zürich; University of Toronto","keywords":"DNA vaccination; CD8; Chlamydophila pneumoniae; Biology; Spleen; Antibody; Immunization; Vaccination; Immunology; Immune system; Virology; Chlamydiaceae; Microbiology","score_opus":0.004751553528394886,"score_gpt":0.20396653368088424,"score_spread":0.19921498015248937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092069761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99476874,0.0011742547,0.0017764186,0.00017452205,0.00008844516,0.00009122643,0.0005520837,0.00014975543,0.0012244576],"genre_scores_gemma":[0.99339527,0.0009154915,0.0026079193,0.00017661182,0.00004065393,0.0000688706,0.0009979059,0.000033570006,0.0017637399],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975175,0.000030395617,0.000016926246,0.000059612154,0.0000474216,0.00009391035],"domain_scores_gemma":[0.99980015,0.00004199433,0.0000635708,0.00002410752,0.000025879779,0.00004442869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020718755,0.0008291241,0.00041224953,0.00024688966,0.00011605615,0.00026203663,0.00025777036,0.0006172639,0.001247005],"category_scores_gemma":[0.00017046659,0.00017587162,0.00038547814,0.00010908211,0.0002866922,0.0002422273,0.00016809757,0.0010226322,0.00037461257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002167515,0.0001503738,0.0001449724,0.00007238474,0.000008325455,0.0000240078,0.000010154497,0.00006527329,0.9978271,0.000048248166,0.000042753738,0.0013895923],"study_design_scores_gemma":[0.000093602306,0.005504574,0.0027121427,0.000022921238,0.0000512622,0.00030830593,0.000017060866,0.0004912288,0.98924774,0.00004043299,0.0015054526,0.000005272845],"about_ca_topic_score_codex":0.00050056627,"about_ca_topic_score_gemma":0.00049425167,"teacher_disagreement_score":0.001247005,"about_ca_system_score_codex":0.00034614932,"about_ca_system_score_gemma":0.00022683131,"threshold_uncertainty_score":0.0041716695},"labels":[],"label_agreement":null},{"id":"W2092401848","doi":"10.1016/j.cellimm.2007.02.010","title":"Penta-acylated lipopolisaccharide binds to murine MD-2 but does not induce the oligomerization of TLR4 required for signal transduction","year":2006,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Ministry of Education, Culture, Sports, Science and Technology","keywords":"Mutant; Biology; Signal transduction; Transfection; TLR4; Lipopolysaccharide; Cell biology; Recombinant DNA; Lipid A; Escherichia coli; Molecular biology; Transduction (biophysics); Biochemistry; Gene; Immunology","score_opus":0.012009155736999602,"score_gpt":0.22301331409863476,"score_spread":0.21100415836163516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092401848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99690706,0.0005350058,0.0010672844,0.000080490274,0.000040014536,0.000025878011,0.00030733817,0.000026778518,0.0010101338],"genre_scores_gemma":[0.99326575,0.00037956628,0.001216447,0.00011426922,0.000018207387,0.00004017609,0.0024595612,0.0000321318,0.002473911],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967134,0.00006445682,0.00002878564,0.000042647793,0.000079547266,0.00011314909],"domain_scores_gemma":[0.9996511,0.0000856733,0.00007151783,0.000076428376,0.000026364973,0.000088971436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023136743,0.00065555354,0.0004254806,0.0003088323,0.00024779665,0.0005955356,0.0003249296,0.00058153906,0.0016710343],"category_scores_gemma":[0.00026184184,0.00038242203,0.00058801216,0.0002467574,0.0003093961,0.0003700896,0.00037571284,0.0011913696,0.0009376849],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018508585,0.00003238844,0.0000998669,0.000012048068,0.0000058208443,0.000036029654,0.0000046338123,0.00003775875,0.9993618,0.000046735346,0.000015273004,0.00016258906],"study_design_scores_gemma":[0.000030568655,0.00024731335,0.004912531,0.000005251035,0.000013480084,0.0002276609,0.000024987674,0.0005818777,0.99310416,0.00005402575,0.0007915186,0.0000066768366],"about_ca_topic_score_codex":0.001031542,"about_ca_topic_score_gemma":0.0010575227,"teacher_disagreement_score":0.0016710343,"about_ca_system_score_codex":0.00067615794,"about_ca_system_score_gemma":0.0004239108,"threshold_uncertainty_score":0.0055902004},"labels":[],"label_agreement":null},{"id":"W2092786350","doi":"10.1159/000323880","title":"A Nonsynonymous Polymorphism of IRAK4 Associated with Increased Prevalence of Gram-Positive Infection and Decreased Response to Toll-Like Receptor Ligands","year":2011,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"National Institutes of Health; Amgen","keywords":"Biology; Single-nucleotide polymorphism; Haplotype; Immunology; Allele; Systemic inflammatory response syndrome; Sepsis; Genetics; Gene; Genotype","score_opus":0.011832233312374455,"score_gpt":0.2202942616806106,"score_spread":0.20846202836823613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092786350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937433,0.00005963274,0.00031100278,0.000023941693,0.000007858835,0.0000046585633,0.00007423022,0.0000053813533,0.0001388685],"genre_scores_gemma":[0.9994286,0.000022693386,0.00023012658,0.00002194766,0.000014433463,0.0000041304875,0.00009424104,0.000004531778,0.00017932824],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996604,0.00010732768,0.000041287767,0.00010249155,0.00004655426,0.000041960517],"domain_scores_gemma":[0.99921715,0.00020467221,0.00029794686,0.000051830782,0.00004867037,0.00017970389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027893076,0.0005386778,0.00029651067,0.00044537312,0.0003584269,0.00024903135,0.00024430477,0.0005036768,0.002929533],"category_scores_gemma":[0.00082905934,0.00022377924,0.00039580322,0.0003996485,0.0002983857,0.00011974876,0.00028022382,0.0005775242,0.00023935983],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002540786,0.0001628447,0.88063973,0.00005116387,0.00035952183,0.0035651845,0.00023398791,0.00025474885,0.10847398,0.00016306274,0.00025207357,0.003302953],"study_design_scores_gemma":[0.000079653735,0.000567603,0.9896568,0.000010588964,0.00014449835,0.0060448316,0.0001278173,0.00076670334,0.0021707572,0.00011538413,0.00030279593,0.00001255102],"about_ca_topic_score_codex":0.001101696,"about_ca_topic_score_gemma":0.0008548651,"teacher_disagreement_score":0.002929533,"about_ca_system_score_codex":0.000097686236,"about_ca_system_score_gemma":0.0001408761,"threshold_uncertainty_score":0.009800255},"labels":[],"label_agreement":null},{"id":"W2092854606","doi":"10.1111/j.1439-0531.2008.01318.x","title":"Post-natal Changes in Testicular Concentrations of Interleukin-1 Alpha and Beta and Interleukin-6 during Sexual Maturation in Bulls","year":2009,"lang":"en","type":"article","venue":"Reproduction in Domestic Animals","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Sexual maturity; Internal medicine; Endocrinology; Interleukin 1β; Interleukin; Alpha (finance); Age groups; Testicle; BETA (programming language); Medicine; Biology; Andrology; Cytokine; Surgery","score_opus":0.007558741555225445,"score_gpt":0.2459559466191749,"score_spread":0.23839720506394943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092854606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984503,0.0008166169,0.00014145195,0.000012352509,0.0000052446767,0.0000043193736,0.00015090026,0.0000044419276,0.00041448453],"genre_scores_gemma":[0.9977576,0.0004858419,0.00013789763,0.00003368518,0.0000074466734,0.000013139579,0.00035697618,0.0000044562316,0.0012028293],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990034,0.000017622593,0.00000599387,0.000027103317,0.000024997049,0.000023934703],"domain_scores_gemma":[0.9996668,0.000052591386,0.0001239548,0.000016469892,0.000057917987,0.00008222641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015676292,0.000119689845,0.00019206114,0.0003765399,0.00014710738,0.00033599912,0.000099071636,0.0001552871,0.0012663202],"category_scores_gemma":[0.00034528677,0.00015075243,0.000110855406,0.00016680699,0.00027092593,0.00018586672,0.00009037151,0.00041953652,0.00026267947],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017693206,0.0001681297,0.2115545,0.00011000303,0.000059330927,0.00067889766,0.0007932911,0.00008832562,0.7747724,0.00011616343,0.00015272204,0.009736926],"study_design_scores_gemma":[0.000007928597,0.0008285123,0.97411376,0.000009506144,0.00002894032,0.00039783856,0.0004680012,0.000063319894,0.023353785,0.0000240601,0.00069840124,0.000006014583],"about_ca_topic_score_codex":0.0018408904,"about_ca_topic_score_gemma":0.0024821714,"teacher_disagreement_score":0.0018408904,"about_ca_system_score_codex":0.00018766978,"about_ca_system_score_gemma":0.00011802708,"threshold_uncertainty_score":0.004236281},"labels":[],"label_agreement":null},{"id":"W2092861122","doi":"10.1006/clim.2001.5131","title":"Recovery from Mouse Hepatitis Virus Infection Depends on Recruitment of CD8+ Cells Rather Than Activation of Intrahepatic CD4+αβ−TCRinter or NK-T Cells","year":2001,"lang":"en","type":"article","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mouse hepatitis virus; CD8; Immunology; Chemistry; Virology; Immune system; Biology; Medicine; Pathology; Disease; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty)","score_opus":0.05982355052287723,"score_gpt":0.3231139639359794,"score_spread":0.26329041341310216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092861122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99167514,0.0012568003,0.0024628039,0.00015872042,0.00010424329,0.00011083504,0.00040540035,0.0003626924,0.0034632783],"genre_scores_gemma":[0.9914784,0.000515729,0.0016975302,0.00013359278,0.00005735084,0.00014501788,0.0007163983,0.00008485861,0.0051710703],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962914,0.000060433016,0.000031647232,0.000051561514,0.000058787125,0.00016836202],"domain_scores_gemma":[0.9995685,0.00006320265,0.00007158323,0.0001398917,0.000031715346,0.00012509161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029728995,0.0007945206,0.00059187814,0.00034688102,0.00022123005,0.0005036905,0.0002466297,0.00043980856,0.0025345362],"category_scores_gemma":[0.00038162465,0.00028416308,0.00045349597,0.00008814097,0.0003355892,0.00042225604,0.0004025186,0.0018081066,0.0013474128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009683118,0.00015484384,0.0006223287,0.000048476042,0.0000070661526,0.000071324044,0.000024266597,0.000051007908,0.99436814,0.00011139929,0.00009385307,0.0034788153],"study_design_scores_gemma":[0.00018920377,0.0021236977,0.019108394,0.000041664858,0.000031610347,0.00048423826,0.000092150505,0.0009730486,0.97448957,0.00021232295,0.002240755,0.000013329799],"about_ca_topic_score_codex":0.00022842738,"about_ca_topic_score_gemma":0.00035176895,"teacher_disagreement_score":0.0025345362,"about_ca_system_score_codex":0.00020605672,"about_ca_system_score_gemma":0.0002516931,"threshold_uncertainty_score":0.00847888},"labels":[],"label_agreement":null},{"id":"W2092972513","doi":"10.1111/j.1600-065x.2009.00765.x","title":"Immune regulation by 4‐1BB and 4‐1BBL: complexities and challenges","year":2009,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":301,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Immune system; Biology; Immune receptor; Immunology; CD8; Receptor; T cell; Immunotherapy; Genetics","score_opus":0.1267117739713093,"score_gpt":0.32451600313484363,"score_spread":0.19780422916353432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2092972513","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021057532,0.9978981,0.00023836881,0.00064747024,0.000380722,0.0000015314903,0.00000423295,0.000005169317,0.00061384495],"genre_scores_gemma":[0.0012058937,0.99643445,0.000343459,0.00042162338,0.00046968428,0.000005639195,0.000012178107,0.0000019933007,0.0011051707],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981433,0.000041364605,0.00002284355,0.000030342344,0.000070269874,0.000020828846],"domain_scores_gemma":[0.9997857,0.00007351091,0.000024464092,0.000007847717,0.000079550606,0.000029028097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008296252,0.0007464678,0.0013404002,0.00088059914,0.00029712106,0.0009176989,0.00084034266,0.0012848403,0.0016053542],"category_scores_gemma":[0.00048684346,0.00023724386,0.00026100563,0.0010643861,0.0007131318,0.0019027429,0.0005902903,0.0019484394,0.0017237713],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013087348,0.00006714942,0.00020523164,0.0075312993,0.000046187404,0.00038571132,0.00013796588,0.00071613485,0.013871586,0.014046059,0.029638525,0.9332232],"study_design_scores_gemma":[0.000018620414,0.00008950048,0.0006866469,0.0013630544,0.000030871983,0.001389927,0.0001600427,0.0001699853,0.0017188155,0.006848811,0.9875004,0.000023242135],"about_ca_topic_score_codex":0.0008314466,"about_ca_topic_score_gemma":0.0014043507,"teacher_disagreement_score":0.0016053542,"about_ca_system_score_codex":0.00090128824,"about_ca_system_score_gemma":0.0011156114,"threshold_uncertainty_score":0.006539285},"labels":[],"label_agreement":null},{"id":"W2093883160","doi":"10.1177/1753425910392934","title":"Expression of integrins and Toll-like receptors in cervical cancer: Effect of infectious agents","year":2011,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thunder Bay Regional Research Institute; NOSM University; Thunder Bay Regional Health Sciences Centre; Lakehead University","funders":"","keywords":"Integrin; Biology; TLR2; HeLa; Carcinogenesis; Cervical cancer; Innate immune system; Immune system; Immunology; HPV infection; Receptor; Cancer research; Microbiology; Cancer; Cell","score_opus":0.01493005321460483,"score_gpt":0.2576588847360078,"score_spread":0.24272883152140295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093883160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836016,0.013952692,0.00043289489,0.00019706963,0.000017808825,0.000022679753,0.00010529101,0.000011257386,0.0016586243],"genre_scores_gemma":[0.99453086,0.0036628162,0.0006575142,0.0000524754,0.000013065373,0.000034972025,0.00011013858,0.000002917532,0.0009352869],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99973196,0.00011538611,0.00001914817,0.000026184653,0.000039481016,0.000067822875],"domain_scores_gemma":[0.99988496,0.000038148934,0.000022787262,0.000016238486,0.000017289241,0.000020597101],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002967253,0.00022865488,0.00022739693,0.0002768322,0.0001808997,0.00031825705,0.0001554047,0.00048133323,0.00090746064],"category_scores_gemma":[0.00031164184,0.00018459192,0.00024967061,0.00022867495,0.00027147718,0.00027798617,0.0001453813,0.00029300526,0.0002490731],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007680403,0.00007008907,0.003535429,0.00015090704,0.000012746517,0.00020363022,0.00004616216,0.00007267295,0.9911094,0.000075118405,0.00004580306,0.0039099576],"study_design_scores_gemma":[0.00008677946,0.0024923803,0.13511637,0.00006296264,0.00011753236,0.0018724586,0.0003123457,0.0010516264,0.85357124,0.00021346819,0.005081758,0.000021119207],"about_ca_topic_score_codex":0.00059460633,"about_ca_topic_score_gemma":0.0007255414,"teacher_disagreement_score":0.00090746064,"about_ca_system_score_codex":0.00028913302,"about_ca_system_score_gemma":0.00012778769,"threshold_uncertainty_score":0.0030357242},"labels":[],"label_agreement":null},{"id":"W2094043027","doi":"10.1002/1097-0185(20010201)262:2<186::aid-ar1024>3.0.co;2-b","title":"Effects of intradermally administered plasmid deoxyribonucleic acid on ovine popliteal lymph node morphology","year":2001,"lang":"en","type":"article","venue":"The Anatomical Record","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Lymph; Lymph node; Medullary cavity; Plasmid; Medulla; Anatomy; Cortex (anatomy); Pathology; Germinal center; Biology; Molecular biology; Medicine; Chemistry; DNA; Immunology; Antibody","score_opus":0.008674121227968817,"score_gpt":0.23233109601648191,"score_spread":0.2236569747885131,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094043027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969927,0.0010729745,0.00084945676,0.00004397106,0.000021663873,0.000026681422,0.00014096043,0.000051394978,0.00080024503],"genre_scores_gemma":[0.9960155,0.00079549523,0.0010346738,0.00004831634,0.000012242898,0.000043264747,0.00023389659,0.000015091571,0.0018015283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985564,0.0000358195,0.0000075966645,0.00004026546,0.000027423774,0.000033267304],"domain_scores_gemma":[0.9997801,0.00007933174,0.00006852285,0.000020052581,0.000016532567,0.000035448636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001434351,0.00018580223,0.00016732344,0.0002251837,0.0000788578,0.00032055093,0.00013959254,0.00026160054,0.00093675393],"category_scores_gemma":[0.00027724772,0.00011159231,0.00015378644,0.000092439026,0.0003938877,0.00022857424,0.00014388387,0.00050488784,0.00020115217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008807627,0.00009693117,0.0004841297,0.00006681471,0.000004487231,0.00012389306,0.00006587583,0.00009510913,0.99566936,0.000033493918,0.000029364357,0.0024497467],"study_design_scores_gemma":[0.00008225526,0.014830778,0.028738912,0.000028226026,0.000043023418,0.0004459809,0.0002773252,0.00087068527,0.95232975,0.00007132496,0.0022665958,0.000015086029],"about_ca_topic_score_codex":0.0005208913,"about_ca_topic_score_gemma":0.00093339465,"teacher_disagreement_score":0.00093675393,"about_ca_system_score_codex":0.00021472655,"about_ca_system_score_gemma":0.00014331152,"threshold_uncertainty_score":0.0031337142},"labels":[],"label_agreement":null},{"id":"W2094785827","doi":"10.1016/j.jim.2012.05.008","title":"Optimization and application of a flow cytometric PU.1 assay for murine immune cells","year":2012,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Molecular biology; Flow cytometry; Paraformaldehyde; Antibody; Haematopoiesis; Biology; Immune system; Bone marrow; Myeloid; Antigen; Chemistry; Spleen; Immunology; Cell biology; Stem cell","score_opus":0.02040784501404489,"score_gpt":0.3303461088522085,"score_spread":0.3099382638381636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094785827","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28440708,0.001498004,0.7055583,0.0003965825,0.00019228764,0.0016791855,0.0014306356,0.0023312394,0.0025066652],"genre_scores_gemma":[0.3567822,0.0009033076,0.631465,0.00025926973,0.00008021063,0.0031697818,0.002856702,0.00038634357,0.0040971935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973726,0.0007087125,0.00021353854,0.00051520165,0.00095831207,0.00023159942],"domain_scores_gemma":[0.9988599,0.00048554697,0.00012675549,0.00020391199,0.00025130567,0.00007245296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027123594,0.0013923959,0.00093120866,0.0016979706,0.0006157908,0.0011720245,0.0012290066,0.0010044255,0.0018136089],"category_scores_gemma":[0.0018424252,0.0006841932,0.00076479546,0.00084855367,0.00059676234,0.00054010557,0.00060694077,0.0017464702,0.0013465489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008695029,0.00010436205,0.0003772053,0.000046771667,0.0000075943144,0.000007603807,0.000018866505,0.0002910686,0.9923921,0.0001767216,0.000093637274,0.006397186],"study_design_scores_gemma":[0.000012177507,0.00018723302,0.001368074,0.0000060912894,0.000022332215,0.000041214447,0.00000744257,0.0029434506,0.99353796,0.000106257736,0.0017590828,0.000008582095],"about_ca_topic_score_codex":0.00054166093,"about_ca_topic_score_gemma":0.0013471268,"teacher_disagreement_score":0.0027123594,"about_ca_system_score_codex":0.0007367069,"about_ca_system_score_gemma":0.0008628482,"threshold_uncertainty_score":0.014344454},"labels":[],"label_agreement":null},{"id":"W2094891970","doi":"10.1099/vir.0.052811-0","title":"Polymorphism in the promoter region of the Toll-like receptor 9 gene and cervical human papillomavirus infection","year":2013,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McGill University","funders":"National Cancer Institute; Canadian Institutes of Health Research; McGill University; Fundação de Amparo à Pesquisa do Estado de São Paulo; Universidade do Minho; Ludwig Institute for Cancer Research","keywords":"Biology; Genotype; Genotyping; HPV infection; TLR9; Single-nucleotide polymorphism; Allele; Virology; Cohort; Gene; SNP; Cervical cancer; Immunology; Genetics; Internal medicine; Medicine; Gene expression; Cancer","score_opus":0.011256381782768585,"score_gpt":0.22517767657166463,"score_spread":0.21392129478889604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094891970","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991443,0.00031802282,0.000107837455,0.00002695016,0.000006083065,0.0000081606695,0.00016745686,0.0000031836905,0.00021798207],"genre_scores_gemma":[0.9994332,0.000087778244,0.00009121697,0.000015754562,0.000007724606,0.000008890341,0.0001266635,0.0000017241057,0.00022698048],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997296,0.000080998085,0.0000213658,0.00007478257,0.000043940105,0.00004931051],"domain_scores_gemma":[0.9992207,0.00028507577,0.0002146155,0.00007063385,0.000058320657,0.00015050199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039354165,0.00023498073,0.0003119846,0.00043701354,0.00023884028,0.00027712193,0.0003135713,0.00046784466,0.0024477865],"category_scores_gemma":[0.0020027652,0.00024072664,0.00024399284,0.0005618446,0.00023621036,0.00014797358,0.00017375988,0.00036662398,0.0002325981],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010344464,0.00006904914,0.99321896,0.00002333165,0.00007938342,0.0002369974,0.000068172565,0.000036141526,0.0033302896,0.00002626079,0.00010282495,0.0017742016],"study_design_scores_gemma":[0.000029227125,0.00016781158,0.9983718,0.0000067898904,0.00005397776,0.00055381894,0.000047459765,0.00018050129,0.00035540573,0.000043080687,0.0001868663,0.0000033669664],"about_ca_topic_score_codex":0.0030770865,"about_ca_topic_score_gemma":0.0021216504,"teacher_disagreement_score":0.0030770865,"about_ca_system_score_codex":0.00019176472,"about_ca_system_score_gemma":0.00022523996,"threshold_uncertainty_score":0.008188665},"labels":[],"label_agreement":null},{"id":"W2094908344","doi":"10.1038/sj.cdd.4400671","title":"Increased expression of the potential proapoptotic molecule DD2 and increased synthesis of leukotriene B4 during allograft rejection in a marine sponge","year":2000,"lang":"en","type":"article","venue":"Cell Death and Differentiation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Deutsche Forschungsgemeinschaft; McGill University","keywords":"Death domain; Apoptosis; Sponge; Transplantation; Necroptosis; Biology; Programmed cell death; Tumor necrosis factor alpha; Complementary DNA; Molecular biology; Necrosis; Receptor; Cell biology; Gene; Immunology; Biochemistry; Medicine; Genetics; Internal medicine","score_opus":0.0035137119875428445,"score_gpt":0.17457992102211678,"score_spread":0.17106620903457392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094908344","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991786,0.00013288163,0.00016034667,0.000018810028,0.0000059641166,0.0000024877102,0.000064935855,0.000009620939,0.00042643014],"genre_scores_gemma":[0.9979213,0.0001045216,0.00014773375,0.000015327278,0.0000059250256,0.000009736201,0.00013174719,0.0000075904763,0.0016562311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989855,0.000013380723,0.000009749502,0.000016701311,0.000026142081,0.000035524452],"domain_scores_gemma":[0.999713,0.000042418076,0.00007730636,0.000040905143,0.000027818425,0.00009851631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121740806,0.00019282466,0.0002903482,0.00038223635,0.00027010214,0.0003595107,0.00018298566,0.00030775275,0.0019404505],"category_scores_gemma":[0.00027412933,0.00024152116,0.00024262023,0.00018526743,0.00043813034,0.00023816651,0.00030734693,0.00051532534,0.0003756398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054522196,0.000010180749,0.002002643,0.000022278256,0.0000044181234,0.00045190248,0.00006458045,0.000020996174,0.9963897,0.000045349967,0.000013418445,0.0004293147],"study_design_scores_gemma":[0.00009885714,0.0017982401,0.3300622,0.000014777784,0.00008168329,0.0057672984,0.0014615846,0.0008140834,0.65707904,0.00025621618,0.002533567,0.000032410284],"about_ca_topic_score_codex":0.0011701559,"about_ca_topic_score_gemma":0.0010474669,"teacher_disagreement_score":0.0019404505,"about_ca_system_score_codex":0.00037772974,"about_ca_system_score_gemma":0.00019473236,"threshold_uncertainty_score":0.0064914823},"labels":[],"label_agreement":null},{"id":"W2094918348","doi":"10.1073/pnas.2230460100","title":"Critical roles for IFN-β in lymphoid development, myelopoiesis, and tumor development: Links to tumor necrosis factor α","year":2003,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs","keywords":"Myelopoiesis; Biology; Spleen; CD8; Tumor necrosis factor alpha; Lewis lung carcinoma; Immunology; Haematopoiesis; Bone marrow; Immune system; Stem cell; Cancer; Cell biology","score_opus":0.02940428361803975,"score_gpt":0.29382655665838936,"score_spread":0.2644222730403496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094918348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876429,0.005890916,0.004026956,0.00020012024,0.000021798083,0.000012453608,0.00019131241,0.00004826652,0.0019653123],"genre_scores_gemma":[0.9924461,0.0030517215,0.0022483815,0.000063975516,0.000014015585,0.000022420583,0.00025160887,0.0000150782425,0.0018867516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993837,0.000011654755,0.000007603099,0.000014437962,0.000014229881,0.00001372797],"domain_scores_gemma":[0.99982363,0.00001588457,0.00007577967,0.000018054452,0.000015717667,0.000050982093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015210088,0.00042093458,0.000118830576,0.0002447839,0.0001263444,0.00036407082,0.00016797757,0.0001833713,0.00074372697],"category_scores_gemma":[0.00012310511,0.00009073091,0.000124979,0.00008703465,0.00030854304,0.00022567503,0.00022864397,0.0004623801,0.00018500793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000312305,0.00002179599,0.0023434362,0.000035901667,0.000004273705,0.00015249822,0.000026993988,0.00007604749,0.99381196,0.0006212977,0.000013699497,0.0025797558],"study_design_scores_gemma":[0.0000436931,0.0003221735,0.017989358,0.00004693745,0.00003318535,0.0009765878,0.00007530119,0.00070486363,0.9749181,0.00070699037,0.0041773417,0.0000053718754],"about_ca_topic_score_codex":0.00024822087,"about_ca_topic_score_gemma":0.0002704539,"teacher_disagreement_score":0.00074372697,"about_ca_system_score_codex":0.0002618673,"about_ca_system_score_gemma":0.00016488391,"threshold_uncertainty_score":0.0024879575},"labels":[],"label_agreement":null},{"id":"W2095072263","doi":"10.1097/01.ccm.0000256723.37586.a2","title":"Toll-like receptor 2 activation by bacterial peptidoglycan–associated lipoprotein activates cardiomyocyte inflammation and contractile dysfunction","year":2007,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Jubilee Hospital","funders":"National Heart, Lung, and Blood Institute; U.S. Public Health Service; Amgen","keywords":"Peptidoglycan; Medicine; Inflammation; Toll-like receptor; Receptor; Cell biology; Immunology; Internal medicine; Innate immune system; Biochemistry; Gene; Biology","score_opus":0.007636607219905471,"score_gpt":0.24900562957097352,"score_spread":0.24136902235106805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095072263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972976,0.001306122,0.0007655347,0.000079688354,0.000026071244,0.000048297075,0.000099648925,0.000019246108,0.00035788133],"genre_scores_gemma":[0.9959378,0.001657449,0.001155271,0.00014562749,0.000044482418,0.0001249393,0.00019990162,0.000006972875,0.00072754256],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970764,0.00010919698,0.000025162224,0.00003788423,0.000054643577,0.00006544054],"domain_scores_gemma":[0.9997638,0.000029470435,0.00010786727,0.000017312435,0.0000142132385,0.00006733836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005381377,0.0006160549,0.00042101607,0.00016566494,0.0001140483,0.000261734,0.00013543772,0.00027649142,0.0014117546],"category_scores_gemma":[0.00021893192,0.00016961069,0.00027518597,0.00010760908,0.0002725615,0.00015921601,0.00021478142,0.0005124547,0.00030480066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047681024,0.0003986087,0.0035960525,0.00019224112,0.00003212037,0.00027525428,0.000016875088,0.00009153306,0.98640776,0.000045983114,0.000087628876,0.0040878104],"study_design_scores_gemma":[0.0017393221,0.039637335,0.13487169,0.00014284096,0.00023039439,0.0036558635,0.00023411476,0.0025757698,0.8139238,0.00019865215,0.002762341,0.00002787489],"about_ca_topic_score_codex":0.0000669478,"about_ca_topic_score_gemma":0.00016940979,"teacher_disagreement_score":0.0014117546,"about_ca_system_score_codex":0.00019911969,"about_ca_system_score_gemma":0.00023167959,"threshold_uncertainty_score":0.0047228336},"labels":[],"label_agreement":null},{"id":"W2095222532","doi":"10.1097/ccm.0b013e3181659333","title":"Differential gene profiling in acute lung injury identifies injury-specific gene expression*","year":2008,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; St. Michael's Hospital","funders":"","keywords":"Medicine; Gene expression profiling; Gene; Gene expression; Lung; Pathology; Internal medicine; Genetics; Biology","score_opus":0.016487713502171035,"score_gpt":0.29413475074344947,"score_spread":0.2776470372412784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095222532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9730636,0.0032095555,0.019302765,0.00015226331,0.000045210152,0.00009883491,0.00261086,0.00015499392,0.0013619513],"genre_scores_gemma":[0.9566194,0.003414161,0.031759474,0.00026175258,0.000059152946,0.0004366364,0.004855714,0.00004958584,0.002544103],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996117,0.00006059886,0.000021928709,0.000115338014,0.00011859964,0.000071898656],"domain_scores_gemma":[0.9998084,0.00006134291,0.00004997689,0.000016551336,0.000040103525,0.000023794068],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027216942,0.0002903831,0.00040120442,0.00076106866,0.00019391006,0.00033101093,0.00020616992,0.00028702398,0.0013520502],"category_scores_gemma":[0.00033810805,0.00011040833,0.00027292923,0.0011264441,0.00032698523,0.00023808204,0.00021442886,0.00038746098,0.0004038635],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026534765,0.000046546145,0.005630803,0.0001713666,0.00001755408,0.000051636496,0.00003814131,0.00012479557,0.98455924,0.000094934294,0.00007733923,0.008922327],"study_design_scores_gemma":[0.000032632142,0.0015166944,0.32712638,0.00006875782,0.00015460672,0.0008427908,0.0002215108,0.004677661,0.6575551,0.0009664792,0.006805133,0.000032322234],"about_ca_topic_score_codex":0.00020144622,"about_ca_topic_score_gemma":0.00040098402,"teacher_disagreement_score":0.0013520502,"about_ca_system_score_codex":0.00018709803,"about_ca_system_score_gemma":0.00021251987,"threshold_uncertainty_score":0.004523039},"labels":[],"label_agreement":null},{"id":"W2095274041","doi":"10.1002/eji.200939929","title":"Divergent roles of Toll‐like receptor 2 in response to lipoteichoic acid and <i>Staphylococcus aureus in vivo</i>","year":2010,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Lipoteichoic acid; TLR2; Biology; Proinflammatory cytokine; Staphylococcus aureus; Immunology; Immune system; Microbiology; Neutrophilia; Innate immune system; Inflammation; Bacteria","score_opus":0.005260969175494623,"score_gpt":0.20903868954784294,"score_spread":0.20377772037234831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095274041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945042,0.001675949,0.0022070936,0.00010923708,0.00002968184,0.00003246175,0.00019715609,0.000045515822,0.0011986918],"genre_scores_gemma":[0.99257785,0.0011548029,0.0028091604,0.00028035187,0.000031138086,0.00010840694,0.0005042749,0.000029183539,0.0025047672],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995552,0.00010083154,0.000045598634,0.00008553594,0.000092916234,0.00011983363],"domain_scores_gemma":[0.9997547,0.000026514666,0.00007339739,0.000027054388,0.000024841635,0.000093501425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035504103,0.0007070387,0.0004036891,0.00029247664,0.00014600257,0.0006500487,0.0002376772,0.0005561175,0.0009299501],"category_scores_gemma":[0.00022552426,0.00038362955,0.00048213228,0.000108856846,0.00036980023,0.00036089012,0.00033724512,0.0010807234,0.000549531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029428874,0.000017773524,0.00020832723,0.000019412038,0.0000028764566,0.00004221524,0.00001297527,0.000028400631,0.99885714,0.00006280072,0.000011555872,0.00044222252],"study_design_scores_gemma":[0.00009644068,0.0019257306,0.028084772,0.000029895966,0.000068346264,0.0015809725,0.00020392868,0.0016792155,0.9641992,0.00026204673,0.001847537,0.000021821541],"about_ca_topic_score_codex":0.00018313873,"about_ca_topic_score_gemma":0.00020244498,"teacher_disagreement_score":0.0009299501,"about_ca_system_score_codex":0.00032427104,"about_ca_system_score_gemma":0.00024205577,"threshold_uncertainty_score":0.0031110048},"labels":[],"label_agreement":null},{"id":"W2095279860","doi":"10.1159/000083406","title":"Does Rigid Bronchoscopy Induce Bacterial Translocation?","year":2005,"lang":"en","type":"article","venue":"Respiration","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Bronchoscopy; Chromosomal translocation; Rigid bronchoscopy; Bacterial translocation; Surgery; Genetics","score_opus":0.009880301794434696,"score_gpt":0.2477375974642356,"score_spread":0.2378572956698009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095279860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99022573,0.00543577,0.002366285,0.0004143088,0.00008739343,0.00014032876,0.00006613438,0.00004300636,0.0012210755],"genre_scores_gemma":[0.9964748,0.0020960367,0.0006659891,0.00018725981,0.00007399523,0.00004010337,0.00010471606,0.000004832191,0.00035220862],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99927,0.0002427919,0.00006402955,0.00008465227,0.00016701124,0.00017141456],"domain_scores_gemma":[0.99827623,0.00045912375,0.0008226547,0.00015669018,0.00009394908,0.00019133395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007817336,0.00058705686,0.0006223945,0.0002802655,0.00021675641,0.00034823324,0.00022665209,0.001046009,0.0027299877],"category_scores_gemma":[0.0016325557,0.00019802214,0.00045545478,0.00016779556,0.0007943613,0.00036667974,0.00038451343,0.0006541371,0.00057254685],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0070750914,0.0006507569,0.034236927,0.00089011603,0.00010776214,0.0031104954,0.00014943696,0.00016833677,0.9281055,0.00020967319,0.0003208506,0.024975104],"study_design_scores_gemma":[0.00044214787,0.05372294,0.35415754,0.00039447952,0.0004596863,0.021635195,0.0010244718,0.0022709966,0.55839753,0.000767485,0.006670242,0.000057247795],"about_ca_topic_score_codex":0.00027245836,"about_ca_topic_score_gemma":0.00030978568,"teacher_disagreement_score":0.0027299877,"about_ca_system_score_codex":0.00029617982,"about_ca_system_score_gemma":0.00020757054,"threshold_uncertainty_score":0.009132683},"labels":[],"label_agreement":null},{"id":"W2095369514","doi":"10.1016/j.molimm.2014.09.004","title":"Evidence for a common mucosal immune system in the pig","year":2014,"lang":"en","type":"review","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"High Energy Physics Group, University of Mississippi; Alberta Livestock and Meat Agency; Ministry of Agriculture - Saskatchewan; University of Saskatchewan","keywords":"Immune system; Mucosal immunity; Immunology; Mucous membrane; Immunity; Antigen; Mucosal immunology; Immunization; Biology; Medicine","score_opus":0.04762642949775957,"score_gpt":0.3311773704111829,"score_spread":0.2835509409134233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095369514","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014368402,0.99862564,0.00015228323,0.00030911804,0.00024583653,0.0000021582448,0.000012850852,0.000003868651,0.0005045561],"genre_scores_gemma":[0.000812401,0.99807286,0.0001774001,0.0002964095,0.0002937107,0.0000027449523,0.000025313782,9.55774e-7,0.00031825915],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997899,0.000032183194,0.000031000764,0.00005803515,0.0000673912,0.000021570808],"domain_scores_gemma":[0.9995801,0.0002006767,0.0000709237,0.0000142084045,0.000086936496,0.00004718215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009982155,0.0009032372,0.0016880857,0.001788764,0.00020502019,0.0012841534,0.00090954814,0.0016646541,0.0019402651],"category_scores_gemma":[0.0007129948,0.00028765269,0.00041468674,0.0015455231,0.00090925046,0.0014149568,0.00092830573,0.0018691472,0.0010234441],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015300757,0.000050553495,0.00036031322,0.017748741,0.00008940612,0.00047003024,0.000047302445,0.00030620358,0.00559493,0.0033732157,0.017838296,0.9539679],"study_design_scores_gemma":[0.00003705849,0.0002145897,0.0028233982,0.005866151,0.00022217055,0.0029387814,0.00012694536,0.00013366532,0.0012147089,0.0034451084,0.98294234,0.000035106357],"about_ca_topic_score_codex":0.0009731932,"about_ca_topic_score_gemma":0.0014255499,"teacher_disagreement_score":0.0019402651,"about_ca_system_score_codex":0.00061860314,"about_ca_system_score_gemma":0.0012241248,"threshold_uncertainty_score":0.006490767},"labels":[],"label_agreement":null},{"id":"W2095853585","doi":"10.1210/en.2012-1534","title":"Toll-Like Receptor 4 Activation Reduces Adrenal Chromaffin Cell Excitability Through a Nuclear Factor-κB-Dependent Pathway","year":2012,"lang":"en","type":"article","venue":"Endocrinology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Endocrinology; Internal medicine; Adrenal medulla; Rheobase; Receptor; Biology; Chromaffin cell; Chemistry; Catecholamine; Cell biology; Depolarization; Medicine","score_opus":0.01780931028683896,"score_gpt":0.2377441109315841,"score_spread":0.21993480064474513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095853585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99457896,0.0025082415,0.0015017183,0.0001815554,0.00007544545,0.000032072818,0.00023138546,0.00009347837,0.00079715735],"genre_scores_gemma":[0.99532557,0.0011852758,0.00080512173,0.00009773175,0.000026750778,0.000052426705,0.00019673398,0.000011232138,0.002299121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981743,0.000032738928,0.000016123755,0.000032981607,0.00003935755,0.000061497056],"domain_scores_gemma":[0.99981946,0.000028473358,0.00004814675,0.000018338413,0.000023826917,0.00006176001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014651858,0.0002898534,0.00030133227,0.00018274032,0.0000991742,0.0002723602,0.0001973351,0.0002650008,0.0025582218],"category_scores_gemma":[0.0002444187,0.0001356938,0.00034562385,0.00008197355,0.00023097423,0.00024022153,0.00018555472,0.0007497271,0.00024441263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011453356,0.000097081036,0.00030821204,0.00008896592,0.000019023746,0.000040641662,0.000015423673,0.00003625519,0.9966174,0.000029227846,0.000042848686,0.0015596489],"study_design_scores_gemma":[0.00017623515,0.003231861,0.015640246,0.000019306668,0.000076329656,0.00024130105,0.00012276051,0.0010643209,0.9770761,0.00013926571,0.0022002761,0.000012079041],"about_ca_topic_score_codex":0.00038898241,"about_ca_topic_score_gemma":0.0006004053,"teacher_disagreement_score":0.0025582218,"about_ca_system_score_codex":0.00018494196,"about_ca_system_score_gemma":0.00023558576,"threshold_uncertainty_score":0.008558154},"labels":[],"label_agreement":null},{"id":"W2095869307","doi":"10.4049/jimmunol.1400895","title":"Single-Cell Analysis of Innate Cytokine Responses to Pattern Recognition Receptor Stimulation in Children across Four Continents","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Innate immune system; Immunology; Biology; Acquired immune system; Immunity; Cytokine; Stimulation; Cohort; Receptor; Pattern recognition receptor; Immune system; Medicine; Neuroscience; Internal medicine; Genetics","score_opus":0.01675353734497367,"score_gpt":0.2507384266025388,"score_spread":0.23398488925756514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095869307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999556,0.00009551372,0.000056219924,0.000007442657,0.0000016215898,0.0000058019996,0.00017539722,0.0000015218558,0.000100335026],"genre_scores_gemma":[0.9989496,0.00016190506,0.000257187,0.000030307083,0.000002893722,0.000025204266,0.00037225717,0.0000034997515,0.00019718477],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997615,0.00003750421,0.000020555784,0.00006036786,0.0000484889,0.00007164459],"domain_scores_gemma":[0.99979216,0.00004672748,0.0000518993,0.00001851153,0.00004768401,0.00004304951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026157408,0.00027869336,0.00039752922,0.0009272369,0.000504642,0.00054852,0.0002043541,0.00028068502,0.0008238064],"category_scores_gemma":[0.0007862902,0.00021126686,0.0002625976,0.0008052545,0.00044890275,0.00016838248,0.0004532408,0.00034139396,0.0001702879],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007020151,0.000074420954,0.8864704,0.00008274955,0.00007907419,0.0007913386,0.002142458,0.00014741042,0.10340788,0.00007261884,0.00013514272,0.0058944663],"study_design_scores_gemma":[0.000004626453,0.00016696469,0.99478465,0.0000054507477,0.00002312631,0.0005283968,0.00086245954,0.00006520646,0.0031852568,0.000014608537,0.00035574354,0.0000035128157],"about_ca_topic_score_codex":0.01155402,"about_ca_topic_score_gemma":0.009264577,"teacher_disagreement_score":0.01155402,"about_ca_system_score_codex":0.00039865784,"about_ca_system_score_gemma":0.00027172346,"threshold_uncertainty_score":0.022973537},"labels":[],"label_agreement":null},{"id":"W2095995140","doi":"10.1007/s00296-007-0490-7","title":"Analysis of single nucleotide polymorphisms in Toll-like receptor 4 shows no association with ankylosing spondylitis in a Korean population","year":2007,"lang":"en","type":"article","venue":"Rheumatology International","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; University of Toronto; Memorial University of Newfoundland","funders":"","keywords":"Single-nucleotide polymorphism; Ankylosing spondylitis; Medicine; Immunology; Genotyping; Allele; Pathogenesis; Population; TLR4; Allele frequency; Genetics; Internal medicine; Genotype; Biology; Immune system; Gene","score_opus":0.006433206092364446,"score_gpt":0.2273951183967775,"score_spread":0.22096191230441306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2095995140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99965525,0.000055242377,0.000055561763,0.00002365017,0.0000062460563,0.00000432896,0.00005682136,0.0000011958336,0.00014184446],"genre_scores_gemma":[0.9994399,0.00006712007,0.0000788776,0.000041044823,0.000010458701,0.0000064898686,0.0001062588,0.0000031766397,0.0002465935],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994103,0.00015626017,0.00011519222,0.0001706042,0.000056232955,0.00009138328],"domain_scores_gemma":[0.99927944,0.00018685273,0.00019091423,0.000060641665,0.000107073574,0.00017498419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054523634,0.00090504024,0.0005922291,0.0011568982,0.0009072691,0.0006223085,0.00064831454,0.0006493163,0.0029741274],"category_scores_gemma":[0.0012868452,0.000569569,0.00094941835,0.001125653,0.0006434823,0.00041365172,0.0003510751,0.0006413363,0.00036392178],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001157426,0.00036256886,0.97888625,0.000034219287,0.000478062,0.0024214208,0.0007788612,0.000057501962,0.013024192,0.00008996497,0.00013813777,0.0025713416],"study_design_scores_gemma":[0.0000802529,0.00074181287,0.9938571,0.00000994283,0.00034054858,0.0028789113,0.0011961047,0.00019398556,0.00038186912,0.000061029197,0.00024364768,0.000014825034],"about_ca_topic_score_codex":0.0062934407,"about_ca_topic_score_gemma":0.0040844567,"teacher_disagreement_score":0.0062934407,"about_ca_system_score_codex":0.00023079898,"about_ca_system_score_gemma":0.00037970766,"threshold_uncertainty_score":0.012513638},"labels":[],"label_agreement":null},{"id":"W2096134520","doi":"10.1189/jlb.0111051","title":"In vivo-transmigrated human neutrophils are resistant to antiapoptotic stimulation","year":2011,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institute for Military and Veteran Health Research; Stiftelsen Jubileumsklinikens Forskningsfond mot Cancer; Göteborgs Läkaresällskap; Göteborgs Tandläkare-Sällskap; Kungl. Skogs- och Lantbruksakademien; Vetenskapsrådet; Canadian Institutes of Health Research; IngaBritt och Arne Lundbergs Forskningsstiftelse; Svenska Forskningsrådet Formas","keywords":"Biology; In vivo; Stimulation; Cell biology; Immunology; Microbiology; Neuroscience; Genetics","score_opus":0.02999973778651953,"score_gpt":0.27422818125146164,"score_spread":0.2442284434649421,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096134520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99327385,0.0026572866,0.0025987413,0.00009439491,0.000025466159,0.000049368708,0.00032135696,0.000026850621,0.0009526933],"genre_scores_gemma":[0.9946767,0.00086476334,0.0017659131,0.0000872035,0.000013590151,0.000044091383,0.0010621373,0.000009074542,0.0014765363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969304,0.000093741546,0.000038976203,0.000049240192,0.000073469186,0.00005167557],"domain_scores_gemma":[0.9998233,0.000023477163,0.0000544439,0.000041842828,0.00003101824,0.000025987198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023601494,0.00023401844,0.00023565741,0.00012644648,0.00008991182,0.00031127306,0.00016579246,0.0002679665,0.0012048658],"category_scores_gemma":[0.00025690158,0.000081817365,0.00014951984,0.00013511485,0.00009342044,0.00016935568,0.00016366543,0.000506614,0.0004059976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031696944,0.00005536505,0.0009767774,0.000032010885,0.000009098148,0.00010263314,0.000041539653,0.000021904143,0.9958652,0.00004332118,0.000044378463,0.0024907042],"study_design_scores_gemma":[0.000058135407,0.0015847598,0.039374847,0.000017318222,0.000042069852,0.002064904,0.00010363915,0.00043928024,0.95157087,0.00007619494,0.004660139,0.000007830031],"about_ca_topic_score_codex":0.00013195035,"about_ca_topic_score_gemma":0.00016930919,"teacher_disagreement_score":0.0012048658,"about_ca_system_score_codex":0.00009708281,"about_ca_system_score_gemma":0.000076883414,"threshold_uncertainty_score":0.0040307045},"labels":[],"label_agreement":null},{"id":"W2096162040","doi":"10.1039/c2ra01149b","title":"Synthesis and immunostimulatory activity of diethanolamine-containing lipid A mimics","year":2012,"lang":"en","type":"article","venue":"RSC Advances","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; Lakehead University","funders":"University of Alberta","keywords":"Lipid A; Chemistry; Diethanolamine; TLR4; Immune system; Receptor; Toll-like receptor; Biochemistry; Innate immune system; Biology; Lipopolysaccharide; Immunology","score_opus":0.011913467787847007,"score_gpt":0.2502717901611561,"score_spread":0.23835832237330906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096162040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884317,0.0020762037,0.006551927,0.00008615894,0.000040497114,0.00009766905,0.00030631584,0.00006485644,0.0023447236],"genre_scores_gemma":[0.9872922,0.001371284,0.008710234,0.000053239386,0.000014903036,0.00008174453,0.00038260952,0.000017317561,0.0020764829],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993134,0.00001635007,0.000009126022,0.00001270024,0.000016512504,0.000013881656],"domain_scores_gemma":[0.9999285,0.000009322824,0.000026682063,0.000010086895,0.000009094362,0.000016347558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010231341,0.00036400626,0.0001408577,0.00017493288,0.00010525529,0.00016867221,0.00023455029,0.00031029707,0.0005333577],"category_scores_gemma":[0.0001541673,0.000112078706,0.0002075112,0.00015167176,0.00011393308,0.00022935992,0.0002280507,0.00031611486,0.00027344673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009124189,0.000026385796,0.00006925937,0.000044399647,0.000004893405,0.00007246168,0.000009988792,0.00019974766,0.9976956,0.0001589958,0.00002094257,0.0016061722],"study_design_scores_gemma":[0.000010432944,0.00031129536,0.00026081238,0.0000032368207,0.000008898155,0.00008227318,0.0000049674227,0.00027816577,0.99688524,0.000028957715,0.0021214043,0.0000042166243],"about_ca_topic_score_codex":0.00019305425,"about_ca_topic_score_gemma":0.00021325465,"teacher_disagreement_score":0.0005333577,"about_ca_system_score_codex":0.00020190465,"about_ca_system_score_gemma":0.00015331381,"threshold_uncertainty_score":0.0017843246},"labels":[],"label_agreement":null},{"id":"W2096584779","doi":"10.4049/jimmunol.181.9.6481","title":"Signaling through MyD88 Regulates Leukocyte Recruitment after Brain Injury","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"Universitätsspital Basel","keywords":"Infiltration (HVAC); Hippocampal formation; TLR2; Microglia; Receptor; Biology; Hippocampus; TLR4; Inflammation; Knockout mouse; Cell biology; Immunology; Endocrinology; Internal medicine; Medicine","score_opus":0.03373268247313254,"score_gpt":0.26972488161160585,"score_spread":0.2359921991384733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096584779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970542,0.0012131677,0.00097295095,0.00008116179,0.0000128378515,0.000017558745,0.00014579727,0.00004255643,0.00045990432],"genre_scores_gemma":[0.9957699,0.0010628722,0.0012734692,0.00008161271,0.000011205518,0.000060530612,0.00030638304,0.000018685208,0.001415343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976915,0.00004311569,0.000021293536,0.00004363537,0.000036915542,0.00008585372],"domain_scores_gemma":[0.9998267,0.000010574074,0.000086799686,0.000010842002,0.000019648924,0.000045439614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001931756,0.00042471796,0.00035017493,0.00031797166,0.00016151546,0.00036129734,0.00021655129,0.00039282237,0.00076757325],"category_scores_gemma":[0.00020651284,0.00021662275,0.0002775214,0.00013912174,0.00035207643,0.00027246616,0.000364021,0.0007415151,0.0004525699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032667123,0.000026317814,0.0007948827,0.000032355103,0.0000027986018,0.00006344339,0.000025049058,0.000028417155,0.99744344,0.00003620916,0.000031385374,0.0011890391],"study_design_scores_gemma":[0.00009214991,0.0008103371,0.09849445,0.00004467874,0.000039776387,0.0008041299,0.00019278358,0.0013583734,0.8960484,0.00020228204,0.0018982434,0.000014371281],"about_ca_topic_score_codex":0.0002127932,"about_ca_topic_score_gemma":0.00029507076,"teacher_disagreement_score":0.00076757325,"about_ca_system_score_codex":0.00034495315,"about_ca_system_score_gemma":0.00018934351,"threshold_uncertainty_score":0.002567768},"labels":[],"label_agreement":null},{"id":"W2096585076","doi":"10.4049/jimmunol.0904207","title":"Ischemia Reperfusion Induces IFN Regulatory Factor 4 in Renal Dendritic Cells, which Suppresses Postischemic Inflammation and Prevents Acute Renal Failure","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"","keywords":"Inflammation; Medicine; Ischemia; Renal ischemia; Reperfusion injury; Immunology; Cardiology; Pharmacology; Internal medicine","score_opus":0.005064089351872513,"score_gpt":0.21804515014045375,"score_spread":0.21298106078858123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096585076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99149853,0.002331343,0.003424707,0.00030153536,0.00016167352,0.00011909219,0.00028321435,0.00031167845,0.0015681708],"genre_scores_gemma":[0.9934227,0.0008285491,0.0028385632,0.00016249818,0.000055102097,0.00012219328,0.0005966464,0.00002908374,0.0019447235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978524,0.00004073179,0.000029763773,0.00003203826,0.000040229577,0.000071953946],"domain_scores_gemma":[0.99982363,0.000016162838,0.000052746665,0.000037017362,0.0000207418,0.00004968184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034588724,0.00040787976,0.0005397435,0.0002656742,0.00018836807,0.00034304874,0.00029098944,0.0003697202,0.0012872546],"category_scores_gemma":[0.00023799602,0.00018436623,0.00033583658,0.00014021421,0.00031023822,0.00024437465,0.00020266167,0.0011137871,0.00048511257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009663767,0.00030757627,0.00029023696,0.000058943566,0.000010599017,0.00004046761,0.000011652182,0.0001141209,0.9941585,0.0001176822,0.00014246855,0.0037815196],"study_design_scores_gemma":[0.00043262055,0.002953801,0.0035442824,0.000016872822,0.00006884824,0.00039074058,0.000028602313,0.0011368289,0.9870101,0.00011794748,0.0042895945,0.000009752276],"about_ca_topic_score_codex":0.00026800486,"about_ca_topic_score_gemma":0.0004064495,"teacher_disagreement_score":0.0012872546,"about_ca_system_score_codex":0.00024981252,"about_ca_system_score_gemma":0.00042329865,"threshold_uncertainty_score":0.004306257},"labels":[],"label_agreement":null},{"id":"W2096729904","doi":"10.4049/jimmunol.0901474","title":"AS04, an Aluminum Salt- and TLR4 Agonist-Based Adjuvant System, Induces a Transient Localized Innate Immune Response Leading to Enhanced Adaptive Immunity","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":742,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"GlaxoSmithKline (Canada)","funders":"","keywords":"Adjuvant; Innate immune system; Cytokine; Immune system; TLR4; Agonist; Immunity; Immunology; Acquired immune system; Biology; Cell biology; Receptor; Biochemistry","score_opus":0.01415199173789151,"score_gpt":0.25433354480714176,"score_spread":0.24018155306925026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096729904","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98410827,0.004817396,0.008981826,0.00012838836,0.00010903914,0.00011503534,0.00019378874,0.00015757167,0.0013885986],"genre_scores_gemma":[0.98469615,0.0024933342,0.0091402475,0.0001494499,0.000070606446,0.00012247694,0.00037753014,0.000016793998,0.0029334005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998497,0.000045031433,0.000011151665,0.000024617344,0.000038709575,0.000030655454],"domain_scores_gemma":[0.99992216,0.000013020655,0.000027042306,0.0000070331726,0.000010369365,0.000020348072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019846956,0.0005878648,0.0002946592,0.0004223907,0.00010321279,0.00026195595,0.00028630462,0.00043573295,0.0009954552],"category_scores_gemma":[0.00012385963,0.00015098276,0.0003603088,0.0001403133,0.00025287943,0.000266211,0.00026038993,0.00039244656,0.00031446313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002296772,0.00006623566,0.000089692774,0.00007072184,0.000007745532,0.000019701985,0.0000046349633,0.00007075754,0.9971717,0.000046428402,0.00003118161,0.002191612],"study_design_scores_gemma":[0.000056984518,0.0031855677,0.00044440315,0.000007219249,0.000025065976,0.00016544698,0.0000115370085,0.00046920028,0.9928757,0.0000481666,0.0027047954,0.0000060280436],"about_ca_topic_score_codex":0.00018760287,"about_ca_topic_score_gemma":0.00029800902,"teacher_disagreement_score":0.0009954552,"about_ca_system_score_codex":0.00022319579,"about_ca_system_score_gemma":0.00029712843,"threshold_uncertainty_score":0.0033301115},"labels":[],"label_agreement":null},{"id":"W2096977835","doi":"10.1016/s1074-7613(03)00148-1","title":"The MAGUK Family Protein CARD11 Is Essential for Lymphocyte Activation","year":2003,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":329,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Biology; Cell biology; Guanylate kinase; Acquired immune system; Immunological synapse; Innate immune system; Signal transduction; Receptor; Immune system; Co-stimulation; T cell; T-cell receptor; Immunology; Genetics; CD28","score_opus":0.012443096850246683,"score_gpt":0.2437585279488091,"score_spread":0.2313154310985624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096977835","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9650424,0.013004306,0.013236521,0.00068631535,0.0003962167,0.00004649949,0.0010613607,0.00036919976,0.006157157],"genre_scores_gemma":[0.99144506,0.0014561592,0.0022886556,0.00007577475,0.000026430953,0.000018862167,0.00078012934,0.000032575674,0.003876226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996822,0.000057888225,0.000029366307,0.000060545368,0.00006141542,0.000108662854],"domain_scores_gemma":[0.99973184,0.00003524945,0.00006454642,0.000039073402,0.000044116012,0.000085077045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024318717,0.00047129387,0.00034302275,0.00025522994,0.00044085016,0.00094354956,0.00033885104,0.00046007868,0.0021393257],"category_scores_gemma":[0.00041829693,0.00025739512,0.00025814297,0.00017783447,0.00032063865,0.0006062661,0.0008607174,0.00088398956,0.0014159497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000451264,0.000019908013,0.0012927667,0.00008059233,0.000011339556,0.00022466661,0.000019101743,0.00011948693,0.991143,0.0011387005,0.00054013275,0.004958993],"study_design_scores_gemma":[0.000038129234,0.00017299301,0.025592253,0.000022470665,0.00003614509,0.0016964395,0.0001275011,0.0018013456,0.9495251,0.0005858822,0.020381672,0.000020178031],"about_ca_topic_score_codex":0.0003902728,"about_ca_topic_score_gemma":0.0005291379,"teacher_disagreement_score":0.0021393257,"about_ca_system_score_codex":0.0005303333,"about_ca_system_score_gemma":0.00030056192,"threshold_uncertainty_score":0.0071567893},"labels":[],"label_agreement":null},{"id":"W2097082261","doi":"10.1111/j.1462-5822.2007.01062.x","title":"The pattern-recognition molecule Nod1 is localized at the plasma membrane at sites of bacterial interaction","year":2007,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":165,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Federation of European Biochemical Societies","keywords":"NOD1; Biology; Cell biology; Peptidoglycan; Cytoskeleton; NOD2; Actin; Actin cytoskeleton; Cytosol; Innate immune system; Cell; Biochemistry; Receptor; Gene","score_opus":0.011125912011225354,"score_gpt":0.21904537833083662,"score_spread":0.20791946631961128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097082261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98035735,0.008851908,0.0066091237,0.00033855802,0.000041062704,0.0000150223395,0.00046070394,0.000129305,0.0031970458],"genre_scores_gemma":[0.99122506,0.0026292312,0.0023463443,0.00005745442,0.000018520981,0.000014570749,0.0006164377,0.000015727175,0.0030766146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998555,0.000024305615,0.000007507945,0.00004400763,0.0000383164,0.000030426034],"domain_scores_gemma":[0.9999181,0.000009261227,0.00002725551,0.000009727041,0.00001597947,0.000019656642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001308379,0.00027227998,0.00024965682,0.00021677399,0.0003130805,0.00040165562,0.00013982021,0.00042915385,0.0018509403],"category_scores_gemma":[0.00018492556,0.00015033028,0.00014929275,0.0001820478,0.00029424147,0.0003591274,0.00041605462,0.000331188,0.0011388937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070431444,0.0000028819193,0.0003473528,0.000059755064,0.0000021231126,0.0001638319,0.000014797612,0.000017285169,0.99773705,0.00011513445,0.000039281007,0.0014301117],"study_design_scores_gemma":[0.000013290258,0.00014365927,0.02091217,0.000022272536,0.000014666134,0.0033554872,0.00014574564,0.0004936033,0.96534514,0.0002942742,0.009251805,0.000007984522],"about_ca_topic_score_codex":0.00016887739,"about_ca_topic_score_gemma":0.00013862211,"teacher_disagreement_score":0.0018509403,"about_ca_system_score_codex":0.00031887024,"about_ca_system_score_gemma":0.0001251394,"threshold_uncertainty_score":0.006191969},"labels":[],"label_agreement":null},{"id":"W2097184817","doi":"10.1189/jlb.0510265","title":"Membrane CD14, but not soluble CD14, is used by exoenzyme S from<i>P. aeruginosa</i>to signal proinflammatory cytokine production","year":2011,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"University of Calgary; Cystic Fibrosis Foundation","keywords":"Proinflammatory cytokine; Biology; CD14; Cytokine; Exoenzyme; Microbiology; Immunology; Biochemistry; Immune system; Enzyme; Inflammation","score_opus":0.025411384410302978,"score_gpt":0.23344632077963737,"score_spread":0.2080349363693344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097184817","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914527,0.0012853912,0.005709451,0.00018532154,0.0000406066,0.00003902392,0.00015903343,0.00004736006,0.0010811014],"genre_scores_gemma":[0.9888227,0.0009955986,0.006801583,0.00010999764,0.000021308606,0.000048335518,0.00057684025,0.000016311815,0.0026073616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997013,0.000061343475,0.000035145058,0.00005345149,0.00007596974,0.00007283676],"domain_scores_gemma":[0.9998838,0.000018375675,0.000040461833,0.00001806539,0.000016119877,0.000023220722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022104387,0.00044203154,0.00031419523,0.00015147174,0.00013044749,0.00046527828,0.00015730706,0.00035340252,0.0011910774],"category_scores_gemma":[0.0002115541,0.00015755955,0.00035149924,0.00012241611,0.00022578784,0.00022924121,0.00036150045,0.00050595525,0.00047336562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008498003,0.000016625774,0.00038762274,0.000020740084,0.000003592618,0.000041462867,0.0000058218707,0.000017909704,0.99823856,0.000040822848,0.000021829046,0.0011199919],"study_design_scores_gemma":[0.000012713342,0.00023797802,0.005438225,0.000006746289,0.00000876338,0.00040545673,0.00003004426,0.000342996,0.99104065,0.000034881647,0.0024385743,0.0000029327455],"about_ca_topic_score_codex":0.0003197305,"about_ca_topic_score_gemma":0.00047259126,"teacher_disagreement_score":0.0011910774,"about_ca_system_score_codex":0.00027166647,"about_ca_system_score_gemma":0.00018711197,"threshold_uncertainty_score":0.0039845705},"labels":[],"label_agreement":null},{"id":"W2097364950","doi":"10.1084/jem.20111354","title":"A genomic storm in critically injured humans","year":2011,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1223,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"National Center for Advancing Translational Sciences; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences","keywords":"Transcriptome; Immune system; Innate immune system; Inflammation; Gene; Immunology; Biology; Systemic inflammatory response syndrome; Cytokine storm; Medicine; Gene expression; Bioinformatics; Genetics; Sepsis; Internal medicine; Disease","score_opus":0.028205291456140303,"score_gpt":0.2859954687068848,"score_spread":0.2577901772507445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097364950","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896158,0.0039624567,0.0017482294,0.0012471362,0.000069522655,0.00002388652,0.0002682832,0.00005722258,0.0030075333],"genre_scores_gemma":[0.99746203,0.0010030752,0.00043491126,0.00055178796,0.00010060945,0.000014928896,0.00019704424,0.0000056080294,0.00022995804],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998871,0.000030343626,0.0000066456732,0.00003372316,0.000016642292,0.000025505931],"domain_scores_gemma":[0.99984944,0.000020711677,0.00005710241,0.000015199184,0.000012753087,0.000044762615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001117709,0.00013756186,0.0002482999,0.00027202905,0.00033576184,0.00039837236,0.00008159967,0.00032102037,0.0011661729],"category_scores_gemma":[0.0004701335,0.000079538186,0.00009145745,0.00023721739,0.00052618486,0.00025422982,0.0004363785,0.0004397377,0.00020106263],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0072647645,0.00047262874,0.371277,0.0008082483,0.00013769335,0.025590165,0.0031572005,0.0015265434,0.4240686,0.008220765,0.008072255,0.14940406],"study_design_scores_gemma":[0.000093517876,0.003941298,0.8957321,0.00020360756,0.00008886019,0.040711556,0.0034250345,0.0013498076,0.021701733,0.014393452,0.018275624,0.0000833323],"about_ca_topic_score_codex":0.00026311612,"about_ca_topic_score_gemma":0.00018145858,"teacher_disagreement_score":0.0011661729,"about_ca_system_score_codex":0.0002564491,"about_ca_system_score_gemma":0.00016482026,"threshold_uncertainty_score":0.0039011836},"labels":[],"label_agreement":null},{"id":"W2097495458","doi":"10.4049/jimmunol.1003789","title":"<i>Escherichia coli</i> Heat-Labile Enterotoxin Promotes Protective Th17 Responses against Infection by Driving Innate IL-1 and IL-23 Production","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Inflammasome; Heat-labile enterotoxin; Enterotoxin; Adjuvant; Innate immune system; CD80; Pertussis toxin; Microbiology; CD86; MAPK/ERK pathway; Bordetella pertussis; Immunology; Chemistry; Biology; Immune system; Escherichia coli; Inflammation; T cell; Signal transduction; Cell biology; In vitro; CD40; Cytotoxic T cell; Biochemistry; G protein","score_opus":0.011677642104225783,"score_gpt":0.21975402861717033,"score_spread":0.20807638651294455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097495458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986048,0.003035977,0.005427581,0.00057576026,0.00020703554,0.00007035819,0.0007858284,0.0003217034,0.003527827],"genre_scores_gemma":[0.9905037,0.0014258913,0.0031240205,0.00027303203,0.00006321533,0.000044194676,0.00071631983,0.000051103096,0.0037985402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983895,0.000035414836,0.000021682583,0.00002226336,0.000037949452,0.000043742246],"domain_scores_gemma":[0.9999049,0.0000075593425,0.000046184727,0.000010753503,0.000011943411,0.000018801562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013002525,0.00045573278,0.0002508345,0.00017682875,0.00010106062,0.00032162108,0.00011404743,0.00023543867,0.0016665586],"category_scores_gemma":[0.00009499694,0.00008843674,0.00024690825,0.00013011653,0.0001986388,0.00017503432,0.00014574816,0.0006697515,0.0005479737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018804058,0.000032095333,0.00015738596,0.000049202165,0.0000036013705,0.00002455096,0.0000039762203,0.00004052713,0.9983267,0.00005909555,0.00011262208,0.0010022338],"study_design_scores_gemma":[0.000019412055,0.00047901477,0.002938065,0.000012659654,0.00001227299,0.00020388106,0.000014367833,0.00040033984,0.9929911,0.000037958416,0.002887771,0.0000030748854],"about_ca_topic_score_codex":0.00024119762,"about_ca_topic_score_gemma":0.0003750789,"teacher_disagreement_score":0.0016665586,"about_ca_system_score_codex":0.00020595988,"about_ca_system_score_gemma":0.00016835793,"threshold_uncertainty_score":0.00557518},"labels":[],"label_agreement":null},{"id":"W2097895350","doi":"10.1189/jlb.70.6.977","title":"Toll-like receptor 4-mediated activation of murine mast cells","year":2001,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":210,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; TLR2; TLR4; Toll-like receptor; Mast cell; Tumor necrosis factor alpha; Receptor; Cytokine; Cell biology; Lipopolysaccharide; Immunology; CD14; Interleukin 33; Microbiology; Signal transduction; Innate immune system; Immune system; Interleukin","score_opus":0.011723401049360496,"score_gpt":0.237001909505391,"score_spread":0.22527850845603048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2097895350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96555346,0.007381071,0.01287386,0.0006959635,0.000426296,0.0010370385,0.0047705113,0.00036458336,0.0068971757],"genre_scores_gemma":[0.9661013,0.0035815118,0.014891207,0.00041970963,0.00016681814,0.0009004898,0.0032890898,0.000060462713,0.010589467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926907,0.00018259657,0.00007525719,0.00012238535,0.0001730538,0.00017757207],"domain_scores_gemma":[0.99979335,0.000038233025,0.00004990713,0.000035877096,0.0000277411,0.000054882246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006310402,0.0010803461,0.0004290743,0.0005885743,0.00028017946,0.00031508884,0.00046611993,0.00072295207,0.0038777955],"category_scores_gemma":[0.00022452253,0.00045548996,0.0007624094,0.0002329894,0.00027397048,0.0003253229,0.00044265963,0.0015812952,0.0018585136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005734591,0.00011524497,0.00013793899,0.0001099542,0.0000069897037,0.00016620015,0.000028862009,0.000091164184,0.99679273,0.00012895603,0.00011644908,0.0017319411],"study_design_scores_gemma":[0.00056579226,0.002879608,0.0038352686,0.000038248603,0.00003771232,0.0006785795,0.000044757126,0.0017030949,0.98192674,0.00024047375,0.008036232,0.000013400529],"about_ca_topic_score_codex":0.0002663227,"about_ca_topic_score_gemma":0.00042890295,"teacher_disagreement_score":0.0038777955,"about_ca_system_score_codex":0.0004196189,"about_ca_system_score_gemma":0.00024110885,"threshold_uncertainty_score":0.012972474},"labels":[],"label_agreement":null},{"id":"W2098431365","doi":"10.3109/10799890903295127","title":"Kinome analysis of Toll-like receptor signaling in bovine monocytes","year":2009,"lang":"en","type":"article","venue":"Journal of Receptors and Signal Transduction","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Genome Canada","keywords":"TLR9; TLR4; Signal transduction; Phosphorylation; Cell biology; Receptor; Biology; Toll-like receptor; Kinome; Lipopolysaccharide; Innate immune system; Immunology; Gene; Biochemistry; Gene expression","score_opus":0.009982006642454893,"score_gpt":0.23267359391325204,"score_spread":0.22269158727079716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098431365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964066,0.0010818818,0.0013891003,0.000030244291,0.000007654702,0.000011081904,0.0004210055,0.00001067777,0.0006418282],"genre_scores_gemma":[0.9973941,0.00032695552,0.0011942919,0.000027063114,0.000004185595,0.00001022643,0.0005822432,0.0000034573552,0.0004574533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986994,0.000022681703,0.000009258539,0.000026286505,0.000030453035,0.00004133827],"domain_scores_gemma":[0.9998846,0.00003037088,0.000028665121,0.000010758118,0.000022702832,0.000023003964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000110640394,0.00011427701,0.00013454685,0.00035220198,0.00015242668,0.00020125021,0.000081344675,0.00020605868,0.0009582831],"category_scores_gemma":[0.00021459699,0.000084771105,0.000110466135,0.00021798024,0.00008687677,0.00010339453,0.00014182727,0.00018435973,0.0002534834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048157285,0.000015080607,0.0031157625,0.000027562288,0.000003877189,0.00010944305,0.00003790216,0.000037919763,0.9947548,0.000053450764,0.000025921205,0.0013366981],"study_design_scores_gemma":[0.000035835834,0.0006388864,0.30775368,0.000020269637,0.000059995302,0.0023085007,0.0002597109,0.0029887387,0.68210375,0.00025826038,0.0035504014,0.000022013039],"about_ca_topic_score_codex":0.0011681308,"about_ca_topic_score_gemma":0.0011651597,"teacher_disagreement_score":0.0011681308,"about_ca_system_score_codex":0.00016909589,"about_ca_system_score_gemma":0.00009229678,"threshold_uncertainty_score":0.0032058358},"labels":[],"label_agreement":null},{"id":"W2098444662","doi":"10.1051/vetres:2003006","title":"Recombinant bovine soluble CD14 reduces severityof experimental <i>Escherichia coli</i> mastitis in mice","year":2003,"lang":"en","type":"article","venue":"Veterinary Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"U.S. Department of Agriculture","keywords":"Lipopolysaccharide; Escherichia coli; Biology; Microbiology; Recombinant DNA; Mastitis; Bacteria; Mammary gland; Pathogenesis; CD14; Tumor necrosis factor alpha; Lipopolysaccharide binding protein; Internal medicine; Immunology; Andrology; Flow cytometry; Medicine; Biochemistry","score_opus":0.07140307182251082,"score_gpt":0.3435138257828599,"score_spread":0.27211075396034906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098444662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951314,0.0018822565,0.00086446415,0.00022727049,0.00008566811,0.00007497316,0.00047199268,0.00025073843,0.0010113389],"genre_scores_gemma":[0.98959,0.0018369113,0.0020908958,0.00026531558,0.000058649483,0.00014775446,0.0012008344,0.000068602145,0.004741002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964046,0.000059583635,0.000041082076,0.00006275193,0.00006926934,0.00012687656],"domain_scores_gemma":[0.99944526,0.00003977133,0.0002258944,0.000037673635,0.00005382431,0.00019757239],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032799304,0.0008285752,0.00074530597,0.00055343396,0.00020059617,0.0004026731,0.0003720609,0.00075711973,0.0011822489],"category_scores_gemma":[0.00026520906,0.0003504376,0.00041817856,0.00023200274,0.00043378095,0.00037298992,0.00025265507,0.0014038661,0.00035303517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039383424,0.0008669954,0.0005222648,0.000115983225,0.000019634163,0.000052750198,0.000031510237,0.00008841294,0.991452,0.00004335415,0.000118757016,0.0027500908],"study_design_scores_gemma":[0.0004741669,0.017869823,0.013305255,0.00005275656,0.00010098149,0.00029465655,0.00011489996,0.001215816,0.96371657,0.00006825865,0.0027675987,0.00001936963],"about_ca_topic_score_codex":0.00063656265,"about_ca_topic_score_gemma":0.0008623284,"teacher_disagreement_score":0.0011822489,"about_ca_system_score_codex":0.0004082649,"about_ca_system_score_gemma":0.00030633563,"threshold_uncertainty_score":0.003955066},"labels":[],"label_agreement":null},{"id":"W2098469346","doi":"10.4049/jimmunol.1002248","title":"The Role of CD14 in Neutrophil Recruitment within the Liver Microcirculation during Endotoxemia","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; Fondation pour la Recherche Médicale; University of Calgary","keywords":"CD14; Inflammation; Proinflammatory cytokine; Sepsis; Lipopolysaccharide; Immunology; Biology; Systemic inflammation; TLR4; Knockout mouse; Medicine; Internal medicine; Immune system; Receptor","score_opus":0.022023993473594447,"score_gpt":0.22038684297611535,"score_spread":0.19836284950252092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098469346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99678934,0.0011604787,0.001563265,0.000049043072,0.000009796424,0.000017105955,0.00004276446,0.000014072076,0.00035417065],"genre_scores_gemma":[0.9967416,0.0005834618,0.0018669913,0.00003290056,0.00000967056,0.000043195403,0.0000787246,0.0000052001765,0.0006383079],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973017,0.000076389755,0.000033144952,0.00004813708,0.000052966392,0.000059226786],"domain_scores_gemma":[0.99974376,0.000027321694,0.000087964174,0.000028919945,0.000041360498,0.000070736154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026119704,0.00024057383,0.00029217536,0.00029660453,0.00015346725,0.00034036947,0.00015904242,0.00034603928,0.0003455369],"category_scores_gemma":[0.00034422893,0.00016136075,0.00015771964,0.00011432193,0.00029333873,0.000299953,0.00031600278,0.0003809181,0.00010855436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005884062,0.000024528386,0.001738707,0.00003690834,0.0000045342235,0.00009506806,0.000029781673,0.000049856324,0.99558216,0.0001222216,0.000013522602,0.0017143517],"study_design_scores_gemma":[0.00008239197,0.0007957617,0.09017607,0.000039558574,0.000056798894,0.0008087149,0.0001668572,0.0035753334,0.90215886,0.00024516106,0.001878138,0.000016325446],"about_ca_topic_score_codex":0.00030233516,"about_ca_topic_score_gemma":0.00033874167,"teacher_disagreement_score":0.00034606055,"about_ca_system_score_codex":0.00034606055,"about_ca_system_score_gemma":0.00023638383,"threshold_uncertainty_score":0.0025109053},"labels":[],"label_agreement":null},{"id":"W2098797664","doi":"10.1016/j.bbamcr.2006.08.003","title":"Differential regulation of lipopolysaccharide and Gram-positive bacteria induced cytokine and chemokine production in splenocytes by Gαi proteins","year":2006,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Molecular Cell Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Splenocyte; Chemokine; Cytokine; Lipopolysaccharide; TLR4; TLR2; CXCL10; Chemistry; Molecular biology; Biology; Immunology; Spleen; Inflammation","score_opus":0.011954313876037848,"score_gpt":0.2587415444299618,"score_spread":0.24678723055392393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098797664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963284,0.0009884055,0.0011150715,0.00017311484,0.00004970406,0.000028663973,0.00044561742,0.000053752385,0.00081733236],"genre_scores_gemma":[0.99478155,0.0007310103,0.0013905138,0.00014360825,0.000041155046,0.000090583126,0.0011224897,0.000025471827,0.0016735864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971503,0.00005670653,0.000020438174,0.00003819694,0.000035542835,0.00013419433],"domain_scores_gemma":[0.9997582,0.00006147195,0.00004222448,0.00004208245,0.000022567514,0.000073588286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023401553,0.00061036914,0.00035692044,0.00036613463,0.00018978781,0.0003409544,0.00022015227,0.00034051356,0.0010889496],"category_scores_gemma":[0.00022325943,0.00021732385,0.0005272866,0.0002819284,0.00042833912,0.00028464792,0.00026831293,0.001122517,0.0004989899],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008899776,0.000044674598,0.00014710253,0.000020369369,0.000003402645,0.000034234392,0.0000133542035,0.000026868345,0.998386,0.000048844428,0.000024801027,0.0003602145],"study_design_scores_gemma":[0.00007188243,0.0007624488,0.01178588,0.000008070509,0.00002292462,0.00010327857,0.0000574697,0.00044983407,0.9860779,0.00008691778,0.00056769914,0.000005716428],"about_ca_topic_score_codex":0.00031147464,"about_ca_topic_score_gemma":0.0003768877,"teacher_disagreement_score":0.0010889496,"about_ca_system_score_codex":0.00032651672,"about_ca_system_score_gemma":0.00022308239,"threshold_uncertainty_score":0.0036429167},"labels":[],"label_agreement":null},{"id":"W2098980327","doi":"10.1128/iai.01549-06","title":"Role of<scp>d</scp>-Alanylation of<i>Streptococcus gordonii</i>Lipoteichoic Acid in Innate and Adaptive Immunity","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipoteichoic acid; Biology; Streptococcus gordonii; Innate immune system; Acquired immune system; Immunity; Microbiology; Streptococcus; Immunology; Bacteria; Immune system; Genetics; Staphylococcus aureus","score_opus":0.008150995476471423,"score_gpt":0.23257301953014953,"score_spread":0.22442202405367812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098980327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983376,0.00047241282,0.0006285543,0.000061261264,0.000006586947,0.000006691455,0.000047980302,0.000010776636,0.00042811653],"genre_scores_gemma":[0.9988807,0.00016228034,0.0004946574,0.000027889819,0.0000022324061,0.000003965404,0.0000901762,0.000004790732,0.00033330868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999049,0.000029067378,0.00000935752,0.000013958975,0.00002133798,0.000021377497],"domain_scores_gemma":[0.9998926,0.000012460219,0.00004105233,0.000011506337,0.000013364219,0.000029056764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001191852,0.0003171518,0.00015606031,0.00006248932,0.00009439382,0.00022902711,0.00014671906,0.00023950936,0.0005034433],"category_scores_gemma":[0.000101245816,0.00007575573,0.00017445632,0.00006124131,0.00021299822,0.00012256924,0.00015858207,0.00023795926,0.00020463641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017848086,0.000009727216,0.00041235972,0.000016929172,0.0000034519028,0.00007004745,0.0000074567647,0.00004561236,0.99880576,0.000051441963,0.000007861746,0.00039086642],"study_design_scores_gemma":[0.000014890735,0.00030388613,0.007098148,0.000005320129,0.000012621211,0.00034133554,0.000050038965,0.00070949335,0.99029094,0.00004872432,0.0011194064,0.00000512247],"about_ca_topic_score_codex":0.0007741949,"about_ca_topic_score_gemma":0.00058877683,"teacher_disagreement_score":0.0007741949,"about_ca_system_score_codex":0.00025073742,"about_ca_system_score_gemma":0.00020258265,"threshold_uncertainty_score":0.001819253},"labels":[],"label_agreement":null},{"id":"W2099065204","doi":"10.1128/iai.72.8.4561-4569.2004","title":"Toll-Like Receptor 2 Represses Nonpilus Adhesin-Induced Signaling in Acute Infections with the <i>Pseudomonas aeruginosa pilA</i> Mutant","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"American Heart Association","keywords":"Bacterial adhesin; Biology; Microbiology; Pilus; Pseudomonas aeruginosa; Mutant; TLR2; Flagellin; Receptor; Immune system; Toll-like receptor; Innate immune system; Gene; Immunology; Virulence; Bacteria; Genetics","score_opus":0.010218589809950029,"score_gpt":0.23096838854008772,"score_spread":0.2207497987301377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099065204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969612,0.00044897638,0.0010603298,0.00014934246,0.00003435254,0.000023635948,0.000434583,0.0000945823,0.0007930782],"genre_scores_gemma":[0.9938949,0.00030824752,0.0017972307,0.00015102162,0.000020132991,0.00008110586,0.0008092063,0.000050983923,0.0028872145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958915,0.00008473165,0.00004079591,0.00006824149,0.00008813588,0.00012896249],"domain_scores_gemma":[0.9996568,0.000040807383,0.00011126288,0.000034895187,0.000020264602,0.00013589184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023659195,0.0006347966,0.00038377367,0.0002938504,0.00018626945,0.00043430537,0.000351577,0.00051012635,0.0018439518],"category_scores_gemma":[0.00016497151,0.00030011177,0.00045586744,0.00012609574,0.00043246284,0.00024237028,0.0002983439,0.001425996,0.0007754908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014400897,0.000048113194,0.000069004585,0.0000186834,0.000002018904,0.000035586636,0.0000066137945,0.000014259907,0.999479,0.000026382215,0.000021411555,0.00013494797],"study_design_scores_gemma":[0.00006664148,0.00064175646,0.008093552,0.000012784918,0.000013075478,0.00038590326,0.00006170522,0.0010304675,0.9886231,0.000053883632,0.0010089638,0.000008281041],"about_ca_topic_score_codex":0.00045607844,"about_ca_topic_score_gemma":0.00066079653,"teacher_disagreement_score":0.0018439518,"about_ca_system_score_codex":0.00033390944,"about_ca_system_score_gemma":0.00029904928,"threshold_uncertainty_score":0.0061686635},"labels":[],"label_agreement":null},{"id":"W2099214157","doi":"10.1089/108729001753231713","title":"CpG Motif Identification for Veterinary and Laboratory Species Demonstrates That Sequence Recognition Is Highly Conserved","year":2001,"lang":"en","type":"article","venue":"Antisense and Nucleic Acid Drug Development","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":234,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Immunostimulant; CpG Oligodeoxynucleotide; CpG site; Computational biology; Immune system; Conserved sequence; In vitro; DNA sequencing; Sequence motif; DNA; Immunology; Genetics; Gene; Base sequence; DNA methylation; Gene expression","score_opus":0.04572298829093271,"score_gpt":0.2480118923916766,"score_spread":0.20228890410074388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099214157","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9553515,0.0034277108,0.03595497,0.0001739888,0.000057570425,0.00025307736,0.00082119537,0.00023084196,0.0037291625],"genre_scores_gemma":[0.93527555,0.0020440922,0.058165815,0.00015120159,0.000025739728,0.00018607872,0.0019347529,0.000068539186,0.0021481884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996706,0.00006695461,0.000047968282,0.0000809567,0.000079887715,0.000053644824],"domain_scores_gemma":[0.99937916,0.0001584146,0.00020277155,0.000078583966,0.00010305246,0.000077992656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044728388,0.00043292152,0.0003309806,0.00060901465,0.00026277118,0.00023123247,0.00022416125,0.0005399702,0.0030437764],"category_scores_gemma":[0.00074582425,0.0001570755,0.00027792627,0.0003009255,0.00027780412,0.00017867802,0.00027884197,0.00045533807,0.0009571129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007536173,0.000025151176,0.0006611328,0.00008338633,0.000005782316,0.000025566504,0.000013063212,0.000050124763,0.9924563,0.00007457934,0.00003346016,0.0064960546],"study_design_scores_gemma":[0.000013374356,0.0013363832,0.0071022175,0.000026087062,0.000038113514,0.001075443,0.000033054497,0.00043455826,0.983519,0.00011958532,0.0062888977,0.000013253984],"about_ca_topic_score_codex":0.00029615214,"about_ca_topic_score_gemma":0.0012353802,"teacher_disagreement_score":0.0030437764,"about_ca_system_score_codex":0.00018274346,"about_ca_system_score_gemma":0.00039042404,"threshold_uncertainty_score":0.01018244},"labels":[],"label_agreement":null},{"id":"W2099226585","doi":"10.1128/jvi.01036-06","title":"Induction of Innate Immunity against Herpes Simplex Virus Type 2 Infection via Local Delivery of Toll-Like Receptor Ligands Correlates with Beta Interferon Production","year":2006,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Innate immune system; TLR2; Herpes simplex virus; TLR3; Interferon; Immunology; Virology; Tumor necrosis factor alpha; TLR9; TLR4; Alpha interferon; Interferon type I; Interferon gamma; Toll-like receptor; Cytokine; Virus; Inflammation; Immune system","score_opus":0.007189988796909921,"score_gpt":0.21272470144268915,"score_spread":0.20553471264577922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099226585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931443,0.0025811237,0.0027390392,0.00005939186,0.00003523398,0.000028903518,0.00021671232,0.00010209223,0.0010930724],"genre_scores_gemma":[0.99413365,0.0015492992,0.0023267563,0.000057663143,0.00002762247,0.000054216333,0.0004050241,0.000022971466,0.0014228107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990106,0.000017305209,0.000009627711,0.000024980482,0.000020064075,0.000027011012],"domain_scores_gemma":[0.99986064,0.00002383967,0.00005153712,0.000019836953,0.000011055404,0.00003309722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013698278,0.0003386227,0.00018403832,0.00012568076,0.000054208405,0.00027801958,0.00009404137,0.00016730174,0.0008904079],"category_scores_gemma":[0.000108643835,0.00010059892,0.00013705647,0.000068517154,0.00019215823,0.00017412013,0.00012677861,0.00047916544,0.00032283575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001098273,0.000018747995,0.00028421904,0.000030506373,0.0000023713012,0.00001855479,0.0000049323426,0.000016751574,0.9984225,0.00001845825,0.000014410245,0.0010587027],"study_design_scores_gemma":[0.000023637986,0.0009505667,0.01516524,0.000016207321,0.000015562204,0.000364794,0.00002750645,0.00046104123,0.98177093,0.00003850555,0.0011625409,0.0000034558425],"about_ca_topic_score_codex":0.00010317726,"about_ca_topic_score_gemma":0.00013409306,"teacher_disagreement_score":0.0008904079,"about_ca_system_score_codex":0.00014584519,"about_ca_system_score_gemma":0.00009388967,"threshold_uncertainty_score":0.0029786825},"labels":[],"label_agreement":null},{"id":"W2099456894","doi":"10.1111/j.1600-0897.2008.00652.x","title":"ORIGINAL ARTICLE: Ecology of Danger‐Dependent Cytokine‐Boosted Spontaneous Abortion in the CBA × DBA/2 Mouse Model: II Fecal LPS Levels in Colonies with Different Basal Abortion Rates","year":2008,"lang":"en","type":"article","venue":"American Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cytokine; Biology; Abortion; Lipopolysaccharide; Endogeny; Endocrinology; Tumor necrosis factor alpha; Abortifacient; Andrology; Internal medicine; Immunology; Pregnancy; Medicine","score_opus":0.011273844698014807,"score_gpt":0.24493312081533275,"score_spread":0.23365927611731793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099456894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99091035,0.0018434532,0.0031636131,0.00020685812,0.00010358329,0.000105635656,0.0010611466,0.00019835513,0.002407037],"genre_scores_gemma":[0.9786124,0.0016700412,0.006854993,0.00018501272,0.00010304592,0.00024507983,0.0022839487,0.0001348283,0.009910741],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999734,0.000032914882,0.000026270225,0.00007984883,0.00007720711,0.000049773742],"domain_scores_gemma":[0.9995865,0.000047285343,0.00012350049,0.00004950709,0.00003243257,0.00016086161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002822272,0.00063093763,0.00037745704,0.0011413803,0.0002791247,0.0004157418,0.0003414506,0.00044357203,0.0034429727],"category_scores_gemma":[0.00019872045,0.00017910002,0.00039881008,0.00026947452,0.00058235606,0.0003142117,0.00032834406,0.0011043808,0.0007662537],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017705347,0.0004128482,0.0011757938,0.00009139966,0.000014445825,0.00025491472,0.000047723788,0.00005559293,0.99302673,0.00018578026,0.0001310435,0.0028331147],"study_design_scores_gemma":[0.00019314399,0.005268666,0.022334114,0.000044798093,0.00008288161,0.002573619,0.000102907514,0.0008434598,0.9637627,0.00021397672,0.004553052,0.000026779058],"about_ca_topic_score_codex":0.00039113464,"about_ca_topic_score_gemma":0.0003696876,"teacher_disagreement_score":0.0034429727,"about_ca_system_score_codex":0.00033065517,"about_ca_system_score_gemma":0.00021227523,"threshold_uncertainty_score":0.011517882},"labels":[],"label_agreement":null},{"id":"W2099633666","doi":"10.1161/circulationaha.105.536433","title":"Myeloid Differentiation Factor-88 Plays a Crucial Role in the Pathogenesis of Coxsackievirus B3–Induced Myocarditis and Influences Type I Interferon Production","year":2005,"lang":"en","type":"article","venue":"Circulation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":178,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Bayer Yakuhin; Japan Heart Foundation; University of Toronto; Heart and Stroke Foundation of Canada","keywords":"Myocarditis; Cytokine; Medicine; Tumor necrosis factor alpha; Interferon; Immunology; Inflammation; Pathogenesis; Viral Myocarditis; Internal medicine","score_opus":0.017992871292746283,"score_gpt":0.23798951704458757,"score_spread":0.21999664575184127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099633666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99622405,0.002167878,0.0007848977,0.00010631643,0.000021957008,0.000019817973,0.000108398235,0.000020717564,0.00054597965],"genre_scores_gemma":[0.99696773,0.0009484582,0.0010609956,0.000043750613,0.000016225516,0.000028337528,0.00019183359,0.000007354975,0.00073531835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991214,0.00002078322,0.000009022219,0.000013336292,0.000017372831,0.000027212547],"domain_scores_gemma":[0.99991953,0.000008428275,0.000033763645,0.0000056472413,0.000009842156,0.000022764418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014172927,0.00033721954,0.00014350037,0.00014172224,0.00013278301,0.00014034449,0.00012569573,0.00021972763,0.0012688756],"category_scores_gemma":[0.000102226906,0.00009537752,0.00015371767,0.00006239227,0.00023011805,0.00012926756,0.00018573845,0.00048304998,0.00030191662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000798313,0.000056953515,0.0022144697,0.000060741462,0.0000047069625,0.00010134324,0.000019569112,0.000027481416,0.9943363,0.00008357115,0.0000780339,0.0022183657],"study_design_scores_gemma":[0.00024302323,0.0017471145,0.14001574,0.00007007852,0.000119036384,0.0024921785,0.00019856574,0.0018121297,0.84578747,0.00028902912,0.0072129155,0.000012786733],"about_ca_topic_score_codex":0.00020849967,"about_ca_topic_score_gemma":0.00020345005,"teacher_disagreement_score":0.0012688756,"about_ca_system_score_codex":0.00020665879,"about_ca_system_score_gemma":0.00011840696,"threshold_uncertainty_score":0.004244745},"labels":[],"label_agreement":null},{"id":"W2100968482","doi":"10.1186/1476-9255-9-31","title":"Doxycycline impairs neutrophil migration to the airspaces of the lung in mice exposed to intratracheal lipopolysaccharide","year":2012,"lang":"en","type":"article","venue":"Journal of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Bronchoalveolar lavage; Doxycycline; Medicine; Immunology; Lipopolysaccharide; Lung; Tetracycline; Antibiotics; Biology; Microbiology; Internal medicine","score_opus":0.008387242862459869,"score_gpt":0.24106970042959525,"score_spread":0.23268245756713538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100968482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941791,0.0023946657,0.0014607277,0.0002449864,0.000072795636,0.000053930795,0.00048299087,0.00013752327,0.0009732354],"genre_scores_gemma":[0.99263483,0.0013117443,0.0018266758,0.00015361563,0.00002517742,0.00012233602,0.00046376136,0.000024218709,0.0034376585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997229,0.000040879262,0.00003865343,0.00005644282,0.00006341269,0.00007776024],"domain_scores_gemma":[0.99966216,0.000037502054,0.000121409255,0.000028020962,0.000027861377,0.00012300168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020869238,0.000522413,0.00043801888,0.00036793682,0.00012912552,0.00027778084,0.00026020926,0.0005601718,0.0014295466],"category_scores_gemma":[0.00016223566,0.0001681739,0.00023394749,0.00014968589,0.00035260463,0.00028137604,0.00019141396,0.0011567869,0.00028855584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066082476,0.0001694065,0.00028228346,0.00007080229,0.0000057750312,0.000045742352,0.00001620522,0.000042698815,0.9974618,0.000023173005,0.00004740358,0.0011737418],"study_design_scores_gemma":[0.000111959176,0.0024835318,0.0115920575,0.000029578203,0.000029831628,0.00017506808,0.000059381055,0.00094874005,0.9834114,0.000038556507,0.001112368,0.0000075731346],"about_ca_topic_score_codex":0.00057365815,"about_ca_topic_score_gemma":0.0012752666,"teacher_disagreement_score":0.0014295466,"about_ca_system_score_codex":0.00034719997,"about_ca_system_score_gemma":0.00033982412,"threshold_uncertainty_score":0.004782319},"labels":[],"label_agreement":null},{"id":"W2101205453","doi":"10.1096/fj.06-7457com","title":"The Toll‐like receptor 7/8‐ligand resiquimod (R‐848) primes human neutrophils for leukotriene B <sub>4</sub> , prostaglandin E <sub>2</sub> and platelet‐activating factor biosynthesis","year":2007,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Bundesministerium für Bildung und Forschung","keywords":"TLR7; Arachidonic acid; Lipid signaling; Platelet-activating factor; Toll-like receptor; Phospholipase A2; Innate immune system; Chemistry; Cell biology; Platelet activation; Leukotriene B4; Biology; Receptor; Biochemistry; Platelet; Inflammation; Immunology","score_opus":0.013683903613652978,"score_gpt":0.23637112301447558,"score_spread":0.2226872194008226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101205453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99395955,0.0023036082,0.0019281319,0.00010796058,0.000054846434,0.00007173894,0.00021889171,0.00007752362,0.0012777981],"genre_scores_gemma":[0.9951788,0.0007659634,0.0021825542,0.00007225717,0.000037002585,0.00007030467,0.0004631271,0.0000098566015,0.0012202088],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998721,0.000038195216,0.000011227757,0.000022505776,0.000022724058,0.00003323874],"domain_scores_gemma":[0.99995184,0.000014173838,0.000013848539,0.000008426924,0.0000049823416,0.0000067503074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010220654,0.00042986835,0.00026610086,0.00010177084,0.00010663864,0.0001559666,0.00013150081,0.00027001437,0.0013103244],"category_scores_gemma":[0.00011666954,0.00012338292,0.00021419325,0.00006223111,0.00013835312,0.00015355156,0.00014140138,0.0003041348,0.00076207926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034189675,0.00006161303,0.0002015989,0.000047620626,0.000005378288,0.00008866186,0.00001280293,0.00010708521,0.99626875,0.000049297145,0.000095062525,0.0027201527],"study_design_scores_gemma":[0.00007391114,0.0017458234,0.0039659967,0.000008333279,0.000020601356,0.0006823132,0.000022482951,0.00090672896,0.9893567,0.000057548063,0.0031531244,0.0000062919203],"about_ca_topic_score_codex":0.00014275627,"about_ca_topic_score_gemma":0.00016365653,"teacher_disagreement_score":0.0013103244,"about_ca_system_score_codex":0.00018117367,"about_ca_system_score_gemma":0.0001326333,"threshold_uncertainty_score":0.004383445},"labels":[],"label_agreement":null},{"id":"W2101274502","doi":"10.4049/jimmunol.1201940","title":"Inhibitory Receptor Paired Ig-like Receptor B Is Exploited by <i>Staphylococcus aureus</i> for Virulence","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Lipoteichoic acid; Microbiology; Innate immune system; Virulence; Biology; Staphylococcus aureus; Immune system; Pattern recognition receptor; Receptor; Inflammasome; Bacteria; Inflammation; Immunology; Gene","score_opus":0.01257640459110575,"score_gpt":0.22789467896122628,"score_spread":0.21531827437012052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101274502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942058,0.0013219451,0.0021433001,0.00012499065,0.00002467976,0.000012033255,0.00010422306,0.000083601306,0.0019796072],"genre_scores_gemma":[0.99714833,0.0004394068,0.0012985632,0.000088611676,0.000014321494,0.000008000365,0.00018881248,0.000016499635,0.0007974599],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982494,0.000037596765,0.000013807907,0.000027394179,0.000045419732,0.000050891125],"domain_scores_gemma":[0.99987173,0.000010525389,0.000053974272,0.000013760728,0.000008376445,0.000041620548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013937043,0.0004237791,0.0002259612,0.00015136981,0.00009786311,0.0003370561,0.00016524419,0.00029077978,0.0015613515],"category_scores_gemma":[0.0001894208,0.00015693686,0.00026406383,0.00007209205,0.00025331305,0.0001759827,0.0003210975,0.0005092684,0.0007423583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011882659,0.00001255536,0.0003467962,0.000015134995,0.0000024160672,0.00008410468,0.000002784791,0.000020587106,0.9986356,0.00006869551,0.000022110933,0.0006704128],"study_design_scores_gemma":[0.00004893035,0.0009792204,0.017521195,0.000018362078,0.000034605968,0.0037680154,0.00006299267,0.0017232273,0.97268254,0.00026466788,0.0028872956,0.00000893358],"about_ca_topic_score_codex":0.00020485076,"about_ca_topic_score_gemma":0.00012531721,"teacher_disagreement_score":0.0015613515,"about_ca_system_score_codex":0.00015389133,"about_ca_system_score_gemma":0.00016774517,"threshold_uncertainty_score":0.0052232146},"labels":[],"label_agreement":null},{"id":"W2101649073","doi":"10.4049/jimmunol.1003414","title":"CpG and Non-CpG Oligodeoxynucleotides Directly Costimulate Mouse and Human CD4+ T Cells through a TLR9- and MyD88-Independent Mechanism","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; U.S. Public Health Service; National Institutes of Health; National Science Foundation","keywords":"TLR9; CpG Oligodeoxynucleotide; CD28; Cell biology; T-cell receptor; Biology; Cytokine; Jurkat cells; T cell; Downregulation and upregulation; CpG site; Secretion; Phosphorylation; Immunology; Immune system; Biochemistry; Gene; Gene expression","score_opus":0.014485254051950364,"score_gpt":0.22398230119587756,"score_spread":0.2094970471439272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101649073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98610944,0.0033306305,0.0069155362,0.000109905144,0.00009468661,0.00020055674,0.00039969163,0.000046502602,0.002793097],"genre_scores_gemma":[0.984189,0.0019374837,0.010786977,0.0001724497,0.000039361785,0.00019184145,0.000607743,0.000018308388,0.0020569367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998036,0.00005891554,0.000014828246,0.000032321033,0.00004701351,0.00004349167],"domain_scores_gemma":[0.9999293,0.000024248948,0.000014431705,0.000008206665,0.0000069902126,0.00001675054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017690515,0.00048082217,0.00020280298,0.00015782315,0.00007660765,0.00016084599,0.0001252436,0.0003004608,0.0013463259],"category_scores_gemma":[0.0001401439,0.00011659546,0.00016489177,0.00013505341,0.00016573083,0.00011738876,0.00017000528,0.00055019977,0.00030098547],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001881462,0.000062016225,0.00009481377,0.00007235484,0.000005831196,0.000020977068,0.0000066905,0.00009570935,0.99720937,0.000090175956,0.000030941872,0.002122934],"study_design_scores_gemma":[0.000038314003,0.0011919177,0.0008736546,0.000007642803,0.000018341756,0.0001541884,0.000011015885,0.00035613045,0.99556184,0.00006685886,0.001717827,0.0000021995345],"about_ca_topic_score_codex":0.0001534658,"about_ca_topic_score_gemma":0.00047212417,"teacher_disagreement_score":0.0013463259,"about_ca_system_score_codex":0.00015241244,"about_ca_system_score_gemma":0.00019860755,"threshold_uncertainty_score":0.004503906},"labels":[],"label_agreement":null},{"id":"W2101907793","doi":"10.1084/jem.20060375","title":"Vascular endothelial growth factor is an important determinant of sepsis morbidity and mortality","year":2006,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":281,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"National Institute of Mental Health; National Heart, Lung, and Blood Institute","keywords":"Sepsis; Immunology; Pathophysiology; Vascular endothelial growth factor; Medicine; Biology; Internal medicine; VEGF receptors","score_opus":0.021445775808453905,"score_gpt":0.2911139653800529,"score_spread":0.269668189571599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2101907793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9250377,0.06111362,0.0028578164,0.002878521,0.0002963583,0.000030376967,0.0009280812,0.0001498497,0.0067076664],"genre_scores_gemma":[0.9895399,0.007925152,0.0005192583,0.00019463009,0.00023185284,0.000016676362,0.00035841146,0.00000787683,0.0012062663],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995945,0.00014298291,0.00003258279,0.000038738242,0.00013797756,0.000053316675],"domain_scores_gemma":[0.99910706,0.00016597201,0.00032116636,0.000028636086,0.00014543992,0.0002316986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038252486,0.00027952893,0.0003902492,0.0003364944,0.00013144639,0.00039222118,0.000112100504,0.0003476665,0.0014946635],"category_scores_gemma":[0.001313463,0.00007753914,0.00011622947,0.00033151245,0.00016230761,0.00015149167,0.00023738958,0.00057508814,0.00044231268],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030301332,0.00053898344,0.75569344,0.0004994575,0.00047985525,0.0016164647,0.00010361867,0.0008388296,0.08201002,0.00076202455,0.007130378,0.14729685],"study_design_scores_gemma":[0.000036444275,0.00090493436,0.9750708,0.0000759774,0.00017173005,0.0034361393,0.000089854955,0.0013273505,0.008554615,0.00047110164,0.009840537,0.000020560052],"about_ca_topic_score_codex":0.00034361435,"about_ca_topic_score_gemma":0.00023584512,"teacher_disagreement_score":0.0014946635,"about_ca_system_score_codex":0.00018996195,"about_ca_system_score_gemma":0.00030944802,"threshold_uncertainty_score":0.005000174},"labels":[],"label_agreement":null},{"id":"W2102069697","doi":"10.1111/j.1469-7793.2003.00929.x","title":"Compromised neuroimmune status in rats with experimental colitis","year":2003,"lang":"en","type":"article","venue":"The Journal of Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Directorate for Biological Sciences; Alberta Heritage Foundation for Medical Research; University of Calgary","keywords":"Colitis; Lipopolysaccharide; Hypothermia; Tumor necrosis factor alpha; Circadian rhythm; Medicine; Inflammation; Internal medicine; Rectal temperature; Endocrinology; Immunology; Interleukin; Cytokine","score_opus":0.010200517307150485,"score_gpt":0.23395667439040996,"score_spread":0.22375615708325947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102069697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985839,0.00040717196,0.00037763937,0.000053043786,0.000024467961,0.00002137692,0.000111499125,0.000057699253,0.00036321327],"genre_scores_gemma":[0.99661934,0.00065567746,0.0009211574,0.00006759146,0.000019070067,0.00007074667,0.00029622493,0.00001875083,0.001331289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982375,0.000032633892,0.000013501879,0.000039931903,0.00003277296,0.000057467845],"domain_scores_gemma":[0.9993381,0.000039098373,0.00025293633,0.00007883489,0.000039427734,0.00025165555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018798841,0.00064953446,0.00047661513,0.00071696716,0.00030258947,0.0003147571,0.00018147953,0.00042288646,0.0016875787],"category_scores_gemma":[0.00036174004,0.00030326238,0.00022343681,0.00023661158,0.00081889593,0.0003506371,0.0002956356,0.0011796189,0.00032869706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007222366,0.0013481496,0.0070582265,0.000088839624,0.000036554757,0.0006420325,0.00015776383,0.00015674315,0.9767348,0.00014630663,0.00012499871,0.006283218],"study_design_scores_gemma":[0.00067734136,0.047697965,0.26203153,0.00009518558,0.00022176566,0.004039175,0.0007527204,0.0023958334,0.6771578,0.0007649234,0.004063715,0.00010205185],"about_ca_topic_score_codex":0.000582627,"about_ca_topic_score_gemma":0.0010376499,"teacher_disagreement_score":0.0016875787,"about_ca_system_score_codex":0.00032611354,"about_ca_system_score_gemma":0.00034910926,"threshold_uncertainty_score":0.0056455135},"labels":[],"label_agreement":null},{"id":"W2102347003","doi":"10.1002/jlb.67.2.240","title":"Expression of serum- and glucocorticoid-regulated kinase (<i>sgk</i>) mRNA is up-regulated by GM-CSF and other proinflammatory mediators in human granulocytes","year":2000,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Regional Cancer Foundation; University of Ottawa","funders":"","keywords":"Biology; Proinflammatory cytokine; Cycloheximide; Molecular biology; Messenger RNA; Tumor necrosis factor alpha; Endocrinology; Protein biosynthesis; Inflammation; Biochemistry; Immunology; Gene","score_opus":0.006394569345851802,"score_gpt":0.23481584652178686,"score_spread":0.22842127717593505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102347003","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931727,0.0037806241,0.0011920008,0.000087826396,0.000033758075,0.000023468518,0.00078305835,0.00006045858,0.0008660189],"genre_scores_gemma":[0.9938846,0.0014797442,0.0021335848,0.000058425223,0.000023300421,0.000026916114,0.0015057577,0.000016836833,0.0008707288],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99987185,0.000022082091,0.0000131529005,0.000032811222,0.0000221833,0.000037973183],"domain_scores_gemma":[0.9998636,0.000029487492,0.00004245235,0.000016109023,0.000020782965,0.000027575366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009962785,0.00030889,0.00022424311,0.00023699674,0.000114258604,0.00040577565,0.000063241496,0.00016956784,0.000548668],"category_scores_gemma":[0.0002045147,0.00013986435,0.00026636766,0.00019147019,0.00022941767,0.00011431887,0.00012579946,0.00021464958,0.00041891387],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002607472,0.000009747617,0.00082662085,0.000038976337,0.000003646582,0.00006623829,0.000026584446,0.0000295548,0.9973321,0.000032556727,0.000042501844,0.001330655],"study_design_scores_gemma":[0.000052502346,0.00058240583,0.06296948,0.000028084103,0.000043309872,0.0012675748,0.0000861038,0.00075731217,0.9312671,0.00012820293,0.0028052812,0.000012694983],"about_ca_topic_score_codex":0.0003956606,"about_ca_topic_score_gemma":0.0003602899,"teacher_disagreement_score":0.000548668,"about_ca_system_score_codex":0.00031413592,"about_ca_system_score_gemma":0.00015633884,"threshold_uncertainty_score":0.002279222},"labels":[],"label_agreement":null},{"id":"W2102484955","doi":"10.4049/jimmunol.0903014","title":"TLR4-Mediated Sensing of <i>Campylobacter jejuni</i> by Dendritic Cells Is Determined by Sialylation","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; Directorate for Biological Sciences; Erasmus Medisch Centrum; Universiteit Utrecht","keywords":"Campylobacter jejuni; Campylobacter; Microbiology; TLR4; Chemistry; Biology; Cell biology; Bacteria; Genetics; Signal transduction","score_opus":0.003965547926865341,"score_gpt":0.2022690305517661,"score_spread":0.19830348262490075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102484955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972518,0.0006979625,0.00069849123,0.00008606378,0.000018502094,0.000013913522,0.00010416202,0.0000150819715,0.0011138857],"genre_scores_gemma":[0.998218,0.00039869503,0.0005299379,0.000046856745,0.00000712342,0.000015376581,0.00014195088,0.00000465096,0.0006373468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985015,0.000027712558,0.000009677906,0.000028279897,0.00002435681,0.00005986598],"domain_scores_gemma":[0.9999442,0.0000056189406,0.000015937032,0.0000039719816,0.00001091957,0.000019265557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000084599335,0.00032644137,0.00016049836,0.00011594013,0.00016151006,0.0002809185,0.00011745964,0.00027127203,0.00096417964],"category_scores_gemma":[0.00012369675,0.00011325802,0.00016907381,0.000073838426,0.00030998717,0.00016251853,0.0002748946,0.00042911846,0.00032489953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001661356,0.000013968615,0.00074372423,0.000034008557,0.0000022224253,0.00005281659,0.000014612161,0.000028699538,0.9982926,0.000043618944,0.000028482225,0.00057901145],"study_design_scores_gemma":[0.000051083094,0.00035842336,0.02682233,0.000022506129,0.000028202427,0.00064099295,0.00022143865,0.0016451767,0.9670767,0.000192978,0.0029306593,0.000009494715],"about_ca_topic_score_codex":0.00055269274,"about_ca_topic_score_gemma":0.000542895,"teacher_disagreement_score":0.00096417964,"about_ca_system_score_codex":0.0003997592,"about_ca_system_score_gemma":0.00020549558,"threshold_uncertainty_score":0.003225565},"labels":[],"label_agreement":null},{"id":"W2102867860","doi":"10.1371/journal.pone.0033299","title":"Both TLR2 and TRIF Contribute to Interferon-β Production during Listeria Infection","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Irish Research Council for Science, Engineering and Technology; Irish Research Council; Institut National de la Recherche Agronomique; Institut National de la Santé et de la Recherche Médicale; Science Foundation Ireland; Howard Hughes Medical Institute","keywords":"TRIF; IRF3; TLR2; Biology; Listeria monocytogenes; Innate immune system; Microbiology; Peptidoglycan; Interferon; Immune system; Toll-like receptor; Immunology; Gene; Bacteria; Biochemistry; Genetics","score_opus":0.025723592081026175,"score_gpt":0.22393686979857233,"score_spread":0.19821327771754615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2102867860","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99430096,0.0016961189,0.0024227686,0.00011718419,0.000027987347,0.000017043623,0.00016066703,0.0000608869,0.0011963644],"genre_scores_gemma":[0.99629456,0.00065316993,0.0015538777,0.00007062905,0.000030594587,0.0000398735,0.00028433042,0.000017832752,0.0010551334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997124,0.000057567522,0.000023370245,0.00003909456,0.00004842358,0.000119214],"domain_scores_gemma":[0.9998381,0.000015751566,0.00003954524,0.000018272522,0.00003178792,0.00005644265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000330205,0.00048037714,0.00032757432,0.00025751293,0.0001723928,0.00034155202,0.00016542674,0.00039198907,0.00079546764],"category_scores_gemma":[0.00021001302,0.00022962184,0.00027483172,0.00008971851,0.00019083264,0.00027298412,0.00042460582,0.0006180415,0.00035997783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003220821,0.000014539151,0.00081304746,0.000030424273,0.0000029038838,0.00008725055,0.000022360511,0.000030788487,0.9976689,0.000042357628,0.000029579842,0.0009357766],"study_design_scores_gemma":[0.00010649361,0.0005977192,0.06562309,0.000052874995,0.00007155331,0.0018623585,0.00032210647,0.002759922,0.9244662,0.00042125664,0.0036929513,0.000023533863],"about_ca_topic_score_codex":0.00015893887,"about_ca_topic_score_gemma":0.00015759832,"teacher_disagreement_score":0.00079546764,"about_ca_system_score_codex":0.00021682834,"about_ca_system_score_gemma":0.00019453859,"threshold_uncertainty_score":0.0026610494},"labels":[],"label_agreement":null},{"id":"W2103472291","doi":"10.4141/cjas2012-034","title":"Characterization and functional significance of polymorphisms in porcine Toll-like receptor (TLR) 5 gene","year":2012,"lang":"en","type":"article","venue":"Canadian Journal of Animal Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"TLR5; Flagellin; Biology; Single-nucleotide polymorphism; Gene; Genetics; Toll-like receptor; Molecular biology; Receptor; Innate immune system; Genotype","score_opus":0.01393708461369748,"score_gpt":0.20969865806825835,"score_spread":0.19576157345456088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103472291","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99610764,0.0006768555,0.0015205427,0.00011556227,0.000040376934,0.00003690061,0.00066292856,0.0000060424313,0.00083309005],"genre_scores_gemma":[0.99733526,0.00014222626,0.0012363663,0.00011056087,0.000024817347,0.000027390617,0.0006971371,0.0000068247377,0.0004193337],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995745,0.000113619615,0.000071726674,0.00012620688,0.00006783807,0.000046139627],"domain_scores_gemma":[0.99958915,0.00015261197,0.000118994394,0.000029815457,0.000040351624,0.000068953916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039133814,0.00038175145,0.00024787083,0.00059518917,0.00021391467,0.00022722635,0.00024987065,0.000638942,0.0015188277],"category_scores_gemma":[0.00046479443,0.00017016665,0.0007335882,0.00048740188,0.00029102303,0.00013210344,0.00019402102,0.00045749493,0.00037235575],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003117784,0.00042989486,0.22238056,0.0002767837,0.00034651608,0.0065553323,0.00061833113,0.0005903801,0.74639666,0.00044566716,0.00040254107,0.018439565],"study_design_scores_gemma":[0.0002335224,0.0013870889,0.94566184,0.000071120274,0.00039574446,0.007860264,0.00033663982,0.0035481157,0.035793226,0.00037817663,0.0042664655,0.000067868226],"about_ca_topic_score_codex":0.0005877774,"about_ca_topic_score_gemma":0.0006291971,"teacher_disagreement_score":0.0015188277,"about_ca_system_score_codex":0.00013158059,"about_ca_system_score_gemma":0.0001259406,"threshold_uncertainty_score":0.0050809383},"labels":[],"label_agreement":null},{"id":"W2103727417","doi":"10.1158/1078-0432.ccr-03-0569","title":"Changes in Gene Expression Induced by Phosphorothioate Oligodeoxynucleotides (Including G3139) in PC3 Prostate Carcinoma Cells Are Recapitulated at Least in Part by Treatment with Interferon-β and -γ","year":2004,"lang":"en","type":"article","venue":"Clinical Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Immunovaccine (Canada)","funders":"","keywords":"Prostate; Gene expression; Carcinoma; Gene; Interferon; Biology; Cancer research; Medicine; Cancer; Internal medicine; Immunology; Genetics","score_opus":0.11748575378069331,"score_gpt":0.3874279057922098,"score_spread":0.2699421520115165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2103727417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947883,0.0010231322,0.0017910729,0.000059136077,0.000020744943,0.00004840656,0.001315076,0.00011982121,0.0008342423],"genre_scores_gemma":[0.9909586,0.00092760747,0.003744822,0.0000702485,0.000009038966,0.00012819235,0.0023112702,0.000025768679,0.0018244488],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978405,0.000021617265,0.000015321804,0.00006725303,0.00006132551,0.00005037331],"domain_scores_gemma":[0.9998982,0.00001663321,0.000034479377,0.0000121094945,0.000014156638,0.000024469085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101742895,0.0003772824,0.0003328879,0.00035057293,0.00023407312,0.00025471483,0.00014098536,0.00024573915,0.001195613],"category_scores_gemma":[0.00008429823,0.0001733847,0.00033599674,0.0005381054,0.00029984725,0.00011364586,0.00011543751,0.00050025433,0.00034221887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008894931,0.000010676753,0.00017469775,0.000012103886,0.000003257086,0.000012113019,0.000007550783,0.000025260271,0.99934345,0.000008346923,0.00000983339,0.0003038032],"study_design_scores_gemma":[0.000009297932,0.00035030724,0.01669428,0.0000025130316,0.000017288156,0.000081796556,0.000032151813,0.00028412364,0.9818856,0.000014649477,0.00062460813,0.0000034396246],"about_ca_topic_score_codex":0.0021966647,"about_ca_topic_score_gemma":0.0034427112,"teacher_disagreement_score":0.0021966647,"about_ca_system_score_codex":0.0003918789,"about_ca_system_score_gemma":0.0004044564,"threshold_uncertainty_score":0.0043677688},"labels":[],"label_agreement":null},{"id":"W2104442443","doi":"10.4049/jimmunol.181.5.3620","title":"Nucleotide Oligomerization Domains 1 and 2: Regulation of Expression and Function in Preadipocytes","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Deutsche Forschungsgemeinschaft","keywords":"Muramyl dipeptide; Nucleotide; Biology; Cyclic nucleotide-binding domain; Cell biology; NOD2; Small interfering RNA; Transfection; Biochemistry; Chemistry; Molecular biology; Receptor; Innate immune system; Gene; In vitro","score_opus":0.007936151554731603,"score_gpt":0.20465361031560236,"score_spread":0.19671745876087077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104442443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9943423,0.0028174315,0.0016090617,0.00004347424,0.000012676894,0.000015355465,0.0003737397,0.000026306543,0.00075957313],"genre_scores_gemma":[0.9883221,0.0021786902,0.0024989739,0.000068719855,0.000012639883,0.000059779763,0.0017058246,0.000016252234,0.005137062],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991727,0.000010033209,0.000005737297,0.000029319082,0.000016187476,0.000021455598],"domain_scores_gemma":[0.9999201,0.000015326754,0.000024868099,0.000007669997,0.000009040776,0.000022941531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008196871,0.0002779859,0.0001465317,0.00017390525,0.00013561451,0.00026817177,0.00007827149,0.00017846111,0.0009529137],"category_scores_gemma":[0.000098267745,0.00015064166,0.00016529855,0.00009985506,0.00012599539,0.0001263591,0.00012913118,0.00029601355,0.00042997344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006106591,0.0000044053327,0.00013986886,0.00001056324,7.2614654e-7,0.000021109872,0.0000070474803,0.000014648901,0.99942636,0.00002346491,0.0000061524584,0.00028458406],"study_design_scores_gemma":[0.000023746657,0.00029942492,0.056345146,0.0000120164095,0.000016640373,0.00061616674,0.0000742375,0.0010659071,0.93713015,0.000084510415,0.004321683,0.00001037013],"about_ca_topic_score_codex":0.0003821824,"about_ca_topic_score_gemma":0.00072962046,"teacher_disagreement_score":0.0009529137,"about_ca_system_score_codex":0.00029235202,"about_ca_system_score_gemma":0.00014629214,"threshold_uncertainty_score":0.0031877756},"labels":[],"label_agreement":null},{"id":"W2104868556","doi":"10.1177/1091581809347388","title":"Safety Evaluation of Calcium Administered Intranasally to Mice","year":2009,"lang":"en","type":"article","venue":"International Journal of Toxicology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Nasal administration; Calcium; Histopathology; Toxicity; Medicine; Pharmacology; Immune system; Inflammation; Immunology; Physiology; Internal medicine; Pathology","score_opus":0.0328068797575845,"score_gpt":0.3468024012200365,"score_spread":0.313995521462452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104868556","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985989,0.0034037835,0.0058357967,0.00030043055,0.00014169561,0.0005252647,0.0009455513,0.0002319956,0.002626573],"genre_scores_gemma":[0.97666943,0.00483128,0.00776987,0.0003260663,0.00011966745,0.0007099666,0.0013262188,0.0000755263,0.008171919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993461,0.0001389858,0.000037635138,0.00014777997,0.00024422258,0.00008528129],"domain_scores_gemma":[0.99932504,0.000107563275,0.00023331855,0.00009099286,0.00016858662,0.00007442822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007806575,0.0006121901,0.00073257735,0.00055580406,0.00035442147,0.00045561072,0.0005127953,0.00102325,0.0015188999],"category_scores_gemma":[0.0005514191,0.00019561592,0.000576465,0.00026997263,0.00047324513,0.00037660843,0.00016602976,0.0009965141,0.00045985726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028016581,0.0008147158,0.0009441869,0.00020160784,0.00004096439,0.0001097624,0.00007971232,0.00029200327,0.9837801,0.00012393613,0.0003286652,0.010482804],"study_design_scores_gemma":[0.0003748014,0.027255997,0.0031244205,0.00006029337,0.00014944855,0.00038976676,0.000086038905,0.0010007743,0.96104443,0.00011655815,0.006374323,0.000023124285],"about_ca_topic_score_codex":0.0008276697,"about_ca_topic_score_gemma":0.001133954,"teacher_disagreement_score":0.0015188999,"about_ca_system_score_codex":0.00042164544,"about_ca_system_score_gemma":0.00060219655,"threshold_uncertainty_score":0.0050812364},"labels":[],"label_agreement":null},{"id":"W2104876332","doi":"10.1093/molbev/msr137","title":"Evolution of the TIR Domain-Containing Adaptors in Humans: Swinging between Constraint and Adaptation","year":2011,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Agence Nationale de la Recherche","keywords":"Biology; TRIF; Signal transducing adaptor protein; Innate immune system; Receptor; Toll-like receptor; Population; Genetics; Cell biology","score_opus":0.014396305466745248,"score_gpt":0.22603660004035797,"score_spread":0.21164029457361272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104876332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99533325,0.001821546,0.0017360755,0.00012473491,0.0000048920806,0.000005953812,0.00012513202,0.000015219201,0.0008331457],"genre_scores_gemma":[0.99741745,0.0007754977,0.0012835502,0.00009180641,0.000014200479,0.000006952673,0.00011619094,0.000009006536,0.0002854052],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979657,0.000046273497,0.000013984857,0.00009547259,0.000027533944,0.000020250376],"domain_scores_gemma":[0.9998092,0.000045014753,0.00008119797,0.000019911953,0.000023018973,0.000021664802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030856658,0.00013912174,0.00016896438,0.0004055483,0.00023575225,0.00029923324,0.00016399301,0.00040343788,0.00084214145],"category_scores_gemma":[0.0005569158,0.000104710896,0.0001562701,0.0005175151,0.0005169181,0.0002256703,0.00030062898,0.00027471804,0.00012691421],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009948909,0.00008749223,0.47131866,0.00024074469,0.00034647435,0.0022027672,0.0016867664,0.0022846567,0.40372905,0.003998675,0.0005773705,0.11253245],"study_design_scores_gemma":[0.00003011568,0.00031623678,0.96524173,0.00004623169,0.00010056738,0.0077317483,0.0005700647,0.0017069109,0.012200197,0.0030163585,0.008990007,0.000049894068],"about_ca_topic_score_codex":0.00047906768,"about_ca_topic_score_gemma":0.00053675426,"teacher_disagreement_score":0.00084214145,"about_ca_system_score_codex":0.00018358631,"about_ca_system_score_gemma":0.00012893038,"threshold_uncertainty_score":0.0028172731},"labels":[],"label_agreement":null},{"id":"W2104957057","doi":"10.4049/jimmunol.171.11.6065","title":"IL-1R-Associated Kinase 4 Is Required for Lipopolysaccharide- Induced Activation of APC","year":2003,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Cell biology; Lipopolysaccharide; Signal transduction; Immune system; Innate immune system; Cytokine; Biology; Kinase; Stimulation; Immunology; Endocrinology","score_opus":0.022204971120799447,"score_gpt":0.2582160907812853,"score_spread":0.23601111966048588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2104957057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932787,0.001454323,0.0029027353,0.00018111413,0.00006233545,0.00002408748,0.00058837625,0.00014732943,0.0013609265],"genre_scores_gemma":[0.9921933,0.0005882837,0.002694888,0.000048093527,0.000016066631,0.000044506865,0.0017556661,0.00004739548,0.002611844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997689,0.000046450707,0.000025809737,0.000033676177,0.000057426998,0.00006767451],"domain_scores_gemma":[0.9995778,0.000060463462,0.00015452038,0.00006918868,0.000046357618,0.000091682145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017647722,0.0006355812,0.00031766805,0.00029469433,0.00022623927,0.00047673375,0.00038868273,0.00032410538,0.0023468046],"category_scores_gemma":[0.00041376433,0.0002690848,0.00028522545,0.00012664076,0.00033846794,0.00034370428,0.0003556513,0.0008354923,0.0015350239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029711015,0.00003877795,0.00041866832,0.000038960254,0.000006044105,0.0001209386,0.000006307199,0.00010088333,0.99808395,0.00012404613,0.000048634087,0.00071564765],"study_design_scores_gemma":[0.000075534736,0.0002159265,0.01347589,0.000015110332,0.00003554654,0.0010305895,0.00004416196,0.0022378976,0.97840536,0.00027451463,0.0041790134,0.000010429853],"about_ca_topic_score_codex":0.0003806634,"about_ca_topic_score_gemma":0.00033768683,"teacher_disagreement_score":0.0023468046,"about_ca_system_score_codex":0.00056470215,"about_ca_system_score_gemma":0.0004470486,"threshold_uncertainty_score":0.007850885},"labels":[],"label_agreement":null},{"id":"W2105506714","doi":"10.4049/jimmunol.1203310","title":"A TNF-α–CCL20–CCR6 Axis Regulates Nod1-Induced B Cell Responses","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University","funders":"Canadian Institutes of Health Research; University of Toronto","keywords":"NOD1; Lymphotoxin; Inflammation; CCL20; Chemokine; Innate immune system; Cell biology; C-C chemokine receptor type 6; Immunology; CCL21; Tumor necrosis factor alpha; Spleen; Immune system; Biology; CXCL13; Chemokine receptor; NOD2","score_opus":0.010356656002044516,"score_gpt":0.2254298652657285,"score_spread":0.21507320926368398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105506714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987608,0.005203201,0.0027074625,0.0002298654,0.00006732306,0.00004440918,0.00065862405,0.00022591653,0.003255141],"genre_scores_gemma":[0.99460524,0.0012969095,0.0012284082,0.00006580411,0.000022550355,0.000027125461,0.0005220588,0.00002766442,0.002204229],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997739,0.000040172075,0.000016199963,0.000039635237,0.000035602636,0.00009439759],"domain_scores_gemma":[0.99983644,0.000008383838,0.00004084423,0.0000093883955,0.00002211077,0.00008274717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016949429,0.00030062438,0.00019014136,0.0003133633,0.0002211725,0.00042601253,0.00015810074,0.00024303883,0.0017674943],"category_scores_gemma":[0.000117024414,0.0001188504,0.00020672145,0.00012738074,0.00021779099,0.00023443336,0.00023810429,0.00057142595,0.0007197476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017963747,0.00003073994,0.0006221227,0.00004326506,0.000002833772,0.000095596086,0.000018420313,0.00005467474,0.9974381,0.00013589716,0.000112688394,0.0012659703],"study_design_scores_gemma":[0.00015606456,0.000722133,0.07365396,0.00005306149,0.000043361542,0.0012651499,0.00025891405,0.005010168,0.9068196,0.00028332742,0.011706467,0.00002775419],"about_ca_topic_score_codex":0.0006114994,"about_ca_topic_score_gemma":0.00077027595,"teacher_disagreement_score":0.0017674943,"about_ca_system_score_codex":0.00027221482,"about_ca_system_score_gemma":0.00019382781,"threshold_uncertainty_score":0.0059128404},"labels":[],"label_agreement":null},{"id":"W2105542546","doi":"10.3748/wjg.v20.i47.17699","title":"Toll-like receptor signaling in colorectal cancer: Carcinogenesis to cancer therapy","year":2014,"lang":"en","type":"review","venue":"World Journal of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institutes of Health; Gary Bennett Family Fund","keywords":"TLR3; Toll-like receptor; Innate immune system; Biology; Signal transduction; Inflammation; Cancer research; Immune system; Carcinogenesis; TLR4; Cancer; Cell biology; Immunology; Pattern recognition receptor; TLR5","score_opus":0.023330505545657045,"score_gpt":0.30545807088168847,"score_spread":0.28212756533603145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105542546","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017992757,0.96855706,0.00069033436,0.020194585,0.0025466,0.000016698039,0.000058734066,0.00006972821,0.006066921],"genre_scores_gemma":[0.036201373,0.9341225,0.0012711025,0.010842388,0.0057185814,0.000041076164,0.00019347471,0.000021085962,0.011588441],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99980086,0.0000632613,0.00001803807,0.000027247246,0.000053127173,0.000037536138],"domain_scores_gemma":[0.9997193,0.00004789035,0.00005419643,0.000012220804,0.000078537276,0.00008776695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042408018,0.00041433467,0.00046358068,0.00070943777,0.00022396214,0.0006797603,0.00033838567,0.0012110058,0.0044711893],"category_scores_gemma":[0.000630582,0.000094518655,0.00028036357,0.0007442559,0.0004360774,0.00080738513,0.0006206195,0.0017344796,0.0017309462],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039494658,0.00017038075,0.0014645965,0.0050494163,0.000080656275,0.00064414844,0.00010898317,0.00050560536,0.0045689684,0.015595885,0.16861986,0.80279654],"study_design_scores_gemma":[0.00010288395,0.0004794,0.0033833582,0.0024603764,0.0000697969,0.0027967237,0.00012396013,0.00044465557,0.0013822747,0.006279649,0.9824431,0.000033917237],"about_ca_topic_score_codex":0.00063504715,"about_ca_topic_score_gemma":0.0014989446,"teacher_disagreement_score":0.0044711893,"about_ca_system_score_codex":0.0007901863,"about_ca_system_score_gemma":0.0007634145,"threshold_uncertainty_score":0.014957607},"labels":[],"label_agreement":null},{"id":"W2105582142","doi":"10.4049/jimmunol.169.6.3370","title":"Endotoxemia Prevents the Cerebral Inflammatory Wave Induced by Intraparenchymal Lipopolysaccharide Injection: Role of Glucocorticoids and CD14","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research; University of Illinois at Urbana-Champaign","keywords":"CD14; Lipopolysaccharide; Neuroinflammation; Inflammation; Innate immune system; Microglia; Endocrinology; Immune system; Monocyte; Internal medicine; Systemic administration; Systemic inflammation; Receptor; Tumor necrosis factor alpha; Medicine; Immunology; Biology","score_opus":0.009109168438404331,"score_gpt":0.19994499572454197,"score_spread":0.19083582728613763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105582142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955883,0.0019884608,0.001247335,0.00014313872,0.000041976724,0.000032613534,0.00011315863,0.00009644226,0.00074857374],"genre_scores_gemma":[0.9937354,0.0014241354,0.0018467201,0.000089944886,0.00005702341,0.00007437361,0.00027585254,0.00002353809,0.0024730717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998894,0.000015952794,0.0000104757755,0.000019245183,0.000024698345,0.00004024927],"domain_scores_gemma":[0.9997726,0.0000138886935,0.000079290825,0.000023676599,0.000023504737,0.000087069486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012254527,0.000413887,0.00036005297,0.00018986309,0.0001127691,0.0002453978,0.0001967026,0.00024641768,0.0011218175],"category_scores_gemma":[0.00019644825,0.00010913632,0.00018971942,0.00010155388,0.00035492022,0.00023846529,0.00017175569,0.0007324514,0.00024471065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002644998,0.0002371032,0.00038103538,0.00008592519,0.000012943216,0.000098978635,0.00003360043,0.00004289989,0.9899018,0.000102026825,0.00006391004,0.0063947607],"study_design_scores_gemma":[0.0002737599,0.0038151187,0.014105526,0.00003185642,0.00005786994,0.0002712769,0.00009177331,0.00059267913,0.97818995,0.00011247926,0.002443853,0.000013814374],"about_ca_topic_score_codex":0.00040208467,"about_ca_topic_score_gemma":0.0007980467,"teacher_disagreement_score":0.0011218175,"about_ca_system_score_codex":0.00014036804,"about_ca_system_score_gemma":0.00035203496,"threshold_uncertainty_score":0.0037528872},"labels":[],"label_agreement":null},{"id":"W2105620133","doi":"10.4049/jimmunol.172.1.45","title":"Essential Role for Neutrophil Recruitment to the Liver in Concanavalin A-Induced Hepatitis","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":186,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Health Canada; Canadian Association of Gastroenterology","keywords":"Liver injury; Lymphocyte; Intravital microscopy; Hepatitis; Hepatocyte; Concanavalin A; Immunology; Inflammation; Liver disease; Infiltration (HVAC); Flow cytometry; Alanine transaminase; Medicine; Biology; Internal medicine; In vitro; Biochemistry; Microcirculation","score_opus":0.023272091002081774,"score_gpt":0.26629215089686903,"score_spread":0.24302005989478725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105620133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919699,0.0038906825,0.0024957876,0.00015934644,0.000036286903,0.00006568197,0.00012358738,0.00008018519,0.0011784689],"genre_scores_gemma":[0.9966875,0.00095660717,0.0010721878,0.00004572471,0.000017014563,0.00006697858,0.000080270736,0.0000043114755,0.0010694357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999848,0.000072791336,0.000016496488,0.000013990993,0.000020137615,0.000028563407],"domain_scores_gemma":[0.9998629,0.000028867258,0.00004388118,0.000015706415,0.000017821565,0.000030778545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002569364,0.00023987638,0.00018310206,0.00017696606,0.0001385056,0.00017146213,0.00011174448,0.00025436003,0.0008520433],"category_scores_gemma":[0.00021799811,0.00009953563,0.00011574726,0.000060967268,0.00018394884,0.00015243105,0.00019553221,0.00026764686,0.000201738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096732273,0.000079124475,0.0013494621,0.00009227872,0.0000036019042,0.00042739706,0.00003831212,0.00006665122,0.993002,0.00023345038,0.00009512991,0.0036452822],"study_design_scores_gemma":[0.00015276263,0.0021321443,0.07930965,0.00007166206,0.000044787274,0.0024838173,0.00021204902,0.0039533097,0.9042191,0.00047096895,0.006935112,0.000014717196],"about_ca_topic_score_codex":0.0003349916,"about_ca_topic_score_gemma":0.00040826804,"teacher_disagreement_score":0.0008520433,"about_ca_system_score_codex":0.00022174999,"about_ca_system_score_gemma":0.00021880004,"threshold_uncertainty_score":0.0028504133},"labels":[],"label_agreement":null},{"id":"W2105664859","doi":"10.4049/jimmunol.1001034","title":"MyD88-Dependent SHIP1 Regulates Proinflammatory Signaling Pathways in Dendritic Cells after Monophosphoryl Lipid A Stimulation of TLR4","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; American Heart Association; W. M. Keck Foundation","keywords":"TRIF; Proinflammatory cytokine; TLR4; Signal transduction; Cell biology; Signal transducing adaptor protein; Lipid A; Toll-like receptor; Biology; Chemistry; Immunology; Inflammation; Lipopolysaccharide; Immune system; Innate immune system","score_opus":0.014313548371212934,"score_gpt":0.20153175537105827,"score_spread":0.18721820699984534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105664859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99784863,0.0006013895,0.00068891014,0.000065244894,0.000012935198,0.000017549726,0.0002389622,0.000014720988,0.00051169784],"genre_scores_gemma":[0.996042,0.0005046626,0.0010257438,0.000052609896,0.0000110113015,0.000057318055,0.00062636216,0.000008784519,0.0016714297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984705,0.000031637803,0.000015118062,0.000027233491,0.00002752772,0.00005136493],"domain_scores_gemma":[0.99987245,0.000011017675,0.00004816372,0.000012757115,0.000016653352,0.000038926395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001557863,0.0002959275,0.00020330948,0.00017969769,0.00017410933,0.00022584079,0.0001268733,0.0002152936,0.0013033263],"category_scores_gemma":[0.00011787884,0.00014064377,0.00028332393,0.00011949051,0.00022075008,0.00019267047,0.00027738546,0.0006728666,0.0005398783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017610831,0.000018328974,0.00020393182,0.000024516283,0.0000018527502,0.000033283686,0.000009994825,0.000016764012,0.999241,0.00002595275,0.000012539569,0.0002357255],"study_design_scores_gemma":[0.000041848332,0.00028430118,0.017829705,0.000007671287,0.000013693127,0.00021995947,0.00007568669,0.0008875123,0.9794755,0.00005785113,0.0011016732,0.0000047262783],"about_ca_topic_score_codex":0.00018792711,"about_ca_topic_score_gemma":0.0002842089,"teacher_disagreement_score":0.0013033263,"about_ca_system_score_codex":0.0002476247,"about_ca_system_score_gemma":0.00018848502,"threshold_uncertainty_score":0.00436002},"labels":[],"label_agreement":null},{"id":"W2105910778","doi":"10.1164/rccm.200906-0925oc","title":"Activating Transcription Factor 3 Confers Protection against Ventilator-induced Lung Injury","year":2010,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; St. Michael's Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"ATF3; Proinflammatory cytokine; Activating transcription factor; Medicine; Bronchoalveolar lavage; Lung; Inflammation; Transcription factor; Pulmonary edema; Mechanical ventilation; In vivo; Immunology; Respiratory distress; Gene expression; Biology; Gene; Anesthesia; Promoter; Internal medicine; Genetics","score_opus":0.01750419232745371,"score_gpt":0.29346320766505163,"score_spread":0.2759590153375979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2105910778","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955799,0.0012073123,0.0016136947,0.0001956107,0.000060744394,0.00002487395,0.00045600525,0.000115497416,0.0007462875],"genre_scores_gemma":[0.9961591,0.0006626619,0.0012704666,0.000103679995,0.000023704008,0.000036704627,0.0009055113,0.00001896447,0.0008190976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999237,0.000013323581,0.000006860223,0.000014985877,0.000016501026,0.000024602783],"domain_scores_gemma":[0.9997769,0.000031838277,0.00007267518,0.00002013488,0.000015229509,0.00008315359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015040884,0.00038278606,0.0002949034,0.00026168633,0.00013066111,0.00018317174,0.00025046695,0.00034764296,0.0032407625],"category_scores_gemma":[0.00020514982,0.0000917801,0.0003008566,0.00015917608,0.00025572564,0.00014826805,0.0002028196,0.00065030996,0.00038757626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020210932,0.00017409482,0.0015279695,0.00010245044,0.000021040147,0.000118813536,0.000011559656,0.000072419134,0.9919125,0.00008535257,0.0001328863,0.003819754],"study_design_scores_gemma":[0.00048306322,0.008878459,0.065556884,0.00007310378,0.00020603051,0.0041423636,0.00010239012,0.002124473,0.9113058,0.0005116665,0.0065904963,0.000025210653],"about_ca_topic_score_codex":0.00018460018,"about_ca_topic_score_gemma":0.00021179931,"teacher_disagreement_score":0.0032407625,"about_ca_system_score_codex":0.00015401933,"about_ca_system_score_gemma":0.00019306951,"threshold_uncertainty_score":0.010841429},"labels":[],"label_agreement":null},{"id":"W2106229108","doi":"10.1002/eji.201444874","title":"Heterodimer‐specific TLR2 stimulation results in divergent functional outcomes in B‐cell precursor acute lymphoblastic leukemia","year":2015,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; European Hematology Association","keywords":"TLR2; Biology; Downregulation and upregulation; Stimulation; Cell biology; Cancer research; Signal transduction; Immunology; Biochemistry; Neuroscience","score_opus":0.024104405876133807,"score_gpt":0.22950533584661226,"score_spread":0.20540092997047846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106229108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997528,0.00048582646,0.0006423107,0.000024975443,0.000010369912,0.000021908974,0.0002719432,0.000028137074,0.0009866136],"genre_scores_gemma":[0.9970868,0.00049828977,0.0006058012,0.000046461613,0.000007110545,0.00006649577,0.00079632126,0.000011826538,0.00088093977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996933,0.000099118144,0.0000373882,0.00003651357,0.00005460768,0.000079135345],"domain_scores_gemma":[0.99990416,0.000020026744,0.000016114516,0.00001631819,0.000009892556,0.00003355493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021432647,0.00026325512,0.00025969348,0.00028539356,0.00015413438,0.0003324375,0.00011241876,0.00022053737,0.0015085378],"category_scores_gemma":[0.0001844976,0.00013699416,0.00022549371,0.00020683187,0.00013365583,0.00021243517,0.0002520896,0.00070743466,0.0005530087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037272493,0.00007722357,0.00066750805,0.000037630205,0.000006007904,0.00006353214,0.000023908517,0.000055587592,0.99754226,0.000057945006,0.000050085568,0.0010455956],"study_design_scores_gemma":[0.00010743647,0.0024732454,0.02698393,0.000011007119,0.00005540359,0.0017403398,0.00027640097,0.0011902418,0.96283317,0.00016360138,0.0041534533,0.0000117854215],"about_ca_topic_score_codex":0.00012911936,"about_ca_topic_score_gemma":0.00016778083,"teacher_disagreement_score":0.0015085378,"about_ca_system_score_codex":0.00014210357,"about_ca_system_score_gemma":0.00010156899,"threshold_uncertainty_score":0.0050465465},"labels":[],"label_agreement":null},{"id":"W2106332058","doi":"10.1073/pnas.0806585105","title":"Beyond tumor necrosis factor receptor: TRADD signaling in toll-like receptors","year":2008,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Toronto Western Hospital; University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"TRADD; Tumor necrosis factor receptor 1; TRIF; Tumor necrosis factor alpha; Cell biology; Death domain; Signal transduction; Signal transducing adaptor protein; TLR4; Toll-like receptor; FADD; Biology; Cancer research; Immunology; Immune system; Innate immune system; Apoptosis; Caspase; Programmed cell death; Tumor necrosis factor receptor; Biochemistry","score_opus":0.03398639263196041,"score_gpt":0.26760430843389243,"score_spread":0.23361791580193203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106332058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76363593,0.15858935,0.036131658,0.0077419663,0.0015370277,0.000051378694,0.00074727624,0.0007009133,0.030864585],"genre_scores_gemma":[0.9742042,0.013597501,0.003061303,0.0004487672,0.00019671506,0.000010303426,0.0002565374,0.000016577926,0.0082081435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987173,0.00003000573,0.000011225836,0.000026302223,0.00002715488,0.000033525277],"domain_scores_gemma":[0.9999124,0.000011723578,0.000024972522,0.000016359521,0.000012334068,0.000022234759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029426417,0.00036145892,0.0002362779,0.00015942732,0.0002755517,0.0008790604,0.00026913124,0.00063323526,0.001818839],"category_scores_gemma":[0.00019378123,0.00011696294,0.0002665521,0.0001868891,0.00054011686,0.00094987935,0.00032961022,0.00045466685,0.0009354165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013628122,0.0001494676,0.0018135245,0.0011253097,0.00003208685,0.0027718928,0.0002591685,0.0016418224,0.89445305,0.04350224,0.0028667524,0.050021946],"study_design_scores_gemma":[0.00035191514,0.0015235122,0.013497886,0.00042929238,0.00014795276,0.013124508,0.00057943916,0.0066651013,0.6886562,0.06433481,0.21059853,0.000090881105],"about_ca_topic_score_codex":0.00013450439,"about_ca_topic_score_gemma":0.00014804259,"teacher_disagreement_score":0.001818839,"about_ca_system_score_codex":0.0005962254,"about_ca_system_score_gemma":0.00030968705,"threshold_uncertainty_score":0.006084621},"labels":[],"label_agreement":null},{"id":"W2106654764","doi":"10.4049/jimmunol.181.6.4229","title":"PIR-B-Deficient Mice Are Susceptible to <i>Salmonella</i> Infection","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Salmonella; Salmonella infection; Microbiology; Biology; Virology; Genetics; Bacteria","score_opus":0.01430591455734002,"score_gpt":0.22555683591830167,"score_spread":0.21125092136096166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106654764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98866034,0.0011821338,0.0034310461,0.00027014513,0.00011112349,0.00008864524,0.0034652716,0.0007445279,0.0020467383],"genre_scores_gemma":[0.9784879,0.0012654996,0.0042375997,0.00031401258,0.00008316134,0.00024116166,0.0046101273,0.00046492968,0.010295516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99927884,0.00007993893,0.0001004851,0.0002107927,0.00013593675,0.00019401325],"domain_scores_gemma":[0.99861526,0.000104112216,0.0005997093,0.00011002568,0.00006321281,0.00050766795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003626483,0.0013910115,0.00080957427,0.0016058375,0.00032072543,0.0009306224,0.0005301524,0.0013552274,0.0059661483],"category_scores_gemma":[0.00033619074,0.0008793787,0.00066950073,0.0003571953,0.0008299822,0.000645453,0.00065465947,0.0022983481,0.0025146683],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005070706,0.00011478877,0.00031631778,0.000060108687,0.000014914268,0.00015059487,0.000021650047,0.000060616592,0.99790645,0.0001092448,0.00009466448,0.0006435104],"study_design_scores_gemma":[0.0004075187,0.0038446824,0.037672505,0.00013717897,0.00014893575,0.0056191585,0.0003597995,0.002473294,0.9422538,0.00043030488,0.0065645296,0.0000882943],"about_ca_topic_score_codex":0.00038649776,"about_ca_topic_score_gemma":0.0003360201,"teacher_disagreement_score":0.0059661483,"about_ca_system_score_codex":0.00031313454,"about_ca_system_score_gemma":0.00020539686,"threshold_uncertainty_score":0.019958794},"labels":[],"label_agreement":null},{"id":"W2106910438","doi":"10.4049/jimmunol.1003706","title":"Pre-B Cell Colony-Enhancing Factor (PBEF/Nampt/Visfatin) Primes Neutrophils for Augmented Respiratory Burst Activity through Partial Assembly of the NADPH Oxidase","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Respiratory burst; NADPH oxidase; Nicotinamide mononucleotide; Proinflammatory cytokine; NAD+ kinase; Priming (agriculture); Phosphorylation; Cell biology; Kinase; Granulocyte; Reactive oxygen species; Chemistry; Biology; Biochemistry; Inflammation; Immunology; Enzyme; Nicotinamide adenine dinucleotide","score_opus":0.027797043426251052,"score_gpt":0.25829500170659425,"score_spread":0.2304979582803432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106910438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949922,0.001377031,0.0023066755,0.000085869426,0.000024613057,0.000032447308,0.00014179987,0.000053211777,0.0009860195],"genre_scores_gemma":[0.9945261,0.0006215769,0.0033449589,0.000046835645,0.000013608493,0.000032922962,0.00033424157,0.000011173456,0.0010685377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999298,0.000016866346,0.00000524159,0.000011722664,0.000016008014,0.000020410887],"domain_scores_gemma":[0.99994874,0.0000114157365,0.0000111540985,0.0000063131038,0.000005072383,0.000017232036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010154342,0.00037003245,0.00016162253,0.00013373156,0.00007749826,0.00013557391,0.000106040476,0.00019341463,0.0010955256],"category_scores_gemma":[0.00009541455,0.00008410136,0.00016290596,0.00006844832,0.00016152223,0.00012430036,0.00014551,0.00049032544,0.00022717543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027952527,0.000037000074,0.00007684102,0.000026038933,0.0000025071256,0.000034014396,0.000007068264,0.000035771827,0.9979557,0.00005228561,0.000027196287,0.0014660325],"study_design_scores_gemma":[0.00003177105,0.00067218,0.0016378959,0.000004052177,0.0000074107948,0.00024761297,0.000010290362,0.000457915,0.9955047,0.000047614878,0.0013767085,0.0000019977049],"about_ca_topic_score_codex":0.00026993942,"about_ca_topic_score_gemma":0.00032211604,"teacher_disagreement_score":0.0010955256,"about_ca_system_score_codex":0.00012118313,"about_ca_system_score_gemma":0.00012303834,"threshold_uncertainty_score":0.0036649108},"labels":[],"label_agreement":null},{"id":"W2106926219","doi":"10.1093/annonc/mdi226","title":"Feasibility of high-dose interleukin-2 in heavily pretreated pediatric cancer patients","year":2005,"lang":"en","type":"article","venue":"Annals of Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Gastroenterology; Internal medicine; Creatinine; Albumin; Refractory (planetary science); Alkaline phosphatase; Oncology; Surgery","score_opus":0.04433238645170595,"score_gpt":0.35053545970824257,"score_spread":0.3062030732565366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106926219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99566984,0.0016997219,0.00060301815,0.00038699087,0.00003678196,0.000058774825,0.00007799502,0.000015285901,0.0014514482],"genre_scores_gemma":[0.9983613,0.0005332288,0.0007222558,0.000088555396,0.000045501063,0.000041680636,0.00008859113,0.0000033144945,0.00011555805],"study_design_codex":"observational","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9998179,0.00010803197,0.0000074624627,0.000018258163,0.000015326576,0.00003290992],"domain_scores_gemma":[0.99950314,0.00022935146,0.00006615699,0.00002319418,0.000026253892,0.00015192608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043430642,0.00019636119,0.0003098439,0.00012047904,0.0002492437,0.00037416906,0.00016208754,0.0002288202,0.0015992123],"category_scores_gemma":[0.0011418359,0.00010029193,0.00025124906,0.00013445501,0.00020429252,0.0003521587,0.00022093853,0.00061723066,0.0001576066],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0548777,0.0030614943,0.70484495,0.0002910813,0.00018222943,0.0027736803,0.0004126858,0.0023462886,0.0307635,0.00097163033,0.002464263,0.19701047],"study_design_scores_gemma":[0.005603141,0.12047625,0.8125407,0.00021554227,0.00065787986,0.008246906,0.0015931873,0.006088219,0.029827056,0.00095264654,0.013748969,0.000049441813],"about_ca_topic_score_codex":0.0008637153,"about_ca_topic_score_gemma":0.0012903503,"teacher_disagreement_score":0.0015992123,"about_ca_system_score_codex":0.0003441415,"about_ca_system_score_gemma":0.00082684954,"threshold_uncertainty_score":0.005349934},"labels":[],"label_agreement":null},{"id":"W2107152134","doi":"10.1016/j.ccm.2008.08.001","title":"The Immune System in Critical Illness","year":2008,"lang":"en","type":"review","venue":"Clinics in Chest Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Immune system; Sepsis; Innate immune system; Acquired immune system; Immunology; Medicine; Critical illness; Pattern recognition receptor; Neuroscience; Critically ill; Biology; Intensive care medicine","score_opus":0.07102966443724441,"score_gpt":0.40452742781610884,"score_spread":0.33349776337886444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107152134","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022285605,0.9980215,0.00008814465,0.0003118078,0.0009993782,0.000003063156,0.000004093311,0.0000039057345,0.00054573134],"genre_scores_gemma":[0.0002910752,0.99596345,0.00017880196,0.00051028485,0.0021200427,0.000007033813,0.0000131351035,0.000001287555,0.00091482804],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99968576,0.00006787072,0.00004326214,0.000048470523,0.0001251668,0.000029466251],"domain_scores_gemma":[0.99915206,0.00042024424,0.00010895504,0.000024486835,0.0001966551,0.00009757813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009630063,0.0014627088,0.0023187282,0.0026834896,0.00046287905,0.0016466429,0.0014206601,0.002587342,0.00454398],"category_scores_gemma":[0.001507267,0.00046413208,0.0004862123,0.0029187168,0.0011516765,0.0025698545,0.0014150928,0.0037888507,0.0037220004],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009932898,0.00007552127,0.00017894706,0.009670415,0.000056121677,0.0002864285,0.00004685324,0.00028250113,0.00070442754,0.002510871,0.0964322,0.88965625],"study_design_scores_gemma":[0.000035122222,0.00007089622,0.000609915,0.003957803,0.00006976167,0.0012343362,0.000052829495,0.000090060836,0.00010953156,0.001860016,0.9918937,0.000015980542],"about_ca_topic_score_codex":0.0010418489,"about_ca_topic_score_gemma":0.0026210258,"teacher_disagreement_score":0.00454398,"about_ca_system_score_codex":0.00075475336,"about_ca_system_score_gemma":0.0014152499,"threshold_uncertainty_score":0.015201151},"labels":[],"label_agreement":null},{"id":"W2107348873","doi":"10.1001/archinte.165.1.75","title":"The Association of Interleukin 6 Haplotype Clades With Mortality in Critically Ill Adults","year":2005,"lang":"en","type":"article","venue":"Archives of Internal Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital","funders":"","keywords":"Haplotype; Genotyping; Biology; Single-nucleotide polymorphism; Population; Genetics; Systemic inflammatory response syndrome; Sepsis; Genotype; Immunology; Medicine; Gene","score_opus":0.005544381214505817,"score_gpt":0.24981063505687912,"score_spread":0.2442662538423733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107348873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99973625,0.000070101945,0.000047102294,0.0000151391105,0.0000019929869,0.0000015128912,0.000058494606,8.276894e-7,0.00006849906],"genre_scores_gemma":[0.9998435,0.000018141141,0.000043070897,0.0000064705955,0.0000037600955,0.000001932031,0.00006742914,4.7519438e-7,0.000015135191],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999739,0.000076185985,0.000031733856,0.000066950386,0.00004129401,0.000044979493],"domain_scores_gemma":[0.9984073,0.0003702084,0.00080636283,0.0000753201,0.00009206691,0.0002487699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033856474,0.00017573452,0.00019319254,0.0003095997,0.00025320635,0.00025899545,0.00015214556,0.000308865,0.0013278086],"category_scores_gemma":[0.002101394,0.00011535521,0.00014443356,0.00025021704,0.00018081126,0.00020255157,0.0003032627,0.00046152403,0.0001254053],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015981792,0.000009758127,0.99877506,0.0000031229295,0.000013550402,0.000043817763,0.000026271173,0.000033696968,0.0003040613,0.0000072582666,0.00003335836,0.0005901363],"study_design_scores_gemma":[0.000011058722,0.00013745048,0.9988329,0.0000041592516,0.000018824296,0.00039057556,0.000072124916,0.00032689428,0.00010196584,0.000037141035,0.00006443803,0.0000025090087],"about_ca_topic_score_codex":0.0005237824,"about_ca_topic_score_gemma":0.0006991536,"teacher_disagreement_score":0.0013278086,"about_ca_system_score_codex":0.00008606465,"about_ca_system_score_gemma":0.00010706292,"threshold_uncertainty_score":0.0044419765},"labels":[],"label_agreement":null},{"id":"W2107385964","doi":"10.1183/09031936.06.00010806","title":"Toll-like receptor mRNA levels in alveolar macrophages after inhalation of endotoxin","year":2006,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Bronchoalveolar lavage; TLR4; Lipopolysaccharide; CD14; Alveolar macrophage; Receptor; Immunology; Toll-like receptor; Innate immune system; In vivo; Inhalation; Immune system; Macrophage; Biology; Medicine; In vitro; Lung; Internal medicine; Anesthesia","score_opus":0.01167417613906864,"score_gpt":0.22332551543260856,"score_spread":0.2116513392935399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107385964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980242,0.0010069588,0.00033746636,0.0000399308,0.00001713875,0.000017221097,0.000246505,0.000015000464,0.00029567146],"genre_scores_gemma":[0.9967539,0.0006348656,0.0006046366,0.00008442816,0.000033421948,0.00008690889,0.00048222,0.000012539532,0.0013072045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997583,0.00006326465,0.00001919193,0.000051824147,0.00004912717,0.000058259673],"domain_scores_gemma":[0.99971575,0.0000752586,0.00007216086,0.000026770758,0.000058399095,0.0000515298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002650953,0.00022011745,0.00031556262,0.00027640996,0.00014776025,0.00032774924,0.00007998162,0.00035440325,0.0013349126],"category_scores_gemma":[0.00036432358,0.00021651227,0.0001577025,0.0001326648,0.0002853563,0.00014893601,0.00014464842,0.00033086987,0.00046830974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014562121,0.00004022268,0.0020352397,0.000034982688,0.0000072653393,0.000092230934,0.000051516734,0.000011212168,0.995076,0.000010912767,0.000021993956,0.0011622071],"study_design_scores_gemma":[0.00033025845,0.005174166,0.30761358,0.00003245526,0.00015181222,0.0012509695,0.0005295751,0.00052647415,0.6827051,0.00020520986,0.0014511833,0.000029240298],"about_ca_topic_score_codex":0.0002246947,"about_ca_topic_score_gemma":0.00023806366,"teacher_disagreement_score":0.0013349126,"about_ca_system_score_codex":0.00011603768,"about_ca_system_score_gemma":0.000119343844,"threshold_uncertainty_score":0.004465699},"labels":[],"label_agreement":null},{"id":"W2107567132","doi":"10.14814/phy2.12225","title":"Pattern recognition receptors in the gut: analysis of their expression along the intestinal tract and the crypt/villus axis","year":2015,"lang":"en","type":"article","venue":"Physiological Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Institut National de la Recherche Agronomique; Agence Nationale de la Recherche","keywords":"Crypt; Ileum; Jejunum; Lamina propria; Biology; Small intestine; TLR3; Pathology; Immune system; Immunology; Toll-like receptor; Endocrinology; Medicine; Innate immune system; Epithelium; Genetics","score_opus":0.04205419729146097,"score_gpt":0.26204355194991974,"score_spread":0.21998935465845876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107567132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99722964,0.000779685,0.001233815,0.000017637953,0.000003778382,0.000020636733,0.000288728,0.000014149792,0.00041187828],"genre_scores_gemma":[0.9909435,0.0011032217,0.005158272,0.00005915996,0.000008675421,0.00008858665,0.00079342513,0.000012368854,0.0018328512],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992335,0.000009781643,0.0000043424034,0.000023405111,0.000016270607,0.000023006369],"domain_scores_gemma":[0.99990773,0.000014628308,0.000028020817,0.0000055129394,0.00001664124,0.000027421514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013012311,0.00012716206,0.00017520948,0.000362965,0.00010924711,0.00020546051,0.000079585,0.00022888674,0.0007128542],"category_scores_gemma":[0.00007064088,0.00012428164,0.00016721674,0.00022311663,0.00017219303,0.00017627624,0.00015013388,0.00023536729,0.0002704681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016897537,0.0000062695626,0.0029601892,0.000031891002,0.000003302863,0.000044517612,0.000024969546,0.00001377007,0.99569595,0.00001037516,0.0000069650077,0.0010327568],"study_design_scores_gemma":[0.000034664077,0.0017383778,0.7827123,0.000022780807,0.000060262562,0.0012632255,0.000403718,0.00074797147,0.21085694,0.0000913714,0.0020497674,0.000018548839],"about_ca_topic_score_codex":0.0004054868,"about_ca_topic_score_gemma":0.00055861037,"teacher_disagreement_score":0.0007128542,"about_ca_system_score_codex":0.00009839366,"about_ca_system_score_gemma":0.000093981034,"threshold_uncertainty_score":0.0023847222},"labels":[],"label_agreement":null},{"id":"W2107623090","doi":"10.1189/jlb.0206099","title":"TLR4 gene dosage contributes to endotoxin-induced acute respiratory inflammation","year":2006,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Studium Loire Valley-Institute for Advanced Studies; Canadian Institutes of Health Research; Centre National de la Recherche Scientifique","keywords":"TLR4; Chemokine; Biology; Inflammation; Immunology; Lipopolysaccharide; Lung; Tumor necrosis factor alpha; Bronchoalveolar lavage; Cytokine; Medicine; Internal medicine","score_opus":0.011831178517807189,"score_gpt":0.2590383182717944,"score_spread":0.24720713975398723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107623090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960587,0.00059208524,0.002366282,0.00015868165,0.000017114819,0.000020104007,0.00021296923,0.000082843704,0.0004911703],"genre_scores_gemma":[0.9947136,0.00061217183,0.0023357307,0.00006623775,0.000017342229,0.00004538924,0.00034677927,0.000041493036,0.0018212697],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9994783,0.00016071112,0.000053733,0.000072398536,0.000122571,0.000112283175],"domain_scores_gemma":[0.9994493,0.00010961162,0.00020820418,0.00007327553,0.000036576585,0.00012289707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003080378,0.00055340095,0.00036161297,0.00054649025,0.00013788833,0.00047293984,0.00026026188,0.00057015376,0.0014849175],"category_scores_gemma":[0.00036521815,0.00031932656,0.0003524465,0.00015883737,0.00053434155,0.00027138635,0.0003479208,0.00087373884,0.0003586725],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019004552,0.000030082076,0.00020613142,0.000017677814,0.0000041087787,0.000036333142,0.000004558329,0.00004294015,0.99892396,0.00004686628,0.000012698558,0.0004845551],"study_design_scores_gemma":[0.000053549258,0.0007083636,0.0060593504,0.0000092559285,0.00006383095,0.00039951742,0.000029893921,0.0012360407,0.9903886,0.00012073152,0.00092063384,0.0000102017275],"about_ca_topic_score_codex":0.0001910748,"about_ca_topic_score_gemma":0.00024827695,"teacher_disagreement_score":0.0014849175,"about_ca_system_score_codex":0.00033947945,"about_ca_system_score_gemma":0.00016621366,"threshold_uncertainty_score":0.0049675703},"labels":[],"label_agreement":null},{"id":"W2107865650","doi":"10.1096/fj.00-0339com","title":"Toll‐like receptor 4: the missing link of the cerebral innate immune response triggered by circulating gram‐negative bacterial cell wall components","year":2001,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":504,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Medical Research Council Canada","keywords":"Biology; Innate immune system; TLR4; Toll-like receptor; Proinflammatory cytokine; Circumventricular organs; JUNB; Cell biology; Molecular biology; Signal transduction; Receptor; Gene expression; Immune system; Immunology; Inflammation; Gene; Biochemistry","score_opus":0.014429118577586856,"score_gpt":0.22242132831953051,"score_spread":0.20799220974194366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107865650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92303735,0.050141968,0.01856396,0.0028795137,0.00042704746,0.00006005888,0.00076129695,0.00034111706,0.0037875737],"genre_scores_gemma":[0.95274943,0.022492165,0.0100953495,0.00061261584,0.0002633012,0.00008319153,0.0011939326,0.000032488235,0.012477565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999049,0.000014773371,0.000005692568,0.000027351934,0.000022224118,0.000025087533],"domain_scores_gemma":[0.9999516,0.000006471307,0.000014316288,0.000005579861,0.000009917624,0.0000121467165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018360399,0.00052037986,0.00031584044,0.00023662443,0.0001632885,0.0003562737,0.00027552096,0.00042262147,0.0016190035],"category_scores_gemma":[0.00014321916,0.00016611829,0.0001300276,0.00009293327,0.00045817334,0.0006312092,0.00017935499,0.0006971346,0.00057160296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006768701,0.000019384388,0.0009184663,0.00036665477,0.000020910984,0.0008398132,0.00002807541,0.00007137489,0.9808184,0.00087500864,0.00035264343,0.015012431],"study_design_scores_gemma":[0.00010793292,0.000891883,0.030223073,0.00015463008,0.00017896121,0.010017985,0.00031532338,0.0014381823,0.9204776,0.0053215264,0.030822495,0.000050409388],"about_ca_topic_score_codex":0.0004024133,"about_ca_topic_score_gemma":0.00041024014,"teacher_disagreement_score":0.0016190035,"about_ca_system_score_codex":0.00032628703,"about_ca_system_score_gemma":0.00047825414,"threshold_uncertainty_score":0.005416155},"labels":[],"label_agreement":null},{"id":"W2107955975","doi":"10.1093/intimm/dxp044","title":"Synthetic methylated CpG ODNs are potent in vivo adjuvants when delivered in liposomal nanoparticles","year":2009,"lang":"en","type":"article","venue":"International Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Arbutus Biopharma (Canada)","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TLR9; CpG Oligodeoxynucleotide; Toll-Like Receptor 9; CpG site; DNA methylation; Methylation; In vivo; Chemistry; Oligonucleotide; Innate immune system; Folate receptor; Immune system; Receptor; Guanine; Molecular biology; Cell biology; Biology; Biochemistry; DNA; Gene expression; Immunology; Gene; Genetics; Nucleotide","score_opus":0.009537583772299808,"score_gpt":0.2364415463368946,"score_spread":0.2269039625645948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107955975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9761129,0.004014242,0.016934682,0.00018251079,0.000065591754,0.000081196245,0.00019206993,0.00011811572,0.0022987116],"genre_scores_gemma":[0.9906557,0.001126523,0.0056555346,0.000067327084,0.000018674105,0.000033636865,0.00016466259,0.0000178405,0.0022601185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999,0.00002729536,0.0000067704204,0.000011142147,0.000034427623,0.00002031691],"domain_scores_gemma":[0.99990845,0.000017548658,0.00003183512,0.0000061593655,0.00001310214,0.000022886456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002642784,0.00037141572,0.00014235298,0.00015679088,0.000056102137,0.00018581781,0.00011656089,0.00027059112,0.00082529057],"category_scores_gemma":[0.00019928456,0.00013953891,0.00010285644,0.00006857049,0.00014665234,0.0001713144,0.00017976745,0.0003052558,0.00028311062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000800303,0.000013963584,0.000051481984,0.00003765195,0.0000027453298,0.000013057128,0.00000502319,0.00010583463,0.99814725,0.00009149708,0.000015500533,0.0014360178],"study_design_scores_gemma":[0.000009075038,0.00037482043,0.0002795134,0.000004968833,0.000009045305,0.000067604895,0.000004227325,0.00040100084,0.9977143,0.00005214873,0.0010816155,0.0000017502279],"about_ca_topic_score_codex":0.00012180584,"about_ca_topic_score_gemma":0.00021594221,"teacher_disagreement_score":0.00082529057,"about_ca_system_score_codex":0.00012858452,"about_ca_system_score_gemma":0.00015726012,"threshold_uncertainty_score":0.0027608275},"labels":[],"label_agreement":null},{"id":"W2108297160","doi":"10.4049/jimmunol.179.7.4357","title":"TLR2 Signaling Renders Quiescent Naive and Memory CD4+ T Cells More Susceptible to Productive Infection with X4 and R5 HIV-Type 1","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"Faculté de Médecine, Université Laval; Canadian Foundation for AIDS Research; Université Laval","keywords":"Effector; TLR2; Biology; Phenotype; Immune system; Immunology; Memory T cell; Virus; Virology; T cell; Receptor; Innate immune system; Cell biology; Genetics; Gene","score_opus":0.008066519503971867,"score_gpt":0.22833625123006385,"score_spread":0.220269731726092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108297160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99874204,0.00034307205,0.00021191976,0.000032417596,0.000011161003,0.00000569557,0.000039534298,0.000021048232,0.00059314177],"genre_scores_gemma":[0.9981675,0.0001688226,0.00021230443,0.000060663104,0.000015008428,0.000012390901,0.00014970811,0.0000048705533,0.0012086754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968624,0.00006744117,0.000019600051,0.000047712027,0.000038895174,0.000140221],"domain_scores_gemma":[0.99983466,0.000028659288,0.00003246507,0.000028276654,0.000010241165,0.00006565772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001921859,0.00029168525,0.00024457744,0.00018733977,0.00018824956,0.0005396118,0.00020385822,0.0003598908,0.002394454],"category_scores_gemma":[0.000253049,0.00016671937,0.00022587784,0.00008079495,0.00026431723,0.0002980201,0.00026594487,0.00049098325,0.00036144184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005684351,0.00006932707,0.00075461704,0.000026758802,0.000006114263,0.00012059533,0.000035329875,0.00003948661,0.9967347,0.00006955754,0.000056760815,0.0015183407],"study_design_scores_gemma":[0.00037478856,0.006118725,0.07382695,0.000041340423,0.00007521062,0.0030981337,0.00047735593,0.0017481216,0.9078686,0.0004596023,0.0058802194,0.000030990846],"about_ca_topic_score_codex":0.00027538466,"about_ca_topic_score_gemma":0.0002725979,"teacher_disagreement_score":0.002394454,"about_ca_system_score_codex":0.00015790548,"about_ca_system_score_gemma":0.00016406683,"threshold_uncertainty_score":0.008010268},"labels":[],"label_agreement":null},{"id":"W2108904221","doi":"10.1038/sj.bjp.0706021","title":"Erythromycin exerts <i>in vivo</i> anti‐inflammatory activity downregulating cell adhesion molecule expression","year":2004,"lang":"en","type":"article","venue":"British Journal of Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Generalitat Valenciana; Ministerio de Ciencia y Tecnología; Ministerio de Educación, Cultura y Deporte","keywords":"Downregulation and upregulation; Lipopolysaccharide; Chemistry; Myeloperoxidase; Intercellular Adhesion Molecule-1; Bronchoalveolar lavage; Cell adhesion molecule; Pharmacology; Tumor necrosis factor alpha; In vivo; Erythromycin; Inflammation; Immunology; Biology; Medicine; Internal medicine; Lung; Biochemistry; Antibiotics","score_opus":0.006286416138171304,"score_gpt":0.23856492773892815,"score_spread":0.23227851160075685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2108904221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9772059,0.010508947,0.005755678,0.00025429932,0.000067783185,0.00010102487,0.0006917023,0.0003078243,0.005106912],"genre_scores_gemma":[0.9895963,0.003973419,0.0028294222,0.00012577542,0.000045825687,0.00006936658,0.00068947446,0.00003193543,0.0026385165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998271,0.00005382141,0.000016573633,0.000027287595,0.000036179194,0.00003903924],"domain_scores_gemma":[0.999864,0.000022419817,0.000056969326,0.000014685549,0.00001680115,0.000025152987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011507144,0.00041525107,0.00038063055,0.00017469136,0.00008193745,0.00024241653,0.00016193521,0.00025130442,0.0011677714],"category_scores_gemma":[0.0001391431,0.000087718545,0.00020798063,0.000094454146,0.00016097166,0.00015076566,0.00011925807,0.00041497345,0.0003369072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010661986,0.000024449011,0.00006718661,0.00005504848,0.000004693865,0.000023729153,0.000002681709,0.000022435202,0.9979551,0.00002414641,0.00003815348,0.0016758117],"study_design_scores_gemma":[0.000023692832,0.0012151148,0.0043949364,0.00000841701,0.000023637898,0.00018137923,0.0000064033975,0.00021304544,0.9915343,0.000012230711,0.0023841807,0.0000027250044],"about_ca_topic_score_codex":0.0003345263,"about_ca_topic_score_gemma":0.00043941944,"teacher_disagreement_score":0.0011677714,"about_ca_system_score_codex":0.00017111654,"about_ca_system_score_gemma":0.00011484463,"threshold_uncertainty_score":0.0039066076},"labels":[],"label_agreement":null},{"id":"W2109382351","doi":"10.1186/1471-2156-9-50","title":"Bovine CD14 gene characterization and relationship between polymorphisms and surface expression on monocytes and polymorphonuclear neutrophils","year":2008,"lang":"en","type":"article","venue":"BMC Genetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Novalait; Université de Montréal; Public Health Agency of Canada; Dairy Farmers of Canada","keywords":"GenBank; Biology; Single-nucleotide polymorphism; Gene; Genetics; Coding region; Molecular biology; Genotype; CD14; SNP; Immune system","score_opus":0.03597086737029755,"score_gpt":0.23063524773178173,"score_spread":0.19466438036148417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109382351","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995732,0.00013843871,0.00009866396,0.0000050603912,0.000001425261,0.0000015108221,0.00010324089,9.663767e-7,0.00007754939],"genre_scores_gemma":[0.9990632,0.000065806395,0.00032490972,0.000011093493,0.000003214924,0.0000049363966,0.00033723394,0.000002026075,0.00018757547],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997434,0.00004683147,0.00002335586,0.000091227186,0.000048560858,0.00004665725],"domain_scores_gemma":[0.99971694,0.0000937681,0.000092108494,0.00001302526,0.000036519763,0.00004768879],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025318147,0.00016156674,0.00020138592,0.0005886455,0.00016951708,0.00025761657,0.00014381281,0.00028245844,0.0009078429],"category_scores_gemma":[0.00040192314,0.000090936184,0.00015877165,0.00044848185,0.00017567335,0.00006260755,0.0001144179,0.00018131571,0.00016263759],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022977998,0.00011777841,0.7277838,0.000081733175,0.00010718488,0.0005430822,0.00040973647,0.0001705621,0.26058146,0.00009693917,0.00010972825,0.007700164],"study_design_scores_gemma":[0.000014867736,0.00033101026,0.9901108,0.000010995994,0.00005645732,0.0008512517,0.00011872243,0.00046239095,0.0073614675,0.000047776222,0.000629714,0.000004496963],"about_ca_topic_score_codex":0.001855126,"about_ca_topic_score_gemma":0.0016293296,"teacher_disagreement_score":0.001855126,"about_ca_system_score_codex":0.00023032437,"about_ca_system_score_gemma":0.00008006021,"threshold_uncertainty_score":0.003688693},"labels":[],"label_agreement":null},{"id":"W2109646193","doi":"10.1152/ajpgi.00058.2013","title":"Kupffer cells and activation of endothelial TLR4 coordinate neutrophil adhesion within liver sinusoids during endotoxemia","year":2013,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Intravital microscopy; Endothelium; Biology; TLR4; Inflammation; Innate immune system; Immunology; Endothelial activation; Endothelial stem cell; Pathology; Cell biology; Medicine; Immune system; In vivo; Endocrinology","score_opus":0.005183405817157078,"score_gpt":0.18965638269556215,"score_spread":0.18447297687840508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109646193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99633884,0.0007652811,0.0020116626,0.00006579044,0.000014650376,0.00001957179,0.00006745809,0.00003440805,0.00068237126],"genre_scores_gemma":[0.9958616,0.00045410366,0.0018683161,0.000046072124,0.00001649682,0.000057780886,0.00012413674,0.00001003149,0.0015615874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974936,0.00006251642,0.000022005977,0.00003751148,0.00005518407,0.00007340989],"domain_scores_gemma":[0.9998024,0.0000152459115,0.00007886724,0.000020701698,0.00002695115,0.00005584498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022292377,0.00023993975,0.00028122694,0.00024998432,0.00014909075,0.0002907859,0.00009676478,0.00024489575,0.00073787424],"category_scores_gemma":[0.00021089391,0.00015903772,0.00022077028,0.00009665982,0.0002324079,0.00022651773,0.00035736477,0.00060288655,0.00026601003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002694789,0.000013339796,0.0005728223,0.000028028893,0.000003750825,0.00014267203,0.000056943365,0.000029972953,0.9980349,0.00013296402,0.000029776083,0.0006851919],"study_design_scores_gemma":[0.00005853761,0.00043397478,0.05527183,0.000018855228,0.00004357001,0.0007370893,0.00034585447,0.0025204523,0.9377867,0.00023620151,0.0025340407,0.000012748599],"about_ca_topic_score_codex":0.00037559343,"about_ca_topic_score_gemma":0.00043489801,"teacher_disagreement_score":0.00073787424,"about_ca_system_score_codex":0.0003070526,"about_ca_system_score_gemma":0.0001846389,"threshold_uncertainty_score":0.0024684668},"labels":[],"label_agreement":null},{"id":"W2109821644","doi":"10.1128/cdli.12.11.1292-1297.2005","title":"Comparison of Lipopolysaccharide-Binding Functions of CD14 and MD-2","year":2005,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Recombinant DNA; CD14; Lipopolysaccharide; Biochemistry; Fusion protein; Binding protein; Biology; Plasma protein binding; Bacterial outer membrane; Lipid A; Escherichia coli; Binding site; Myristoylation; Chemistry; Molecular biology; Receptor; Membrane; Immunology; Gene","score_opus":0.03771483392730873,"score_gpt":0.356609687283036,"score_spread":0.31889485335572726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109821644","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764353,0.000776835,0.0008985733,0.000044421766,0.00001355316,0.000016495129,0.00013571895,0.000008625419,0.0004621147],"genre_scores_gemma":[0.9931166,0.000533819,0.0034552605,0.00009859839,0.000018100556,0.000052678763,0.0014539055,0.000012896173,0.0012581273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970764,0.00006657417,0.000031160518,0.00003953631,0.00008115342,0.00007391788],"domain_scores_gemma":[0.99965,0.000095412,0.00003092568,0.00002323802,0.00010695036,0.00009347389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029694266,0.00040230592,0.00030955186,0.0005311574,0.0001758946,0.00035955597,0.00034614568,0.00041578736,0.0010107905],"category_scores_gemma":[0.000719035,0.00016829147,0.0003708673,0.00022533961,0.00015250884,0.00025769888,0.00030234552,0.00033879303,0.000434633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046885177,0.00006353042,0.0014108832,0.00006662891,0.000014178594,0.00006639473,0.000031877902,0.00016526584,0.995811,0.00013244955,0.000039807306,0.0017291425],"study_design_scores_gemma":[0.00009440859,0.0009530133,0.030659528,0.0000264941,0.000047430574,0.00089845626,0.00013478626,0.00835395,0.9550762,0.0001762917,0.00355525,0.000024241552],"about_ca_topic_score_codex":0.00042281914,"about_ca_topic_score_gemma":0.00024469174,"teacher_disagreement_score":0.0010107905,"about_ca_system_score_codex":0.00036973762,"about_ca_system_score_gemma":0.00014858891,"threshold_uncertainty_score":0.0033814907},"labels":[],"label_agreement":null},{"id":"W2109821775","doi":"10.1186/1745-6215-15-218","title":"The EUPHRATES trial (Evaluating the Use of Polymyxin B Hemoperfusion in a Randomized controlled trial of Adults Treated for Endotoxemia and Septic shock): study protocol for a randomized controlled trial","year":2014,"lang":"en","type":"article","venue":"Trials","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St. Michael's Hospital","funders":"University of Toronto; Medical Center, University of Pittsburgh; University of Alberta; University of Pittsburgh","keywords":"Hemoperfusion; Medicine; Septic shock; Randomized controlled trial; Sepsis; Placebo; Clinical endpoint; Intensive care medicine; Interim analysis; Internal medicine","score_opus":0.07219346618916545,"score_gpt":0.3883827289817734,"score_spread":0.31618926279260795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109821775","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051956377,0.0015905618,0.0023262606,0.00095401314,0.0010513142,0.98287773,0.0034691652,0.0002512644,0.0022839897],"genre_scores_gemma":[0.0059404825,0.0005819162,0.003618543,0.0007639874,0.0001539892,0.9867518,0.000737574,0.000027921616,0.0014238082],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.97748214,0.015621399,0.0017558495,0.0018918602,0.0018799179,0.0013689033],"domain_scores_gemma":[0.9898807,0.0028793912,0.0026405132,0.0012466955,0.0017961904,0.0015564995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.025947997,0.0057672504,0.009788584,0.0016456563,0.0019320898,0.004795736,0.0030956974,0.0059071532,0.03844736],"category_scores_gemma":[0.02803507,0.0023641156,0.004590387,0.0025804574,0.0033891955,0.003667906,0.0017850607,0.007179733,0.007334129],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9379236,0.003194822,0.0009929312,0.017127482,0.0039692274,0.00016932946,0.00018979452,0.0011938593,0.0015864703,0.0032799996,0.019389397,0.010983051],"study_design_scores_gemma":[0.9749653,0.0066002198,0.0009851322,0.0016910254,0.00085957814,0.00003940932,0.000056014876,0.0011033688,0.00028418828,0.0014446579,0.011925569,0.000045571574],"about_ca_topic_score_codex":0.0014798056,"about_ca_topic_score_gemma":0.0033270733,"teacher_disagreement_score":0.03844736,"about_ca_system_score_codex":0.0039703385,"about_ca_system_score_gemma":0.009530481,"threshold_uncertainty_score":0.13722777},"labels":[],"label_agreement":null},{"id":"W2110395890","doi":"10.1111/all.12675","title":"<scp>MPLA</scp> shows attenuated pro‐inflammatory properties and diminished capacity to activate mast cells in comparison with <scp>LPS</scp>","year":2015,"lang":"en","type":"article","venue":"Allergy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Deutsche Forschungsgemeinschaft; Canadian Institutes of Health Research; Medizinische Universität Wien; European Commission","keywords":"Lipopolysaccharide; Immune system; Tumor necrosis factor alpha; Cytokine; Immunology; Ex vivo; Monocyte; Inflammation; Biology; In vivo","score_opus":0.041246042736191584,"score_gpt":0.22250900981547503,"score_spread":0.18126296707928344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110395890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956251,0.00081841537,0.0014870369,0.00014478108,0.0000255682,0.000027460357,0.00085995946,0.00007310955,0.0009385443],"genre_scores_gemma":[0.992478,0.00047163738,0.0021726212,0.00009065081,0.000026335038,0.000054704917,0.0025263594,0.000038751183,0.002140854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979335,0.00003774272,0.000027373933,0.000033600456,0.000066333465,0.00004153806],"domain_scores_gemma":[0.99971443,0.00005023409,0.00010603275,0.000035178313,0.00003516919,0.00005885542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014359658,0.00046492185,0.0002656694,0.0002747345,0.00013716944,0.00021442049,0.00020140588,0.0004174405,0.0028836273],"category_scores_gemma":[0.00016445197,0.00008619688,0.00032755555,0.00016714563,0.00028754465,0.00022348987,0.00014414491,0.00074302277,0.0007410298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002878437,0.000046339246,0.000068844995,0.00003091007,0.0000055938535,0.000051727708,0.0000030037606,0.00004490381,0.9989243,0.000025717594,0.00004514392,0.00046571236],"study_design_scores_gemma":[0.00001773422,0.0006154237,0.0012453581,0.0000033366325,0.000009306651,0.0003418649,0.0000075598127,0.00018096826,0.99657226,0.000012083475,0.0009914687,0.000002768789],"about_ca_topic_score_codex":0.00054080173,"about_ca_topic_score_gemma":0.00047308343,"teacher_disagreement_score":0.0028836273,"about_ca_system_score_codex":0.00024839037,"about_ca_system_score_gemma":0.00018219385,"threshold_uncertainty_score":0.009646654},"labels":[],"label_agreement":null},{"id":"W2110717939","doi":"10.1158/1055-9965.epi-06-0189","title":"Interleukin-1β and Interleukin-1 Receptor Antagonist Gene Polymorphisms and Gastric Cancer: A Meta-analysis","year":2006,"lang":"en","type":"review","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":236,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Cancer Institute","keywords":"Odds ratio; Meta-analysis; Cancer; Interleukin 1 receptor antagonist; Internal medicine; Oncology; Medicine; Confidence interval; Publication bias; Gastroenterology; Receptor antagonist; Antagonist; Receptor","score_opus":0.10983261953886106,"score_gpt":0.3827246982773831,"score_spread":0.27289207873852206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110717939","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06465056,0.930083,0.0020365727,0.00061466574,0.00035134447,0.00026457265,0.0013200339,0.00009500329,0.0005842975],"genre_scores_gemma":[0.7301916,0.26099262,0.0043827808,0.00083684886,0.00042206526,0.0007877303,0.0017158159,0.000067680085,0.00060283556],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9923833,0.0041524437,0.0012738594,0.0011983236,0.000638136,0.00035399178],"domain_scores_gemma":[0.9848238,0.011298395,0.0018716226,0.00082380185,0.0009030383,0.00027937375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0110874735,0.003111791,0.011976576,0.005661978,0.00080124254,0.0032160056,0.0021420035,0.0021243717,0.0030664066],"category_scores_gemma":[0.018461341,0.0016433501,0.045945406,0.008426768,0.00054744276,0.0011315875,0.0012696963,0.0018953732,0.00030127974],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035525134,0.000034015902,0.03317838,0.03166775,0.92412114,0.00027210297,0.000049514845,0.001552326,0.0005384501,0.000081930535,0.0005431249,0.004408762],"study_design_scores_gemma":[0.00045483667,0.00014760563,0.010629111,0.0016991467,0.985593,0.00011887487,0.00002489242,0.0006408298,0.00012563511,0.00012467726,0.00042722106,0.000014032479],"about_ca_topic_score_codex":0.007346703,"about_ca_topic_score_gemma":0.011453109,"teacher_disagreement_score":0.011976576,"about_ca_system_score_codex":0.0018789297,"about_ca_system_score_gemma":0.0017239683,"threshold_uncertainty_score":0.058636904},"labels":[],"label_agreement":null},{"id":"W2110726506","doi":"10.3390/cells2020330","title":"Targeting Neutrophil Apoptosis for Enhancing the Resolution of Inflammation","year":2013,"lang":"en","type":"article","venue":"Cells","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Efferocytosis; Inflammation; Apoptosis; Annexin A1; Lipid signaling; Immunology; Biology; Cell biology; Annexin; Macrophage; In vitro; Biochemistry","score_opus":0.007241902556976016,"score_gpt":0.20484238913453456,"score_spread":0.19760048657755855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110726506","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39709246,0.51732826,0.059168175,0.0033972538,0.0012271109,0.0004962163,0.000352527,0.0008128006,0.020125233],"genre_scores_gemma":[0.7576252,0.21673007,0.015972765,0.0008118025,0.00027459193,0.00020475904,0.00027301192,0.0000404935,0.008067416],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985874,0.000034454548,0.000011777297,0.00002136697,0.000042334173,0.000031343112],"domain_scores_gemma":[0.99996114,0.000008536149,0.000010044535,0.0000039266115,0.000008469292,0.000007953767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021959945,0.00035075744,0.0004357055,0.00039085362,0.00014774277,0.00035024938,0.00028459608,0.00039316175,0.0013645731],"category_scores_gemma":[0.00013051095,0.00011597882,0.00023792933,0.00018236644,0.000195997,0.00031353484,0.0003299787,0.0008870093,0.00039566966],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004774219,0.00022374823,0.0001561359,0.0013438049,0.000032921977,0.00025675376,0.00004976625,0.0004604933,0.9044093,0.002791944,0.0014616614,0.088336065],"study_design_scores_gemma":[0.00033204703,0.0031986448,0.0021403,0.00020755346,0.0001480045,0.0020789201,0.000052217983,0.0021869382,0.87342083,0.001827725,0.11438218,0.00002464221],"about_ca_topic_score_codex":0.0001930964,"about_ca_topic_score_gemma":0.0004679046,"teacher_disagreement_score":0.0013645731,"about_ca_system_score_codex":0.000286139,"about_ca_system_score_gemma":0.00024044103,"threshold_uncertainty_score":0.0045648813},"labels":[],"label_agreement":null},{"id":"W2110853277","doi":"10.1084/jem.20070628","title":"Selective predisposition to bacterial infections in IRAK-4–deficient children: IRAK-4–dependent TLRs are otherwise redundant in protective immunity","year":2007,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":392,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; SickKids Foundation; University of Toronto; Hospital for Sick Children; Dalhousie University","funders":"Hungarian Scientific Research Fund; Deutsche Forschungsgemeinschaft; European Commission","keywords":"Immunology; Toll-like receptor; Immunity; Biology; Innate immune system; Myeloid; Common variable immunodeficiency; Medicine; Immune system; Antibody","score_opus":0.0088075643539857,"score_gpt":0.27288762822279805,"score_spread":0.26408006386881233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2110853277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99909365,0.00023664886,0.0001483632,0.000056452227,0.0000072528856,0.000009814418,0.00010001049,0.00001548453,0.00033236103],"genre_scores_gemma":[0.99933666,0.00014850419,0.0002009896,0.00003735127,0.000022458571,0.000007436668,0.000087702996,0.00000755496,0.00015127035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999445,0.00010454691,0.00006916182,0.0001508485,0.000073357725,0.00015702046],"domain_scores_gemma":[0.9993994,0.0001354221,0.00023677005,0.000039038623,0.000051854036,0.00013755377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033365455,0.0012431353,0.0007628254,0.0012292998,0.000672857,0.000491012,0.00039771496,0.0008715401,0.0026927718],"category_scores_gemma":[0.001313276,0.0004697814,0.00039667104,0.00056516175,0.0009864174,0.0004965284,0.00059100887,0.0006280952,0.00047908988],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026162893,0.00030476786,0.85424566,0.00016095811,0.000121087134,0.05081788,0.0009966942,0.00031097676,0.079310246,0.0005441968,0.00072661985,0.009844658],"study_design_scores_gemma":[0.00013605991,0.0012416091,0.80783314,0.00008415866,0.00023489211,0.17620608,0.0012251069,0.00064025907,0.010197782,0.00035159301,0.0017995031,0.00004977807],"about_ca_topic_score_codex":0.0011220938,"about_ca_topic_score_gemma":0.00068642624,"teacher_disagreement_score":0.0026927718,"about_ca_system_score_codex":0.00031597057,"about_ca_system_score_gemma":0.00035413323,"threshold_uncertainty_score":0.009008169},"labels":[],"label_agreement":null},{"id":"W2111076710","doi":"10.1093/carcin/bgt228","title":"Innate immunity gene polymorphisms and the risk of colorectal neoplasia","year":2013,"lang":"en","type":"article","venue":"Carcinogenesis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; National Cancer Institute; National Institutes of Health; Association Anne de Bretagne Genetique; Conseil Régional des Pays de la Loire; Groupement des Entreprises Françaises dans la lutte contre le Cancer; Bundesministerium für Bildung und Forschung; National Institute on Aging; Deutsche Forschungsgemeinschaft","keywords":"Colorectal cancer; Colorectal adenoma; Odds ratio; Internal medicine; Single-nucleotide polymorphism; Oncology; Medicine; Gastroenterology; Allele; Cancer; Genotype; Biology; Genetics; Gene","score_opus":0.005148337954694334,"score_gpt":0.1835879920471021,"score_spread":0.17843965409240778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111076710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99873537,0.00080139464,0.00015794518,0.000031027306,0.0000037317068,0.0000048589377,0.000100759215,0.0000045792954,0.00016036592],"genre_scores_gemma":[0.9994023,0.00013715476,0.00022573782,0.00001690949,0.0000071996824,0.000004526895,0.00008659396,0.000001615246,0.00011795459],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994523,0.00019763106,0.00004340269,0.00017532302,0.00008353268,0.000047804606],"domain_scores_gemma":[0.99865997,0.0004369686,0.00055021443,0.00013262797,0.000072746116,0.0001474106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006860943,0.0002735049,0.00037744196,0.00040622114,0.00018179473,0.0003964905,0.00028074606,0.0004889782,0.001226094],"category_scores_gemma":[0.0024915792,0.00024096454,0.00040366277,0.000517998,0.00025016244,0.00017426729,0.00025736567,0.000490885,0.00012171969],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010976971,0.000067942114,0.9921599,0.00003546102,0.00035760712,0.00018493217,0.000049510505,0.00010363876,0.0032814324,0.00006907195,0.00006224185,0.0025304197],"study_design_scores_gemma":[0.000053053773,0.00034767858,0.9976362,0.000007777318,0.0001497629,0.0006621222,0.000029005188,0.00048550652,0.0003393253,0.00011583954,0.00016892016,0.000004765718],"about_ca_topic_score_codex":0.0018490542,"about_ca_topic_score_gemma":0.0020993603,"teacher_disagreement_score":0.0018490542,"about_ca_system_score_codex":0.00017949015,"about_ca_system_score_gemma":0.00018381419,"threshold_uncertainty_score":0.0041016936},"labels":[],"label_agreement":null},{"id":"W2111115205","doi":"10.1128/aac.47.9.2796-2803.2003","title":"Association of the Endotoxin Antagonist E5564 with High-Density Lipoproteins In Vitro: Dependence on Low-Density and Triglyceride-Rich Lipoprotein Concentrations","year":2003,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Eisai","keywords":"Triglyceride; Lipoprotein; Chemistry; Incubation; High-density lipoprotein; Endocrinology; Cholesteryl ester; Cholesterol; Cholesterylester transfer protein; Internal medicine; Low-density lipoprotein; Chromatography; Biochemistry; Biology; Medicine","score_opus":0.004795785148237089,"score_gpt":0.19730954485269867,"score_spread":0.19251375970446158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111115205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952473,0.0025309566,0.0018672011,0.000032989563,0.000008326373,0.00001398779,0.00004718363,0.000010936578,0.00024113493],"genre_scores_gemma":[0.99558216,0.0013467269,0.002002176,0.00005100564,0.000018681596,0.00001642689,0.0002883599,0.0000085211095,0.0006859417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998035,0.00008987205,0.000012634569,0.000024722194,0.000033554174,0.000035714485],"domain_scores_gemma":[0.99986637,0.000050605362,0.000026678345,0.000019773886,0.00002084867,0.000015639269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020147618,0.00023557586,0.00033794448,0.000093591465,0.000101673846,0.00023868596,0.00012144607,0.00019989068,0.0006248585],"category_scores_gemma":[0.00034241876,0.00015846206,0.00016583785,0.00009867706,0.00012592043,0.000110637135,0.00018034481,0.00023814471,0.00035059615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011976006,0.000036771627,0.0017084486,0.0000448175,0.000018861954,0.0000811609,0.000023954124,0.00012457134,0.992589,0.000017351078,0.000024424948,0.004133137],"study_design_scores_gemma":[0.0000828953,0.003915719,0.027830234,0.000014405812,0.00005959864,0.0011229566,0.00007204706,0.0020894045,0.962867,0.00003422945,0.0019006373,0.000010993353],"about_ca_topic_score_codex":0.0005047226,"about_ca_topic_score_gemma":0.00052406284,"teacher_disagreement_score":0.0006248585,"about_ca_system_score_codex":0.00010669825,"about_ca_system_score_gemma":0.00012130488,"threshold_uncertainty_score":0.0020903945},"labels":[],"label_agreement":null},{"id":"W2111418333","doi":"10.1128/iai.72.3.1223-1229.2004","title":"Role of MyD88 in Diminished Tumor Necrosis Factor Alpha Production by Newborn Mononuclear Cells in Response to Lipopolysaccharide","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":164,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; IWK Health Centre; Sick Kids Foundation","keywords":"Tumor necrosis factor alpha; CD14; Peripheral blood mononuclear cell; Lipopolysaccharide; Biology; Secretion; Internal medicine; Endocrinology; Cytokine; Immunology; Immune system; In vitro; Medicine; Biochemistry","score_opus":0.006552624152650698,"score_gpt":0.2238944004802545,"score_spread":0.2173417763276038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111418333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956428,0.0031345694,0.00059404725,0.000078119076,0.000016700762,0.000020144042,0.00009824694,0.000012606433,0.000402766],"genre_scores_gemma":[0.9969518,0.0011464129,0.00087983906,0.00010292822,0.000017482926,0.000051873216,0.0001669986,0.000006124455,0.00067660876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997383,0.00009509021,0.000035737776,0.000036638587,0.00005233796,0.0000418736],"domain_scores_gemma":[0.99971896,0.000039626826,0.000095127194,0.000026912943,0.000027010394,0.00009233216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042575024,0.0002415557,0.00032894223,0.00014182038,0.00010447074,0.00028518005,0.00020596362,0.0002629343,0.0007513314],"category_scores_gemma":[0.0005384699,0.000114756294,0.00015271663,0.00007009801,0.00023646477,0.00011804576,0.00031837905,0.0003045053,0.00025322614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015178681,0.000045860044,0.005992949,0.00014764129,0.000012739685,0.0007975189,0.00015366313,0.00003257179,0.98554635,0.00010042169,0.000068584515,0.005583877],"study_design_scores_gemma":[0.00014000601,0.004212371,0.3211487,0.00016546607,0.00013224353,0.008678568,0.0006810258,0.00096967537,0.65739584,0.00017653072,0.006280498,0.000019102717],"about_ca_topic_score_codex":0.00021485024,"about_ca_topic_score_gemma":0.0001731316,"teacher_disagreement_score":0.0007513314,"about_ca_system_score_codex":0.00021771209,"about_ca_system_score_gemma":0.00018712982,"threshold_uncertainty_score":0.0025134087},"labels":[],"label_agreement":null},{"id":"W2111477060","doi":"10.1007/978-1-4419-6612-4_18","title":"Workshop Summary: Functions of the TNF Family in Infectious Disease","year":2010,"lang":"en","type":"book-chapter","venue":"Advances in experimental medicine and biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Session (web analytics); Immune system; Tumor necrosis factor alpha; Immunology; Infectious disease (medical specialty); Disease; Medicine; Pathology; Computer science; World Wide Web","score_opus":0.015762059172071057,"score_gpt":0.290181878852815,"score_spread":0.2744198196807439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111477060","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0043175807,0.2711526,0.009445838,0.049472753,0.32080102,0.0004011312,0.002193755,0.0006230428,0.3415923],"genre_scores_gemma":[0.006036226,0.06201259,0.0021726748,0.005460075,0.03872366,0.00014351789,0.001310796,0.0001562398,0.88398415],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99980074,0.000021320951,0.000009958519,0.000034418066,0.000099600715,0.00003384645],"domain_scores_gemma":[0.9995491,0.000060335464,0.000018086783,0.000013143453,0.00017119494,0.00018807127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008023627,0.0013322999,0.0006249293,0.00079484895,0.0004622893,0.0016534445,0.001388711,0.0018058951,0.054291077],"category_scores_gemma":[0.0005833508,0.00020958052,0.0005161412,0.000626418,0.00022247809,0.0011264462,0.0010765868,0.0020061038,0.03343651],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088636734,0.000048705013,0.000047718764,0.00033394355,0.0000071715585,0.000084994346,0.000025286463,0.00019460465,0.002613677,0.001640066,0.9027581,0.09215717],"study_design_scores_gemma":[0.000013659284,0.000053914042,0.00021460613,0.0001682289,0.0000058225055,0.00013177881,0.000026519368,0.000081467035,0.00072030013,0.001018727,0.9975585,0.000006451629],"about_ca_topic_score_codex":0.0011662013,"about_ca_topic_score_gemma":0.0032828068,"teacher_disagreement_score":0.054291077,"about_ca_system_score_codex":0.00076012535,"about_ca_system_score_gemma":0.0010051501,"threshold_uncertainty_score":0.18162173},"labels":[],"label_agreement":null},{"id":"W2111602871","doi":"10.1038/sj.bjp.0707443","title":"α‐4/β‐1 and α‐L/β‐2 integrins mediate cytokine induced lung leukocyte‐epithelial adhesion and injury","year":2007,"lang":"en","type":"article","venue":"British Journal of Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Cytokine; Cell adhesion molecule; Lung; Bronchoalveolar lavage; Inflammation; Pathology; Medicine; Immunology; Chemistry; Internal medicine","score_opus":0.008665024960271269,"score_gpt":0.27703831661340056,"score_spread":0.2683732916531293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111602871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.988639,0.0060943626,0.0031491728,0.00027758756,0.000037973557,0.000054226173,0.00008028889,0.000037659076,0.001629693],"genre_scores_gemma":[0.9948744,0.0021874786,0.0013142113,0.0000786581,0.000029219333,0.00005526705,0.000079907455,0.0000035789194,0.0013772579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997925,0.000052819374,0.000016216309,0.000025552063,0.000037039412,0.00007580095],"domain_scores_gemma":[0.9998982,0.000015202332,0.000039388065,0.0000065026484,0.000017439303,0.000023372402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019174148,0.0004386939,0.00021162753,0.00021113918,0.00020325289,0.00041771456,0.00022031985,0.00038629535,0.0016021972],"category_scores_gemma":[0.00018125902,0.000118170545,0.00025857528,0.00009059586,0.00021706829,0.00030216685,0.00023521004,0.00051674887,0.00035281025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003395191,0.000047287667,0.001177625,0.000074116564,0.000006971134,0.00013151646,0.00002014329,0.000057732665,0.9957481,0.00011988628,0.000049683542,0.0022273916],"study_design_scores_gemma":[0.0000822697,0.0013543932,0.031854823,0.000041259456,0.000071956594,0.0011747746,0.0001904611,0.0027425443,0.95851016,0.00026529212,0.0037041444,0.000007840993],"about_ca_topic_score_codex":0.00032156252,"about_ca_topic_score_gemma":0.00023991139,"teacher_disagreement_score":0.0016021972,"about_ca_system_score_codex":0.0003595172,"about_ca_system_score_gemma":0.00020310139,"threshold_uncertainty_score":0.005359888},"labels":[],"label_agreement":null},{"id":"W2111644555","doi":"10.1152/physiolgenomics.00153.2004","title":"DNA microarray analysis of gene expression in alveolar epithelial cells in response to TNFα, LPS, and cyclic stretch","year":2004,"lang":"en","type":"article","venue":"Physiological Genomics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; St. Michael's Hospital","funders":"","keywords":"Biology; Proinflammatory cytokine; Tumor necrosis factor alpha; Gene expression; Signal transduction; Chemokine; Cell biology; Microarray analysis techniques; Inflammation; Molecular biology; Immunology; Gene; Genetics","score_opus":0.011720168663166294,"score_gpt":0.23469189424571058,"score_spread":0.22297172558254427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111644555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9623772,0.00275814,0.021744603,0.00029431493,0.00012924238,0.00022820743,0.009454715,0.00025670876,0.0027568818],"genre_scores_gemma":[0.8579887,0.0058833794,0.08798267,0.00085633,0.00015529426,0.0021108089,0.030650375,0.00009746365,0.014274963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954826,0.0000634085,0.00003283979,0.00012832321,0.00014873479,0.00007844802],"domain_scores_gemma":[0.9997656,0.00008878116,0.00004601884,0.000019821773,0.00005285423,0.000027073058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001992612,0.00032308022,0.0005191101,0.000546521,0.00029798632,0.00035226697,0.00017707492,0.00036536998,0.0012181642],"category_scores_gemma":[0.00027818288,0.0001839178,0.00035154936,0.0009682738,0.00020724702,0.00015176146,0.00013175911,0.00050316146,0.00055799173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011820743,0.000024994137,0.00042451857,0.000044146123,0.000007758884,0.00001857938,0.00002229094,0.00007130163,0.9976037,0.000018779912,0.00004127515,0.0016045553],"study_design_scores_gemma":[0.00002556499,0.00086410646,0.06950521,0.000021410684,0.00008204502,0.00029431036,0.00017472282,0.0031263332,0.92050976,0.00015923494,0.005206604,0.00003076008],"about_ca_topic_score_codex":0.0006071685,"about_ca_topic_score_gemma":0.0010177924,"teacher_disagreement_score":0.0012181642,"about_ca_system_score_codex":0.00025915625,"about_ca_system_score_gemma":0.0002426644,"threshold_uncertainty_score":0.0040751696},"labels":[],"label_agreement":null},{"id":"W2111667226","doi":"10.4049/jimmunol.169.4.2111","title":"Lipopolysaccharide-Induced Leukocyte-Endothelial Cell Interactions: A Role for CD14 Versus Toll-Like Receptor 4 Within Microvessels","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"U.S. Public Health Service","keywords":"CD14; Intravital microscopy; Lipopolysaccharide; TLR4; Biology; Endothelial stem cell; Receptor; Microcirculation; Inflammation; Immunology; Internal medicine; Endocrinology; Immune system; Medicine; In vitro; Biochemistry","score_opus":0.02209580952458294,"score_gpt":0.24828061498612994,"score_spread":0.226184805461547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111667226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965233,0.0011083784,0.001775989,0.000043911477,0.000007799107,0.000015055583,0.00008349171,0.000019158679,0.00042273846],"genre_scores_gemma":[0.9914948,0.0010878171,0.0051037013,0.000063350315,0.000026284395,0.00007061755,0.00026860114,0.000011425617,0.0018734259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979824,0.000060410504,0.000014780222,0.00003715882,0.00003698096,0.000052483258],"domain_scores_gemma":[0.9998128,0.000026532623,0.000078405945,0.000012721754,0.000028405988,0.000041220563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020080093,0.0002974989,0.000268457,0.00035585853,0.00016719666,0.0003214859,0.00018168693,0.00039466535,0.0011000617],"category_scores_gemma":[0.00016351085,0.00016372208,0.00019483338,0.00012660598,0.00019583502,0.00044276874,0.00027654704,0.00044065478,0.00029419854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018049855,0.000017847131,0.0007109672,0.000031145635,0.0000036428862,0.000047417205,0.000012142456,0.000017688919,0.99826056,0.000046430145,0.0000063433167,0.00066525117],"study_design_scores_gemma":[0.000035558613,0.0008203485,0.044715814,0.000019021121,0.000053708754,0.00043893472,0.00014936824,0.0013846571,0.95095026,0.00015808207,0.001263695,0.000010509341],"about_ca_topic_score_codex":0.00014186082,"about_ca_topic_score_gemma":0.00021341514,"teacher_disagreement_score":0.0011000617,"about_ca_system_score_codex":0.00020565592,"about_ca_system_score_gemma":0.000104767525,"threshold_uncertainty_score":0.0036800504},"labels":[],"label_agreement":null},{"id":"W2111919009","doi":"10.1093/embo-reports/kve155","title":"CARD4/Nod1 mediates NF‐κB and JNK activation by invasive Shigella flexneri","year":2001,"lang":"en","type":"article","venue":"EMBO Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":624,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Shigella flexneri; NOD1; NF-κB; Microbiology; Shigella; Biology; Signal transduction; Cell biology; Immunology; Bacteria; Escherichia coli; NOD2; Salmonella; Innate immune system; Immune system; Biochemistry; Genetics; Gene","score_opus":0.007181244065906754,"score_gpt":0.21623455934891386,"score_spread":0.2090533152830071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111919009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556524,0.0011874555,0.001252016,0.0001332076,0.000050302304,0.000022410288,0.0003602733,0.00004130063,0.001387689],"genre_scores_gemma":[0.99519205,0.00055113976,0.0009464665,0.000068743226,0.000023748324,0.000053871412,0.0009274213,0.000013169516,0.0022234702],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995857,0.000059425456,0.000034201665,0.000044627977,0.00006460669,0.0002114303],"domain_scores_gemma":[0.99975985,0.000027598968,0.00006710194,0.000045556935,0.00003381274,0.000066043795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043901667,0.00094257604,0.00044935828,0.0003301499,0.00037584125,0.00052153337,0.0004406231,0.0005447673,0.0021535298],"category_scores_gemma":[0.00031657782,0.00035375345,0.0006262142,0.00016619243,0.00047551127,0.00081402797,0.0010044493,0.00093390886,0.000928729],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085011654,0.000049410188,0.00061628595,0.00012766536,0.000008499187,0.00022362254,0.000049023525,0.00008654838,0.9967637,0.00016098203,0.00010740829,0.0009567479],"study_design_scores_gemma":[0.00013217787,0.00046174353,0.04722135,0.000029804796,0.0000428341,0.0009013077,0.0005876908,0.0016346812,0.9462972,0.00040581074,0.002260585,0.000024743094],"about_ca_topic_score_codex":0.0006390315,"about_ca_topic_score_gemma":0.00063880044,"teacher_disagreement_score":0.0021535298,"about_ca_system_score_codex":0.0006208494,"about_ca_system_score_gemma":0.00028258152,"threshold_uncertainty_score":0.0072042346},"labels":[],"label_agreement":null},{"id":"W2112269300","doi":"10.1128/jvi.80.7.3515-3522.2006","title":"Tumor Necrosis Factor Alpha Enhances Influenza A Virus-Induced Expression of Antiviral Cytokines by Activating RIG-I Gene Expression","year":2006,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Academy of Finland","keywords":"Biology; Sendai virus; RIG-I; TLR3; Molecular biology; Tumor necrosis factor alpha; Gene expression; Interferon; IRF3; Mononegavirales; Virus; Paramyxoviridae; Virology; Innate immune system; Gene; Toll-like receptor; Immune system; Immunology","score_opus":0.011794442968756686,"score_gpt":0.25685775222470886,"score_spread":0.24506330925595218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112269300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953696,0.0017155343,0.0010013931,0.00005508607,0.000032062795,0.00002514126,0.00017189044,0.00004052765,0.001588704],"genre_scores_gemma":[0.99550265,0.0011923527,0.0010466254,0.000037667,0.00001427889,0.000023764369,0.00035455945,0.000010846234,0.0018173243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986124,0.00003055896,0.000016202384,0.00001745701,0.000030834108,0.000043665532],"domain_scores_gemma":[0.99988985,0.000029483428,0.000025306497,0.000018849643,0.000015035845,0.000021485417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001561529,0.00029244932,0.00017922491,0.00015190637,0.00007432156,0.00025754044,0.00008055239,0.00013441566,0.000991837],"category_scores_gemma":[0.00013284988,0.00010349949,0.00032842238,0.000100082136,0.00016446624,0.00014797683,0.00013099595,0.000333479,0.0005098714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016762085,0.00003365262,0.00017313164,0.000022027998,0.000002925133,0.000041810606,0.000011998982,0.000042334126,0.9987608,0.000022515866,0.00001725966,0.0007038517],"study_design_scores_gemma":[0.000026669124,0.0006746282,0.0042990344,0.000008078042,0.000015188653,0.00019144228,0.000041975953,0.00078123825,0.99242556,0.000034209075,0.0014987707,0.0000032121693],"about_ca_topic_score_codex":0.00033265183,"about_ca_topic_score_gemma":0.00032734734,"teacher_disagreement_score":0.000991837,"about_ca_system_score_codex":0.00015559257,"about_ca_system_score_gemma":0.00014448357,"threshold_uncertainty_score":0.0033180714},"labels":[],"label_agreement":null},{"id":"W2112663666","doi":"10.1093/infdis/jir276","title":"A Modulatory Interleukin-10 Response to Staphylococcal Peptidoglycan Prevents Th1/Th17 Adaptive Immunity to Staphylococcus aureus","year":2011,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":98,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Staphylococcus aureus; Peptidoglycan; Microbiology; Immunity; Acquired immune system; Staphylococcal infections; Immunology; Immune system; Interleukin; Biology; Chemistry; Cytokine; Bacteria","score_opus":0.014672827480196585,"score_gpt":0.2395909117811811,"score_spread":0.22491808430098453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112663666","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967872,0.0010826724,0.0007565938,0.00012427405,0.000056672066,0.00001209572,0.00007807696,0.00003332456,0.0010692389],"genre_scores_gemma":[0.99715084,0.00048834016,0.0005572039,0.000108494736,0.000028888187,0.000020023777,0.00010226312,0.000009628289,0.0015343177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980754,0.000038492337,0.000017887749,0.00002702518,0.000036990088,0.000072152005],"domain_scores_gemma":[0.99980396,0.000033459924,0.000036595775,0.000030341509,0.00002049445,0.00007511258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019852632,0.00019916319,0.00024404773,0.0000894339,0.0000978661,0.0002899106,0.00013476601,0.00020461263,0.001835769],"category_scores_gemma":[0.00020541565,0.00013428126,0.00015429952,0.00005258388,0.00026290148,0.00011675768,0.0001821737,0.0007247097,0.0005274543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044785094,0.000055271707,0.00061081996,0.000045195728,0.0000039135484,0.00007259954,0.000015210218,0.000037238555,0.99634176,0.00010608105,0.00011369574,0.0021502916],"study_design_scores_gemma":[0.00011090004,0.0015419121,0.017834244,0.000027742573,0.000021908143,0.0006814943,0.00007760943,0.0007192072,0.97497547,0.00018649345,0.0038185243,0.000004642142],"about_ca_topic_score_codex":0.00023633716,"about_ca_topic_score_gemma":0.00042139046,"teacher_disagreement_score":0.001835769,"about_ca_system_score_codex":0.00017363369,"about_ca_system_score_gemma":0.00027977157,"threshold_uncertainty_score":0.0061412454},"labels":[],"label_agreement":null},{"id":"W2112950614","doi":"10.1016/s0969-2126(00)00143-x","title":"A conserved structural motif for lipopolysaccharide recognition by procaryotic and eucaryotic proteins","year":2000,"lang":"en","type":"article","venue":"Structure","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":206,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Medical Research Council Canada; Deutsche Forschungsgemeinschaft; Deutscher Akademischer Austauschdienst; North Atlantic Treaty Organization","keywords":"Lipopolysaccharide; Bacterial outer membrane; Lipid A; Innate immune system; Chemistry; Escherichia coli; Cell biology; Biochemistry; Plasma protein binding; Protein structure; Biophysics; Biology; Receptor; Gene; Immunology","score_opus":0.006906108697215097,"score_gpt":0.21133067290650492,"score_spread":0.20442456420928984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2112950614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97458106,0.0028322418,0.020390866,0.00012633031,0.00011052446,0.00006542864,0.00029453996,0.00019110467,0.0014078859],"genre_scores_gemma":[0.97829115,0.00081689045,0.017423032,0.00015446213,0.00006208683,0.000049302445,0.0009463591,0.00003459118,0.0022222768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998696,0.000022153208,0.000013856132,0.000030882893,0.000038098497,0.000025400426],"domain_scores_gemma":[0.9996339,0.00004392836,0.00010389036,0.000045825964,0.000053518066,0.000118894684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019289527,0.00045287432,0.0005947293,0.00025289293,0.00051328965,0.00043559467,0.00044391066,0.00044442274,0.0008398647],"category_scores_gemma":[0.0003768586,0.00018742016,0.00045785264,0.00029006903,0.0003145975,0.00045109793,0.00042549358,0.0006907531,0.0006988961],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044734677,0.000027225009,0.0005022513,0.000095360236,0.0000134333295,0.0003919887,0.000051236668,0.00016067665,0.9925889,0.0010872415,0.000120343895,0.004513826],"study_design_scores_gemma":[0.00007947208,0.0011203432,0.028154418,0.000056037843,0.00006745275,0.0054802387,0.00016320303,0.0028855798,0.9491467,0.0011121363,0.011674879,0.000059554208],"about_ca_topic_score_codex":0.0003418928,"about_ca_topic_score_gemma":0.00043662984,"teacher_disagreement_score":0.0008398647,"about_ca_system_score_codex":0.00038511062,"about_ca_system_score_gemma":0.00035104097,"threshold_uncertainty_score":0.0028095841},"labels":[],"label_agreement":null},{"id":"W2113234505","doi":"10.1136/gut.51.6.842","title":"Lipopolysaccharide modulation of normal enterocyte turnover by toll-like receptors is mediated by endogenously produced tumour necrosis factor α","year":2002,"lang":"en","type":"article","venue":"Gut","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal; Université de Sherbrooke","funders":"Rheinische Friedrich-Wilhelms-Universität Bonn; Institut National de la Santé et de la Recherche Médicale; Deutsche Forschungsgemeinschaft","keywords":"Biology; Tumor necrosis factor alpha; Lipopolysaccharide; Cytokine; TLR4; Cell biology; Receptor; Toll-like receptor; Signal transduction; Immunology; Innate immune system; Biochemistry","score_opus":0.012690006942978425,"score_gpt":0.2050292424564634,"score_spread":0.19233923551348497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113234505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99005646,0.006318336,0.0025791472,0.000058789938,0.000023320837,0.000021494143,0.00013834525,0.000031310647,0.0007727184],"genre_scores_gemma":[0.9957443,0.0018775112,0.0013704251,0.000029179022,0.000013689961,0.000029635132,0.00015927947,0.000007853831,0.0007681614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979645,0.000057077825,0.000021023005,0.000030730567,0.000042288113,0.000052431235],"domain_scores_gemma":[0.999782,0.000038474875,0.00008650773,0.000027237847,0.000031937274,0.00003377491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021603159,0.0002831916,0.00021528579,0.00017018028,0.00006558986,0.00032339917,0.00012180211,0.00016962153,0.0016883581],"category_scores_gemma":[0.00021529688,0.000100734935,0.00026902786,0.000083214574,0.0002336929,0.00022558318,0.00017743475,0.00037436534,0.00046524213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006127561,0.000027165981,0.0007447217,0.000088068155,0.000004714877,0.00007933549,0.000011949173,0.000026170252,0.99680173,0.00003841612,0.00001159137,0.0015533713],"study_design_scores_gemma":[0.000058849873,0.0012667511,0.026840864,0.000024855684,0.00002709288,0.0007757364,0.0000675001,0.00064872,0.9683072,0.00009679007,0.0018791271,0.0000064475566],"about_ca_topic_score_codex":0.000076302895,"about_ca_topic_score_gemma":0.00008421267,"teacher_disagreement_score":0.0016883581,"about_ca_system_score_codex":0.00019847428,"about_ca_system_score_gemma":0.0001100007,"threshold_uncertainty_score":0.005648136},"labels":[],"label_agreement":null},{"id":"W2113285011","doi":"10.1084/jem.20032246","title":"The Molecular Adapter Carma1 Controls Entry of IκB Kinase into the Central Immune Synapse","year":2004,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Immunological synapse; Biology; Cell biology; Lipid raft; Immune system; T cell; Signal transducing adaptor protein; Scaffold protein; T-cell receptor; Signal transduction; Immunology","score_opus":0.005629725141346293,"score_gpt":0.24734398060904703,"score_spread":0.24171425546770073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113285011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99432963,0.0013922136,0.0024076626,0.00006462171,0.000021753836,0.000014590662,0.000100406236,0.00013955761,0.001529604],"genre_scores_gemma":[0.9978331,0.00033124033,0.0008621408,0.000021305306,0.0000071756726,0.000015786776,0.000096944874,0.00002094086,0.00081138255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997595,0.000026609685,0.000011941378,0.000059866197,0.00003437302,0.00010780038],"domain_scores_gemma":[0.99967957,0.0000447057,0.00008751198,0.000038376103,0.000042151114,0.00010774397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018963782,0.00036094894,0.00029008643,0.0003368311,0.00034405163,0.0006453112,0.00029705733,0.00031180354,0.0013633216],"category_scores_gemma":[0.0002791899,0.0001722656,0.00018990219,0.00013459996,0.00048626654,0.000501467,0.00045217574,0.00074826396,0.000711512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014785407,0.000014242023,0.00021160804,0.000016766568,0.0000016276995,0.000056531662,0.00001766153,0.00006835565,0.9982912,0.00025243362,0.000022207942,0.0008995062],"study_design_scores_gemma":[0.000029894816,0.00013707137,0.00559969,0.0000062411023,0.000012306259,0.0002888074,0.00007366995,0.0023063535,0.98985356,0.0002500743,0.0014362985,0.00000615027],"about_ca_topic_score_codex":0.0004021512,"about_ca_topic_score_gemma":0.00042251393,"teacher_disagreement_score":0.0013633216,"about_ca_system_score_codex":0.0006748475,"about_ca_system_score_gemma":0.00032258933,"threshold_uncertainty_score":0.0048963428},"labels":[],"label_agreement":null},{"id":"W2113603708","doi":"10.4049/jimmunol.175.9.5690","title":"Regulation of B7.1 Costimulatory Molecule Is Mediated by the IFN Regulatory Factor-7 through the Activation of JNK in Lipopolysaccharide-Stimulated Human Monocytic Cells","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa","funders":"","keywords":"Lipopolysaccharide; Cell biology; Chemistry; Immunology; Biology","score_opus":0.013646486727510634,"score_gpt":0.25032659255132167,"score_spread":0.23668010582381105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113603708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849828,0.007985968,0.0037958315,0.00024471496,0.000093195194,0.0000536585,0.0007027571,0.00006149444,0.0020795683],"genre_scores_gemma":[0.9862012,0.0044794986,0.005103211,0.00013103997,0.00005695921,0.00010910797,0.0014527341,0.000020520341,0.0024456887],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975187,0.000050855677,0.000020356913,0.00003609614,0.00007952538,0.00006129003],"domain_scores_gemma":[0.9999068,0.000011908767,0.000021946984,0.000008334379,0.000026387566,0.000024751831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001654709,0.0004083957,0.0002466652,0.00041516218,0.0002808976,0.00032941325,0.00013928673,0.00023832801,0.0011886163],"category_scores_gemma":[0.00011647512,0.00021705711,0.0003563,0.0001608713,0.00020587702,0.000159204,0.00022717242,0.00056082406,0.00070056523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011993072,0.000016591252,0.00019719696,0.00004522451,0.0000036288684,0.00006291317,0.000016774598,0.000029440898,0.9985141,0.000083915795,0.000044586897,0.0008657317],"study_design_scores_gemma":[0.000060147715,0.0002500206,0.014322112,0.00003257348,0.000030413028,0.0003663884,0.00009032351,0.0015929566,0.97836417,0.00018382905,0.0046959124,0.000011087685],"about_ca_topic_score_codex":0.0006304324,"about_ca_topic_score_gemma":0.00071510056,"teacher_disagreement_score":0.0011886163,"about_ca_system_score_codex":0.00035258915,"about_ca_system_score_gemma":0.0002516571,"threshold_uncertainty_score":0.0039762855},"labels":[],"label_agreement":null},{"id":"W2113610600","doi":"10.1164/rccm.200807-1020oc","title":"Deleterious Role of TLR3 during Hyperoxia-induced Acute Lung Injury","year":2008,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital","funders":"","keywords":"ARDS; Hyperoxia; Medicine; Inflammation; Lung; Immunology; TLR3; Diffuse alveolar damage; Cancer research; Innate immune system; Immune system; Internal medicine; Toll-like receptor; Acute respiratory distress","score_opus":0.008993775564822594,"score_gpt":0.27249600741908236,"score_spread":0.26350223185425975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113610600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937908,0.002393227,0.0023267483,0.00023829978,0.000046570833,0.000042219548,0.0003558163,0.00006670753,0.0007396351],"genre_scores_gemma":[0.99698335,0.0007668559,0.0010203851,0.00012735518,0.000019743326,0.00005725427,0.00037414243,0.000007901281,0.0006429608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980634,0.0000428129,0.000023746888,0.000027719985,0.000042374282,0.00005700767],"domain_scores_gemma":[0.9998198,0.000019611478,0.00008098129,0.000017992814,0.00002369409,0.000037987797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029343885,0.0004159041,0.00023601583,0.00024096774,0.00019791682,0.00032328142,0.0002451181,0.00058401085,0.0018444784],"category_scores_gemma":[0.0002118072,0.00010812831,0.00041374742,0.00013007151,0.0002973078,0.0002396334,0.0003232651,0.00069291436,0.0004944927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010074953,0.00004848223,0.0021125542,0.00010931591,0.000012365522,0.0002966325,0.000017521681,0.000064657994,0.99487644,0.00007054204,0.0000664775,0.0013176105],"study_design_scores_gemma":[0.00009455662,0.001993222,0.06020564,0.00006218681,0.00008493641,0.0049542263,0.00015677448,0.001351779,0.92866164,0.0002829756,0.002136022,0.000016112343],"about_ca_topic_score_codex":0.00022421019,"about_ca_topic_score_gemma":0.00031107725,"teacher_disagreement_score":0.0018444784,"about_ca_system_score_codex":0.00027660796,"about_ca_system_score_gemma":0.00020220944,"threshold_uncertainty_score":0.0061703324},"labels":[],"label_agreement":null},{"id":"W2113953901","doi":"10.1016/j.molimm.2009.09.001","title":"Role of alveolar epithelial early growth response-1 (Egr-1) in CD8+ T cell-mediated lung injury","year":2009,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Laurentian University","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; Yale University","keywords":"Lung; CD8; Medicine; Chemistry; Internal medicine; Immunology; Immune system","score_opus":0.0021634146343931385,"score_gpt":0.1990570683323089,"score_spread":0.19689365369791575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2113953901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9355202,0.05041357,0.004831098,0.0022153114,0.00034163977,0.00006136208,0.0002515922,0.0001897025,0.0061756424],"genre_scores_gemma":[0.98613364,0.006560695,0.0021243915,0.00023111161,0.00014753414,0.00003874643,0.00013675186,0.000017079357,0.00460995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981004,0.000056465073,0.000012210228,0.000026510874,0.000029311606,0.00006550094],"domain_scores_gemma":[0.99989045,0.0000141131095,0.000031086365,0.000012877662,0.00001877094,0.000032667333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040378858,0.0007052197,0.0003928875,0.0004579288,0.0003126933,0.0006000601,0.00039226495,0.00079368596,0.0013036856],"category_scores_gemma":[0.00016907282,0.00019702132,0.00032103076,0.00012315054,0.0004326781,0.0006214995,0.00040072703,0.0013424814,0.0005324797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021638349,0.0003469106,0.0023733913,0.00049344887,0.000046193072,0.0011633832,0.000095880634,0.0007205612,0.96033114,0.0020443604,0.0010063099,0.029214516],"study_design_scores_gemma":[0.00037230935,0.002363353,0.042449284,0.0001987766,0.00024941444,0.0038070902,0.0007125878,0.006228082,0.92126155,0.0033875366,0.018936409,0.00003359801],"about_ca_topic_score_codex":0.00024086575,"about_ca_topic_score_gemma":0.0003179871,"teacher_disagreement_score":0.0013036856,"about_ca_system_score_codex":0.00042568817,"about_ca_system_score_gemma":0.00030932325,"threshold_uncertainty_score":0.0043612123},"labels":[],"label_agreement":null},{"id":"W2114113329","doi":"10.1002/jps.20267","title":"Down‐regulation of aryl hydrocarbon receptor–regulated genes by tumor necrosis factor‐α and lipopolysaccharide in murine hepatoma hepa 1c1c7 cells","year":2004,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Aryl hydrocarbon receptor; Lipopolysaccharide; Tumor necrosis factor alpha; Chemistry; Gene; Aryl; Cell biology; Receptor; Microbiology; Biochemistry; Biology; Immunology; Transcription factor; Organic chemistry","score_opus":0.016529919482256086,"score_gpt":0.28100142384826265,"score_spread":0.2644715043660066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114113329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99358,0.0015307569,0.0013864991,0.0002069266,0.00012499193,0.00003561488,0.0012982244,0.00012496047,0.0017119878],"genre_scores_gemma":[0.98966974,0.0012002242,0.0014679884,0.00012843504,0.000044246073,0.00009209422,0.0026459394,0.000038444956,0.004712994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999671,0.000052998625,0.000040096827,0.00004457275,0.00007707336,0.00011434752],"domain_scores_gemma":[0.99967885,0.000099211196,0.00005041756,0.00006521494,0.0000411027,0.00006516029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020350495,0.0005023056,0.00046425176,0.00051320455,0.0002712565,0.00045337173,0.00020559083,0.0003022242,0.002033276],"category_scores_gemma":[0.00013350006,0.00023842324,0.00071226916,0.0004571934,0.00039273174,0.0002538002,0.00021025364,0.0010775026,0.0008253956],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035778002,0.00006334002,0.00014322232,0.000027678594,0.0000058993887,0.0000763505,0.000024446783,0.00004917754,0.9987525,0.00008583834,0.000051934454,0.0003618585],"study_design_scores_gemma":[0.000046637168,0.00051505794,0.00529746,0.00000531848,0.000022653638,0.00011807866,0.00007613305,0.000668654,0.9917264,0.000048740207,0.0014669993,0.000007819471],"about_ca_topic_score_codex":0.001365963,"about_ca_topic_score_gemma":0.0013327892,"teacher_disagreement_score":0.002033276,"about_ca_system_score_codex":0.00034126313,"about_ca_system_score_gemma":0.0003349606,"threshold_uncertainty_score":0.006801963},"labels":[],"label_agreement":null},{"id":"W2114347295","doi":"10.1016/s1471-4906(02)02298-6","title":"IRAK-4 as the central TIR signaling mediator in innate immunity","year":2002,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":217,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute","keywords":"Innate immune system; Signal transducing adaptor protein; Biology; Signal transduction; Proinflammatory cytokine; Cell biology; Receptor; Immunology; Mediator; Tumor necrosis factor alpha; Inflammation; Genetics","score_opus":0.03724098922774456,"score_gpt":0.3065067984287829,"score_spread":0.2692658092010384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114347295","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041419288,0.9941987,0.0009445101,0.00080473314,0.0017057577,0.000007704108,0.000023531375,0.000028763983,0.0018720466],"genre_scores_gemma":[0.0025432075,0.990774,0.000962277,0.0008096032,0.0014798127,0.000012741038,0.00007993531,0.0000050330564,0.0033333767],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981374,0.00002184363,0.000026352169,0.000044421915,0.00007138949,0.000022253247],"domain_scores_gemma":[0.9997223,0.000056099012,0.000046103032,0.000012122038,0.000109376284,0.0000539886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009566097,0.0013484553,0.0016829858,0.0010387182,0.00036843386,0.0015796061,0.0018894919,0.0017721588,0.0025879769],"category_scores_gemma":[0.00052473735,0.00034388405,0.00035034123,0.0014318745,0.000994233,0.0025101856,0.0007929894,0.003072903,0.004574335],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005181559,0.00008307906,0.00029618136,0.006750671,0.000084698826,0.0006479368,0.00005581746,0.00060338335,0.014316447,0.0060516056,0.04689185,0.92370015],"study_design_scores_gemma":[0.00005872,0.00009594571,0.00075590605,0.0006883174,0.00009510975,0.001582597,0.000060889517,0.00020231958,0.0026237203,0.0035930402,0.99021775,0.000025595855],"about_ca_topic_score_codex":0.0006145973,"about_ca_topic_score_gemma":0.0008812572,"teacher_disagreement_score":0.0025879769,"about_ca_system_score_codex":0.0010544513,"about_ca_system_score_gemma":0.0012202145,"threshold_uncertainty_score":0.008657634},"labels":[],"label_agreement":null},{"id":"W2114378787","doi":"10.1093/toxsci/kfr283","title":"The Dysregulation of the Monocyte/Macrophage Effector Function Induced by Isopropanol Is Mediated by the Defective Activation of Distinct Members of the AP-1 Family of Transcription Factors","year":2011,"lang":"en","type":"article","venue":"Toxicological Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"NFAT; Monocyte; Kinase; Tumor necrosis factor alpha; Cytokine; JUNB; p38 mitogen-activated protein kinases; Lipopolysaccharide; Cell biology; Signal transduction; Protein kinase A; Activator (genetics); Chemistry; Biology; Endocrinology; Receptor; Immunology; Transcription factor; Biochemistry","score_opus":0.034095988275938544,"score_gpt":0.23736627231658647,"score_spread":0.20327028404064792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114378787","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99453837,0.002640183,0.002221395,0.000072812785,0.000022229548,0.000025710578,0.00014880703,0.000018933471,0.00031162763],"genre_scores_gemma":[0.9964708,0.0014728756,0.0010825363,0.00003325824,0.000012127578,0.000026324793,0.00017294666,0.0000033755425,0.00072575157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999821,0.000038344213,0.000019139432,0.000025909238,0.00005449749,0.000041103565],"domain_scores_gemma":[0.9998847,0.000015716663,0.00004557723,0.000015766218,0.000020051028,0.000018217794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016339472,0.00045021408,0.00020882135,0.00020856327,0.000103841536,0.00022718303,0.00014107034,0.0001922669,0.0008800132],"category_scores_gemma":[0.0001139157,0.00008558726,0.00023051421,0.0001325266,0.00025682957,0.00020711625,0.00021571749,0.00045388783,0.0002111609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118046075,0.000016866115,0.00031197243,0.000037899612,0.000003307815,0.0000686393,0.000015306856,0.000011350122,0.9985915,0.00001974101,0.0000045330594,0.0008007612],"study_design_scores_gemma":[0.000007039404,0.00043659727,0.010677795,0.0000063588923,0.000019284003,0.00044268084,0.000061833525,0.00011685118,0.98738873,0.000055137192,0.0007841596,0.000003462361],"about_ca_topic_score_codex":0.0002228341,"about_ca_topic_score_gemma":0.00022858077,"teacher_disagreement_score":0.0008800132,"about_ca_system_score_codex":0.00015125006,"about_ca_system_score_gemma":0.00011883147,"threshold_uncertainty_score":0.002943933},"labels":[],"label_agreement":null},{"id":"W2114820240","doi":"10.4049/jimmunol.1002320","title":"TLR1/TLR2 Agonist Induces Tumor Regression by Reciprocal Modulation of Effector and Regulatory T Cells","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Agonist; Effector; TLR2; Reciprocal; Regression; Modulation (music); Chemistry; Regression analysis; Cancer research; Cell biology; Internal medicine; Receptor; Biology; Medicine; Mathematics; Biochemistry; Physics; Statistics; Innate immune system; Philosophy","score_opus":0.011502858785796008,"score_gpt":0.2161074538884805,"score_spread":0.20460459510268447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114820240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99186134,0.002287616,0.0036253966,0.00011641484,0.00004778348,0.000043541306,0.00015480888,0.00009911302,0.0017640647],"genre_scores_gemma":[0.99497116,0.00091718516,0.0022202604,0.00008173378,0.00003256433,0.000049260365,0.00023813636,0.000012588742,0.0014770346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998016,0.000057267534,0.000017235352,0.000034241137,0.000037953032,0.000051787112],"domain_scores_gemma":[0.999933,0.000012835332,0.00002162958,0.000010502331,0.0000055529017,0.000016443355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019499786,0.0004669188,0.00025844589,0.00021902254,0.00009833102,0.00021556906,0.00012687052,0.00025584173,0.00110201],"category_scores_gemma":[0.000081326296,0.000098473734,0.00021140669,0.000121797246,0.00017618416,0.00017141929,0.00021088205,0.0008244456,0.00033527502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013503885,0.00008004077,0.00011121624,0.000039671035,0.0000035717826,0.000031915748,0.0000065723457,0.000049846207,0.9975715,0.00004356928,0.000024008199,0.0019030115],"study_design_scores_gemma":[0.000041403182,0.0012600792,0.0015026914,0.000005643738,0.000017424534,0.00025851314,0.000015602043,0.00051488145,0.9947694,0.00003751766,0.001573964,0.0000028342931],"about_ca_topic_score_codex":0.00006772774,"about_ca_topic_score_gemma":0.00018999926,"teacher_disagreement_score":0.00110201,"about_ca_system_score_codex":0.00010512559,"about_ca_system_score_gemma":0.00015454895,"threshold_uncertainty_score":0.0036865473},"labels":[],"label_agreement":null},{"id":"W2114913546","doi":"10.1128/jvi.79.15.9608-9617.2005","title":"Gene Expression and Antiviral Activity of Alpha/Beta Interferons and Interleukin-29 in Virus-Infected Human Myeloid Dendritic Cells","year":2005,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":184,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Medical Research Council; Academy of Finland","keywords":"Biology; Sendai virus; IRF3; Interferon; Influenza A virus; Virology; IRF7; Interferon regulatory factors; Virus; Molecular biology; Immunology; Innate immune system; Immune system","score_opus":0.00906829489009642,"score_gpt":0.2484098282795576,"score_spread":0.23934153338946118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114913546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963018,0.0015155745,0.0010298644,0.000028979017,0.000012838493,0.000021940552,0.00040597015,0.000007717828,0.00067544513],"genre_scores_gemma":[0.9952518,0.0009922232,0.0017378632,0.00003386864,0.000012985622,0.00003589517,0.0006859914,0.000004502694,0.001244969],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999192,0.000013749889,0.000008527183,0.000019546464,0.00001978572,0.000019124762],"domain_scores_gemma":[0.999949,0.000011233642,0.0000102185495,0.000007527166,0.0000113173555,0.000010693395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010665329,0.00012957164,0.00010168063,0.00011835504,0.00008325466,0.00017932011,0.000040235416,0.000120122386,0.0006571283],"category_scores_gemma":[0.00011595516,0.00008040427,0.00015484898,0.00007846183,0.00009112178,0.000100273,0.000076954704,0.00022933478,0.0002835009],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016820092,0.00001759582,0.0012213583,0.000023942433,0.0000028429781,0.000045074652,0.000015190433,0.00003918178,0.9971623,0.000050194616,0.0000183124,0.0012358896],"study_design_scores_gemma":[0.000026685444,0.0005057359,0.027672047,0.00000915023,0.000020605145,0.0006000484,0.00006015997,0.000923286,0.96743137,0.0000948107,0.0026514113,0.0000046133623],"about_ca_topic_score_codex":0.00026134626,"about_ca_topic_score_gemma":0.00022999785,"teacher_disagreement_score":0.0006571283,"about_ca_system_score_codex":0.00014806856,"about_ca_system_score_gemma":0.00013548537,"threshold_uncertainty_score":0.0021983385},"labels":[],"label_agreement":null},{"id":"W2114942352","doi":"10.1080/10739680490517712","title":"Pentastarch in a Balanced Solution Reduces Hepatic Leukocyte Recruitment in Early Sepsis","year":2004,"lang":"en","type":"article","venue":"Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Sepsis; Intravital microscopy; Saline; Microcirculation; Perforation; Perfusion; Adhesion; Medicine; Immunology; Chemistry; Internal medicine; Materials science","score_opus":0.032223292559217576,"score_gpt":0.2785425120212876,"score_spread":0.24631921946207003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2114942352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972663,0.0012713954,0.0007448155,0.000096429634,0.0000397638,0.00003219495,0.00009419962,0.000056966946,0.00039801572],"genre_scores_gemma":[0.99461126,0.0015191536,0.0015802477,0.00009675395,0.000020472919,0.000038805156,0.00020125908,0.000017191427,0.0019148452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989295,0.000024146506,0.000014263391,0.00001409055,0.0000304051,0.000024075363],"domain_scores_gemma":[0.99989545,0.000010618892,0.00004436767,0.0000052665982,0.000012030728,0.000032309577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010690347,0.00040482768,0.00038618819,0.00017890322,0.000078674384,0.00023834393,0.00018600927,0.00025919854,0.0011036925],"category_scores_gemma":[0.00022533146,0.00010197309,0.00013911074,0.00009264791,0.00016890671,0.00027421588,0.00020046996,0.0003958332,0.00017985232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020213088,0.00015510664,0.00014944696,0.00006874786,0.000009700323,0.00004390051,0.0000121687535,0.00011808367,0.99473816,0.000027762955,0.000048396967,0.002607182],"study_design_scores_gemma":[0.00026486604,0.012966377,0.0046120393,0.000037239653,0.00005917196,0.00029705602,0.00006565693,0.0007902299,0.97887635,0.000041766933,0.001978416,0.000010918075],"about_ca_topic_score_codex":0.00040867628,"about_ca_topic_score_gemma":0.0006778267,"teacher_disagreement_score":0.0011036925,"about_ca_system_score_codex":0.00016535688,"about_ca_system_score_gemma":0.00028610078,"threshold_uncertainty_score":0.0036922693},"labels":[],"label_agreement":null},{"id":"W2115291659","doi":"10.1053/j.gastro.2010.04.043","title":"Loss of Single Immunoglobulin Interlukin-1 Receptor-Related Molecule Leads to Enhanced Colonic Polyposis in Apcmin Mice","year":2010,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":57,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Case Western Reserve University","keywords":"Adenomatous polyposis coli; PI3K/AKT/mTOR pathway; Cancer research; Carcinogenesis; Biology; Proinflammatory cytokine; Receptor; Loss of heterozygosity; Immune system; Familial adenomatous polyposis; Signal transduction; Colorectal cancer; Immunology; Inflammation; Cancer; Cell biology; Gene; Genetics","score_opus":0.00438238520669602,"score_gpt":0.2150616766335574,"score_spread":0.2106792914268614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115291659","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99430484,0.000617923,0.0023804496,0.00026745896,0.000086482134,0.000040421415,0.0009995037,0.0003226005,0.0009802518],"genre_scores_gemma":[0.9905033,0.0005075114,0.0027879137,0.00012686392,0.000050972438,0.00007140044,0.00073275535,0.00023063249,0.004988668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999286,0.00011881715,0.000109616594,0.00018300724,0.00014074406,0.0001619673],"domain_scores_gemma":[0.9982571,0.00026582435,0.0006714759,0.00015067926,0.000043717548,0.0006111835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032015296,0.001284934,0.00067017355,0.0016094919,0.00038205672,0.00080044655,0.00052003574,0.0015023357,0.0050365245],"category_scores_gemma":[0.000413066,0.0007536178,0.0007049116,0.00041901073,0.0010080683,0.00066173874,0.0005956804,0.0029658335,0.0014600827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006084188,0.000085489446,0.00011852983,0.000029936784,0.000008186627,0.0002538395,0.000014681432,0.00009226993,0.9982338,0.00014418691,0.000040938252,0.00036966873],"study_design_scores_gemma":[0.0002222258,0.00081822585,0.005952192,0.000018609508,0.000050074894,0.0022757507,0.00010505136,0.0020774973,0.9867177,0.00020709596,0.0015342095,0.00002132067],"about_ca_topic_score_codex":0.0005450639,"about_ca_topic_score_gemma":0.0007861594,"teacher_disagreement_score":0.0050365245,"about_ca_system_score_codex":0.0006263016,"about_ca_system_score_gemma":0.00036793033,"threshold_uncertainty_score":0.016848862},"labels":[],"label_agreement":null},{"id":"W2115659051","doi":"10.1186/1750-9378-7-36","title":"Toll-like receptor 3 in Epstein-Barr virus-associated nasopharyngeal carcinomas: consistent expression and cytotoxic effects of its synthetic ligand poly(A:U) combined to a Smac-mimetic","year":2012,"lang":"en","type":"article","venue":"Infectious Agents and Cancer","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondation Gustave Roussy; Institut Gustave-Roussy; Assistance publique-Hôpitaux de Paris; Institut National Du Cancer; Centre National de la Recherche Scientifique; University of Toronto","keywords":"Nasopharyngeal carcinoma; Cancer research; Clonogenic assay; Medicine; Cell culture; Cytotoxic T cell; MTT assay; Apoptosis; Biology; Immunology; In vitro; Internal medicine; Radiation therapy","score_opus":0.008890965067888943,"score_gpt":0.23855911759584653,"score_spread":0.22966815252795758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115659051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574465,0.0020954558,0.0013412879,0.000038850263,0.000023249004,0.000021031205,0.00010692084,0.000019376314,0.0006091954],"genre_scores_gemma":[0.99663097,0.0010069417,0.0014545422,0.000017590035,0.000009655471,0.000032986034,0.00018968941,0.0000076423175,0.0006500814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998318,0.00004772257,0.000021422791,0.000026032936,0.000041324,0.000031663458],"domain_scores_gemma":[0.999882,0.000035013196,0.000022684982,0.000018565102,0.00002114729,0.000020703643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024987612,0.00023513514,0.00020241893,0.00019069077,0.000156384,0.00020621768,0.00013348987,0.0002585802,0.00072821137],"category_scores_gemma":[0.0001533625,0.000101496466,0.0002903136,0.00017500279,0.00023100263,0.00017942769,0.00012634488,0.00041516474,0.00022015227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016720613,0.000038831142,0.00017943219,0.000057883506,0.000005795435,0.000039564402,0.000014512019,0.00006520468,0.99844885,0.000017027443,0.00001404923,0.0009515945],"study_design_scores_gemma":[0.000009075446,0.00058916333,0.001707329,0.0000030084286,0.00001495221,0.00017377973,0.000020242303,0.000329643,0.99665594,0.000010162214,0.00048472334,0.0000019915792],"about_ca_topic_score_codex":0.00034210438,"about_ca_topic_score_gemma":0.0004057012,"teacher_disagreement_score":0.00072821137,"about_ca_system_score_codex":0.00019481333,"about_ca_system_score_gemma":0.00017390525,"threshold_uncertainty_score":0.002436161},"labels":[],"label_agreement":null},{"id":"W2115904774","doi":"10.4049/jimmunol.168.9.4650","title":"Profound Differences in Leukocyte-Endothelial Cell Responses to Lipopolysaccharide Versus Lipoteichoic Acid","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipoteichoic acid; Lipopolysaccharide; Microbiology; Biology; Immunology; Cell biology; Bacteria; Genetics; Staphylococcus aureus","score_opus":0.02866900332793851,"score_gpt":0.24596515815861444,"score_spread":0.21729615483067594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115904774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977563,0.000712712,0.0010879028,0.000024728293,0.000009513553,0.0000143662,0.00006997072,0.000012820051,0.00031165683],"genre_scores_gemma":[0.9973385,0.0005473342,0.0013041026,0.00006499045,0.000012122531,0.00003743887,0.00016682869,0.0000054776183,0.0005232102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998029,0.00006582152,0.000017637856,0.000028042821,0.000031074334,0.000054513137],"domain_scores_gemma":[0.9998179,0.000057264595,0.00003682834,0.000019179462,0.00001887257,0.000049972983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003032971,0.00029759845,0.00025300388,0.00011243087,0.0000776888,0.00026894346,0.000082415936,0.0002667809,0.0008723921],"category_scores_gemma":[0.00021634223,0.00008962882,0.00019790189,0.00007212341,0.00019167367,0.0001905428,0.00019658297,0.0005121383,0.00016283653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001606781,0.00002154909,0.00008045111,0.000018447388,0.0000024686099,0.000028204875,0.000009309624,0.000018652385,0.99928635,0.000023581162,0.0000030528122,0.00034722],"study_design_scores_gemma":[0.000030635172,0.0020452172,0.0083900485,0.000007753465,0.000024243873,0.00015508985,0.000050730545,0.00046993897,0.9882681,0.0000498014,0.00050345086,0.0000051069046],"about_ca_topic_score_codex":0.00012004761,"about_ca_topic_score_gemma":0.0001472007,"teacher_disagreement_score":0.0008723921,"about_ca_system_score_codex":0.00010119244,"about_ca_system_score_gemma":0.000082737766,"threshold_uncertainty_score":0.0029184818},"labels":[],"label_agreement":null},{"id":"W2116227836","doi":"10.1128/jvi.05996-11","title":"CD8 <sup>+</sup> T Cell Immunodominance in Lymphocytic Choriomeningitis Virus Infection Is Modified in the Presence of Toll-Like Receptor Agonists","year":2011,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Immunodominance; Lymphocytic choriomeningitis; Biology; Epitope; Virology; Subdominant; Toll-like receptor; Cytotoxic T cell; Antigen; CD8; TLR2; TLR3; Antigen presentation; T cell; Immunology; Immune system; Innate immune system","score_opus":0.01616934735493562,"score_gpt":0.22964147344384556,"score_spread":0.21347212608890995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116227836","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988601,0.0002997959,0.00031617566,0.000027729748,0.000010407455,0.0000062410704,0.00004209171,0.0000101782025,0.00042722624],"genre_scores_gemma":[0.9985707,0.00014333685,0.00048224322,0.000039971146,0.000009408004,0.000018888364,0.00010048516,0.000009505558,0.0006255367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997937,0.000057635658,0.000021679452,0.000023448409,0.000037841633,0.00006567382],"domain_scores_gemma":[0.999894,0.000022515544,0.000022191347,0.000016017919,0.0000111613945,0.000034046836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018740317,0.0002723345,0.00019776006,0.00013718696,0.00013752711,0.00032141726,0.00012112075,0.00023963362,0.0010434923],"category_scores_gemma":[0.00015494603,0.00012670537,0.00012936349,0.00008558154,0.00025138204,0.00017598605,0.00016151562,0.0006850544,0.0003677217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024160546,0.000017892142,0.00013000169,0.0000092957425,0.0000011917423,0.000025888156,0.000007688449,0.000014565546,0.9991856,0.000016991426,0.000007076652,0.00034229198],"study_design_scores_gemma":[0.00006047187,0.0007725583,0.0126411775,0.000005844465,0.000015995494,0.0004800997,0.00007200846,0.0008653233,0.98396516,0.000091026355,0.0010251781,0.0000051631305],"about_ca_topic_score_codex":0.00015156044,"about_ca_topic_score_gemma":0.00021385308,"teacher_disagreement_score":0.0010434923,"about_ca_system_score_codex":0.00015596436,"about_ca_system_score_gemma":0.00009007727,"threshold_uncertainty_score":0.0034908652},"labels":[],"label_agreement":null},{"id":"W2116666774","doi":"10.1189/jlb.0908559","title":"Signaling through TLR7 enhances the immunosuppressive activity of murine CD4+CD25+ T regulatory cells","year":2009,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"TLR7; IL-2 receptor; Biology; FOXP3; T cell; Imiquimod; Interleukin 21; CD28; Cell biology; Molecular biology; Immune system; Immunology; Toll-like receptor; Innate immune system","score_opus":0.011596372806146915,"score_gpt":0.25933209110473493,"score_spread":0.247735718298588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116666774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99413586,0.0017387121,0.000989623,0.000071438066,0.000040916337,0.00003777112,0.00015584042,0.00008351597,0.0027461979],"genre_scores_gemma":[0.9949302,0.00096623634,0.0014766288,0.00010865588,0.000057763413,0.00003539658,0.00036905456,0.000018480969,0.002037489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997172,0.000059246864,0.00001867394,0.000037511632,0.00006053975,0.00010681658],"domain_scores_gemma":[0.99988246,0.000019391628,0.000025952972,0.000012492027,0.000016183933,0.00004350099],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013945697,0.0006303936,0.00037188586,0.00031532836,0.00011743534,0.00033503186,0.00019189878,0.00024332007,0.0012039939],"category_scores_gemma":[0.00011201448,0.00012801844,0.00030175145,0.00012340293,0.00018576253,0.00015805628,0.00019601549,0.0006903214,0.0006358333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012840546,0.000047571044,0.00014117477,0.000042605297,0.000006130352,0.000053013642,0.000010135843,0.000098446246,0.9976139,0.00003355629,0.000046101897,0.001778856],"study_design_scores_gemma":[0.000052063424,0.0015113301,0.003001185,0.000013351802,0.00005264564,0.00026656053,0.00004218573,0.0008496705,0.9913428,0.00005088134,0.0028109504,0.0000064851497],"about_ca_topic_score_codex":0.00027333284,"about_ca_topic_score_gemma":0.00058913976,"teacher_disagreement_score":0.0012039939,"about_ca_system_score_codex":0.0001902625,"about_ca_system_score_gemma":0.00017756067,"threshold_uncertainty_score":0.0040277243},"labels":[],"label_agreement":null},{"id":"W2116793364","doi":"10.1152/ajpendo.00084.2010","title":"T cells from burn-injured mice demonstrate a loss of sensitivity to glucocorticoids","year":2010,"lang":"en","type":"article","venue":"American Journal of Physiology-Endocrinology and Metabolism","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Glucocorticoid; MAPK/ERK pathway; IL-2 receptor; T cell; Endocrinology; Internal medicine; Immune system; Glucocorticoid receptor; Medicine; p38 mitogen-activated protein kinases; Kinase; Biology; Immunology; Cell biology","score_opus":0.004246736734227056,"score_gpt":0.2228179937967167,"score_spread":0.21857125706248964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2116793364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99375474,0.001859054,0.0015815466,0.00016301544,0.000057246292,0.000049999817,0.0008893159,0.00012663612,0.001518436],"genre_scores_gemma":[0.9878805,0.0016059972,0.0021707932,0.00028175447,0.00006076168,0.00013740588,0.0018202524,0.000088738496,0.0059538297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958676,0.000028192482,0.000055546094,0.000092997536,0.00011526465,0.00012126748],"domain_scores_gemma":[0.99953675,0.000036031768,0.00013556152,0.000052213752,0.00004891029,0.00019062895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016856867,0.0008132314,0.00057781633,0.00092660467,0.00032729618,0.00045066237,0.0002445821,0.00063029875,0.0030976036],"category_scores_gemma":[0.00019779663,0.00038526065,0.00060716906,0.00034534637,0.00045001795,0.00043425118,0.0002621196,0.0021225016,0.0013842593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039127894,0.000055322125,0.00041349843,0.00003247571,0.000006744076,0.00010958295,0.000037844642,0.000032309294,0.9978861,0.00002762488,0.00003143088,0.00097578834],"study_design_scores_gemma":[0.00010541013,0.0025364333,0.035121247,0.000038437385,0.00008436027,0.0028645222,0.00029557673,0.00084346277,0.95561016,0.0001696411,0.0023049766,0.000025802097],"about_ca_topic_score_codex":0.0006186317,"about_ca_topic_score_gemma":0.0006265494,"teacher_disagreement_score":0.0030976036,"about_ca_system_score_codex":0.00032449028,"about_ca_system_score_gemma":0.00018426677,"threshold_uncertainty_score":0.010362506},"labels":[],"label_agreement":null},{"id":"W2117371526","doi":"10.1189/jlb.1012540","title":"Crosstalk between neutrophils and dendritic cells: a context-dependent process","year":2012,"lang":"en","type":"review","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Crosstalk; Biology; Immunology; Immune system; Dendritic cell; Immunity; Cell biology","score_opus":0.05080049650440907,"score_gpt":0.3344199684993975,"score_spread":0.2836194719949884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117371526","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021217437,0.99854314,0.00015287711,0.00027747222,0.00024389,0.000004172424,0.000008016646,0.000005298507,0.000552897],"genre_scores_gemma":[0.0014972612,0.99732035,0.00015423789,0.00015839173,0.0002450203,0.0000071746604,0.000015853098,0.000001042977,0.00060071464],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975485,0.000041711242,0.00003362949,0.000047881593,0.000086040025,0.000035918987],"domain_scores_gemma":[0.99977094,0.00007656894,0.000042093943,0.000006671437,0.00006325266,0.00004042522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061445875,0.0009591861,0.0016243283,0.0009640772,0.00030806332,0.0014403481,0.00093105744,0.0015901823,0.0018668176],"category_scores_gemma":[0.00041743476,0.00031760323,0.00029302342,0.0011392056,0.0005910157,0.0016878631,0.00081849535,0.0013858032,0.0016182539],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016664612,0.000055356606,0.00041688577,0.011467788,0.000072135714,0.00053253194,0.00011303123,0.00029478886,0.011088456,0.0056198756,0.019835982,0.9503365],"study_design_scores_gemma":[0.00002521902,0.0001350944,0.001648185,0.0019839408,0.00008940603,0.0021055662,0.00011339401,0.00009999622,0.0026102033,0.0020397468,0.98912525,0.000023935228],"about_ca_topic_score_codex":0.0005169085,"about_ca_topic_score_gemma":0.000895285,"teacher_disagreement_score":0.0018668176,"about_ca_system_score_codex":0.0008331819,"about_ca_system_score_gemma":0.0011013824,"threshold_uncertainty_score":0.0062451363},"labels":[],"label_agreement":null},{"id":"W2117446946","doi":"10.1378/chest.124.3.1103","title":"Genetic Polymorphisms in Sepsis and Septic Shock","year":2003,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":216,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Sepsis; Septic shock; Candidate gene; Immunology; Gene; Medicine; Genetics; Genetic association; Biology; Genotype; Single-nucleotide polymorphism","score_opus":0.009631235762605444,"score_gpt":0.21840443142835125,"score_spread":0.20877319566574581,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117446946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980118,0.00079032086,0.00018069708,0.00031800824,0.000041593437,0.0000034332295,0.000110748195,0.0000046701534,0.0005386391],"genre_scores_gemma":[0.9991454,0.00021759162,0.00013633701,0.00006985955,0.000060131795,0.0000055475807,0.00006824022,0.000003954406,0.00029289816],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99927574,0.0003689877,0.00009082634,0.00010532031,0.000071717484,0.0000874446],"domain_scores_gemma":[0.9980318,0.0008963134,0.0004326281,0.00008724667,0.000109299166,0.0004426832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006734148,0.00063524995,0.0006376137,0.0009488744,0.00063519157,0.00049682264,0.00035118873,0.001578008,0.002858314],"category_scores_gemma":[0.0027617877,0.0003751558,0.0006354837,0.0011006969,0.00056248496,0.0003520692,0.00042742197,0.0011837622,0.00030830456],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009883235,0.0005687165,0.95679134,0.00007612296,0.0009596418,0.005043585,0.00030734067,0.00056582375,0.019780496,0.00039328955,0.00041022905,0.0052201226],"study_design_scores_gemma":[0.00020865315,0.000730883,0.9918424,0.000038347967,0.0004524625,0.0038636597,0.0002726015,0.0006777533,0.0008356977,0.0006800378,0.0003738022,0.000023782452],"about_ca_topic_score_codex":0.0013651262,"about_ca_topic_score_gemma":0.0009204092,"teacher_disagreement_score":0.002858314,"about_ca_system_score_codex":0.00018076248,"about_ca_system_score_gemma":0.00030863512,"threshold_uncertainty_score":0.0095620155},"labels":[],"label_agreement":null},{"id":"W2117475938","doi":"10.1128/iai.01280-12","title":"Toll-Like Receptor 4/Stem Cell Antigen 1 Signaling Promotes Hematopoietic Precursor Cell Commitment to Granulocyte Development during the Granulopoietic Response to Escherichia coli Bacteremia","year":2013,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health","keywords":"Biology; Bone marrow; Haematopoiesis; Stem cell; Myeloid; Progenitor cell; Downregulation and upregulation; Immunology; Molecular biology; Granulopoiesis; Hematopoietic stem cell; Cancer research; Cell biology","score_opus":0.008879455793590093,"score_gpt":0.21052434535968342,"score_spread":0.20164488956609333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117475938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997027,0.0012106553,0.00082806643,0.000051372535,0.00001296358,0.00002069363,0.00020038302,0.00005264002,0.0005963429],"genre_scores_gemma":[0.99498796,0.0009584595,0.0018223403,0.00006701733,0.000015640066,0.00005513447,0.0004324186,0.000014730054,0.0016462005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975115,0.000061278246,0.000024348827,0.00003413902,0.00003997793,0.00008916128],"domain_scores_gemma":[0.99987936,0.0000144497535,0.000038179325,0.000010299245,0.000010788587,0.00004686563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017287328,0.00042449718,0.0003502375,0.00038559243,0.00012869934,0.0002807803,0.00012426304,0.0002464581,0.00086040125],"category_scores_gemma":[0.00012373486,0.00018525081,0.00024847707,0.00013857361,0.00023831733,0.00018408378,0.0002975942,0.00062696007,0.00036912927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022568228,0.000020714579,0.000247495,0.000025187714,0.0000014407002,0.000054220905,0.000015024759,0.000027695232,0.9986534,0.000040545925,0.000020700933,0.000667874],"study_design_scores_gemma":[0.00004232252,0.0006606669,0.02450331,0.000017316614,0.00002253869,0.0002467906,0.00010538772,0.0009454957,0.97175646,0.00007787414,0.0016148011,0.000006991915],"about_ca_topic_score_codex":0.00022480401,"about_ca_topic_score_gemma":0.00046487927,"teacher_disagreement_score":0.00086040125,"about_ca_system_score_codex":0.00022442365,"about_ca_system_score_gemma":0.0002155857,"threshold_uncertainty_score":0.0028783083},"labels":[],"label_agreement":null},{"id":"W2117589198","doi":"10.1152/ajpgi.00014.2004","title":"Proinflammatory properties of IL-4 in the intestinal microenvironment","year":2004,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Proinflammatory cytokine; Colitis; Cytokine; Immunology; Tumor necrosis factor alpha; Immune system; T helper cell; Biology; T cell; Inflammation; Medicine","score_opus":0.007613622077778177,"score_gpt":0.19068867311587248,"score_spread":0.1830750510380943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117589198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98913795,0.0067545227,0.00269009,0.00014104949,0.000045019566,0.00001984212,0.0001353201,0.000060738428,0.0010153869],"genre_scores_gemma":[0.99537486,0.0018768638,0.0016974835,0.000045399272,0.000038302605,0.000024150311,0.00017200844,0.0000074342547,0.00076355477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986315,0.000034250075,0.000010828115,0.000018383833,0.0000320761,0.000041342213],"domain_scores_gemma":[0.99981135,0.000031285064,0.000054896635,0.000020987782,0.000028974877,0.000052508774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018393692,0.00047763367,0.00020932949,0.0003432825,0.0001708793,0.00046137604,0.00009603087,0.00022232984,0.0006963929],"category_scores_gemma":[0.00013127392,0.00013714368,0.0002494384,0.00012461212,0.00027634384,0.00029208264,0.00020538823,0.00046265934,0.00020749636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012793479,0.000008948982,0.00038101702,0.00003272156,0.0000026945622,0.000076071796,0.000008120307,0.00004207908,0.9986242,0.000028031565,0.0000065186186,0.00066149986],"study_design_scores_gemma":[0.000025746525,0.00068817055,0.011138692,0.000019761941,0.00004758045,0.0005849917,0.000083284234,0.0005984816,0.9851579,0.00013281574,0.0015161323,0.000006450962],"about_ca_topic_score_codex":0.00019066386,"about_ca_topic_score_gemma":0.00023459746,"teacher_disagreement_score":0.0006963929,"about_ca_system_score_codex":0.00023277737,"about_ca_system_score_gemma":0.00020107816,"threshold_uncertainty_score":0.0023296475},"labels":[],"label_agreement":null},{"id":"W2117943649","doi":"10.1128/cvi.00310-09","title":"Receptor Recognition of and Immune Intracellular Pathways for <i>Veillonella parvula</i> Lipopolysaccharide","year":2009,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TLR4; Biology; TLR2; Lipopolysaccharide; Cytokine; Tumor necrosis factor alpha; Microbiology; Immune system; Immunology","score_opus":0.029066066603272853,"score_gpt":0.28096055450357105,"score_spread":0.25189448790029817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2117943649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9781975,0.010541445,0.0066978373,0.0005698398,0.00011185191,0.00009289445,0.00032424522,0.000082286024,0.0033821333],"genre_scores_gemma":[0.9876308,0.0034684704,0.0042906585,0.00020622303,0.000066044726,0.0001164788,0.0006862429,0.0000119039505,0.00352316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998313,0.000055298126,0.000010185535,0.000020585629,0.00002495362,0.00005768572],"domain_scores_gemma":[0.9998926,0.000017855524,0.000039569954,0.000008667267,0.000019475538,0.000021812672],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001242308,0.0004776357,0.00017306393,0.00016577191,0.00014452766,0.0003493996,0.00017098295,0.00033180395,0.0030486481],"category_scores_gemma":[0.0001592104,0.00011569583,0.00033502898,0.00007690988,0.00017444602,0.00030958906,0.0002503032,0.00046972925,0.0010298761],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032883688,0.00003476356,0.0002678723,0.00009556903,0.000004212784,0.00011678215,0.00001570465,0.00004835519,0.99705684,0.00010016016,0.00006765868,0.0018633252],"study_design_scores_gemma":[0.00012967188,0.0017067211,0.021477342,0.0000770836,0.000049120874,0.0025335443,0.00026130094,0.0024551589,0.9629977,0.00047638087,0.007816178,0.000019798385],"about_ca_topic_score_codex":0.00024150596,"about_ca_topic_score_gemma":0.00019028773,"teacher_disagreement_score":0.0030486481,"about_ca_system_score_codex":0.0002493616,"about_ca_system_score_gemma":0.00015546117,"threshold_uncertainty_score":0.010198772},"labels":[],"label_agreement":null},{"id":"W2118048714","doi":"10.1016/j.chembiol.2015.07.017","title":"Inflammatory Signaling by NOD-RIPK2 Is Inhibited by Clinically Relevant Type II Kinase Inhibitors","year":2015,"lang":"en","type":"article","venue":"Chemistry & Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministero dello Sviluppo Economico; Danmarks Frie Forskningsfond; Ontario Ministry of Economic Development and Innovation; Ontario Genomics Institute; National Institute of General Medical Sciences; Diamond Light Source; Wellcome Trust; Ludwig Institute for Cancer Research; Deutsche Forschungsgemeinschaft; GlaxoSmithKline; Ontario Genomics; Crohn's and Colitis Foundation of America; Genome Canada; Leona M. and Harry B. Helmsley Charitable Trust; Pfizer; Eli Lilly and Company","keywords":"Ponatinib; Pharmacology; Inflammasome; Autophosphorylation; Chemistry; Signal transduction; Protein kinase A; Kinase; Cancer research; Inflammation; Cell biology; Biology; Tyrosine kinase; Dasatinib; Immunology","score_opus":0.01301276663784415,"score_gpt":0.25353929677055703,"score_spread":0.24052653013271288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118048714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96982455,0.013081628,0.00563676,0.0004963325,0.00013143013,0.00013134906,0.00087372307,0.00027550108,0.00954877],"genre_scores_gemma":[0.9939492,0.0023983647,0.0017784293,0.0000889096,0.000016712964,0.000052784002,0.0006334618,0.000017220696,0.001064811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998124,0.00004366869,0.000021139991,0.000026173553,0.000045236226,0.00005132329],"domain_scores_gemma":[0.99995553,0.000007595801,0.000014334049,0.000006220738,0.0000050396775,0.000011340248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024246922,0.00033185742,0.0004517912,0.00012932958,0.00013635075,0.00038255058,0.00027433483,0.00018458541,0.00124418],"category_scores_gemma":[0.0002276247,0.00014737598,0.0002545068,0.00019048505,0.00021892149,0.00020929197,0.0001474987,0.0006283281,0.00045469677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010303353,0.00020688167,0.00042011388,0.00025807586,0.00006436832,0.00020409154,0.000022719481,0.0011816954,0.9841225,0.00068452227,0.0009734941,0.010831129],"study_design_scores_gemma":[0.0006807638,0.00169942,0.0035340118,0.00001857963,0.000059596507,0.0019227434,0.000031220698,0.003999566,0.9711665,0.0002832484,0.016583867,0.000020515805],"about_ca_topic_score_codex":0.00028035903,"about_ca_topic_score_gemma":0.0006234263,"teacher_disagreement_score":0.00124418,"about_ca_system_score_codex":0.00041072795,"about_ca_system_score_gemma":0.0003232614,"threshold_uncertainty_score":0.0041621923},"labels":[],"label_agreement":null},{"id":"W2118288869","doi":"10.1093/bja/aeu225","title":"Pulmonary overexpression of inhibitor κBα decreases the severity of ventilator-induced lung injury in a rat model","year":2014,"lang":"en","type":"article","venue":"British Journal of Anaesthesia","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"European Research Council; Health Research Board","keywords":"Lung; Medicine; Pulmonary Injury; Internal medicine; Pulmonary fibrosis","score_opus":0.007422169608773606,"score_gpt":0.22724664288246332,"score_spread":0.21982447327368973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118288869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98907965,0.0047464613,0.0036293946,0.0004974217,0.0002905819,0.000060098813,0.00038467805,0.00023456755,0.0010771534],"genre_scores_gemma":[0.99019814,0.0035485183,0.0015281292,0.00010732927,0.00006479339,0.00009106346,0.00035524205,0.000027813685,0.004078964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996804,0.000037794067,0.000028806167,0.000061628576,0.000078262965,0.000113013804],"domain_scores_gemma":[0.999616,0.000027281052,0.00014031201,0.000042048305,0.000030023586,0.00014431801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003223357,0.00084207684,0.00064992055,0.00055003725,0.00029966803,0.00041439987,0.0004776423,0.00068474864,0.002378849],"category_scores_gemma":[0.00020851953,0.0003613423,0.0006131641,0.00028423977,0.0008126314,0.00052667235,0.00026963747,0.002040541,0.00051264645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024013978,0.00063620025,0.0003814896,0.0001589785,0.000023933748,0.00017882683,0.00003820964,0.00017457007,0.99286795,0.00012984952,0.0001945504,0.002814051],"study_design_scores_gemma":[0.00017837966,0.0058937697,0.006605974,0.00004353214,0.000104970546,0.0005188345,0.00018806396,0.001119531,0.9830341,0.00018100634,0.002108995,0.000022918308],"about_ca_topic_score_codex":0.00083632773,"about_ca_topic_score_gemma":0.0012001747,"teacher_disagreement_score":0.002378849,"about_ca_system_score_codex":0.00033951923,"about_ca_system_score_gemma":0.0005583219,"threshold_uncertainty_score":0.007958055},"labels":[],"label_agreement":null},{"id":"W2118766364","doi":"10.1089/jmf.2007.401","title":"Natural Killer Cell Activation and Modulation of Chemokine Receptor Profile <i>In Vitro</i> by an Extract from the Cyanophyta <i>Aphanizomenon flos-aquae</i>","year":2007,"lang":"en","type":"article","venue":"Journal of Medicinal Food","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Aphanizomenon; In vitro; Chemokine receptor; Biology; Flos; Chemokine; Receptor; Microbiology; Chemistry; Cell biology; Biochemistry; Cyanobacteria; Genetics; Anabaena; Bacteria","score_opus":0.0064158352220791545,"score_gpt":0.22191086282204886,"score_spread":0.21549502759996972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2118766364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988336,0.0006708943,0.00016058846,0.000024536641,0.000024736773,0.00008271937,0.000059618214,0.0000068272516,0.00013647591],"genre_scores_gemma":[0.99731183,0.0008171963,0.000645304,0.00009984441,0.000042016367,0.000170239,0.00019695783,0.0000039351703,0.000712841],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999835,0.000057424004,0.000013980167,0.000035252815,0.000018446784,0.00003985763],"domain_scores_gemma":[0.99986756,0.000033506247,0.0000421981,0.000009205443,0.000011955979,0.00003561779],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002452516,0.00044340038,0.00054109463,0.00013436274,0.0001722129,0.00019230742,0.00013658784,0.00028529862,0.0013177408],"category_scores_gemma":[0.00019695616,0.000163608,0.00035745028,0.00009834649,0.00029537475,0.00016655221,0.00012777233,0.00044192033,0.00010962101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.08462349,0.0054841684,0.0011753237,0.0005025208,0.00011944957,0.00007154003,0.000086268396,0.00012633065,0.8902725,0.000043746975,0.00010993417,0.017384652],"study_design_scores_gemma":[0.018318871,0.58788264,0.049850732,0.000054645334,0.00046584767,0.00031399258,0.0001401689,0.00054380693,0.3397843,0.000111974274,0.0024916409,0.000041358835],"about_ca_topic_score_codex":0.00029549358,"about_ca_topic_score_gemma":0.0005667409,"teacher_disagreement_score":0.0013177408,"about_ca_system_score_codex":0.00012904772,"about_ca_system_score_gemma":0.0001879703,"threshold_uncertainty_score":0.0044083},"labels":[],"label_agreement":null},{"id":"W2119167266","doi":"10.1172/jci32567","title":"TNF-α is critical for antitumor but not antiviral T cell immunity in mice","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":222,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"National Cancer Institute; University of Toronto; Terry Fox Foundation; Campbell Family Institute for Breast Cancer Research","keywords":"Tumor necrosis factor alpha; Immunology; Immune system; Immunity; Inflammation; TLR2; Cytokine; Priming (agriculture); T cell; Acquired immune system; Medicine; Biology; Cancer research; Innate immune system","score_opus":0.06735948535393264,"score_gpt":0.38258413756802007,"score_spread":0.3152246522140874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119167266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96704537,0.00943408,0.008369894,0.0011697838,0.00027888178,0.00022162245,0.0018718978,0.0009551769,0.01065329],"genre_scores_gemma":[0.9770627,0.0034837937,0.006209622,0.00046426803,0.00011870109,0.00021966806,0.0013616788,0.00023095935,0.010848566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991259,0.00024298826,0.000109701934,0.00016543028,0.00017297656,0.00018310187],"domain_scores_gemma":[0.99873656,0.00018074433,0.00044994496,0.00020558805,0.00007104371,0.00035614896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074426824,0.0010485937,0.0006341829,0.0011429399,0.00045650493,0.001249547,0.00065187743,0.0012076027,0.003065439],"category_scores_gemma":[0.0004934864,0.0008870769,0.00060993445,0.00034552862,0.00090673374,0.00082795415,0.00047155426,0.0024918113,0.002017192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009998581,0.00018760054,0.00028419975,0.00007741859,0.000017867771,0.0002316076,0.000040049374,0.0001240392,0.9948258,0.00064035325,0.0001514043,0.0024197362],"study_design_scores_gemma":[0.00054070144,0.002269879,0.0057673356,0.00011885553,0.00008813048,0.0030963111,0.00009795288,0.0021277966,0.9705687,0.001037676,0.014265849,0.000020849444],"about_ca_topic_score_codex":0.00037911232,"about_ca_topic_score_gemma":0.0004262414,"teacher_disagreement_score":0.003065439,"about_ca_system_score_codex":0.0008250476,"about_ca_system_score_gemma":0.00051428116,"threshold_uncertainty_score":0.0102549195},"labels":[],"label_agreement":null},{"id":"W2119229144","doi":"10.4049/jimmunol.1102395","title":"Alcohol Impairs the Myeloid Proliferative Response to Bacteremia in Mice by Inhibiting the Stem Cell Antigen-1/ERK Pathway","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institute on Alcohol Abuse and Alcoholism","keywords":"MAPK/ERK pathway; Myeloid; Haematopoiesis; Bacteremia; Cancer research; Stem cell; Cell growth; Progenitor cell; Downregulation and upregulation; Cell; Immunology; Biology; Cell biology; Signal transduction; Microbiology; Biochemistry","score_opus":0.0110638504565779,"score_gpt":0.2312672718426209,"score_spread":0.22020342138604299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119229144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99737537,0.00070782757,0.00094854296,0.00008939918,0.000014607202,0.000028167264,0.0002127894,0.00010269421,0.0005205275],"genre_scores_gemma":[0.99394834,0.0010379405,0.001682524,0.000077154335,0.0000150037395,0.00007535728,0.00032006283,0.000028545937,0.0028150573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981695,0.000039827883,0.000017547958,0.000032475833,0.000032250588,0.000060912866],"domain_scores_gemma":[0.99975413,0.000019532823,0.00010669692,0.000021419144,0.00001545766,0.000082791186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015959128,0.0006041978,0.0003089772,0.00047034535,0.00013813286,0.00023747286,0.00018779527,0.00029380978,0.0010737706],"category_scores_gemma":[0.00011452826,0.00025695082,0.00023323212,0.00013215421,0.00039068208,0.000288266,0.00022347622,0.00071119476,0.0002523563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073174166,0.0001432477,0.00036706383,0.000027311238,0.0000065969516,0.000036978858,0.000018147335,0.000053346892,0.9970925,0.00005675271,0.000025569672,0.0014407296],"study_design_scores_gemma":[0.000086168526,0.0030826945,0.01683042,0.000018471037,0.000052668292,0.00019768652,0.00006552674,0.0015007413,0.97659916,0.00013068263,0.0014227846,0.000012990212],"about_ca_topic_score_codex":0.00063942175,"about_ca_topic_score_gemma":0.0014618448,"teacher_disagreement_score":0.0010737706,"about_ca_system_score_codex":0.0003204366,"about_ca_system_score_gemma":0.00025472092,"threshold_uncertainty_score":0.0035921335},"labels":[],"label_agreement":null},{"id":"W2119605300","doi":"10.4049/jimmunol.178.11.7344","title":"The MYD88-Independent Pathway Is Not Mobilized in Human Neutrophils Stimulated via TLR4","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Associazione Italiana per la Ricerca sul Cancro","keywords":"TLR4; Cell biology; CXCL10; Transcription factor; Signal transduction; Biology; Myeloid; Innate immune system; Chemokine; Cancer research; Immunology; Immune system; Gene; Biochemistry","score_opus":0.010724175338799815,"score_gpt":0.2543121632065368,"score_spread":0.243587987867737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119605300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961998,0.00117876,0.0014147796,0.0000811508,0.0000116379315,0.000047820384,0.00027972326,0.000024345218,0.0007619233],"genre_scores_gemma":[0.99632436,0.0004904131,0.0008733117,0.0000667536,0.000009717525,0.00008801331,0.00093707326,0.000007229348,0.0012030193],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962926,0.00009245657,0.000046000452,0.00006205358,0.00008739198,0.00008285344],"domain_scores_gemma":[0.9998074,0.000029696865,0.000058343936,0.000045493976,0.000021150452,0.000037866408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003380979,0.00016503145,0.00029677225,0.00020321566,0.00013346442,0.00038176894,0.00021054593,0.0002991337,0.0020704386],"category_scores_gemma":[0.00043282,0.00019203531,0.00023149012,0.00012803284,0.00017306031,0.0002199578,0.0003273308,0.0003740728,0.0008592927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011926709,0.000047395515,0.0033811247,0.000073899726,0.000012877927,0.00035283808,0.000060870683,0.000039153714,0.9916747,0.00012526571,0.000059009428,0.0029801566],"study_design_scores_gemma":[0.00027509572,0.0016830324,0.1295507,0.00006834065,0.00008287495,0.005073538,0.00032995368,0.0021181346,0.85258085,0.00032362272,0.007895669,0.00001809704],"about_ca_topic_score_codex":0.0002774963,"about_ca_topic_score_gemma":0.00021326912,"teacher_disagreement_score":0.0020704386,"about_ca_system_score_codex":0.00023612501,"about_ca_system_score_gemma":0.00024272343,"threshold_uncertainty_score":0.0069262385},"labels":[],"label_agreement":null},{"id":"W2119752695","doi":"10.7150/ijms.5.1","title":"Differential Constitutive and Cytokine-Modulated Expression of Human Toll-like Receptors in Primary Neutrophils, Monocytes, and Macrophages","year":2008,"lang":"en","type":"article","venue":"International Journal of Medical Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":162,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institutes of Health; National Heart, Lung, and Blood Institute; University of Washington","keywords":"TLR2; Innate immune system; TLR9; Biology; TLR4; Monocyte; TLR5; Proinflammatory cytokine; Immunology; Toll-like receptor; Cytokine; Granulocyte; Receptor; Immune system; Cell biology; Inflammation; Gene expression; Gene","score_opus":0.020009333378884095,"score_gpt":0.2878880122703132,"score_spread":0.2678786788914291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119752695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993658,0.0027559286,0.0020134433,0.000060366758,0.000021165197,0.000055244338,0.00045978444,0.000016620263,0.00095941516],"genre_scores_gemma":[0.99374676,0.0013494077,0.0026500602,0.00009794405,0.000014062208,0.0001207849,0.00073665526,0.000005723532,0.0012784837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996853,0.00007861223,0.000035425535,0.00005484811,0.00006185711,0.00008405589],"domain_scores_gemma":[0.9998919,0.00003234529,0.000016099602,0.000014775348,0.00002705758,0.000017827011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002836415,0.00016858587,0.000169639,0.00011874516,0.0001136631,0.00030048168,0.000101871825,0.00015172166,0.00052873435],"category_scores_gemma":[0.00023028375,0.00012539848,0.00017439444,0.00010898356,0.00016309292,0.00013063084,0.00015783744,0.00022713344,0.00024084923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035484074,0.000016550335,0.0007763314,0.000051908537,0.0000040755694,0.000078347264,0.000040377745,0.00003163186,0.9973253,0.000054486023,0.000030347997,0.0012356885],"study_design_scores_gemma":[0.00007932991,0.00065783464,0.031888433,0.000024589253,0.000044306395,0.0007159509,0.00014766955,0.00072507426,0.9622082,0.00011179226,0.0033851883,0.000011587757],"about_ca_topic_score_codex":0.00048543056,"about_ca_topic_score_gemma":0.00069772755,"teacher_disagreement_score":0.00052873435,"about_ca_system_score_codex":0.0002650695,"about_ca_system_score_gemma":0.00019154102,"threshold_uncertainty_score":0.0019232631},"labels":[],"label_agreement":null},{"id":"W2119847432","doi":"10.4049/jimmunol.169.10.5679","title":"Granulocyte-Macrophage Colony-Stimulating Factor (GM-CSF) and Inflammatory Stimuli Up-Regulate Secretion of the Soluble GM-CSF Receptor in Human Monocytes: Evidence for Ectodomain Shedding of the Cell Surface GM-CSF Receptor α Subunit","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Alberta Cancer Foundation","funders":"Canadian Institutes of Health Research; Arthritis Society","keywords":"Ectodomain; Secretion; Biology; Alternative splicing; Cell culture; Cell biology; Receptor; Molecular biology; Granulocyte macrophage colony-stimulating factor; Cytokine; Gene isoform; Gene; Immunology; Endocrinology; Biochemistry","score_opus":0.035345408629544495,"score_gpt":0.27074163387758593,"score_spread":0.23539622524804144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2119847432","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963456,0.0018847391,0.00063477835,0.00008227633,0.000023336517,0.000027568847,0.0002539169,0.00002101618,0.00072694704],"genre_scores_gemma":[0.9962637,0.0010212908,0.0013703603,0.00009775457,0.000016902732,0.00003683016,0.00046968306,0.000006570493,0.0007169664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999843,0.000033759647,0.000020183967,0.000015637695,0.000035186058,0.000052223277],"domain_scores_gemma":[0.9999044,0.000022343243,0.000017131648,0.000011560479,0.000013795908,0.000030707928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001241176,0.00029877343,0.00024927434,0.00020464638,0.00012378595,0.00026711228,0.00007252819,0.00025921583,0.00072031334],"category_scores_gemma":[0.00013401355,0.00015716089,0.00033048276,0.00019162215,0.00015428627,0.00010269179,0.00017107837,0.0004058689,0.00049905624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028408522,0.000029277524,0.0004265631,0.00002274038,0.000004040015,0.00012992584,0.000019990342,0.000012216275,0.9984237,0.000015213392,0.000020721727,0.000611542],"study_design_scores_gemma":[0.00008077667,0.0011383169,0.044326905,0.000011276058,0.00004641716,0.0014527866,0.000091024194,0.0006343563,0.9499511,0.00006444636,0.0021955334,0.000007118316],"about_ca_topic_score_codex":0.00079519965,"about_ca_topic_score_gemma":0.0010525445,"teacher_disagreement_score":0.00079519965,"about_ca_system_score_codex":0.00015797325,"about_ca_system_score_gemma":0.00018956949,"threshold_uncertainty_score":0.0024096966},"labels":[],"label_agreement":null},{"id":"W2120037979","doi":"10.1182/blood-2010-12-325951","title":"β2-Glycoprotein I: a novel component of innate immunity","year":2011,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":126,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Lunds Universitet; Medical Research Council; ZonMw","keywords":"Innate immune system; Sepsis; Lipopolysaccharide; Immunology; Biology; Immunity; Microbiology; Immune system; Monocyte; Inflammation; Tumor necrosis factor alpha; Gram-negative bacteria; Acquired immune system; Tissue factor; Bacterial outer membrane; Neutralization; Antibody; Medicine; Escherichia coli; Internal medicine; Biochemistry","score_opus":0.024442880841813976,"score_gpt":0.21247249555939096,"score_spread":0.18802961471757698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120037979","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79680437,0.16855209,0.015950298,0.003788093,0.0013082463,0.00017832365,0.000779245,0.00040337833,0.012235913],"genre_scores_gemma":[0.94179887,0.037604954,0.0070789335,0.0010564427,0.001007109,0.0000570608,0.0015385223,0.000019897541,0.009838207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999473,0.0000072547086,0.0000023985997,0.0000122686015,0.000014591936,0.00001625386],"domain_scores_gemma":[0.9999703,0.000002533274,0.000006998471,0.0000017146549,0.0000067715487,0.00001155737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000823289,0.000500395,0.00023906061,0.00019162799,0.00016818239,0.00047985718,0.0002155861,0.0004228542,0.0006440096],"category_scores_gemma":[0.00008510018,0.00007421086,0.00018689907,0.00018737138,0.00023369957,0.0003571565,0.00016797661,0.0005336031,0.0005189939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031404698,0.00008197337,0.0011198657,0.00029636355,0.000021872189,0.0012651798,0.00006427025,0.00012740311,0.96498936,0.0019000797,0.0014599924,0.028359635],"study_design_scores_gemma":[0.00017660564,0.0036574886,0.043679874,0.00014640464,0.00018490026,0.02145253,0.00025700056,0.0038913274,0.70581216,0.005375873,0.21528655,0.00007923347],"about_ca_topic_score_codex":0.00023836367,"about_ca_topic_score_gemma":0.00018897468,"teacher_disagreement_score":0.0006440096,"about_ca_system_score_codex":0.00029177841,"about_ca_system_score_gemma":0.0002248237,"threshold_uncertainty_score":0.00215441},"labels":[],"label_agreement":null},{"id":"W2120088368","doi":"10.1086/314070","title":"Bacille Calmette-Guérin Vaccine","year":2000,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Thornhill Medical (Canada); Princess Margaret Cancer Centre; University of Toronto","funders":"","keywords":"Garcia; Art history; Environmental ethics; Humanities; Philosophy; Art","score_opus":0.014834747802701186,"score_gpt":0.3042291706333402,"score_spread":0.28939442283063904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120088368","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14328673,0.33060408,0.013900855,0.14233834,0.06348193,0.0020636972,0.004388986,0.00089159585,0.29904372],"genre_scores_gemma":[0.31239578,0.12020931,0.011738634,0.026255418,0.00396225,0.001025109,0.005842296,0.0001671454,0.51840407],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989586,0.00034044537,0.00004692788,0.00010185115,0.00033481905,0.00021730833],"domain_scores_gemma":[0.99972016,0.00005025057,0.000023355899,0.000014625481,0.00010112372,0.000090365844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014950252,0.00056478963,0.00055813405,0.00059188996,0.00060288137,0.0009249503,0.00037400858,0.0014545345,0.017195484],"category_scores_gemma":[0.0016185911,0.00019028138,0.00022879576,0.00028432894,0.00038225963,0.0003785531,0.00070331496,0.0015103006,0.0057193167],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033156811,0.0003861018,0.002596205,0.001709909,0.000068293695,0.0007428579,0.0003460823,0.00027296113,0.12649679,0.008040128,0.4330923,0.42293262],"study_design_scores_gemma":[0.00012003662,0.00093112787,0.0031904578,0.00028890406,0.000014329934,0.00036618812,0.00015340888,0.00008948841,0.02088286,0.0005974018,0.9733536,0.000012151732],"about_ca_topic_score_codex":0.005111454,"about_ca_topic_score_gemma":0.0077823433,"teacher_disagreement_score":0.017195484,"about_ca_system_score_codex":0.0016442679,"about_ca_system_score_gemma":0.0011898521,"threshold_uncertainty_score":0.05752468},"labels":[],"label_agreement":null},{"id":"W2120211786","doi":"10.1124/pr.109.001073","title":"Therapeutic Targeting of Toll-Like Receptors for Infectious and Inflammatory Diseases and Cancer","year":2009,"lang":"en","type":"review","venue":"Pharmacological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":422,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Science Foundation Ireland; Horserace Betting Levy Board; Research Councils UK; Wellcome Trust","keywords":"Immunology; TRIF; TLR2; Immune system; Toll-like receptor; Inflammation; TLR7; TLR4; Innate immune system; Tumor necrosis factor alpha; Transcription factor; Medicine; Receptor; Interferon regulatory factors; Cancer; Biology; Cancer research; Gene; Genetics","score_opus":0.054979104757268644,"score_gpt":0.3763082175126839,"score_spread":0.32132911275541526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120211786","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029830143,0.99648595,0.00067114166,0.00023881574,0.000419907,0.000015796179,0.000027807966,0.0000256649,0.0018166237],"genre_scores_gemma":[0.0017011078,0.99487984,0.0008217932,0.00025975954,0.0002873064,0.000020410303,0.00006804816,0.0000039493784,0.001957685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998996,0.0000129196405,0.000012087199,0.000017762137,0.000042000273,0.000015666928],"domain_scores_gemma":[0.9998816,0.000043864013,0.000020560039,0.000004857394,0.0000333184,0.000015818052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040761507,0.0011668535,0.001425875,0.0015832771,0.00022613535,0.00064634654,0.00088934845,0.00092011376,0.0039452007],"category_scores_gemma":[0.00039394232,0.00025683522,0.00042853574,0.0012424428,0.00039319252,0.0009400267,0.0004486529,0.0017640877,0.0025628423],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019986689,0.0001855487,0.00007197596,0.0075922436,0.00008019887,0.00022613915,0.000027300397,0.0004545157,0.012781525,0.0023423398,0.03761681,0.9384215],"study_design_scores_gemma":[0.000111011286,0.00026199737,0.00064302137,0.0012455527,0.00015404618,0.0017444029,0.00002811949,0.00022220613,0.002793653,0.0014157395,0.99135464,0.00002563194],"about_ca_topic_score_codex":0.00055835303,"about_ca_topic_score_gemma":0.0013671578,"teacher_disagreement_score":0.0039452007,"about_ca_system_score_codex":0.00039783536,"about_ca_system_score_gemma":0.000481593,"threshold_uncertainty_score":0.013198018},"labels":[],"label_agreement":null},{"id":"W2120290311","doi":"10.4049/jimmunol.178.2.993","title":"Oxidized Phospholipids Inhibit Phagocytosis and Impair Outcome in Gram-Negative Sepsis In Vivo","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Phagocytosis; CD14; Sepsis; Phosphorylcholine; Inflammation; In vivo; Microbiology; Lipopolysaccharide; Macrophage; Biology; Chemistry; Immunology; Cell biology; Immune system; In vitro; Biochemistry","score_opus":0.012060895421087778,"score_gpt":0.2649590267563441,"score_spread":0.2528981313352563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120290311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99733007,0.0010178834,0.0010168661,0.00007002619,0.000017402162,0.000022746211,0.00006789579,0.000037238504,0.00041998186],"genre_scores_gemma":[0.9971835,0.00066475564,0.0010367943,0.000055485198,0.000009568308,0.000028601784,0.0001872224,0.000012516113,0.000821523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997471,0.00009135516,0.000026128151,0.000021570337,0.000047420024,0.000066385575],"domain_scores_gemma":[0.9996246,0.00005792515,0.000117242125,0.00004675629,0.000038102244,0.00011524286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031339706,0.00057488645,0.0004817191,0.00023043463,0.00012841947,0.00025726433,0.00020168934,0.00040621377,0.0006533188],"category_scores_gemma":[0.00045125405,0.00020557514,0.00017993996,0.00010421294,0.0002826877,0.00021715894,0.0003225124,0.0005284356,0.00025128332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018932081,0.00025096344,0.0006431026,0.00005571683,0.000013170527,0.00012993476,0.000031293228,0.00010274237,0.99346477,0.00010073632,0.000046795925,0.0032675364],"study_design_scores_gemma":[0.00014748887,0.0068046628,0.013334056,0.000019639769,0.00003787228,0.0006821449,0.000051536612,0.0014836127,0.9759621,0.00017260225,0.0012937333,0.000010418364],"about_ca_topic_score_codex":0.00019470394,"about_ca_topic_score_gemma":0.00019000036,"teacher_disagreement_score":0.0006533188,"about_ca_system_score_codex":0.00015682138,"about_ca_system_score_gemma":0.0002526199,"threshold_uncertainty_score":0.002185583},"labels":[],"label_agreement":null},{"id":"W2120699390","doi":"10.1096/fj.06-7227rev","title":"Resolution of in flammation: state of the art, definitions and terms","year":2007,"lang":"en","type":"review","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1034,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Norges Idrettshøgskole; Versus Arthritis","keywords":"Inflammation; Endogeny; Resolution (logic); Neuroscience; Inflammatory response; Field (mathematics); Medicine; Immunology; Computer science; Biology; Artificial intelligence; Internal medicine; Mathematics","score_opus":0.052263102953716535,"score_gpt":0.2882030987810819,"score_spread":0.23593999582736538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2120699390","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003175922,0.99827445,0.00016341207,0.00064131833,0.0004297621,0.00000192876,0.0000044021062,0.0000045921884,0.0004483473],"genre_scores_gemma":[0.0007874864,0.9966708,0.0004615098,0.00069320685,0.00079704716,0.00001120892,0.000017805969,0.0000044181015,0.00055650924],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986312,0.0003607616,0.00024766164,0.00021067697,0.00044434358,0.00010529273],"domain_scores_gemma":[0.9982888,0.0009293606,0.00021028623,0.000064591826,0.00037898205,0.00012796941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032485565,0.001964856,0.003287503,0.005632609,0.0007876153,0.0038332338,0.0026721545,0.0028149101,0.0022664226],"category_scores_gemma":[0.00325588,0.00061378186,0.00062602916,0.0050872504,0.0041385703,0.0061714393,0.0017713727,0.005466853,0.0026996136],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015622705,0.00009548965,0.00025225032,0.013531973,0.000054370965,0.0005665974,0.00035041038,0.0005453148,0.0016284884,0.03289235,0.08113051,0.86879605],"study_design_scores_gemma":[0.000012420507,0.00005710372,0.00029865585,0.0042130607,0.000026243057,0.0019852875,0.00019044505,0.00011998923,0.0004350945,0.011915474,0.9807163,0.000029923502],"about_ca_topic_score_codex":0.0017861266,"about_ca_topic_score_gemma":0.0017236966,"teacher_disagreement_score":0.005632609,"about_ca_system_score_codex":0.0026509508,"about_ca_system_score_gemma":0.0020943547,"threshold_uncertainty_score":0.019234061},"labels":[],"label_agreement":null},{"id":"W2121261816","doi":"10.1136/mp.56.4.232","title":"Isolation and partial characterisation of a new antiproliferative substance from human leucocytes inhibiting growth of <i>Candida albicans</i>","year":2003,"lang":"en","type":"article","venue":"Molecular Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IONICS Mass Spectrometry (Canada)","funders":"","keywords":"Candida albicans; Cytotoxicity; Corpus albicans; Cytotoxic T cell; Biochemistry; Lysis; Chemistry; Molecular mass; Biology; Microbiology; Molecular biology; In vitro; Enzyme","score_opus":0.009219399662876118,"score_gpt":0.22324917468002392,"score_spread":0.21402977501714782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121261816","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98155874,0.00952867,0.006257743,0.00017276773,0.000048161663,0.00015415467,0.0006898011,0.000036713507,0.0015531474],"genre_scores_gemma":[0.98288524,0.003295573,0.00837756,0.00024249319,0.00006983271,0.0000792853,0.0024215996,0.000020502703,0.0026079603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999498,0.000009927542,0.000006268978,0.000009989121,0.000011305003,0.000012675077],"domain_scores_gemma":[0.99992514,0.000020190284,0.000013551109,0.0000059852227,0.000016830389,0.00001824148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010135653,0.00049232476,0.00020304561,0.00025391395,0.00010912404,0.0002443996,0.00014839931,0.00028085156,0.001099441],"category_scores_gemma":[0.00017467486,0.000059499584,0.00030913958,0.00014073109,0.00015387592,0.0001112572,0.00013721902,0.00024890815,0.0004343828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015376562,0.000034536788,0.00044151917,0.00009059721,0.000008218444,0.00027446108,0.000019367859,0.000036500667,0.99439937,0.000030527157,0.00004009399,0.004471096],"study_design_scores_gemma":[0.000068999965,0.0016271381,0.0161205,0.000044533546,0.000066371875,0.0028593107,0.000050399725,0.00035504307,0.97079504,0.00007103991,0.00793292,0.000008727534],"about_ca_topic_score_codex":0.00029302706,"about_ca_topic_score_gemma":0.00025392967,"teacher_disagreement_score":0.001099441,"about_ca_system_score_codex":0.00010056678,"about_ca_system_score_gemma":0.00017306872,"threshold_uncertainty_score":0.0036779642},"labels":[],"label_agreement":null},{"id":"W2121327910","doi":"10.1074/jbc.m403763200","title":"Nucleic Acid Is a Novel Ligand for Innate, Immune Pattern Recognition Collectins Surfactant Proteins A and D and Mannose-binding Lectin","year":2004,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Medical Research Council; Canadian Institutes of Health Research; University of California, San Francisco; Wellcome Trust","keywords":"Collectin; Mannan-binding lectin; Lectin; Nucleic acid; Innate immune system; Mannose; Ficolin; Surfactant protein D; Mannose receptor; Ligand (biochemistry); C-type lectin; Chemistry; Biology; Biochemistry; Receptor","score_opus":0.02580781301940269,"score_gpt":0.23948800733016495,"score_spread":0.21368019431076227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121327910","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94388795,0.024209214,0.017718222,0.0006680072,0.0002660412,0.00008121525,0.0003927289,0.00029456898,0.012482065],"genre_scores_gemma":[0.9704321,0.0040227026,0.01353673,0.00044297418,0.0001198288,0.000063317384,0.00071628625,0.000019769934,0.010646356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986804,0.000027266287,0.000008002089,0.0000390785,0.000038395123,0.000019208503],"domain_scores_gemma":[0.99991906,0.000013472578,0.0000159874,0.000004830422,0.00001314581,0.000033539243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000073841176,0.00034029258,0.0002691315,0.00019603923,0.00031905604,0.00030461795,0.00021861526,0.00041632503,0.0014539341],"category_scores_gemma":[0.00013486668,0.00010504583,0.00017320804,0.000116704134,0.00017294995,0.00020618152,0.00025674634,0.00029960347,0.0005206125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052963387,0.000008848251,0.00017692133,0.00003338174,0.0000033429035,0.00018171985,0.000005639039,0.000035909896,0.997329,0.0002650241,0.00006691899,0.0018404288],"study_design_scores_gemma":[0.00002896986,0.00043706343,0.0037417687,0.000017426872,0.000029608787,0.0044536935,0.00003919128,0.001629254,0.96326524,0.00033419314,0.02600527,0.000018332446],"about_ca_topic_score_codex":0.0005310919,"about_ca_topic_score_gemma":0.00076667074,"teacher_disagreement_score":0.0014539341,"about_ca_system_score_codex":0.0003936116,"about_ca_system_score_gemma":0.000249996,"threshold_uncertainty_score":0.004863918},"labels":[],"label_agreement":null},{"id":"W2121581410","doi":"10.3945/jn.112.167866","title":"β-1,4-Mannobiose Stimulates Innate Immune Responses and Induces TLR4-Dependent Activation of Mouse Macrophages but Reduces Severity of Inflammation during Endotoxemia in Mice","year":2013,"lang":"en","type":"article","venue":"Journal of Nutrition","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"TLR4; TLR2; Lipoteichoic acid; Immune system; Tumor necrosis factor alpha; Lipopolysaccharide; Endocrinology; Cytokine; Inflammation; Biology; Internal medicine; Immunology; Chemistry; Medicine","score_opus":0.00879823218305738,"score_gpt":0.2337736542672881,"score_spread":0.22497542208423071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121581410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970095,0.0006867516,0.0011324049,0.00018700237,0.00004557638,0.00003110174,0.00029277586,0.00007407548,0.0005408289],"genre_scores_gemma":[0.994441,0.0006165088,0.0016135488,0.00014214782,0.00003763462,0.00010362641,0.0006793103,0.00004085932,0.002325512],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955386,0.0000949641,0.000041194646,0.00006696564,0.00006983428,0.00017315679],"domain_scores_gemma":[0.9995834,0.000029948827,0.00011939884,0.00005032407,0.000024335433,0.0001926271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003114476,0.001146941,0.00053947855,0.0007411191,0.00023553656,0.00044230616,0.00039309732,0.0006868513,0.0011366578],"category_scores_gemma":[0.00022441422,0.0004612298,0.0005397224,0.00030744512,0.0005863489,0.00044312637,0.00030719728,0.0019759266,0.00032093344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019965027,0.00021548188,0.0002121108,0.000026609667,0.000009649733,0.000051833063,0.000017239134,0.000055133194,0.99675035,0.00007862491,0.00003217651,0.0005544354],"study_design_scores_gemma":[0.00015945609,0.0020575933,0.007708448,0.000015422276,0.000044210115,0.00017766334,0.00006419958,0.0006755158,0.98814523,0.00012848753,0.0008113664,0.000012375011],"about_ca_topic_score_codex":0.00053135667,"about_ca_topic_score_gemma":0.0009788139,"teacher_disagreement_score":0.001146941,"about_ca_system_score_codex":0.00037762208,"about_ca_system_score_gemma":0.00036929027,"threshold_uncertainty_score":0.003802538},"labels":[],"label_agreement":null},{"id":"W2121753159","doi":"10.4049/jimmunol.169.2.809","title":"Tumor-Infiltrating CD4+ T Lymphocytes Express APO2 Ligand (APO2L)/TRAIL upon Specific Stimulation with Autologous Lung Carcinoma Cells: Role of IFN-α on APO2L/TRAIL Expression and -Mediated Cytotoxicity","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"Institut Gustave-Roussy","keywords":"Cancer research; Stimulation; Cytotoxic T cell; Lewis lung carcinoma; Cytotoxicity; Lung; Ligand (biochemistry); Cell biology; Immunology; Chemistry; Biology; Medicine; Receptor; Neuroscience; Internal medicine; In vitro; Cancer; Metastasis","score_opus":0.00927601100976816,"score_gpt":0.19895322041621802,"score_spread":0.18967720940644986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121753159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99882096,0.00034348533,0.00036094544,0.000013810667,0.000004533383,0.000012796468,0.000039857438,0.000010460222,0.00039317049],"genre_scores_gemma":[0.99825186,0.00021070601,0.00043950812,0.000020152307,0.000008625946,0.000018730354,0.00012070232,0.0000036368942,0.0009260426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998702,0.000024800735,0.000016001199,0.000022913055,0.000023980178,0.000042104988],"domain_scores_gemma":[0.9999337,0.0000136489925,0.000014231105,0.000013125632,0.000010197658,0.000015094522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010950837,0.00020948645,0.00019543584,0.00010119437,0.00008801248,0.00031394997,0.000085358624,0.00018346016,0.0008470878],"category_scores_gemma":[0.000100167585,0.00008562186,0.00015552151,0.000110851506,0.00010984682,0.00017173686,0.00012830735,0.0004000806,0.00038149752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002771794,0.000040133673,0.0013608417,0.000027670625,0.0000037002305,0.000115104645,0.00004589012,0.00004427703,0.99662495,0.000019296771,0.000011405091,0.0014296441],"study_design_scores_gemma":[0.000063321546,0.0010569799,0.015095331,0.000009955053,0.000045535355,0.00089936034,0.00014957917,0.0012122634,0.9801021,0.00007049136,0.0012889937,0.0000059926115],"about_ca_topic_score_codex":0.00020787575,"about_ca_topic_score_gemma":0.00033138256,"teacher_disagreement_score":0.0008470878,"about_ca_system_score_codex":0.00012240221,"about_ca_system_score_gemma":0.00011510545,"threshold_uncertainty_score":0.0028338432},"labels":[],"label_agreement":null},{"id":"W2121839684","doi":"10.1523/jneurosci.1077-04.2004","title":"Long-Term Alterations in Neuroimmune Responses after Neonatal Exposure to Lipopolysaccharide","year":2004,"lang":"en","type":"article","venue":"Journal of Neuroscience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":141,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale","keywords":"Lipopolysaccharide; Neurochemical; Immune system; Cyclooxygenase; Internal medicine; Medicine; Endocrinology; Immunology; Prostaglandin E2; Innate immune system; Biology; Enzyme","score_opus":0.015449832861670364,"score_gpt":0.2683456043987624,"score_spread":0.2528957715370921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121839684","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985576,0.00071887736,0.0002611894,0.000024740319,0.000018096778,0.000006258483,0.00011562146,0.000009215636,0.00028837618],"genre_scores_gemma":[0.9969272,0.000888742,0.00039805364,0.00005611224,0.000011820553,0.00005032253,0.0003320033,0.0000062082304,0.0013296264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988365,0.00001425359,0.00000942156,0.00002775914,0.000028345865,0.000036491976],"domain_scores_gemma":[0.9997211,0.0000339618,0.00009286459,0.00003165292,0.000035977013,0.00008437003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016467164,0.00030635725,0.00033059996,0.00014720489,0.00010583077,0.0002107731,0.00017947816,0.00017466636,0.00073231733],"category_scores_gemma":[0.00025212448,0.00009697058,0.00013359824,0.00009388913,0.00037623526,0.00021960156,0.00024549046,0.0007014303,0.00016059053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002179825,0.00017167108,0.003729911,0.000092636896,0.000016990673,0.00042623963,0.00015402678,0.00005555196,0.9872543,0.00009182111,0.00006429333,0.005762684],"study_design_scores_gemma":[0.00004493064,0.006216135,0.21333979,0.00005266441,0.00009011672,0.0010849081,0.00070941326,0.0004082362,0.7760055,0.0002289135,0.0017966231,0.000022747534],"about_ca_topic_score_codex":0.00035442284,"about_ca_topic_score_gemma":0.0007618727,"teacher_disagreement_score":0.00073231733,"about_ca_system_score_codex":0.0002535182,"about_ca_system_score_gemma":0.00019682417,"threshold_uncertainty_score":0.0024498105},"labels":[],"label_agreement":null},{"id":"W2121856197","doi":"10.1128/iai.68.4.1988-1996.2000","title":"Purified Lipopolysaccharide from<i>Francisella tularensis</i>Live Vaccine Strain (LVS) Induces Protective Immunity against LVS Infection That Requires B Cells and Gamma Interferon","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Francisella tularensis; Biology; Lipopolysaccharide; Microbiology; Tularemia; Immunity; Antibody; Listeria monocytogenes; Virology; Attenuated vaccine; Francisella; Polyclonal antibodies; Interferon gamma; Immune system; Immunology; Bacteria; Virulence; Gene","score_opus":0.014604060396513177,"score_gpt":0.23010757841465662,"score_spread":0.21550351801814344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121856197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971046,0.0006532479,0.001423437,0.00006342916,0.000019402332,0.000025278423,0.00012595845,0.00007453332,0.0005101142],"genre_scores_gemma":[0.99743503,0.00034310162,0.00103713,0.000088493485,0.000017952774,0.000024881449,0.00062698306,0.000012199674,0.0004142047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985695,0.000020587766,0.00001525291,0.00002333961,0.000024257299,0.0000595762],"domain_scores_gemma":[0.9998344,0.000032799795,0.00006438967,0.000016844613,0.00001619143,0.000035311616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016744649,0.00050240685,0.00024986448,0.00016982948,0.000084718326,0.00017026401,0.00013037983,0.00031467038,0.00053674687],"category_scores_gemma":[0.00012918549,0.00012755067,0.00029456764,0.00006609965,0.000202351,0.00017405489,0.00017868995,0.00048470654,0.00023434106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006229739,0.000026429765,0.00021044907,0.000017183569,0.0000029628359,0.000017506118,0.0000044193976,0.000016121468,0.99921525,0.000010476712,0.0000124668095,0.00040440107],"study_design_scores_gemma":[0.000025055004,0.0013155468,0.005965851,0.000010320542,0.000020428304,0.00026548124,0.000022068765,0.0003059085,0.99152994,0.000024070425,0.00051136554,0.0000038939725],"about_ca_topic_score_codex":0.00029228596,"about_ca_topic_score_gemma":0.0004890255,"teacher_disagreement_score":0.00053674687,"about_ca_system_score_codex":0.00022892798,"about_ca_system_score_gemma":0.00017816374,"threshold_uncertainty_score":0.0017955899},"labels":[],"label_agreement":null},{"id":"W2121874550","doi":"10.4049/jimmunol.0802971","title":"Differential Role for c-Rel and C/EBPβ/δ in TLR-Mediated Induction of Proinflammatory Cytokines","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research; National Institutes of Health; University of Pennsylvania","keywords":"Proinflammatory cytokine; Transcription factor; Biology; Cell biology; Cytokine; Signal transduction; Kinase; Stimulation; Immunology; Chemistry; Inflammation; Endocrinology; Biochemistry; Gene","score_opus":0.006890921451452357,"score_gpt":0.21978165521360124,"score_spread":0.21289073376214887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121874550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926473,0.0037572847,0.0021689718,0.00009164669,0.000022913442,0.000020872756,0.00015085335,0.000021452108,0.0011187331],"genre_scores_gemma":[0.99415565,0.001430885,0.0026162863,0.000070206064,0.000015280992,0.00004220344,0.00024131716,0.000009920892,0.0014182484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99958915,0.000055961915,0.000039226903,0.00007075544,0.00009703235,0.00014788783],"domain_scores_gemma":[0.9997061,0.00004177302,0.000056606114,0.000033900906,0.000041885913,0.00011974342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004973052,0.00043111175,0.00025715964,0.0004723591,0.0002296571,0.000379309,0.00026778647,0.0004868567,0.0011045218],"category_scores_gemma":[0.00031605278,0.00023323347,0.0002921818,0.00014185229,0.0004415041,0.00039790437,0.00030967494,0.0005632991,0.0005280058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023940614,0.000014645751,0.00025912107,0.000027634518,0.0000021444619,0.00006247301,0.000009439295,0.000012991575,0.9985933,0.00006645368,0.0000064556552,0.0007059852],"study_design_scores_gemma":[0.0000834537,0.0004910636,0.025539475,0.000030352341,0.00002727058,0.002869404,0.00013222231,0.0005269856,0.968406,0.00028123995,0.0016014075,0.000011165768],"about_ca_topic_score_codex":0.00024781885,"about_ca_topic_score_gemma":0.00025254453,"teacher_disagreement_score":0.0011045218,"about_ca_system_score_codex":0.00031034055,"about_ca_system_score_gemma":0.0003024346,"threshold_uncertainty_score":0.0036950111},"labels":[],"label_agreement":null},{"id":"W2121900331","doi":"10.1016/j.jaci.2010.09.021","title":"Innate signals from Nod2 block respiratory tolerance and program TH2-driven allergic inflammation","year":2010,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":91,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Institutes of Health","keywords":"Thymic stromal lymphopoietin; Immunology; NOD2; Pattern recognition receptor; Innate immune system; Acquired immune system; Immune tolerance; Innate lymphoid cell; Allergic inflammation; Inflammation; Biology; Medicine; Immune system","score_opus":0.01739700461109248,"score_gpt":0.30117560020643674,"score_spread":0.28377859559534424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121900331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891332,0.0028501744,0.0026474497,0.00068180956,0.00037368314,0.000093391835,0.00041629697,0.00021560604,0.0035884152],"genre_scores_gemma":[0.9925782,0.000794457,0.0019028458,0.00022399407,0.00010272942,0.00010372865,0.00041124463,0.00006205628,0.0038208417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999506,0.00010555898,0.000051302177,0.000054012136,0.000102661375,0.00018036457],"domain_scores_gemma":[0.9997745,0.00003528661,0.000037204638,0.000042001666,0.00001794669,0.000092995935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000590209,0.0006660895,0.0005506245,0.0002550091,0.0002757196,0.0007203261,0.00038664867,0.00069350965,0.0033259573],"category_scores_gemma":[0.0003673979,0.00029104884,0.00050707144,0.00010511166,0.0006627369,0.00066375046,0.000612423,0.0030293984,0.0010452977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001606778,0.00025071096,0.00023813677,0.00012781905,0.000017703209,0.00013015622,0.00002910022,0.00023140492,0.99287426,0.00043516597,0.00032279477,0.0037360133],"study_design_scores_gemma":[0.0010383847,0.0025873487,0.0061797434,0.000054097243,0.00007346077,0.0006690635,0.00016133444,0.0028268518,0.97666067,0.0005904723,0.009137023,0.000021550475],"about_ca_topic_score_codex":0.0002913398,"about_ca_topic_score_gemma":0.00077626074,"teacher_disagreement_score":0.0033259573,"about_ca_system_score_codex":0.00037312735,"about_ca_system_score_gemma":0.0005026296,"threshold_uncertainty_score":0.011126459},"labels":[],"label_agreement":null},{"id":"W2121915579","doi":"10.1139/o03-070","title":"Biosynthesis, transport, and modification of lipid A","year":2004,"lang":"en","type":"review","venue":"Biochemistry and Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Lipid A; Lipopolysaccharide; Bacteria; Bacterial outer membrane; Biochemistry; Gram-negative bacteria; Biosynthesis; Enzyme; Lipid signaling; Phospholipid; Biology; Chemistry; Escherichia coli; Gene; Membrane","score_opus":0.01645982113128894,"score_gpt":0.25316069106222455,"score_spread":0.23670086993093561,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121915579","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00061738107,0.99559397,0.0004555701,0.00020796273,0.000319529,0.000006880808,0.0000205783,0.00001636348,0.0027618117],"genre_scores_gemma":[0.001863937,0.99452657,0.0004926738,0.00011406673,0.00018441603,0.000010166491,0.000048116282,0.000002115522,0.0027578482],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998816,0.000014686186,0.000014615488,0.000026804837,0.000048203772,0.000014100823],"domain_scores_gemma":[0.9999182,0.000015536372,0.000015579328,0.0000046418245,0.000030480338,0.000015476366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025036762,0.00084203517,0.00092169485,0.0011826038,0.00030328464,0.0007114463,0.0006815295,0.0008340569,0.0019035863],"category_scores_gemma":[0.00026835361,0.0002510247,0.00021085591,0.0016291358,0.00035393526,0.0010406496,0.0004134353,0.0008175615,0.004074783],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116440235,0.0000963088,0.0002880044,0.007992589,0.000045702043,0.0004332578,0.000060386046,0.0005119173,0.017054433,0.003969141,0.02016374,0.949268],"study_design_scores_gemma":[0.0000132902915,0.00008996337,0.0010563266,0.00067364157,0.0000272323,0.0013425837,0.000037835176,0.00011373954,0.004199381,0.0014467037,0.9909875,0.00001187978],"about_ca_topic_score_codex":0.00091637834,"about_ca_topic_score_gemma":0.001066858,"teacher_disagreement_score":0.0019035863,"about_ca_system_score_codex":0.0006741732,"about_ca_system_score_gemma":0.00072948454,"threshold_uncertainty_score":0.0063681602},"labels":[],"label_agreement":null},{"id":"W2122017112","doi":"10.1152/ajpgi.00042.2011","title":"Aspirin-triggered lipoxin enhances macrophage phagocytosis of bacteria while inhibiting inflammatory cytokine production","year":2011,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; Indian Institute of Technology Bombay","keywords":"Lipoxin; Inflammation; Macrophage; Efferocytosis; Phagocytosis; Lipid signaling; Lipopolysaccharide; Cytokine; Biology; Immunology; Receptor; Chemistry; Microbiology; In vitro; Biochemistry","score_opus":0.012212091660893714,"score_gpt":0.20711722247080958,"score_spread":0.19490513080991587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122017112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981875,0.00073567923,0.0005325676,0.00003606971,0.000015259422,0.000018997776,0.00007936975,0.000015726282,0.00037889573],"genre_scores_gemma":[0.99694556,0.0005887396,0.0009193804,0.00004753097,0.000013780977,0.00003236756,0.00022217391,0.00000481255,0.0012255927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998374,0.00003762826,0.000018598139,0.000021897167,0.000038464976,0.00004590222],"domain_scores_gemma":[0.9999157,0.000016245955,0.000024368632,0.000009856396,0.000009545078,0.000024308842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017081185,0.00030678342,0.00034999504,0.00015250579,0.000108958404,0.00024954043,0.00012906446,0.00026340276,0.0011104711],"category_scores_gemma":[0.00011690998,0.00009803656,0.00026178965,0.00013038791,0.0001937635,0.00016116686,0.00021240623,0.0003822835,0.00023485665],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036454888,0.000042555217,0.00011116793,0.000033909313,0.0000033672409,0.000034816232,0.000015073811,0.000021605565,0.99875414,0.0000143955795,0.0000124798225,0.0005919778],"study_design_scores_gemma":[0.000050559367,0.003011336,0.0060504205,0.0000067539195,0.000018993715,0.00014462719,0.00003577167,0.00046929964,0.98939496,0.000020994372,0.00079193595,0.0000043591076],"about_ca_topic_score_codex":0.0003290984,"about_ca_topic_score_gemma":0.0006359181,"teacher_disagreement_score":0.0011104711,"about_ca_system_score_codex":0.00015037744,"about_ca_system_score_gemma":0.00018083505,"threshold_uncertainty_score":0.0037148595},"labels":[],"label_agreement":null},{"id":"W2122065046","doi":"10.4049/jimmunol.171.12.6680","title":"Soluble Forms of Toll-Like Receptor (TLR)2 Capable of Modulating TLR2 Signaling Are Present in Human Plasma and Breast Milk","year":2003,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":338,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Sanofi","keywords":"TLR2; Innate immune system; Cell biology; Receptor; CD14; Intracellular; Immune system; Biology; Toll-like receptor; Signal transduction; Lipopeptide; Immunology; Bacteria; Biochemistry","score_opus":0.010999524598389395,"score_gpt":0.22429335324915436,"score_spread":0.21329382865076496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122065046","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98600525,0.0083894795,0.0034146388,0.00023303741,0.00003861251,0.000025746658,0.0009900809,0.00012842796,0.00077475095],"genre_scores_gemma":[0.9928145,0.0014543763,0.0022334596,0.00013451545,0.00005028426,0.00003089129,0.0022550558,0.000014366565,0.0010125692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997687,0.000049146798,0.000026998472,0.00006290325,0.00005446045,0.000037789112],"domain_scores_gemma":[0.9998486,0.00002600923,0.00005618465,0.000017409127,0.00002499466,0.000026752852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022413002,0.00043181074,0.00027782004,0.00036862408,0.00011365941,0.00046448657,0.00013941003,0.0004960667,0.0013236683],"category_scores_gemma":[0.00047740247,0.0002080334,0.0002780649,0.000310198,0.0001476694,0.00015495149,0.00026294382,0.00026719252,0.00056570984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079682446,0.000034827004,0.0073308027,0.00012414122,0.000042339358,0.0007881829,0.00006263758,0.00007986964,0.983502,0.000106887186,0.00032174579,0.0068098935],"study_design_scores_gemma":[0.00033473395,0.0020685156,0.21225028,0.000080697006,0.00024369477,0.02300535,0.00046762562,0.004116332,0.73232657,0.0010862564,0.023959924,0.0000601162],"about_ca_topic_score_codex":0.00029326126,"about_ca_topic_score_gemma":0.00017576921,"teacher_disagreement_score":0.0013236683,"about_ca_system_score_codex":0.00015325563,"about_ca_system_score_gemma":0.00014647988,"threshold_uncertainty_score":0.0044280887},"labels":[],"label_agreement":null},{"id":"W2122293552","doi":"10.1183/09031936.00076210","title":"A mouse GM-CSF receptor antibody attenuates neutrophilia in mice exposed to cigarette smoke","year":2011,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; McMaster University","keywords":"Bronchoalveolar lavage; Inflammation; Antibody; Immunology; Neutrophilia; Receptor; CD11c; CD8; Chemistry; Medicine; Internal medicine; Lung; Immune system","score_opus":0.04024556008890375,"score_gpt":0.25530973078170777,"score_spread":0.215064170692804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122293552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962798,0.0012940913,0.0010444665,0.000209678,0.000056174442,0.000058464902,0.00018865612,0.00013043174,0.00073830097],"genre_scores_gemma":[0.9918258,0.0013646248,0.0017830665,0.00018138517,0.00004288705,0.000106753345,0.00039412966,0.00003764032,0.004263648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971455,0.00006140182,0.000022833168,0.000043645552,0.00006554024,0.000091970905],"domain_scores_gemma":[0.99972254,0.00003562937,0.000075448035,0.000030401105,0.000029274373,0.00010662509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003295417,0.00072820485,0.000516043,0.0005622132,0.00018638138,0.000307751,0.00036087172,0.00078848976,0.0010943965],"category_scores_gemma":[0.00022114675,0.00033603742,0.00031697558,0.00013947027,0.00041114027,0.0002931469,0.00020891397,0.001344569,0.00039743353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064766506,0.00038724372,0.00026605825,0.00003838848,0.000006763825,0.000060829334,0.000021064461,0.000043301792,0.996473,0.00005567924,0.000047688245,0.0019522907],"study_design_scores_gemma":[0.0002540117,0.0070414217,0.008490203,0.000027004084,0.000056961286,0.0003264858,0.000046528057,0.0012560624,0.9804968,0.00009030441,0.0019051232,0.000009172706],"about_ca_topic_score_codex":0.000634702,"about_ca_topic_score_gemma":0.0013489178,"teacher_disagreement_score":0.0010943965,"about_ca_system_score_codex":0.00025381037,"about_ca_system_score_gemma":0.0003379074,"threshold_uncertainty_score":0.0036611557},"labels":[],"label_agreement":null},{"id":"W2122363894","doi":"10.1165/rcmb.2003-0259oc","title":"Cigarette Smoke Decreases Pulmonary Dendritic Cells and Impacts Antiviral Immune Responsiveness","year":2003,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":179,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Immune system; CD8; Immunology; Smoke; Lung; Respiratory system; Antibody; Tobacco smoke; Acquired immune system; Virus; Biology; Medicine; Chemistry; Internal medicine","score_opus":0.006219094292105139,"score_gpt":0.23632889802050458,"score_spread":0.23010980372839945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122363894","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978243,0.0014360837,0.00021677901,0.00006408037,0.0000114043305,0.0000065691165,0.000051264877,0.000015353584,0.00037423117],"genre_scores_gemma":[0.99722606,0.0010049613,0.00023107609,0.00005678192,0.000012077179,0.000010704667,0.00014617188,0.000006369752,0.0013057644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981314,0.000046852423,0.000011401155,0.0000247874,0.000042545613,0.000061268714],"domain_scores_gemma":[0.9998047,0.000045572626,0.00004385955,0.000023982951,0.000020097299,0.00006182693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017753002,0.00027503906,0.0003088008,0.00014034944,0.000104170715,0.00034146965,0.00014993288,0.00042999868,0.0012200576],"category_scores_gemma":[0.0001858148,0.00017821249,0.00027811978,0.00006954458,0.00019758947,0.00013806281,0.00018434497,0.00045283505,0.00021217769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042243247,0.00010329382,0.00413928,0.000024520772,0.000013647215,0.00007517301,0.000015527006,0.000034779525,0.9925282,0.000040087492,0.000031881387,0.0025712394],"study_design_scores_gemma":[0.0001048004,0.004823472,0.20851395,0.000036167894,0.00013247394,0.0010729396,0.00014356642,0.001126089,0.7810085,0.00014212812,0.002884046,0.00001187633],"about_ca_topic_score_codex":0.00060755946,"about_ca_topic_score_gemma":0.0013321616,"teacher_disagreement_score":0.0012200576,"about_ca_system_score_codex":0.00016904494,"about_ca_system_score_gemma":0.00018030802,"threshold_uncertainty_score":0.0040814877},"labels":[],"label_agreement":null},{"id":"W2122417188","doi":"10.4049/jimmunol.174.1.340","title":"The Functional and Structural Properties of MD-2 Required for Lipopolysaccharide Binding Are Absent in MD-1","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Mutant; Chemistry; Lipopolysaccharide; Alanine; Binding site; Mutation; Biochemistry; Transmembrane protein; Transfection; Escherichia coli; Molecular biology; Gene; Biology; Amino acid; Receptor","score_opus":0.021808308360589015,"score_gpt":0.23383789008548833,"score_spread":0.21202958172489933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122417188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99782604,0.00036542557,0.0010720531,0.000057608908,0.000013889202,0.000010931702,0.00026352415,0.000011368972,0.00037912442],"genre_scores_gemma":[0.9959304,0.00013391816,0.0015132234,0.000049724353,0.000009554171,0.000023393583,0.0012598649,0.000015371044,0.0010647074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985933,0.00002187761,0.000018452845,0.00002179294,0.000048819944,0.00002968759],"domain_scores_gemma":[0.99980646,0.000039242317,0.000048562437,0.000018907429,0.000020929636,0.00006591045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000103850354,0.0003044069,0.00023172265,0.00015706799,0.00018346295,0.00025782763,0.00020977967,0.00025251755,0.0012790918],"category_scores_gemma":[0.00026456153,0.00015751719,0.00026843752,0.00011235735,0.00020950282,0.00015965004,0.0002745913,0.0005457326,0.0003759934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007534306,0.000017539442,0.00042395954,0.0000181082,0.0000027085384,0.00006563871,0.000007925673,0.00003742543,0.99896586,0.000060220897,0.000018308448,0.00030688572],"study_design_scores_gemma":[0.000026829397,0.00014986428,0.041151997,0.000012186269,0.000021401545,0.0010061874,0.000060211536,0.0018096014,0.9523894,0.00010510406,0.0032523149,0.0000148089],"about_ca_topic_score_codex":0.00047944143,"about_ca_topic_score_gemma":0.00039354368,"teacher_disagreement_score":0.0012790918,"about_ca_system_score_codex":0.0002772924,"about_ca_system_score_gemma":0.00016307038,"threshold_uncertainty_score":0.004278958},"labels":[],"label_agreement":null},{"id":"W2122489686","doi":"10.1016/j.vaccine.2009.05.094","title":"A novel vaccine adjuvant comprised of a synthetic innate defence regulator peptide and CpG oligonucleotide links innate and adaptive immunity","year":2009,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan; University of British Columbia; Dalhousie University; Izaak Walton Killam Health Centre; Institute of Infection and Immunity","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Cystic Fibrosis Foundation; Bill and Melinda Gates Foundation","keywords":"Adjuvant; CpG Oligodeoxynucleotide; Innate immune system; Immunology; Biology; Chemokine; Immune system; CpG site; Acquired immune system; Toxoid; TLR9; Immunization; DNA methylation; Gene expression","score_opus":0.009804206835505489,"score_gpt":0.22054689245737324,"score_spread":0.21074268562186776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122489686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9569968,0.003772138,0.034863897,0.00054636714,0.00052046136,0.00019515843,0.00016199118,0.00022983224,0.0027134304],"genre_scores_gemma":[0.9624249,0.00157085,0.031594776,0.00031996798,0.00011361199,0.00010520727,0.00024913807,0.000021480599,0.0036001308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999082,0.000017125034,0.0000073573183,0.000017211105,0.00002665942,0.000023372102],"domain_scores_gemma":[0.9999238,0.000016518145,0.000015267262,0.000006355055,0.000015532698,0.000022547847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024282387,0.00042147323,0.0003440008,0.00020249015,0.000117540985,0.00023966927,0.00023267661,0.0004864916,0.0009844735],"category_scores_gemma":[0.00019382892,0.00015936593,0.00017951871,0.00009819281,0.00019398495,0.0003620949,0.00033719218,0.0006224283,0.0003479943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020001245,0.00016151581,0.0001458567,0.00007238287,0.0000063252332,0.00006392958,0.000008099067,0.00026690756,0.98924166,0.0004052568,0.00012499877,0.009303031],"study_design_scores_gemma":[0.00020781363,0.0034381526,0.00091558154,0.000024537916,0.00006615627,0.0007596535,0.000018953348,0.004057088,0.9816404,0.00036619714,0.008492221,0.000013304212],"about_ca_topic_score_codex":0.00011540263,"about_ca_topic_score_gemma":0.00029745634,"teacher_disagreement_score":0.0009844735,"about_ca_system_score_codex":0.00017093096,"about_ca_system_score_gemma":0.00038590556,"threshold_uncertainty_score":0.0032933354},"labels":[],"label_agreement":null},{"id":"W2122994961","doi":"10.1128/mcb.00087-10","title":"Zinc Finger Protein Gfi1 Controls the Endotoxin-Mediated Toll-Like Receptor Inflammatory Response by Antagonizing NF-κB p65","year":2010,"lang":"en","type":"article","venue":"Molecular and Cellular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft","keywords":"Biology; Transactivation; Proinflammatory cytokine; Tumor necrosis factor alpha; Innate immune system; Toll-like receptor; Transcription factor; NFKB1; Cell biology; Molecular biology; TLR4; Nuclear protein; Zinc finger; Signal transduction; Immunology; Immune system; Inflammation; Gene; Genetics","score_opus":0.0031358172196794165,"score_gpt":0.19264149083955917,"score_spread":0.18950567361987974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122994961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9903045,0.0029240877,0.004506716,0.0001419126,0.000031879506,0.000013492621,0.00023838686,0.00021560378,0.0016233402],"genre_scores_gemma":[0.99430954,0.0008473783,0.0017857443,0.00004309712,0.00001212358,0.00001542032,0.00019768055,0.000026915195,0.0027621116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999176,0.0000117860245,0.0000031908771,0.00002365904,0.000015384707,0.000028351478],"domain_scores_gemma":[0.99990475,0.000012303428,0.000037225953,0.000008013281,0.000010749483,0.000026998388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102210535,0.00049589557,0.00019903296,0.00018499717,0.00015326573,0.00027125882,0.0002598676,0.00019519038,0.00068811147],"category_scores_gemma":[0.00014802649,0.00009667559,0.000109284716,0.00008638927,0.00037995534,0.00015011182,0.00019898951,0.0002716548,0.00034769764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112595495,0.000010656438,0.0002601403,0.000015774855,0.0000016099344,0.000053016694,0.000008006338,0.000059273476,0.998209,0.00010697417,0.000037068527,0.001125868],"study_design_scores_gemma":[0.000027064913,0.00018500946,0.0116000315,0.000007033235,0.000011601706,0.0003918821,0.000041887746,0.0023937197,0.98136616,0.00022255124,0.00374637,0.000006838202],"about_ca_topic_score_codex":0.0006105976,"about_ca_topic_score_gemma":0.00060631376,"teacher_disagreement_score":0.00068811147,"about_ca_system_score_codex":0.00046390804,"about_ca_system_score_gemma":0.00018358245,"threshold_uncertainty_score":0.0033658743},"labels":[],"label_agreement":null},{"id":"W2123087827","doi":"10.1084/jem.20051229","title":"Nod1 acts as an intracellular receptor to stimulate chemokine production and neutrophil recruitment in vivo","year":2006,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":210,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"NOD1; Chemokine; Cell biology; Innate immune system; Biology; Tumor necrosis factor alpha; Proinflammatory cytokine; Immune system; Immunology; Inflammation; Pattern recognition receptor; NOD2","score_opus":0.021492507417701427,"score_gpt":0.2919707630830819,"score_spread":0.2704782556653805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123087827","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853735,0.005548532,0.0041957255,0.00026160252,0.00009037172,0.00009163219,0.0007173041,0.0001564757,0.0035648483],"genre_scores_gemma":[0.98486507,0.0022385088,0.005153816,0.00020081089,0.00004713758,0.00015998806,0.0014868592,0.00003331861,0.0058146114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967885,0.00010649625,0.000018871673,0.000042990803,0.00005584085,0.00009696789],"domain_scores_gemma":[0.9997824,0.000046105975,0.00005111699,0.00002557701,0.000017060338,0.00007779869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043905183,0.0005522504,0.00028702532,0.0003112891,0.0001478107,0.00032621957,0.00014314598,0.00025271796,0.0027928927],"category_scores_gemma":[0.00022104115,0.00017927053,0.00021396793,0.000110152476,0.0002883138,0.00021654984,0.0002876823,0.00061687187,0.0010042518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035677935,0.00006290249,0.00021011534,0.00007003868,0.0000036917804,0.00006236175,0.0000072503854,0.000042489766,0.99702865,0.00008424728,0.00012021161,0.0019512577],"study_design_scores_gemma":[0.00018801261,0.002087009,0.01019584,0.000025638217,0.000019396588,0.0011282447,0.00004048831,0.001382716,0.9783407,0.0001901581,0.006390018,0.000011767609],"about_ca_topic_score_codex":0.00014590807,"about_ca_topic_score_gemma":0.0003145228,"teacher_disagreement_score":0.0027928927,"about_ca_system_score_codex":0.0002906315,"about_ca_system_score_gemma":0.00021717284,"threshold_uncertainty_score":0.009343147},"labels":[],"label_agreement":null},{"id":"W2123947085","doi":"10.1128/iai.72.11.6455-6462.2004","title":"Role of Protein Tyrosine Kinase p53/56<i><sup>lyn</sup></i>in Diminished Lipopolysaccharide Priming of Formylmethionylleucyl- phenylalanine-Induced Superoxide Production in Human Newborn Neutrophils","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"IWK Health Centre; Sick Kids Foundation; Canadian Institutes of Health Research; Abbott Laboratories","keywords":"LYN; Tyrosine; Kinase; Biology; Lipopolysaccharide; Proto-oncogene tyrosine-protein kinase Src; p38 mitogen-activated protein kinases; Tyrosine phosphorylation; Tyrosine kinase; Syk; Phosphorylation; Superoxide; Protein kinase A; Molecular biology; Biochemistry; Immunology; Signal transduction; Enzyme","score_opus":0.013038327634852437,"score_gpt":0.24435137216952627,"score_spread":0.23131304453467383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2123947085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99720794,0.0016647899,0.0004880978,0.0000651145,0.000013488842,0.000011121341,0.00010525925,0.000016305257,0.00042798603],"genre_scores_gemma":[0.9980186,0.00053729163,0.0005322168,0.000035979443,0.000009379177,0.0000224951,0.00021687127,0.0000061910923,0.0006209243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986744,0.000027904993,0.000019205745,0.000023934625,0.000025350133,0.000036173962],"domain_scores_gemma":[0.9999076,0.000013502767,0.000026887155,0.000010578923,0.000009175486,0.00003215523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018676813,0.00030169045,0.00028669168,0.000111124136,0.00013896794,0.0002841647,0.00015055032,0.00026348865,0.0010201217],"category_scores_gemma":[0.0001475281,0.00012622325,0.00023365057,0.00006941935,0.00022225842,0.00019346444,0.00019751584,0.00039464427,0.0003588389],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036258632,0.000019568275,0.0004741298,0.00003140453,0.000004014558,0.0001831865,0.000015458698,0.00002037295,0.998035,0.000042629013,0.000017786017,0.0007937409],"study_design_scores_gemma":[0.00003958243,0.0005808009,0.030473268,0.000010369054,0.000029003842,0.0012792271,0.00005961097,0.0007672022,0.9657896,0.000039105016,0.0009274205,0.0000048698157],"about_ca_topic_score_codex":0.00026473487,"about_ca_topic_score_gemma":0.00024253535,"teacher_disagreement_score":0.0010201217,"about_ca_system_score_codex":0.00017404792,"about_ca_system_score_gemma":0.00016456773,"threshold_uncertainty_score":0.003412664},"labels":[],"label_agreement":null},{"id":"W2124032393","doi":"10.1084/jem.20060943","title":"Oxidative stress generated by hemorrhagic shock recruits Toll-like receptor 4 to the plasma membrane in macrophages","year":2006,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":198,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; St. Michael's Hospital","funders":"","keywords":"Oxidative stress; TLR4; Lipid raft; Cell biology; Lipopolysaccharide; Toll-like receptor; Biology; Innate immune system; Receptor; Chemistry; Immunology; Signal transduction; Biochemistry","score_opus":0.011285420418352805,"score_gpt":0.25841408076750566,"score_spread":0.24712866034915285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124032393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959351,0.0010880615,0.0021347972,0.00016513157,0.00002871845,0.000018076502,0.00007222166,0.00003422469,0.0005236836],"genre_scores_gemma":[0.9957235,0.0009911128,0.0016791569,0.000093126546,0.000032970052,0.00004606635,0.00016232375,0.000007971276,0.0012636976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998455,0.000041884723,0.000014209386,0.000020342266,0.000031136886,0.00004693095],"domain_scores_gemma":[0.9999039,0.000013735342,0.000024979812,0.000019358005,0.000018041324,0.000019999294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029912117,0.00027361626,0.00023393457,0.0003276752,0.00021887076,0.00025829265,0.00016272959,0.00040338,0.0010406863],"category_scores_gemma":[0.00020658196,0.0002287421,0.0002715973,0.00012012708,0.00026698166,0.00028958684,0.00033532744,0.0004338978,0.00044753015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036079172,0.00002423248,0.00034505458,0.000028500826,0.0000033076562,0.000088764435,0.000019487044,0.000025571888,0.9980399,0.00005974283,0.00002810934,0.0009766105],"study_design_scores_gemma":[0.00012528471,0.0009489574,0.022081703,0.00001517175,0.000029818777,0.0008564106,0.00017569163,0.0011952011,0.97232157,0.00042579844,0.0018135401,0.000010828883],"about_ca_topic_score_codex":0.00013941602,"about_ca_topic_score_gemma":0.0001283804,"teacher_disagreement_score":0.0010406863,"about_ca_system_score_codex":0.00019961451,"about_ca_system_score_gemma":0.00014611914,"threshold_uncertainty_score":0.0034815073},"labels":[],"label_agreement":null},{"id":"W2124202577","doi":"10.3945/jn.109.109645","title":"A Bovine Whey Protein Extract Stimulates Human Neutrophils to Generate Bioactive IL-1Ra through a NF-κB- and MAPK-Dependent Mechanism","year":2009,"lang":"en","type":"article","venue":"Journal of Nutrition","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"p38 mitogen-activated protein kinases; Tumor necrosis factor alpha; MAPK/ERK pathway; Chemotaxis; Phagocytosis; Degranulation; Kinase; Protein kinase A; Interleukin; Stimulation; Chemistry; Cytokine; Receptor; Cell biology; Immunology; Biology; Biochemistry; Endocrinology","score_opus":0.015407117691638625,"score_gpt":0.2645161705551759,"score_spread":0.24910905286353727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124202577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99257386,0.0029636365,0.0017607023,0.00042284286,0.00012461316,0.00011534696,0.00045837788,0.000032520154,0.0015481825],"genre_scores_gemma":[0.9937273,0.0010708545,0.0016223984,0.00015937671,0.0000592513,0.00006632022,0.0007148973,0.000008433294,0.0025712198],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983215,0.00005106768,0.000013562079,0.000026459731,0.000031664407,0.000044991495],"domain_scores_gemma":[0.9999136,0.000031956348,0.000012632286,0.000011225524,0.000012200772,0.000018396966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027133667,0.0005124266,0.00025741034,0.00012553751,0.00013091041,0.0002446227,0.00012270968,0.00034101616,0.0025185163],"category_scores_gemma":[0.00028600724,0.00013797448,0.00037450096,0.00007614618,0.000138896,0.0001878601,0.00025834315,0.0005357009,0.00061824336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008544976,0.00021727249,0.00059016934,0.000107124775,0.0000113104825,0.00021086386,0.000050127514,0.00004697517,0.9944607,0.000044053566,0.00019330753,0.0032136054],"study_design_scores_gemma":[0.00040951127,0.0030903695,0.040663905,0.00005555399,0.0000735244,0.001542909,0.00017551942,0.0014358778,0.94606584,0.00016106661,0.006311322,0.000014578844],"about_ca_topic_score_codex":0.00058966107,"about_ca_topic_score_gemma":0.0009584133,"teacher_disagreement_score":0.0025185163,"about_ca_system_score_codex":0.00019022587,"about_ca_system_score_gemma":0.00021913115,"threshold_uncertainty_score":0.008425236},"labels":[],"label_agreement":null},{"id":"W2124224077","doi":"10.1101/gad.1467606","title":"Endotoxic shock in <i>AUF1</i> knockout mice mediated by failure to degrade proinflammatory cytokine mRNAs","year":2006,"lang":"en","type":"article","venue":"Genes & Development","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":197,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Center for AIDS Research, University of Washington; York University","keywords":"Biology; Proinflammatory cytokine; Cell biology; Cytokine; Knockout mouse; Context (archaeology); Shock (circulatory); Immunology; Inflammation; Genetics; Gene; Internal medicine","score_opus":0.004704736672963363,"score_gpt":0.19431535513425516,"score_spread":0.1896106184612918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124224077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886157,0.0008518071,0.006759783,0.0003414751,0.00008164362,0.000040495117,0.0013399721,0.0004351626,0.0015339893],"genre_scores_gemma":[0.97857237,0.001004419,0.006484161,0.00025522578,0.00005466317,0.00011334446,0.001965483,0.00045304417,0.011097218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959475,0.00006144895,0.000067531924,0.00010498624,0.000086296925,0.00008504875],"domain_scores_gemma":[0.99919266,0.00011265722,0.000367572,0.00005950415,0.00004339803,0.00022423887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029981323,0.0009095719,0.00053239136,0.00090326427,0.00031672002,0.0006796949,0.0004201062,0.0007611629,0.003333518],"category_scores_gemma":[0.00028101922,0.00048070418,0.00038474478,0.00025173678,0.0010505203,0.00037443973,0.0003424434,0.0014612986,0.0009755819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026923412,0.000060008235,0.00023422806,0.000038020178,0.000010505987,0.00014503315,0.000024746954,0.00007420359,0.9979665,0.00026025428,0.00008839561,0.00082895433],"study_design_scores_gemma":[0.0001430156,0.00076003594,0.008635813,0.00003870341,0.00007024476,0.0025099313,0.000118212505,0.0018844854,0.98127514,0.0002594429,0.004277023,0.00002790197],"about_ca_topic_score_codex":0.00074898306,"about_ca_topic_score_gemma":0.0007894408,"teacher_disagreement_score":0.003333518,"about_ca_system_score_codex":0.00046075304,"about_ca_system_score_gemma":0.00028414058,"threshold_uncertainty_score":0.011151671},"labels":[],"label_agreement":null},{"id":"W2124371255","doi":"10.1016/j.cell.2006.01.034","title":"Anti-Immunology: Evasion of the Host Immune System by Bacterial and Viral Pathogens","year":2006,"lang":"en","type":"review","venue":"Cell","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":898,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Biology; Evasion (ethics); Immune system; Host (biology); Immunology; Virology; Microbiology; Immunity; Ecology","score_opus":0.0086299476846329,"score_gpt":0.21753184277870474,"score_spread":0.20890189509407184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124371255","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000074798314,0.99694353,0.00034022654,0.00040575638,0.0012054293,0.0000050144063,0.000009041517,0.000011584553,0.0010046068],"genre_scores_gemma":[0.0006254974,0.9954802,0.00036709622,0.00046772638,0.0014235855,0.000009522686,0.000025881494,0.000002401722,0.0015981299],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99971527,0.000041960262,0.000033538032,0.000048427875,0.00013227007,0.000028599708],"domain_scores_gemma":[0.99954706,0.00017682779,0.000053205193,0.000016626449,0.00013051563,0.00007570374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091750576,0.0018806126,0.0024121671,0.0020407788,0.0005090922,0.0019373999,0.0018337902,0.0025137018,0.0030333877],"category_scores_gemma":[0.0006748163,0.000424136,0.0003635726,0.0025535345,0.0014349007,0.002767301,0.0009462021,0.003800275,0.00393086],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016675107,0.00009739527,0.0001459595,0.0073689604,0.000052291965,0.00035568335,0.000060937706,0.0003322024,0.0047719567,0.005066255,0.07286557,0.9087161],"study_design_scores_gemma":[0.000023561339,0.00007048326,0.00032266308,0.0008979128,0.000037578986,0.0018139374,0.00004711789,0.0000815764,0.0007764638,0.002498765,0.99341524,0.000014572463],"about_ca_topic_score_codex":0.0006996798,"about_ca_topic_score_gemma":0.0014084184,"teacher_disagreement_score":0.0030333877,"about_ca_system_score_codex":0.00090001436,"about_ca_system_score_gemma":0.0009858881,"threshold_uncertainty_score":0.01014775},"labels":[],"label_agreement":null},{"id":"W2124424618","doi":"10.1124/jpet.106.113639","title":"Phosphatidylinositol 3′-Kinase Is a Critical Mediator of Interferon-γ-Induced Increases in Enteric Epithelial Permeability","year":2006,"lang":"en","type":"article","venue":"Journal of Pharmacology and Experimental Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Paracellular transport; Wortmannin; Barrier function; Protein kinase C; Transcytosis; Epithelium; Phosphatidylinositol; Transcellular; Intracellular; Chemistry; Ionomycin; Cell biology; Tight junction; Apical membrane; Biology; Molecular biology; Biochemistry; Biophysics; Signal transduction; Endocytosis; Permeability (electromagnetism); Cell; Membrane","score_opus":0.016044840398866955,"score_gpt":0.3213328915839945,"score_spread":0.30528805118512753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124424618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98437566,0.0063786074,0.00511572,0.00065275055,0.000109646535,0.00005399182,0.00041161297,0.00010745669,0.002794635],"genre_scores_gemma":[0.9951674,0.0015300015,0.0015812186,0.000073530966,0.000020111354,0.00002660224,0.00023948798,0.000015330585,0.0013463104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998272,0.000032764547,0.00001646647,0.000027607095,0.000037016154,0.000058956553],"domain_scores_gemma":[0.9998431,0.000017811373,0.00005694831,0.00001937903,0.000023361132,0.00003927888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028867385,0.00035833055,0.0002904728,0.0002554208,0.0002658825,0.0005178457,0.000283133,0.00042903688,0.0016600548],"category_scores_gemma":[0.0002822845,0.0002517663,0.0004777004,0.0001401324,0.00027342327,0.0005588284,0.00034047934,0.0012818757,0.00049576676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001874194,0.000042154952,0.00037459936,0.00007419495,0.000011813277,0.00019645337,0.000020236934,0.000063476815,0.9943534,0.0002766516,0.00008065053,0.002632201],"study_design_scores_gemma":[0.00014130786,0.0004549149,0.033442125,0.000024885036,0.00005996559,0.0007507002,0.00012383872,0.0013335025,0.9601384,0.0005400858,0.0029762534,0.000013947729],"about_ca_topic_score_codex":0.0003692438,"about_ca_topic_score_gemma":0.00032952288,"teacher_disagreement_score":0.0016600548,"about_ca_system_score_codex":0.00068977324,"about_ca_system_score_gemma":0.000315615,"threshold_uncertainty_score":0.0055534244},"labels":[],"label_agreement":null},{"id":"W2124645471","doi":"10.1093/cvr/cvm100","title":"Disruption of phospholipase C 1 signalling attenuates cardiac tumor necrosis factor-  expression and improves myocardial function during endotoxemia","year":2007,"lang":"en","type":"article","venue":"Cardiovascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Tumor necrosis factor alpha; Phospholipase C; Biology; Endocrinology; Signal transduction; Internal medicine; Gene knockdown; Cancer research; Immunology; Cell biology; Medicine; Cell culture","score_opus":0.02304278883768103,"score_gpt":0.27710717392109735,"score_spread":0.25406438508341633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2124645471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963025,0.0016860772,0.0010290166,0.00016575665,0.000047249152,0.000031462958,0.00016096265,0.00010792998,0.00046906888],"genre_scores_gemma":[0.9951308,0.0014711502,0.0010400681,0.000120954035,0.000027255735,0.000075754506,0.0003232653,0.000021235292,0.0017896428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987686,0.000018566992,0.000013304469,0.000022097369,0.000020667672,0.00004845534],"domain_scores_gemma":[0.999859,0.000011931434,0.00005890717,0.000012661012,0.000010046507,0.000047511025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015247757,0.00072062615,0.0005226486,0.00021542767,0.00023811041,0.0003509652,0.00029121287,0.00038238376,0.0013013708],"category_scores_gemma":[0.00016616502,0.00015846538,0.00023090377,0.00016953115,0.0004714334,0.00029283407,0.00021220623,0.0010514045,0.00028424166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002487967,0.00025100308,0.0002799386,0.00009523759,0.000017383316,0.0001040037,0.000022735127,0.00015403329,0.99227613,0.00010722157,0.00011859158,0.004085805],"study_design_scores_gemma":[0.0005319699,0.0036337406,0.007949618,0.000029406321,0.000098529046,0.00037219777,0.00009614378,0.0012686775,0.9830897,0.00011332829,0.002801817,0.000014868286],"about_ca_topic_score_codex":0.00043480826,"about_ca_topic_score_gemma":0.00065660337,"teacher_disagreement_score":0.0013013708,"about_ca_system_score_codex":0.0003467696,"about_ca_system_score_gemma":0.00042187583,"threshold_uncertainty_score":0.0043535233},"labels":[],"label_agreement":null},{"id":"W2125377218","doi":"10.1139/cjm-2013-0490","title":"The sugar 3-deoxy-<scp>d</scp>-<i>manno</i>-oct-2-ulosonic acid (Kdo) as a characteristic component of bacterial endotoxin — a review of its biosynthesis, function, and placement in the lipopolysaccharide core","year":2013,"lang":"en","type":"review","venue":"Canadian Journal of Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipid A; Biosynthesis; Lipopolysaccharide; Glucosamine; Chemistry; Sugar; Bacteria; Biochemistry; Function (biology); Microbiology; Stereochemistry; Biology; Enzyme; Cell biology; Immunology","score_opus":0.023008358052746012,"score_gpt":0.24905098311638077,"score_spread":0.22604262506363476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125377218","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029153127,0.99806255,0.00013717207,0.0001186581,0.00019907476,0.0000034374993,0.000018636614,0.000007285317,0.0011616191],"genre_scores_gemma":[0.001509227,0.99719304,0.0002455349,0.000084484134,0.0001152808,0.000004026301,0.000049290393,0.0000016290147,0.0007975302],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999069,0.000012179416,0.000012742392,0.000019514804,0.00003762,0.000011036416],"domain_scores_gemma":[0.99987555,0.00003124956,0.000023700612,0.0000047243357,0.00004530864,0.000019397208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021973747,0.0006180148,0.0007302006,0.0017391614,0.00019751432,0.0006038066,0.0005058274,0.0005177058,0.0021741425],"category_scores_gemma":[0.0003027121,0.00017041426,0.00026259234,0.0020820561,0.00035103847,0.0008626169,0.0003521716,0.0008251608,0.0023198095],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085908905,0.00005833602,0.00030586476,0.011958217,0.000059952756,0.0002413328,0.00005434674,0.00027716797,0.007459558,0.0025008216,0.021041535,0.95595706],"study_design_scores_gemma":[0.000007709527,0.00008185703,0.0009101695,0.0009817525,0.000055757104,0.0013045162,0.00005108724,0.000048543523,0.0019753433,0.0007046709,0.9938625,0.000016208767],"about_ca_topic_score_codex":0.0014952131,"about_ca_topic_score_gemma":0.0021494513,"teacher_disagreement_score":0.0021741425,"about_ca_system_score_codex":0.0004810418,"about_ca_system_score_gemma":0.00079394545,"threshold_uncertainty_score":0.007273197},"labels":[],"label_agreement":null},{"id":"W2125760444","doi":"10.1164/rccm.200708-1261oc","title":"Lung Inflammation Induced by Lipoteichoic Acid or Lipopolysaccharide in Humans","year":2008,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lipoteichoic acid; Bronchoalveolar lavage; TLR4; Lipopolysaccharide; TLR2; Inflammation; Medicine; Immunology; Cytokine; Proinflammatory cytokine; In vivo; Microbiology; Lung; Biology; Staphylococcus aureus; Bacteria; Internal medicine","score_opus":0.018255069898202483,"score_gpt":0.29595677510590707,"score_spread":0.2777017052077046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125760444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920185,0.004926961,0.0008369469,0.000092820475,0.00003913029,0.00006659619,0.00024148625,0.000017012364,0.0017604994],"genre_scores_gemma":[0.99764985,0.0011668224,0.0002288055,0.00011900661,0.000049415503,0.000046502304,0.00020890056,0.0000028104637,0.0005278868],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998381,0.000054698525,0.000009985557,0.00005083427,0.000018106857,0.000028142562],"domain_scores_gemma":[0.9998647,0.000030683703,0.00003630007,0.000012732087,0.000008075968,0.000047456593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028750955,0.0003715868,0.0003678886,0.0003272837,0.0003303536,0.00027264727,0.00007761815,0.00033832033,0.0021494247],"category_scores_gemma":[0.0003115076,0.0001375675,0.00019990097,0.00022360602,0.00037773783,0.00020501121,0.00023396332,0.00026952437,0.0004388598],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011820832,0.0017573937,0.8309218,0.0007374329,0.00031284307,0.0092655225,0.0006443593,0.00027736934,0.103831306,0.0006570236,0.0012175983,0.03855651],"study_design_scores_gemma":[0.00025108524,0.013083638,0.96017814,0.00013911039,0.00018670158,0.014153357,0.000533139,0.00032288735,0.0053353067,0.00045627635,0.005326227,0.00003405956],"about_ca_topic_score_codex":0.00021792267,"about_ca_topic_score_gemma":0.00015002012,"teacher_disagreement_score":0.0021494247,"about_ca_system_score_codex":0.00011693796,"about_ca_system_score_gemma":0.00013850545,"threshold_uncertainty_score":0.007190585},"labels":[],"label_agreement":null},{"id":"W2126479453","doi":"10.1189/jlb.0809546","title":"Granulocyte-macrophage colony-stimulating factor (GM-CSF): a chemoattractive agent for murine leukocytes in vivo","year":2011,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Kuwait University; Canadian Institutes of Health Research; Conselho Nacional de Desenvolvimento Científico e Tecnológico; Australasian Society of Clinical Immunology and Allergy","keywords":"In vivo; Intravital microscopy; Inflammation; Granulocyte; Biology; In vitro; Immunology; Chemotaxis; Granulocyte macrophage colony-stimulating factor; N-Formylmethionine leucyl-phenylalanine; Molecular biology; Cytokine; Neutrophile; Receptor; Biochemistry","score_opus":0.043864832525031774,"score_gpt":0.287000142973544,"score_spread":0.24313531044851222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126479453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9562868,0.010261019,0.026675034,0.00080040534,0.00030305694,0.00044560758,0.0016295592,0.00055881694,0.003039761],"genre_scores_gemma":[0.9634998,0.0038897991,0.025364101,0.00022844705,0.000086751475,0.0004959976,0.0018943768,0.00007673664,0.0044640144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939024,0.00020663042,0.00006251399,0.00010778461,0.000111446,0.0001213856],"domain_scores_gemma":[0.9997677,0.00003385411,0.000059214944,0.000036728707,0.000024639729,0.000077796656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005601699,0.0011919888,0.0004033877,0.00062642666,0.00025806078,0.00036264918,0.00032319204,0.00093361177,0.0007729288],"category_scores_gemma":[0.00015666295,0.00022992767,0.0004325717,0.00025895794,0.00042137763,0.0003079961,0.00038932316,0.0013471402,0.0007108966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024346291,0.00007176997,0.00009120643,0.00006137055,0.0000024156684,0.000043344313,0.000016538514,0.00004412731,0.99809283,0.000060563478,0.00006668848,0.0012057801],"study_design_scores_gemma":[0.000031351665,0.00065805844,0.0007644007,0.000012159636,0.000009580412,0.00017241493,0.0000067254173,0.0002921607,0.9959323,0.000021407195,0.0020962923,0.0000031109805],"about_ca_topic_score_codex":0.0004716653,"about_ca_topic_score_gemma":0.0006328075,"teacher_disagreement_score":0.0011919888,"about_ca_system_score_codex":0.00028928716,"about_ca_system_score_gemma":0.00030173102,"threshold_uncertainty_score":0.00296247},"labels":[],"label_agreement":null},{"id":"W2126739732","doi":"10.1371/journal.pone.0055876","title":"Kinetics of IL-7 and IL-15 Levels after Allogeneic Peripheral Blood Stem Cell Transplantation following Nonmyeloablative Conditioning","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds De La Recherche Scientifique - FNRS; Fondation contre le Cancer; Terry Fox Foundation","keywords":"Transplantation; Medicine; Internal medicine; Conditioning; Stem cell; Immunology; Andrology; Gastroenterology; Biology","score_opus":0.016533311297537476,"score_gpt":0.198041168418813,"score_spread":0.18150785712127554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2126739732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993772,0.00030052377,0.00012465591,0.0000072011085,0.0000025968184,0.0000055556666,0.000033566266,0.0000069903317,0.00014182637],"genre_scores_gemma":[0.99952066,0.00006833,0.00009624934,0.000011840153,0.0000052746245,0.0000081287835,0.00015098945,0.000002638033,0.00013591559],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99974006,0.000054078188,0.000017355469,0.000043295033,0.000079717,0.00006536563],"domain_scores_gemma":[0.9992587,0.00020222494,0.00025766288,0.00003607744,0.00007742628,0.00016791197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030757178,0.00026538788,0.0004278445,0.0003161251,0.00016152099,0.0005189209,0.0001426889,0.00023272522,0.0008363823],"category_scores_gemma":[0.0010691436,0.000114820104,0.00015959858,0.0002430905,0.0002545124,0.00021582817,0.00019643796,0.0003976194,0.00025731415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011459559,0.00037563342,0.742537,0.00012881453,0.00013311589,0.0018549425,0.0008115592,0.00088939175,0.2075509,0.00012274593,0.00029182102,0.033844475],"study_design_scores_gemma":[0.00013894273,0.0075122626,0.9045197,0.000023328997,0.00016859935,0.0030288408,0.0002724869,0.001842502,0.08103401,0.00009289991,0.001343264,0.000023128317],"about_ca_topic_score_codex":0.0003458099,"about_ca_topic_score_gemma":0.00035795209,"teacher_disagreement_score":0.0008363823,"about_ca_system_score_codex":0.0002705176,"about_ca_system_score_gemma":0.00016910589,"threshold_uncertainty_score":0.0027979612},"labels":[],"label_agreement":null},{"id":"W2127088766","doi":"10.1016/j.jim.2008.04.013","title":"Polychromatic flow cytometric high-throughput assay to analyze the innate immune response to Toll-like receptor stimulation","year":2008,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; Canadian Child Health Clinician Scientist Program; National Center for Research Resources; Burroughs Wellcome Fund","keywords":"Innate immune system; Flow cytometry; TLR3; Toll-like receptor; Immune system; TLR7; Immunology; Acquired immune system; Biology; Cytometry; TLR9","score_opus":0.02966885487559169,"score_gpt":0.3344316338678644,"score_spread":0.3047627789922727,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127088766","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09566553,0.0018754101,0.88100344,0.00056461047,0.00042552894,0.001159493,0.0056554168,0.0052707745,0.008379802],"genre_scores_gemma":[0.25952148,0.002899094,0.68925005,0.0013361248,0.00050951797,0.0059755454,0.009757732,0.0006096219,0.030140772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980223,0.0004495852,0.000095312535,0.00040542296,0.000869965,0.00015740898],"domain_scores_gemma":[0.99900466,0.00041586024,0.00008520363,0.00015904961,0.0002589637,0.000076304255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014746814,0.0011884096,0.0010242385,0.0017620567,0.00079593237,0.001198093,0.001733721,0.0010366051,0.008064066],"category_scores_gemma":[0.0008937939,0.0005410314,0.0005966361,0.0013291681,0.0004585255,0.0007875534,0.00081727526,0.0026214498,0.003981996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003056017,0.00026304295,0.00042297857,0.00013811114,0.00003403634,0.000022946655,0.00002106304,0.0004115035,0.98277366,0.00079364475,0.0019730327,0.012840313],"study_design_scores_gemma":[0.00007621918,0.00034562114,0.0029707416,0.000016898346,0.00005900381,0.00020313797,0.00001234062,0.023506029,0.9648286,0.00063624076,0.0073078983,0.000037209087],"about_ca_topic_score_codex":0.0005835284,"about_ca_topic_score_gemma":0.0016566828,"teacher_disagreement_score":0.008064066,"about_ca_system_score_codex":0.0007944249,"about_ca_system_score_gemma":0.0006223159,"threshold_uncertainty_score":0.026977003},"labels":[],"label_agreement":null},{"id":"W2127094590","doi":"10.1111/iji.12175","title":"The Pekin duck programmed death‐ligand 1: <scp>cDNA</scp> cloning, genomic structure, molecular characterization and <scp>mRNA</scp> expression analysis","year":2014,"lang":"en","type":"article","venue":"International Journal of Immunogenetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Liver Foundation","keywords":"Complementary DNA; Biology; Coding region; Molecular biology; Peptide sequence; Exon; Conserved sequence; Messenger RNA; Amino acid; Gene; Genetics","score_opus":0.005178539084195292,"score_gpt":0.22569110256292127,"score_spread":0.22051256347872597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127094590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804314,0.0016427615,0.01276073,0.0001684088,0.000034194556,0.000059816924,0.0028278308,0.0001248354,0.0019501029],"genre_scores_gemma":[0.95745367,0.0014003001,0.018026685,0.00010958002,0.000020076417,0.00008068582,0.010286824,0.000076457094,0.012545782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993026,0.0000055542105,0.00000540999,0.000029760113,0.00001658964,0.0000124325215],"domain_scores_gemma":[0.999908,0.000016702297,0.000025296677,0.000008365108,0.000018349554,0.00002329608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000053782525,0.0002735148,0.00015424685,0.00021459842,0.00022429017,0.00031630602,0.00017671767,0.00021786948,0.0012268282],"category_scores_gemma":[0.000100162804,0.00014110869,0.00015669537,0.00013662314,0.00021902838,0.00017141375,0.00021424127,0.0005112752,0.00074953825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005124135,0.000007975105,0.00042262004,0.000042729967,0.000002047173,0.00011264784,0.000026514186,0.00010401902,0.9963368,0.00009351971,0.000067388,0.0027325072],"study_design_scores_gemma":[0.000019810685,0.0003054883,0.021875462,0.000025881605,0.000026355629,0.0024776761,0.00013007283,0.0023074418,0.9437749,0.000104562016,0.028936138,0.000016304592],"about_ca_topic_score_codex":0.0011314932,"about_ca_topic_score_gemma":0.0013075138,"teacher_disagreement_score":0.0012268282,"about_ca_system_score_codex":0.0005398801,"about_ca_system_score_gemma":0.0002420163,"threshold_uncertainty_score":0.004104197},"labels":[],"label_agreement":null},{"id":"W2127139510","doi":"10.1186/1479-5876-9-92","title":"Trauma is danger","year":2011,"lang":"en","type":"review","venue":"Journal of Translational Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Armed Forces; University of Toronto","funders":"Office of Naval Research; U.S. Navy; Bureau of Medicine and Surgery; Henry M. Jackson Foundation","keywords":"Context (archaeology); Immune system; Effector; Medicine; Innate immune system; Inflammatory response; Immunology; Intensive care medicine; Function (biology); Neuroscience; Bioinformatics; Inflammation; Biology","score_opus":0.07562408277511727,"score_gpt":0.3372134780862116,"score_spread":0.2615893953110943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127139510","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020693814,0.98650104,0.00030061323,0.004853616,0.0022055623,0.00000798257,0.000020845908,0.000016812814,0.0058865435],"genre_scores_gemma":[0.0031151667,0.98927796,0.00022827972,0.0021568295,0.0018707915,0.000010059031,0.000029851231,0.0000044611484,0.00330664],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99955493,0.00010194927,0.000050769588,0.000059732833,0.00019235416,0.00004027896],"domain_scores_gemma":[0.99949586,0.00019921486,0.00008778124,0.000022903208,0.00013971767,0.000054421816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048537483,0.0006276569,0.001010958,0.0010060746,0.0005101184,0.0018904497,0.00059107423,0.0018811928,0.007798175],"category_scores_gemma":[0.0012760643,0.00016611225,0.00031804078,0.0011922971,0.001617248,0.0020782186,0.0009777569,0.002277063,0.0048186854],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000687098,0.000032321845,0.00038018235,0.011425731,0.000059291906,0.0006183705,0.0004920967,0.00015814658,0.0015280055,0.026578544,0.13841674,0.82024187],"study_design_scores_gemma":[0.0000040926284,0.00003462499,0.000574315,0.003453022,0.000020399191,0.003186739,0.00024496534,0.000015013791,0.00021657882,0.0048466157,0.98739374,0.000009927845],"about_ca_topic_score_codex":0.0010458461,"about_ca_topic_score_gemma":0.0010160345,"teacher_disagreement_score":0.007798175,"about_ca_system_score_codex":0.00086967443,"about_ca_system_score_gemma":0.0017497129,"threshold_uncertainty_score":0.026087463},"labels":[],"label_agreement":null},{"id":"W2127163051","doi":"10.4049/jimmunol.173.11.6890","title":"Viral Activation of Macrophages through TLR-Dependent and -Independent Pathways","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Biology; Cell biology; Signal transduction; Signal transducing adaptor protein; Cytokine; Interferon; Cell culture; Toll-like receptor; Innate immune system; Immune system; Virology; Immunology","score_opus":0.011587685254115524,"score_gpt":0.2283656725718418,"score_spread":0.21677798731772627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127163051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9836541,0.0051116534,0.0067816447,0.00024535536,0.00006520655,0.00009890985,0.00034878097,0.000046893656,0.0036475013],"genre_scores_gemma":[0.98817784,0.0027035081,0.0042837784,0.00013664867,0.000035666657,0.00011090023,0.00036666336,0.000010315072,0.004174697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996606,0.000092503215,0.000034145563,0.00003531039,0.00008199365,0.00009541556],"domain_scores_gemma":[0.9998815,0.000021027,0.000027608778,0.000022641227,0.000026763453,0.000020330952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002774439,0.00032382773,0.00017737858,0.00017081934,0.00012430783,0.00035704824,0.00014871634,0.00028988515,0.0010167554],"category_scores_gemma":[0.00014686056,0.00012310428,0.00034083982,0.000092984774,0.0001373473,0.00030600408,0.0003230645,0.00046860045,0.0007805255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017041163,0.000041085732,0.00065393926,0.00008568451,0.000006779091,0.00009392205,0.000023454417,0.000041426814,0.9962735,0.00021100804,0.000031485997,0.0023672685],"study_design_scores_gemma":[0.00007689883,0.00057149463,0.012434353,0.000043818058,0.00003307797,0.0009696068,0.00013881222,0.0012563288,0.9790629,0.00038071314,0.0050216746,0.000010316746],"about_ca_topic_score_codex":0.00010376156,"about_ca_topic_score_gemma":0.00022427413,"teacher_disagreement_score":0.0010167554,"about_ca_system_score_codex":0.00020278772,"about_ca_system_score_gemma":0.00023937787,"threshold_uncertainty_score":0.0034013987},"labels":[],"label_agreement":null},{"id":"W2127978413","doi":"10.3389/fimmu.2013.00347","title":"Evolving Bacterial Envelopes and Plasticity of TLR2-Dependent Responses: Basic Research and Translational Opportunities","year":2013,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; TLR2; Pattern recognition receptor; Immune system; Innate immune system; Acquired immune system; Toll-like receptor; Cell biology; Receptor; TLR4; Computational biology; Microbiology; Genetics","score_opus":0.0935884581054131,"score_gpt":0.319706340874862,"score_spread":0.22611788276944889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2127978413","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014988878,0.9931764,0.00075062196,0.002567237,0.0006585016,0.000006732993,0.000040282506,0.000016379712,0.0012849793],"genre_scores_gemma":[0.0069353445,0.9893532,0.0007473767,0.0011754467,0.0012364377,0.0000139808235,0.000093770606,0.000005028303,0.00043934796],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999777,0.0000496999,0.000027701917,0.00005273219,0.000040577685,0.000052362357],"domain_scores_gemma":[0.9991819,0.00043027132,0.000072015864,0.000034030345,0.00017431822,0.00010740643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017652359,0.00052538223,0.0009831899,0.00086837145,0.00027762118,0.0016328348,0.0006891796,0.0016790289,0.0021792857],"category_scores_gemma":[0.0009113672,0.00028407588,0.00053187046,0.0010969536,0.0012186024,0.002766938,0.0009183987,0.0026013118,0.00080614234],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008501867,0.00026980988,0.0012444,0.031676248,0.00015185509,0.001274169,0.00080723147,0.001643799,0.042761844,0.055919003,0.029596953,0.8338044],"study_design_scores_gemma":[0.000058772515,0.0008671668,0.0037510202,0.0048640054,0.00017847786,0.002683258,0.00077613216,0.0007913094,0.010996275,0.043808017,0.9311203,0.000105181],"about_ca_topic_score_codex":0.00034801787,"about_ca_topic_score_gemma":0.00040749388,"teacher_disagreement_score":0.0021792857,"about_ca_system_score_codex":0.00081721105,"about_ca_system_score_gemma":0.0014597505,"threshold_uncertainty_score":0.0093355775},"labels":[],"label_agreement":null},{"id":"W2128075161","doi":"10.1126/scisignal.2000934","title":"TPL-2–Mediated Activation of MAPK Downstream of TLR4 Signaling Is Coupled to Arginine Availability","year":2010,"lang":"en","type":"article","venue":"Science Signaling","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Cancer Research UK","keywords":"MAPK/ERK pathway; Cell biology; Downstream (manufacturing); TLR4; Arginine; Signal transduction; Chemistry; Biology; Biochemistry; Amino acid; Business","score_opus":0.009894798736706133,"score_gpt":0.2501374144859937,"score_spread":0.24024261574928757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128075161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902202,0.0017967534,0.0055515384,0.00028371264,0.000056470344,0.000023473043,0.00027237195,0.000090341644,0.0017050892],"genre_scores_gemma":[0.99318564,0.0009395309,0.0030181364,0.000065224944,0.00003081696,0.0000444491,0.00035518373,0.00001549441,0.0023454707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982965,0.00004890074,0.000010690855,0.000030449632,0.00003331419,0.00004681224],"domain_scores_gemma":[0.9998971,0.000015921196,0.000034837132,0.000013060698,0.000016356058,0.000022726164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019054954,0.00045566566,0.00021043254,0.00017266473,0.00016109218,0.0003143951,0.00020061719,0.0002499095,0.0015236216],"category_scores_gemma":[0.00017738114,0.00012746421,0.000244804,0.000101101,0.00034875883,0.00033989068,0.00032864694,0.00051906385,0.00046461166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021612624,0.000014838287,0.00008734488,0.000030446363,0.000001796201,0.00003894669,0.000005298489,0.000036246296,0.99885035,0.00007231379,0.000026464773,0.0006198779],"study_design_scores_gemma":[0.000033132066,0.00023713776,0.003718783,0.000006390738,0.000006114454,0.00027053975,0.000022937702,0.0011577039,0.99305975,0.00018366051,0.0012981623,0.0000057041375],"about_ca_topic_score_codex":0.0001915593,"about_ca_topic_score_gemma":0.00025882982,"teacher_disagreement_score":0.0015236216,"about_ca_system_score_codex":0.0003565071,"about_ca_system_score_gemma":0.00016960115,"threshold_uncertainty_score":0.005096972},"labels":[],"label_agreement":null},{"id":"W2128814992","doi":"10.1083/jcb.201111136","title":"T granules in human platelets function in TLR9 organization and signaling","year":2012,"lang":"en","type":"article","venue":"The Journal of Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":192,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"National Heart, Lung, and Blood Institute","keywords":"TLR9; Cell biology; Biology; Toll-Like Receptor 9; Platelet; Receptor; Intracellular; Innate immune system; Compartment (ship); Inflammation; Platelet activation; Signal transduction; Immune system; Immunology; Gene; Biochemistry; Gene expression","score_opus":0.008072085934878754,"score_gpt":0.21583967732710263,"score_spread":0.20776759139222387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2128814992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99545765,0.0014629584,0.0021837018,0.000058720456,0.000008890593,0.00001451271,0.00010596802,0.000026389074,0.0006811529],"genre_scores_gemma":[0.99781954,0.0004487073,0.0011140549,0.000020496418,0.000009765457,0.000012474067,0.00013460488,0.000004032783,0.0004364125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992657,0.000017978542,0.000006913323,0.000020021695,0.000013338136,0.000015125481],"domain_scores_gemma":[0.9999502,0.000008108162,0.000020080393,0.000006617916,0.0000055404553,0.000009550306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008214595,0.0001281605,0.000093187155,0.00017831738,0.00010682439,0.0003595748,0.000072580915,0.00022248401,0.00067762646],"category_scores_gemma":[0.00012798572,0.000083225445,0.00013010897,0.0001048079,0.000119709825,0.00019357385,0.00017470885,0.00019544776,0.00023187778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030818448,0.000007939972,0.001252675,0.000023046216,0.0000038202675,0.00027178464,0.000049604576,0.000030594525,0.9959059,0.00012771729,0.000029603048,0.0019891101],"study_design_scores_gemma":[0.00005117678,0.000484968,0.04402254,0.000020609703,0.00003529193,0.0031339538,0.00023201069,0.0010978181,0.94681144,0.0003188651,0.0037818565,0.000009613321],"about_ca_topic_score_codex":0.00015370757,"about_ca_topic_score_gemma":0.0001276682,"teacher_disagreement_score":0.00067762646,"about_ca_system_score_codex":0.00012894256,"about_ca_system_score_gemma":0.00006737049,"threshold_uncertainty_score":0.0022668242},"labels":[],"label_agreement":null},{"id":"W2129040062","doi":"10.1128/iai.01068-08","title":"Nonhematopoietic Cells Control the Outcome of Infection with<i>Listeria monocytogenes</i>in a Nucleotide Oligomerization Domain 1-Dependent Manner","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vetenskapsrådet; Karolinska Institutet; University of Toronto; Deutsche Forschungsgemeinschaft","keywords":"NOD1; Biology; Listeria monocytogenes; Microbiology; Intracellular; Immunology; Immune system; Innate immune system; Cell biology; Bacteria","score_opus":0.010657364981400658,"score_gpt":0.23878694210697476,"score_spread":0.2281295771255741,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129040062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976025,0.0010306663,0.0003648613,0.000024766938,0.000007631523,0.00001400579,0.0001252531,0.000031701118,0.0007987195],"genre_scores_gemma":[0.9970822,0.0006917805,0.00041030752,0.00004494192,0.000012382729,0.000028739794,0.00020588817,0.000014202395,0.0015096429],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998481,0.000032016393,0.000014134223,0.000034575805,0.000026860287,0.000044271866],"domain_scores_gemma":[0.9997719,0.000022720196,0.00011432275,0.000021661743,0.00002050693,0.00004898655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011427767,0.00030179604,0.00021183243,0.00014933418,0.00009384035,0.00034176797,0.0001255247,0.00023168797,0.0008309143],"category_scores_gemma":[0.00012194832,0.00011011372,0.00012539871,0.0000625087,0.00021006007,0.00013105004,0.00019865944,0.00030278397,0.00042098356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018921777,0.000020985135,0.0008847445,0.000023779317,0.0000025660217,0.00005975606,0.00001875875,0.00002019761,0.99784124,0.000026624462,0.000017619257,0.000894409],"study_design_scores_gemma":[0.000055027234,0.0008120161,0.1061844,0.000025239813,0.000058484413,0.0010604543,0.00019563922,0.0009725295,0.88683325,0.000107068634,0.0036821119,0.000013795263],"about_ca_topic_score_codex":0.000204605,"about_ca_topic_score_gemma":0.0002847334,"teacher_disagreement_score":0.0008309143,"about_ca_system_score_codex":0.00014018962,"about_ca_system_score_gemma":0.00009501097,"threshold_uncertainty_score":0.0027797222},"labels":[],"label_agreement":null},{"id":"W2129454070","doi":"10.4049/jimmunol.1000872","title":"Distinct Roles of Hepatocyte- and Myeloid Cell-Derived IL-1 Receptor Antagonist during Endotoxemia and Sterile Inflammation in Mice","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Université de Genève; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Novartis Foundation; Fondation Rheumasearch; Arthritis Foundation; National Science Foundation","keywords":"Inflammation; Proinflammatory cytokine; Myeloid; Hepatocyte; Interleukin 1 receptor antagonist; Biology; Receptor antagonist; Immunology; Systemic inflammation; Receptor; In vitro; Antagonist","score_opus":0.0043222972172302365,"score_gpt":0.200180261886374,"score_spread":0.19585796466914376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129454070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878848,0.0032293915,0.0059105624,0.0003583628,0.000064227366,0.000076645505,0.0006663152,0.00028748382,0.0015223944],"genre_scores_gemma":[0.98748267,0.0015205313,0.0055561736,0.0002774803,0.000044921,0.00022828611,0.00091877434,0.00015564717,0.0038156023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923015,0.00015801922,0.000076330645,0.00018828758,0.00015012512,0.00019713654],"domain_scores_gemma":[0.99917233,0.0000660114,0.00031902327,0.00008136377,0.000044760465,0.0003166061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000496452,0.0010007251,0.0007348491,0.0010861187,0.0002882833,0.0007419356,0.00051225594,0.00078520976,0.0010271721],"category_scores_gemma":[0.00030479077,0.00062318816,0.000538258,0.00024734062,0.0010223546,0.0007170417,0.00052709214,0.0021535524,0.00062416354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008510945,0.000096624375,0.00021847172,0.000034824934,0.0000066377143,0.00011377037,0.000032544973,0.00004976145,0.99728954,0.00030182034,0.000037155474,0.0009677364],"study_design_scores_gemma":[0.0004026503,0.0022459046,0.014203527,0.00004161755,0.000108759814,0.0014066402,0.00014023532,0.0016385283,0.9759699,0.0005171301,0.0032896523,0.00003533336],"about_ca_topic_score_codex":0.00024128042,"about_ca_topic_score_gemma":0.00037412523,"teacher_disagreement_score":0.0010861187,"about_ca_system_score_codex":0.00046150314,"about_ca_system_score_gemma":0.0004677026,"threshold_uncertainty_score":0.0034362078},"labels":[],"label_agreement":null},{"id":"W2129550967","doi":"10.1128/iai.74.2.1050-1061.2006","title":"Role for Inducible Costimulator in Control of<i>Salmonella enterica</i>Serovar Typhimurium Infection in Mice","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; University of Toronto; University of Minnesota","keywords":"Salmonella enterica; Biology; CD8; Salmonella; Immune system; T cell; Cytotoxic T cell; Ovalbumin; Microbiology; Antibody; Antigen; Effector; Immunology; In vitro; Bacteria","score_opus":0.00750743270917717,"score_gpt":0.23270507499813892,"score_spread":0.22519764228896175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129550967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99251056,0.001802685,0.0028343035,0.00024942713,0.000058645688,0.00005998023,0.00038977692,0.0002691914,0.0018254275],"genre_scores_gemma":[0.99371123,0.0005953914,0.0031718628,0.00010436033,0.000029332163,0.00007565193,0.0003619551,0.00006630903,0.0018839373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975115,0.000049158596,0.000028655802,0.000054803044,0.000037476755,0.00007891849],"domain_scores_gemma":[0.9995745,0.000028321647,0.00018692129,0.000037683,0.000028318515,0.00014413868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021844567,0.0005693736,0.0002921333,0.00038520189,0.00013372378,0.00047923625,0.00035114825,0.0005282757,0.0009672799],"category_scores_gemma":[0.00014703727,0.0001866323,0.00030626496,0.00011813709,0.00041134722,0.0002799765,0.0002337038,0.0008989551,0.00032956907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035202224,0.00008049289,0.00033357748,0.000044850593,0.0000047770554,0.00007466901,0.000013123649,0.00007753065,0.9972838,0.00022611875,0.000043771248,0.0014653193],"study_design_scores_gemma":[0.00019498047,0.0017563605,0.010340656,0.00004860567,0.00006427971,0.00086045417,0.000074287316,0.002185139,0.9785404,0.00016538738,0.0057553453,0.000014193419],"about_ca_topic_score_codex":0.00027177553,"about_ca_topic_score_gemma":0.00032923147,"teacher_disagreement_score":0.0009672799,"about_ca_system_score_codex":0.0003930413,"about_ca_system_score_gemma":0.0002409636,"threshold_uncertainty_score":0.0032359362},"labels":[],"label_agreement":null},{"id":"W2129703385","doi":"10.3389/fimmu.2013.00060","title":"Modulation of Neutrophil Apoptosis and the Resolution of Inflammation through β2 Integrins","year":2013,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Cell biology; Apoptosis; Phagocytosis; Neutrophil extracellular traps; Efferocytosis; Receptor; Integrin; Immunology; FADD; Signal transduction; Biology; Programmed cell death; Macrophage; Caspase; Biochemistry","score_opus":0.006047132896017294,"score_gpt":0.19841985488948832,"score_spread":0.19237272199347102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129703385","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3145358,0.6565284,0.012408454,0.0022494374,0.00065518066,0.000080956925,0.00013590149,0.00016113432,0.013244775],"genre_scores_gemma":[0.66240865,0.32729757,0.0028357364,0.0005609022,0.00043568082,0.0000904354,0.00013620364,0.000014730743,0.006220201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998129,0.00005502965,0.00001576256,0.000020329482,0.000048174083,0.000047884372],"domain_scores_gemma":[0.9999546,0.000009445224,0.000015933474,0.0000030676993,0.000009494145,0.0000074273275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023584376,0.0003476067,0.00029437782,0.00027295342,0.00013585952,0.00046734742,0.00021669298,0.00038056326,0.0005680318],"category_scores_gemma":[0.00015750743,0.000100106474,0.00024148753,0.00019336356,0.0002234104,0.00037764618,0.0002378733,0.0004895318,0.00023531099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052660157,0.000090890535,0.0007843152,0.0015121698,0.00004161034,0.0009258884,0.00014901433,0.0006476136,0.88981396,0.007157995,0.0016763251,0.0966737],"study_design_scores_gemma":[0.00023020114,0.002529115,0.027302802,0.00040673433,0.0001405767,0.004663136,0.0003541368,0.0022394136,0.7575536,0.008479549,0.19604735,0.00005337292],"about_ca_topic_score_codex":0.00016270165,"about_ca_topic_score_gemma":0.00026128098,"teacher_disagreement_score":0.0005680318,"about_ca_system_score_codex":0.0003156845,"about_ca_system_score_gemma":0.00017444367,"threshold_uncertainty_score":0.0022904277},"labels":[],"label_agreement":null},{"id":"W2129928982","doi":"10.1053/j.gastro.2004.05.052","title":"Discussion on toll-like receptor 9 signaling mediates the anti-inflammatory effects of probiotics in murine experimental colitis","year":2004,"lang":"en","type":"letter","venue":"Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Lallemand (Canada); Western University","funders":"","keywords":"Toll-like receptor; Colitis; Receptor; Immunology; Medicine; Internal medicine; Innate immune system","score_opus":0.004928580734568925,"score_gpt":0.20647877262870418,"score_spread":0.20155019189413526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129928982","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005828503,0.011849632,0.001252518,0.89836067,0.07773189,0.00003690438,0.000099991754,0.00011825336,0.00472161],"genre_scores_gemma":[0.049920868,0.015007687,0.0014811883,0.7251488,0.19370523,0.00013480271,0.000118471624,0.000057549954,0.014425471],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99791914,0.000746898,0.00027097084,0.00018404388,0.0006313559,0.00024756082],"domain_scores_gemma":[0.995533,0.0030492267,0.0002951087,0.00017263845,0.00066080136,0.00028915005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030482553,0.0009012213,0.0017205921,0.0004653388,0.0017207338,0.0019713843,0.0015282604,0.019099606,0.0044643306],"category_scores_gemma":[0.0071133277,0.00039853284,0.0014687176,0.00041458893,0.0020339738,0.0016607224,0.0007846192,0.018658726,0.002474621],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034378227,0.00041315964,0.002162004,0.00094493845,0.00019480484,0.022022706,0.00045674955,0.0005421936,0.014661183,0.009153327,0.8582412,0.08776995],"study_design_scores_gemma":[0.0012584588,0.0012581036,0.0038631605,0.0007624321,0.0003568516,0.011622848,0.0005573954,0.0018735809,0.0144344475,0.014606769,0.9492741,0.00013182909],"about_ca_topic_score_codex":0.0007363387,"about_ca_topic_score_gemma":0.00072828674,"teacher_disagreement_score":0.019099606,"about_ca_system_score_codex":0.0025184578,"about_ca_system_score_gemma":0.000904998,"threshold_uncertainty_score":0.018272817},"labels":[],"label_agreement":null},{"id":"W2129970320","doi":"10.3346/jkms.2004.19.1.123","title":"X-linked Severe Combined Immunodeficiency Syndrome: The First Korean Case with γc Chain Gene Mutation and Subsequent Genetic Counseling","year":2004,"lang":"en","type":"article","venue":"Journal of Korean Medical Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"Korea Science and Engineering Foundation","keywords":"Mutation; Molecular biology; Gene mutation; Genetic counseling; Biology; Point mutation; Immunology; Medicine; Gene; Genetics","score_opus":0.007299079180341734,"score_gpt":0.22694108105622257,"score_spread":0.21964200187588084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129970320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876809,0.001637768,0.0015588729,0.0016157094,0.00016780086,0.00014437387,0.00025084245,0.00010566972,0.006838089],"genre_scores_gemma":[0.9952728,0.0013526551,0.0011526177,0.00054259,0.00013000029,0.000027459675,0.000120293465,0.000030185225,0.0013712741],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99955195,0.000059334372,0.000053860098,0.00011856801,0.000087714354,0.0001285221],"domain_scores_gemma":[0.99924785,0.00016953207,0.00016640435,0.00006820037,0.000062325205,0.00028565747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033982607,0.0016258894,0.0006036027,0.0016349637,0.001434613,0.00075388496,0.0008576093,0.0029584554,0.0029509345],"category_scores_gemma":[0.0020612923,0.0009177064,0.00071540114,0.0010311577,0.000877891,0.0008253267,0.001026237,0.0013053953,0.000567785],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003045698,0.0000784511,0.014578704,0.00003709141,0.000013870889,0.9797743,0.00033115345,0.00008011369,0.0017615452,0.0002643607,0.0003527276,0.0026972804],"study_design_scores_gemma":[0.000017034286,0.00006308661,0.0058930605,0.000015277827,0.000013336441,0.9921929,0.00010783593,0.000115012095,0.00046213844,0.000111650486,0.0009974996,0.000011184352],"about_ca_topic_score_codex":0.0036439416,"about_ca_topic_score_gemma":0.004405593,"teacher_disagreement_score":0.0036439416,"about_ca_system_score_codex":0.00066410925,"about_ca_system_score_gemma":0.00085193606,"threshold_uncertainty_score":0.0098718405},"labels":[],"label_agreement":null},{"id":"W2130314740","doi":"10.1096/fasebj.24.1_supplement.753.7","title":"Roll of Toll‐like Receptor 9 in Mouse Lung Inflammation in Response to Chicken Barn Air","year":2010,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"TLR9; Inflammation; Barn; Lung; TLR4; Immunology; Lipopolysaccharide; Biology; Barn-owl; Tumor necrosis factor alpha; Andrology; Respiratory system; Pathology; Molecular biology; Medicine; Internal medicine; Gene expression; Gene; Anatomy","score_opus":0.005735171825743387,"score_gpt":0.22861004799876883,"score_spread":0.22287487617302545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130314740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99136144,0.0016581718,0.0029770792,0.00039202013,0.00014133756,0.00010317918,0.0016732995,0.00013641478,0.001557187],"genre_scores_gemma":[0.9844044,0.0010601333,0.0035780251,0.00031615602,0.000032805383,0.00031603329,0.0016389745,0.00005274777,0.008600545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994854,0.000088795896,0.000070155904,0.00013887069,0.000105498235,0.00011126332],"domain_scores_gemma":[0.9996804,0.000033317476,0.00009252798,0.00004233772,0.000028299482,0.00012326415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035532936,0.0006514306,0.0004062893,0.00090771966,0.00025875185,0.00047149585,0.00032720444,0.0010683617,0.003196952],"category_scores_gemma":[0.0001440431,0.0005616441,0.00065053534,0.0002293162,0.00045433192,0.00040571648,0.00029729758,0.0020236273,0.0013276424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066615094,0.00014957067,0.00029635223,0.000055987253,0.00000822521,0.000096635405,0.00003308608,0.00004653584,0.9981294,0.000072313785,0.000050477,0.000395249],"study_design_scores_gemma":[0.0001597654,0.0026764562,0.017839214,0.000050589693,0.000049706014,0.0008907022,0.00021941823,0.0017222605,0.9740156,0.00017268944,0.0021862127,0.000017381402],"about_ca_topic_score_codex":0.0004361772,"about_ca_topic_score_gemma":0.0005915307,"teacher_disagreement_score":0.003196952,"about_ca_system_score_codex":0.0003757403,"about_ca_system_score_gemma":0.00023036172,"threshold_uncertainty_score":0.010694861},"labels":[],"label_agreement":null},{"id":"W2130333976","doi":"10.1152/ajpgi.2001.281.3.g635","title":"Persistent epithelial dysfunction and bacterial translocation after resolution of intestinal inflammation","year":2001,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Calgary","funders":"","keywords":"Inflammation; Ileitis; Colitis; Chromosomal translocation; Inflammatory bowel disease; Secretion; Immunology; Biology; Intestinal permeability; Dysbiosis; Internal medicine; Microbiology; Endocrinology; Medicine; Crohn's disease; Biochemistry; Disease; Gut flora","score_opus":0.006343018786356916,"score_gpt":0.1968759514865865,"score_spread":0.19053293270022958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130333976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792564,0.0013252819,0.00037916482,0.00005627041,0.000008294798,0.00000499859,0.000030593226,0.000014695584,0.00025508157],"genre_scores_gemma":[0.9987668,0.00048664416,0.00019084268,0.000027771535,0.00000813055,0.000004040031,0.00007766009,0.0000028622442,0.00043528623],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99979347,0.00003384559,0.000015660187,0.000029659206,0.00004238978,0.00008504959],"domain_scores_gemma":[0.99951696,0.000032425865,0.00019784337,0.000056501623,0.00003760519,0.00015867187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002595905,0.00028389718,0.00040175975,0.00019394261,0.00016888625,0.0003643802,0.00013279833,0.0005478823,0.0009813588],"category_scores_gemma":[0.00030686386,0.00015013588,0.00022159485,0.00017557338,0.0004232841,0.0004974716,0.00022401725,0.0008940554,0.00026482297],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052396907,0.000050234536,0.0044285445,0.000041652165,0.000007741911,0.00036522432,0.00003292608,0.000025423169,0.9928235,0.000034084653,0.000016120744,0.0016507076],"study_design_scores_gemma":[0.00005903901,0.007925365,0.5307437,0.000041093495,0.00006575621,0.00833451,0.0006307968,0.0005638517,0.44948086,0.00027017514,0.0018663681,0.000018466626],"about_ca_topic_score_codex":0.00016301704,"about_ca_topic_score_gemma":0.00035653327,"teacher_disagreement_score":0.0009813588,"about_ca_system_score_codex":0.00019703673,"about_ca_system_score_gemma":0.00013805162,"threshold_uncertainty_score":0.0032829642},"labels":[],"label_agreement":null},{"id":"W2130527789","doi":"10.1007/978-1-4419-6612-4_19","title":"Role of 4-1BBL and TRAF1 in the CD8 T Cell Response to Influenza Virus and HIV","year":2010,"lang":"en","type":"review","venue":"Advances in experimental medicine and biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Cytotoxic T cell; Biology; CD8; Immunology; Interleukin 21; Immune system; Natural killer T cell; T cell; Cancer research","score_opus":0.024056265911373494,"score_gpt":0.3655180028767884,"score_spread":0.3414617369654149,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130527789","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021663732,0.9978618,0.00017981784,0.00036458878,0.00048926636,0.0000039860824,0.000016143926,0.0000069002053,0.00086079846],"genre_scores_gemma":[0.0009557441,0.99660957,0.00023089822,0.00022718476,0.0005477171,0.0000068964314,0.00004146538,0.0000013561009,0.0013791996],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998801,0.000015293435,0.000017743028,0.000020876392,0.000049552193,0.00001636564],"domain_scores_gemma":[0.99982965,0.000056098565,0.000026586416,0.000005619363,0.000056419565,0.000025615473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051778817,0.00089823024,0.0011829529,0.00098156,0.00025212255,0.0008678673,0.0010650464,0.0013001603,0.002144354],"category_scores_gemma":[0.00046116847,0.0002733675,0.00025515503,0.0009959727,0.0004644087,0.0012334883,0.0005369385,0.001614507,0.0021332675],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003020281,0.00006742565,0.00016061285,0.005991745,0.00006171273,0.0002884202,0.000031360265,0.0004972602,0.0060320105,0.00318572,0.047323596,0.93605816],"study_design_scores_gemma":[0.000051437488,0.000076391414,0.00076503505,0.0008769522,0.00006153596,0.00086091325,0.00003445379,0.00012967431,0.0011086577,0.0020476917,0.99397177,0.000015433352],"about_ca_topic_score_codex":0.0011658514,"about_ca_topic_score_gemma":0.0020851216,"teacher_disagreement_score":0.002144354,"about_ca_system_score_codex":0.0008508482,"about_ca_system_score_gemma":0.0009907094,"threshold_uncertainty_score":0.007173598},"labels":[],"label_agreement":null},{"id":"W2130558223","doi":"10.1189/jlb.0506350","title":"The Fps/Fes kinase regulates the inflammatory response to endotoxin through down-regulation of TLR4, NF-κB activation, and TNF-α secretion in macrophages","year":2006,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Cancer Institute; Canadian Cancer Society","keywords":"Secretion; TLR4; Tumor necrosis factor alpha; Biology; NF-κB; Kinase; Inflammatory response; Inflammation; Cell biology; NFKB1; IκB kinase; Macrophage; Signal transduction; Immunology; Biochemistry; Gene; Transcription factor; In vitro","score_opus":0.006472245697552675,"score_gpt":0.23612322275773642,"score_spread":0.22965097706018375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130558223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981627,0.0005044805,0.00090498244,0.00004632542,0.0000066904167,0.0000053050017,0.000079211706,0.000018941711,0.00027137008],"genre_scores_gemma":[0.99793005,0.00031849567,0.0007863341,0.00001593209,0.0000049086434,0.000008473154,0.00011449487,0.000007562508,0.0008138418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999311,0.000015079604,0.0000063543444,0.000011371919,0.000016369802,0.000019808198],"domain_scores_gemma":[0.99990153,0.00001156468,0.00004347059,0.000007867676,0.000010110218,0.000025392615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012594697,0.0004578156,0.00015179907,0.00019379177,0.000116278585,0.00018413451,0.00012563475,0.00018911167,0.0006463724],"category_scores_gemma":[0.0001520858,0.00012241295,0.00015764537,0.000053869117,0.0003249497,0.00015051228,0.00011130473,0.0002491199,0.00019542205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026449334,0.000011913107,0.00020435535,0.000013224578,0.0000027122692,0.00006666419,0.0000048669576,0.000091633985,0.99866223,0.000061320876,0.000014184627,0.0006023177],"study_design_scores_gemma":[0.0000683021,0.0003235022,0.011364263,0.000008422035,0.00002111051,0.00074786716,0.000045678004,0.0018379064,0.9840224,0.00017859509,0.0013747985,0.0000070998194],"about_ca_topic_score_codex":0.00035040468,"about_ca_topic_score_gemma":0.00033741427,"teacher_disagreement_score":0.0006463724,"about_ca_system_score_codex":0.0002624134,"about_ca_system_score_gemma":0.00013166995,"threshold_uncertainty_score":0.0021623373},"labels":[],"label_agreement":null},{"id":"W2130827011","doi":"10.1172/jci16510","title":"Endothelium-derived Toll-like receptor-4 is the key molecule in LPS-induced neutrophil sequestration into lungs","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":406,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"TLR4; Bone marrow; Intravital microscopy; Endothelium; Immunology; Lipopolysaccharide; Inflammation; Pulmonary sequestration; Microcirculation; Biology; Medicine; Pathology; Lung; Internal medicine; Endocrinology","score_opus":0.04664398978921872,"score_gpt":0.32455398685784503,"score_spread":0.2779099970686263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2130827011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97519284,0.01148872,0.010239761,0.0005677504,0.000084723135,0.000086837565,0.00034575397,0.00019078638,0.0018026817],"genre_scores_gemma":[0.98773915,0.0027644264,0.004739619,0.00014112107,0.000048189813,0.00010997671,0.00039095257,0.000018828941,0.004047747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996822,0.0001082323,0.000029637102,0.000049378097,0.000069398004,0.00006121864],"domain_scores_gemma":[0.9997882,0.000023155791,0.00010128638,0.000018654955,0.000024902194,0.000043797383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029705733,0.00047404697,0.00033576376,0.00023911236,0.00016447048,0.0002965754,0.00029702872,0.0005633069,0.0015502652],"category_scores_gemma":[0.00020789717,0.00024583243,0.0003284214,0.000093995106,0.0002672539,0.00040133315,0.0005205366,0.00073790835,0.0005966975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003852176,0.000029226921,0.0005510804,0.000076317294,0.00000625274,0.00020948713,0.000009797488,0.000065339605,0.9966144,0.00012422193,0.00005143612,0.0018771698],"study_design_scores_gemma":[0.00006684327,0.0010238534,0.023382427,0.00003178983,0.000063456595,0.0014756445,0.00007744805,0.0019575427,0.9672675,0.00025763165,0.004381505,0.0000143489],"about_ca_topic_score_codex":0.00020069201,"about_ca_topic_score_gemma":0.00016595663,"teacher_disagreement_score":0.0015502652,"about_ca_system_score_codex":0.00027881298,"about_ca_system_score_gemma":0.00023361626,"threshold_uncertainty_score":0.0051861405},"labels":[],"label_agreement":null},{"id":"W2131129064","doi":"10.1128/iai.00709-10","title":"Exposure to Cigarette Smoke Inhibits the Pulmonary T-Cell Response to Influenza Virus and<i>Mycobacterium tuberculosis</i>","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Kentucky","keywords":"Mycobacterium tuberculosis; Tuberculosis; Immunology; Virus; Biology; Influenza A virus; Virology; Interferon gamma; Tuberculosis vaccines; Orthomyxoviridae; Immune system; Microbiology; Medicine; Pathology","score_opus":0.009648064135921734,"score_gpt":0.23836229280460708,"score_spread":0.22871422866868535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131129064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997889,0.00095994864,0.00038323607,0.00005040361,0.000018871313,0.000008801765,0.000036270274,0.000017654884,0.0006357553],"genre_scores_gemma":[0.99705243,0.000947458,0.00039841697,0.00006268989,0.000018467039,0.000014583198,0.00016578841,0.00000753468,0.0013326182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988306,0.000026878959,0.00000779934,0.000014203361,0.00002816681,0.000040013227],"domain_scores_gemma":[0.9999143,0.000020788239,0.000017151418,0.000011517104,0.000008087159,0.000028144008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013982273,0.00027245007,0.00022632752,0.00015059626,0.000092998875,0.00018272134,0.00012845376,0.00021852399,0.0006505524],"category_scores_gemma":[0.00012570365,0.00010804709,0.00025430258,0.000071924296,0.00018525543,0.00007888865,0.00012509644,0.0003147859,0.00021026608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026464454,0.00010820339,0.0010108746,0.000027493717,0.00001034873,0.00003371085,0.000010529739,0.000025240024,0.9958996,0.000033162396,0.000030991185,0.0025452885],"study_design_scores_gemma":[0.000028437733,0.0036571666,0.040958732,0.000016390375,0.00004603638,0.00035216403,0.0000326648,0.00043325944,0.952777,0.000058083882,0.0016352646,0.000004838235],"about_ca_topic_score_codex":0.00035701506,"about_ca_topic_score_gemma":0.00087828503,"teacher_disagreement_score":0.0006505524,"about_ca_system_score_codex":0.00009149243,"about_ca_system_score_gemma":0.00012971107,"threshold_uncertainty_score":0.0021763444},"labels":[],"label_agreement":null},{"id":"W2131243283","doi":"10.1093/intimm/dxp030","title":"Sequences derived from self-RNA containing certain natural modifications act as suppressors of RNA-mediated inflammatory immune responses","year":2009,"lang":"en","type":"article","venue":"International Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"U.S. Public Health Service; Pfizer","keywords":"RNA; RNA silencing; Immune system; Gene silencing; Biology; Small interfering RNA; Cell biology; Nucleic acid; Sense (electronics); Innate immune system; Methylation; RNA interference; Chemistry; Gene; Immunology; Genetics","score_opus":0.011149751535203091,"score_gpt":0.26089746823606524,"score_spread":0.24974771670086215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131243283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98102176,0.007606728,0.006947183,0.0001036519,0.000111153495,0.00004029784,0.00009510001,0.00011715319,0.0039570252],"genre_scores_gemma":[0.99247557,0.0018225566,0.003548916,0.00010224782,0.00004446725,0.000030368194,0.00014158427,0.000020298881,0.0018139299],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999013,0.000025217405,0.000008995935,0.000023118711,0.000022714948,0.000018676255],"domain_scores_gemma":[0.99984455,0.000037680024,0.00005908614,0.00001641176,0.000016799255,0.00002535734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001732966,0.00029703666,0.00021589179,0.00016517786,0.000111353256,0.00024305296,0.00015206911,0.00029604317,0.0014011473],"category_scores_gemma":[0.00025339375,0.000113261805,0.00020968987,0.0000840377,0.00023674064,0.00016265994,0.00016917638,0.00032628703,0.0005864568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009336388,0.000015704332,0.00025965695,0.00006267192,0.000005399034,0.000058959835,0.000009872977,0.00005710617,0.9961708,0.00014689895,0.000020638821,0.0030990727],"study_design_scores_gemma":[0.000015597272,0.000511618,0.0037418853,0.000012330798,0.0000227256,0.00040259148,0.000018417113,0.00037991078,0.9918548,0.00017402277,0.0028612758,0.000004894741],"about_ca_topic_score_codex":0.000046680187,"about_ca_topic_score_gemma":0.00010806399,"teacher_disagreement_score":0.0014011473,"about_ca_system_score_codex":0.00007586554,"about_ca_system_score_gemma":0.000112557456,"threshold_uncertainty_score":0.0046873093},"labels":[],"label_agreement":null},{"id":"W2131343547","doi":"10.1177/1753425907087588","title":"Structure of a novel lipid A obtained from the lipopolysaccharide of <i>Caulobacter crescentus</i>","year":2008,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health","keywords":"Caulobacter crescentus; Biochemistry; Chemistry; Fatty acid; Protein subunit; Lipid A; Lipopolysaccharide; Tetrasaccharide; Secretion; Molecular mass; Stereochemistry; Biology; Enzyme; Cell; Polysaccharide; Gene","score_opus":0.015778684914961323,"score_gpt":0.2248220362744317,"score_spread":0.2090433513594704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131343547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99398017,0.0009900421,0.0028622637,0.0001224955,0.000041822925,0.00003867077,0.0006879696,0.000045600947,0.0012310531],"genre_scores_gemma":[0.98767227,0.00067470677,0.0060457895,0.00016772964,0.00001514364,0.000031091047,0.0026726583,0.00003684619,0.0026837343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995625,0.0000062599256,0.0000031404081,0.000013912431,0.000008564803,0.000011875401],"domain_scores_gemma":[0.99985707,0.000013992454,0.00004197542,0.000010302404,0.00003336496,0.000043334512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059031634,0.0005915223,0.00012382126,0.00033696502,0.0002586956,0.00024707004,0.0002777652,0.0002906102,0.0007816964],"category_scores_gemma":[0.00014572703,0.00013023967,0.00035267088,0.0002967205,0.00023351515,0.00023532085,0.00022789094,0.0005347362,0.00030215012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015737895,0.000015279338,0.00025094222,0.000035579058,0.00000819321,0.00019860348,0.000016547314,0.000100739526,0.9982651,0.00008340369,0.00003131895,0.0008369533],"study_design_scores_gemma":[0.000060388174,0.00057409075,0.01690751,0.000047504935,0.00006557782,0.0007209379,0.00012849497,0.0016021843,0.97359735,0.00031116267,0.0059485496,0.000036388476],"about_ca_topic_score_codex":0.0021760364,"about_ca_topic_score_gemma":0.0010387127,"teacher_disagreement_score":0.0021760364,"about_ca_system_score_codex":0.00034609865,"about_ca_system_score_gemma":0.0005038859,"threshold_uncertainty_score":0.004326761},"labels":[],"label_agreement":null},{"id":"W2131416851","doi":"10.4049/jimmunol.1303083","title":"Intestinal Expression of Fas and Fas Ligand Is Upregulated by Bacterial Signaling through TLR4 and TLR5, with Activation of Fas Modulating Intestinal TLR-Mediated Inflammation","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Fas ligand; TLR5; TLR4; Intestinal epithelium; TLR2; Biology; Cell biology; Apoptosis; Toll-like receptor; Inflammation; Signal transduction; Receptor; Fas receptor; Immunology; Epithelium; Immune system; Innate immune system; Programmed cell death; Biochemistry","score_opus":0.007537679788040544,"score_gpt":0.20905767485352134,"score_spread":0.2015199950654808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131416851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9790277,0.011737199,0.005845862,0.0002104144,0.00006728591,0.000041879135,0.00027815683,0.00010180663,0.0026896375],"genre_scores_gemma":[0.9898224,0.0032782457,0.003189305,0.00009352217,0.000024426374,0.00003235944,0.00034493636,0.00000829595,0.0032065026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960285,0.00007836026,0.000058115336,0.00005321725,0.000121392666,0.000085987005],"domain_scores_gemma":[0.9997594,0.000015868407,0.00011880521,0.000016509755,0.00004535447,0.000044057015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024001731,0.00037251975,0.00026919696,0.00054506725,0.00015205622,0.0004396109,0.00013726077,0.00035811914,0.0027782933],"category_scores_gemma":[0.00022861018,0.0001797013,0.00042000547,0.00024075189,0.00022083426,0.00036579117,0.0003739036,0.00046803177,0.00053846784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034840414,0.000023336104,0.0026784348,0.00019940917,0.000024585579,0.00020312586,0.000039512113,0.00006691331,0.9893167,0.00016226886,0.000056230492,0.006881198],"study_design_scores_gemma":[0.00008531121,0.0016798807,0.05744149,0.00008945792,0.00015376182,0.002714887,0.00035640158,0.0014351223,0.922086,0.00050364755,0.013425633,0.000028422686],"about_ca_topic_score_codex":0.00025977968,"about_ca_topic_score_gemma":0.00026615997,"teacher_disagreement_score":0.0027782933,"about_ca_system_score_codex":0.00032424106,"about_ca_system_score_gemma":0.00017918115,"threshold_uncertainty_score":0.009294331},"labels":[],"label_agreement":null},{"id":"W2131559384","doi":"10.1016/j.clim.2009.03.024","title":"OR.17. Ninjurin-1 is a Novel Adhesion Molecule of the Blood-brain Barrier Involved in the Recruitment of Monocytes to the Central Nervous System","year":2009,"lang":"en","type":"article","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; Université de Montréal; Hôpital Notre-Dame","funders":"","keywords":"Blood–brain barrier; Central nervous system; Cell adhesion molecule; Adhesion; Neuroscience; Immunology; Medicine; Chemistry; Biology","score_opus":0.06436250368371683,"score_gpt":0.3315670810607327,"score_spread":0.26720457737701586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131559384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9668127,0.0137421,0.0021321198,0.0006424352,0.0003110441,0.00004853767,0.00037740445,0.000058744026,0.015874922],"genre_scores_gemma":[0.9786427,0.0049506677,0.0014888379,0.00021210851,0.00010574627,0.000028579538,0.00062666193,0.000008674092,0.013936163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999443,0.000007030787,0.0000031660154,0.0000084543735,0.000015941898,0.000021043728],"domain_scores_gemma":[0.99997115,0.000002721759,0.000010456877,0.0000018351998,0.0000045643174,0.000009328468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009579088,0.00021282404,0.00015993862,0.00016775061,0.00029035678,0.00035450666,0.00026613005,0.00023420302,0.002648579],"category_scores_gemma":[0.000087399094,0.00007846946,0.00013613794,0.0001027288,0.0002003238,0.00021630262,0.00018609104,0.00033571862,0.00073874777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010549212,0.00008746633,0.003017233,0.00020692097,0.000018050903,0.0019221934,0.000043839627,0.00011911665,0.9609671,0.0024500496,0.00072637864,0.029386615],"study_design_scores_gemma":[0.00013700334,0.0010816493,0.107434146,0.000083020284,0.0001401576,0.009411721,0.0002149847,0.0030630336,0.8150233,0.0017822551,0.06160712,0.000021509695],"about_ca_topic_score_codex":0.00071521,"about_ca_topic_score_gemma":0.00086393824,"teacher_disagreement_score":0.002648579,"about_ca_system_score_codex":0.0003818088,"about_ca_system_score_gemma":0.00025526743,"threshold_uncertainty_score":0.008860409},"labels":[],"label_agreement":null},{"id":"W2131966979","doi":"10.1111/j.1600-065x.2011.01047.x","title":"Peptidoglycan: a critical activator of the mammalian immune system during infection and homeostasis","year":2011,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":134,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Peptidoglycan; Biology; Immune system; NOD1; Microbiology; Cell biology; Innate immune system; Cell wall; NOD2; Immunology; Genetics","score_opus":0.053186184661224496,"score_gpt":0.3072133030080091,"score_spread":0.2540271183467846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131966979","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036214394,0.99747247,0.0002476455,0.000294178,0.000250688,0.0000043977143,0.0000123521395,0.000014364497,0.0013417485],"genre_scores_gemma":[0.0018378394,0.99605596,0.000283487,0.00017021543,0.00027195757,0.0000077318045,0.000028508288,0.000001997921,0.0013423108],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998765,0.000019183182,0.000014882627,0.000020588483,0.000051518426,0.000017360204],"domain_scores_gemma":[0.99989605,0.000018933935,0.000022003267,0.0000030403062,0.00003146288,0.000028450648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032711803,0.0007514284,0.0008214042,0.0007293782,0.00022990532,0.00091512577,0.0005572105,0.0009389593,0.0016979261],"category_scores_gemma":[0.00026596567,0.00015765829,0.00013839746,0.0009624807,0.0004550365,0.00090305816,0.000587274,0.0010385677,0.0028692384],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012091631,0.000040287778,0.0002024608,0.0062163724,0.000030196836,0.00029211742,0.00006933574,0.0002777501,0.019527992,0.0048774397,0.025535382,0.9428098],"study_design_scores_gemma":[0.000016930127,0.00009440129,0.0013878506,0.0012549562,0.00003319414,0.0015377467,0.00008621902,0.00006339937,0.0025270458,0.0024757849,0.99050677,0.000015685606],"about_ca_topic_score_codex":0.0004462369,"about_ca_topic_score_gemma":0.00050776504,"teacher_disagreement_score":0.0016979261,"about_ca_system_score_codex":0.0005053077,"about_ca_system_score_gemma":0.00085386867,"threshold_uncertainty_score":0.005680144},"labels":[],"label_agreement":null},{"id":"W2132009816","doi":"10.1186/s12876-014-0206-x","title":"Toll-like receptor 4 Asp299Gly and Thr399Ile polymorphisms: New data and a meta-analysis","year":2014,"lang":"en","type":"review","venue":"BMC Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute","funders":"","keywords":"Medicine; Immunology; Ulcerative colitis; NOD2; Inflammatory bowel disease; Pathogenesis; Single-nucleotide polymorphism; Crohn's disease; Hepatology; Population; Disease; Immune system; TLR4; Gastroenterology; Internal medicine; Genotype; Genetics; Gene; Biology","score_opus":0.10179352197307648,"score_gpt":0.32168882318578323,"score_spread":0.21989530121270676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132009816","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19188812,0.7993163,0.003223715,0.00073188206,0.0005392655,0.0001237173,0.00325394,0.00008903165,0.00083411403],"genre_scores_gemma":[0.89389783,0.10024225,0.0021175253,0.0005812641,0.0004796726,0.00019353227,0.0020067107,0.00005059252,0.0004307395],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9945457,0.00257588,0.0008997039,0.0011486944,0.0005431917,0.00028674406],"domain_scores_gemma":[0.9890911,0.007544558,0.0015386391,0.00095207203,0.0006222524,0.000251488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007676652,0.0018552647,0.00811902,0.0027151043,0.0005617231,0.0021464324,0.0016213044,0.0013803901,0.0029046282],"category_scores_gemma":[0.010649676,0.0008043146,0.02138193,0.0053880573,0.0004292367,0.0009461148,0.00084512105,0.0015080093,0.00024488568],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016391685,0.000094802104,0.1696956,0.022316035,0.7689723,0.0008233789,0.000078762074,0.0022109384,0.0013935918,0.0001832933,0.0015301569,0.016309537],"study_design_scores_gemma":[0.001383494,0.0005145146,0.08234151,0.0017234641,0.9092874,0.00050279155,0.00007313592,0.0016970056,0.0003454339,0.00035893553,0.0017328005,0.000039520073],"about_ca_topic_score_codex":0.0032986074,"about_ca_topic_score_gemma":0.0040253755,"teacher_disagreement_score":0.00811902,"about_ca_system_score_codex":0.00075722835,"about_ca_system_score_gemma":0.0008633573,"threshold_uncertainty_score":0.040598452},"labels":[],"label_agreement":null},{"id":"W2132015115","doi":"10.1080/01902140802130105","title":"ALVEOLAR EPITHELIUM DOWN-MODULATES ENDOTOXIN—BUT NOT TUMOR NECROSIS FACTOR ALPHA—INDUCED ACTIVATION OF ENDOTHELIUM AND SELECTIVELY INHIBITS NEUTROPHIL TRANSENDOTHELIAL MIGRATION","year":2008,"lang":"en","type":"article","venue":"Experimental Lung Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Respiratory epithelium; Endothelium; Alveolar Epithelium; Tumor necrosis factor alpha; Interleukin 8; Cell biology; Epithelium; Chemokine; Lipopolysaccharide; TLR4; Proinflammatory cytokine; Biology; A549 cell; Immunology; Chemistry; Inflammation; Signal transduction; Endocrinology; Cell; Biochemistry","score_opus":0.04131780013714314,"score_gpt":0.31090926661196217,"score_spread":0.269591466474819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132015115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951532,0.0019443231,0.0018025978,0.00007792028,0.00004938133,0.000028958448,0.00007465716,0.000036917532,0.0008321387],"genre_scores_gemma":[0.9946374,0.0013882006,0.0017577348,0.000060504506,0.000014854229,0.00003161893,0.00020836237,0.0000142334975,0.0018870021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999689,0.00007914987,0.00003368084,0.00004189143,0.0000731944,0.00008304975],"domain_scores_gemma":[0.9998504,0.000022990565,0.00004018856,0.00002202084,0.000024315761,0.000040043295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018681193,0.000347632,0.00045488033,0.00014038583,0.00014526157,0.00041568791,0.0002191207,0.00028784527,0.000984891],"category_scores_gemma":[0.00016105286,0.00020256487,0.0002764184,0.000114113245,0.0002306901,0.00028771083,0.00033558503,0.0006570607,0.00038354893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015191817,0.000038853286,0.00005448381,0.000022372014,0.0000030178321,0.000024905736,0.0000074172385,0.000012506324,0.99918026,0.00002143637,0.000009923138,0.00047294662],"study_design_scores_gemma":[0.000023676526,0.0008422215,0.0027033628,0.0000065148647,0.000025792113,0.0001403234,0.00004208401,0.0005235143,0.9939458,0.000019633324,0.0017237875,0.0000033169958],"about_ca_topic_score_codex":0.0003890462,"about_ca_topic_score_gemma":0.0004438186,"teacher_disagreement_score":0.000984891,"about_ca_system_score_codex":0.00015376197,"about_ca_system_score_gemma":0.00022558942,"threshold_uncertainty_score":0.003294766},"labels":[],"label_agreement":null},{"id":"W2132027014","doi":"10.1073/pnas.0710445105","title":"Differential function of the NACHT-LRR (NLR) members Nod1 and Nod2 in arthritis","year":2008,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Dutch Arthritis Association","keywords":"NOD1; Proinflammatory cytokine; NOD2; Inflammation; Immunology; Rheumatoid arthritis; Arthritis; Pathogenesis; Medicine; Biology; Innate immune system; Immune system","score_opus":0.02163860983304921,"score_gpt":0.24400302085627745,"score_spread":0.22236441102322824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132027014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98399943,0.013677414,0.0013645305,0.00013293145,0.000018277162,0.000009193314,0.000040104613,0.000018629684,0.00073931075],"genre_scores_gemma":[0.9954016,0.0029793943,0.0008143595,0.00006226836,0.000023215787,0.000012844081,0.00005159767,0.000003487135,0.00065110996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996567,0.00012461552,0.000037431884,0.00005736571,0.000057633086,0.00006620919],"domain_scores_gemma":[0.99985874,0.000032365664,0.000034829183,0.00001456459,0.000013274167,0.00004623125],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045971305,0.00037035096,0.0003453307,0.00024049584,0.00014464567,0.00045347417,0.00018640768,0.00048521336,0.00075829384],"category_scores_gemma":[0.00029674455,0.00012908169,0.00015847459,0.00010814852,0.00035318278,0.00034858647,0.0002627401,0.00032002755,0.00021377948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006973894,0.000043991182,0.0028393378,0.00014443327,0.000014297926,0.0005089381,0.000051422125,0.00012190894,0.991544,0.00017107067,0.000026214004,0.0038369629],"study_design_scores_gemma":[0.0002606437,0.00487205,0.12836269,0.00012505428,0.000228963,0.014840405,0.00071322377,0.0037788756,0.83994806,0.0014123563,0.0054080384,0.000049638234],"about_ca_topic_score_codex":0.00010200498,"about_ca_topic_score_gemma":0.0001525033,"teacher_disagreement_score":0.00075829384,"about_ca_system_score_codex":0.00015000695,"about_ca_system_score_gemma":0.00012480798,"threshold_uncertainty_score":0.002536714},"labels":[],"label_agreement":null},{"id":"W2132427034","doi":"10.1111/j.1744-313x.2011.01077.x","title":"Evaluation of Toll‐like receptor and adaptor molecule polymorphisms for susceptibility to tuberculosis in a Colombian population","year":2012,"lang":"en","type":"article","venue":"International Journal of Immunogenetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute; Université du Québec à Chicoutimi","funders":"Universidad de Antioquia; Harvard University","keywords":"Toll; Tuberculosis; Toll-like receptor; Receptor; Population; Biology; Immunology; Signal transducing adaptor protein; Genetics; Medicine; Environmental health; Innate immune system; Pathology","score_opus":0.022891578099828783,"score_gpt":0.3031891700190005,"score_spread":0.2802975919191717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132427034","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988451,0.00020047676,0.00011458871,0.00003571883,0.0000038040064,0.000024396133,0.00019319601,0.000004610105,0.00057805073],"genre_scores_gemma":[0.99945265,0.00007517868,0.00010536639,0.000014558591,0.0000033696572,0.000011142974,0.00012975288,0.0000019399795,0.00020606711],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994357,0.0001737505,0.000046688863,0.00017331095,0.000077216544,0.000093235314],"domain_scores_gemma":[0.9994117,0.00013472362,0.00015126093,0.000056166096,0.00008942235,0.00015660307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045563155,0.00058267644,0.00042540577,0.0012835537,0.000751893,0.0006097595,0.00039917105,0.00046637416,0.003755569],"category_scores_gemma":[0.0015918344,0.00036629106,0.0002701552,0.0007953171,0.00043257725,0.0002066716,0.00045557728,0.00033717838,0.00029106575],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005303526,0.00013320702,0.99091,0.000036576286,0.000062399,0.0006803283,0.0005712721,0.000049747352,0.0037914175,0.00005435893,0.00011353926,0.0030668906],"study_design_scores_gemma":[0.000017348015,0.00015548474,0.99847335,0.000006693322,0.000030504145,0.0004828621,0.00038978763,0.00011287079,0.00008667616,0.0000142046565,0.0002239621,0.00000614461],"about_ca_topic_score_codex":0.042543992,"about_ca_topic_score_gemma":0.031139823,"teacher_disagreement_score":0.042543992,"about_ca_system_score_codex":0.0007120286,"about_ca_system_score_gemma":0.00032198094,"threshold_uncertainty_score":0.08459276},"labels":[],"label_agreement":null},{"id":"W2132545831","doi":"10.1164/rccm.201001-0088oc","title":"Phosphoinositide-3 Kinase γ Activity Contributes to Sepsis and Organ Damage by Altering Neutrophil Recruitment","year":2010,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Federal Aviation Administration; Pfizer","keywords":"Sepsis; Medicine; PI3K/AKT/mTOR pathway; Immunology; Septic shock; Phosphoinositide 3-kinase; Chemokine; Pathogenesis; Inflammation; Systemic inflammation; Intensive care; Organ dysfunction; Signal transduction; Biology; Cell biology; Intensive care medicine","score_opus":0.014764311652825369,"score_gpt":0.3009525846501722,"score_spread":0.28618827299734684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2132545831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849006,0.007923408,0.0044363462,0.0005068218,0.00009059147,0.00007290275,0.00055374904,0.00012645757,0.0013890547],"genre_scores_gemma":[0.99270827,0.004515506,0.0014183461,0.00013890563,0.000016904634,0.00005577421,0.00025960346,0.000012095032,0.00087469816],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99988544,0.000019878295,0.000012665404,0.000027237367,0.000025224703,0.000029526687],"domain_scores_gemma":[0.9998982,0.000008239111,0.000045832483,0.000009867001,0.000007951862,0.000029813358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018494586,0.0006584574,0.00026246067,0.00025620323,0.00015966877,0.00038776267,0.00029996588,0.0003749191,0.0015887076],"category_scores_gemma":[0.00016242852,0.00015175046,0.00029541334,0.0002085965,0.0005833477,0.00026554277,0.0002640472,0.0010130194,0.00029090958],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001421816,0.000119651166,0.0011694808,0.00024135233,0.00002750455,0.00013233774,0.000018941622,0.00025810092,0.99175876,0.0003380152,0.00015074908,0.004363278],"study_design_scores_gemma":[0.0003089087,0.0021959909,0.026012203,0.00009596351,0.00017838599,0.0013492173,0.000108490836,0.0021869955,0.9617278,0.0007505905,0.0050640567,0.000021500156],"about_ca_topic_score_codex":0.00033304724,"about_ca_topic_score_gemma":0.00038395813,"teacher_disagreement_score":0.0015887076,"about_ca_system_score_codex":0.00039844168,"about_ca_system_score_gemma":0.00044436302,"threshold_uncertainty_score":0.0053147674},"labels":[],"label_agreement":null},{"id":"W2133206699","doi":"10.1186/1479-5876-8-6","title":"Robust TLR4-induced gene expression patterns are not an accurate indicator of human immunity","year":2010,"lang":"en","type":"article","venue":"Journal of Translational Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; Queen's University; University of British Columbia","funders":"Canadian Institutes of Health Research; Genome Prairie; Genome British Columbia; Michael Smith Health Research BC; University of British Columbia; Wellcome Trust","keywords":"Immunity; TLR4; Gene expression; Gene; Computational biology; Expression (computer science); Biology; Bioinformatics; Immunology; Medicine; Genetics; Computer science; Immune system","score_opus":0.051073552480003434,"score_gpt":0.3026444989607288,"score_spread":0.25157094648072537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133206699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9708863,0.0057867705,0.014480274,0.0004829207,0.00013425203,0.00006019516,0.0040425146,0.000225845,0.003900907],"genre_scores_gemma":[0.9918737,0.0011849958,0.004189592,0.00025733962,0.000054758228,0.00008910246,0.0014371799,0.000028932574,0.0008844166],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99894494,0.00022815124,0.00010291401,0.00030022854,0.00028331665,0.00014050334],"domain_scores_gemma":[0.9989599,0.00035167474,0.00032375526,0.00015921747,0.00012683868,0.000078538265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006969722,0.0002975318,0.0003778223,0.0004743336,0.00013468921,0.00047686894,0.00025513797,0.00053412386,0.0032015564],"category_scores_gemma":[0.001201188,0.000143554,0.00016415665,0.00044532496,0.0005482814,0.00025579636,0.00023780164,0.00052596396,0.0010867821],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011845692,0.00008540455,0.10562822,0.0005316929,0.00010438627,0.00034769802,0.00015408047,0.00036365102,0.87016463,0.00045472963,0.0012271233,0.019753844],"study_design_scores_gemma":[0.000046198416,0.0018852019,0.51328915,0.00017589163,0.00019601922,0.007388061,0.0006214122,0.0018618753,0.4522148,0.0018727676,0.020404613,0.000043882592],"about_ca_topic_score_codex":0.00017073288,"about_ca_topic_score_gemma":0.00012760115,"teacher_disagreement_score":0.0032015564,"about_ca_system_score_codex":0.00019323382,"about_ca_system_score_gemma":0.00016120682,"threshold_uncertainty_score":0.010710239},"labels":[],"label_agreement":null},{"id":"W2133265454","doi":"10.1016/j.vaccine.2012.10.016","title":"Immune response to vaccine adjuvants during the first year of life","year":2012,"lang":"en","type":"review","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Immune system; Vaccination; Immunization; Immunology; Innate immune system; Adjuvant; Vaccine adjuvant; Biology; Population; Immunity; Medicine","score_opus":0.01865986747453652,"score_gpt":0.2660286467280311,"score_spread":0.2473687792534946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133265454","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014972789,0.9990689,0.00010294976,0.00014681481,0.00015741093,0.0000033128604,0.0000118718,0.0000035086048,0.0003555713],"genre_scores_gemma":[0.0009821957,0.9978521,0.00015183563,0.000175886,0.00028858855,0.000008222423,0.000029269637,0.0000011178138,0.0005108758],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998242,0.00003556347,0.000026243122,0.00003290674,0.000057896727,0.000023225099],"domain_scores_gemma":[0.9996295,0.00017369902,0.00007552783,0.000009578954,0.00008395474,0.000027668313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066117925,0.0009335254,0.0016746161,0.0010369206,0.00015258724,0.0008347112,0.00058805867,0.0012578394,0.0015100159],"category_scores_gemma":[0.0008903828,0.00024503563,0.00034692916,0.00083365914,0.00037109028,0.0007398472,0.00047539594,0.0014997693,0.0012097372],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019143267,0.000078083365,0.00031782044,0.009214586,0.00006074636,0.00014785353,0.000026930184,0.00026497644,0.0029022868,0.0012709363,0.015860349,0.9696639],"study_design_scores_gemma":[0.00006964776,0.00035538364,0.0032273685,0.006048587,0.00025202398,0.0024013757,0.000089249974,0.00019242526,0.0021315415,0.001803053,0.98339635,0.000033074495],"about_ca_topic_score_codex":0.0009609574,"about_ca_topic_score_gemma":0.0013388412,"teacher_disagreement_score":0.0016746161,"about_ca_system_score_codex":0.00051047927,"about_ca_system_score_gemma":0.00088839175,"threshold_uncertainty_score":0.0050515532},"labels":[],"label_agreement":null},{"id":"W2133309260","doi":"10.4049/jimmunol.0901800","title":"Cysteinyl-Leukotriene Receptor Type 1 Expression and Function Is Down-Regulated during Monocyte-Derived Dendritic Cell Maturation with Zymosan: Involvement of IL-10 and Prostaglandins","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Zymosan; Cell biology; TLR2; Chemistry; Chemotaxis; Leukotriene B4; Cyclooxygenase; Receptor; Biology; Signal transduction; Immunology; Inflammation; TLR4; Biochemistry; Enzyme","score_opus":0.006565545063767675,"score_gpt":0.1956888365029941,"score_spread":0.18912329143922643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133309260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949752,0.002782065,0.0011943812,0.000100379,0.000034833265,0.000034268676,0.00032738733,0.0000349611,0.0005165374],"genre_scores_gemma":[0.99473417,0.0018258326,0.001116553,0.00009750476,0.000022322009,0.000069440306,0.0004999769,0.000011801018,0.0016224917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999788,0.000028233517,0.000028450668,0.000036939906,0.000039471557,0.00007895859],"domain_scores_gemma":[0.9998765,0.000015339243,0.000032240758,0.00001544131,0.000021330867,0.000039143768],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016555772,0.0002699953,0.0004526622,0.0001724745,0.00012568603,0.00041871564,0.00012941482,0.0002989444,0.00084859366],"category_scores_gemma":[0.00017706715,0.00015612565,0.00031962263,0.00019918065,0.00020181303,0.00019213918,0.00017336602,0.00053442735,0.00038973984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032781932,0.000019849682,0.00038022138,0.000036714526,0.0000034066754,0.00009683115,0.000025582714,0.000013233438,0.99823016,0.000030007963,0.000020195388,0.00081590953],"study_design_scores_gemma":[0.000034800494,0.00029113682,0.026230661,0.000009928474,0.000029490215,0.0004418987,0.000083947576,0.0003822639,0.9703522,0.000043156004,0.0020940434,0.000006478289],"about_ca_topic_score_codex":0.0005291442,"about_ca_topic_score_gemma":0.00051916577,"teacher_disagreement_score":0.00084859366,"about_ca_system_score_codex":0.0003259323,"about_ca_system_score_gemma":0.00031279557,"threshold_uncertainty_score":0.00283885},"labels":[],"label_agreement":null},{"id":"W2133412753","doi":"10.1242/bio.2012554","title":"Phenotyping of Nod1/2 double deficient mice and characterization of Nod1/2 in systemic inflammation and associated renal disease","year":2012,"lang":"en","type":"article","venue":"Biology Open","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Nierstichting","keywords":"NOD1; NOD2; Inflammation; Biology; Immunology; Septic shock; Vascular permeability; Kidney; Endocrinology; Internal medicine; Immune system; Sepsis; Medicine; Innate immune system","score_opus":0.01756128739869596,"score_gpt":0.25366209175759014,"score_spread":0.2361008043588942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2133412753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98650116,0.0014942694,0.008362395,0.0001496669,0.00004754293,0.00021880677,0.0017318776,0.00013893953,0.001355363],"genre_scores_gemma":[0.9682515,0.0022763025,0.018107604,0.0002775231,0.00005509705,0.00061796675,0.0034667866,0.0002816543,0.006665486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99951386,0.00007254003,0.00006982969,0.00017188845,0.0000861817,0.000085688014],"domain_scores_gemma":[0.99942565,0.00005107867,0.00018227703,0.000053224867,0.00003908353,0.00024873504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039758286,0.00078947993,0.00058855716,0.0018033948,0.00035544013,0.0004527263,0.00033951033,0.00062018406,0.0020532452],"category_scores_gemma":[0.00026917743,0.00038451047,0.00042990665,0.00041535022,0.00040326218,0.0004571867,0.00039660544,0.0009952631,0.0006418038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004399358,0.0001128848,0.001169453,0.00004806736,0.000006538404,0.00028925587,0.0000326794,0.000044171895,0.99700445,0.00007343678,0.000029927902,0.0007491729],"study_design_scores_gemma":[0.0002033218,0.002397114,0.084900275,0.00009573242,0.00013937928,0.008933155,0.00032114304,0.0017947545,0.893561,0.00031746202,0.007287588,0.000049071354],"about_ca_topic_score_codex":0.0002113956,"about_ca_topic_score_gemma":0.00050085026,"teacher_disagreement_score":0.0020532452,"about_ca_system_score_codex":0.00020687291,"about_ca_system_score_gemma":0.00013909614,"threshold_uncertainty_score":0.00686872},"labels":[],"label_agreement":null},{"id":"W2134596993","doi":"10.1152/ajplung.00173.2001","title":"Distribution of intranasal instillations in mice: effects of volume, time, body position, and anesthesia","year":2002,"lang":"en","type":"article","venue":"American Journal of Physiology-Lung Cellular and Molecular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":345,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; St. Joseph's Hospital","funders":"","keywords":"Nasal administration; Distribution (mathematics); Respiratory tract; Gastrointestinal tract; Volume of distribution; Anesthesia; Chemistry; Respiratory system; Medicine; Nuclear medicine; Pharmacokinetics; Pharmacology; Internal medicine","score_opus":0.0015001983751183352,"score_gpt":0.18193110641025767,"score_spread":0.18043090803513934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134596993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796551,0.00479917,0.011397696,0.0001560824,0.0001272931,0.00013120362,0.0008562799,0.0005717684,0.002305488],"genre_scores_gemma":[0.9695935,0.0045135366,0.015949337,0.00024176194,0.00009003786,0.0003441645,0.0016088984,0.0003615469,0.0072971545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99951184,0.00006099203,0.000025196865,0.00014999196,0.00014499255,0.000107016895],"domain_scores_gemma":[0.9995678,0.00008427581,0.00015240916,0.000044876764,0.000059655496,0.00009095466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050975644,0.00088656944,0.0006603436,0.0006391868,0.00017978305,0.0006208893,0.0003867071,0.0006093149,0.0010964929],"category_scores_gemma":[0.00027819432,0.0003293291,0.00050095026,0.00031859614,0.0005566547,0.0005297044,0.00023599043,0.0013602983,0.00045049808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002822043,0.000061075676,0.0002194044,0.000036576606,0.000008904711,0.000022661885,0.000031694108,0.00008428058,0.99739516,0.000039760333,0.00004016189,0.0017781445],"study_design_scores_gemma":[0.000024895837,0.0019039449,0.004927374,0.000010326346,0.00004589857,0.00010633468,0.000032193526,0.0013620766,0.99081576,0.00003075331,0.0007273031,0.000013055705],"about_ca_topic_score_codex":0.0011312579,"about_ca_topic_score_gemma":0.0017246283,"teacher_disagreement_score":0.0011312579,"about_ca_system_score_codex":0.0005948693,"about_ca_system_score_gemma":0.0005098218,"threshold_uncertainty_score":0.0043160915},"labels":[],"label_agreement":null},{"id":"W2134969728","doi":"10.1093/jac/46.1.19","title":"Apoptosis, oxidative metabolism and interleukin-8 production in human neutrophils exposed to azithromycin: effects of Streptococcus pneumoniae","year":2000,"lang":"en","type":"article","venue":"Journal of Antimicrobial Chemotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Streptococcus pneumoniae; Azithromycin; Apoptosis; Microbiology; Biology; Tumor necrosis factor alpha; Immunology; Interleukin; Cytokine; Antibiotics; Biochemistry","score_opus":0.005419391290292546,"score_gpt":0.23295994279644391,"score_spread":0.22754055150615138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2134969728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953635,0.0038352318,0.0003541478,0.000047533722,0.000015348807,0.000014785248,0.00006160514,0.000004286055,0.00030364437],"genre_scores_gemma":[0.9975731,0.0010912379,0.0005139102,0.00003872655,0.000017432067,0.00002865042,0.00014871449,0.0000013858183,0.00058685546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975866,0.00009595932,0.000028653285,0.000031048374,0.000055344226,0.000030408584],"domain_scores_gemma":[0.99989045,0.000030150002,0.000026551112,0.000011945972,0.000023099972,0.000017713151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022112545,0.00019343584,0.0002924075,0.000103292936,0.00008152454,0.00018792675,0.000097379234,0.00031502068,0.0009203838],"category_scores_gemma":[0.0002556676,0.00008144861,0.00014638354,0.00008958558,0.00016271096,0.00015026507,0.00014428972,0.0002768454,0.00017795424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018887285,0.00008317744,0.0033294416,0.00018424037,0.000020636748,0.0002806042,0.00007997226,0.000052886327,0.98879343,0.000021690928,0.0000535517,0.005211705],"study_design_scores_gemma":[0.00013963008,0.0046948777,0.13150367,0.000045896624,0.00009661467,0.0017962529,0.00021047873,0.0011864302,0.8581083,0.00008479523,0.0021201812,0.000012979511],"about_ca_topic_score_codex":0.00037935146,"about_ca_topic_score_gemma":0.0004523551,"teacher_disagreement_score":0.0009203838,"about_ca_system_score_codex":0.00013977075,"about_ca_system_score_gemma":0.00011717471,"threshold_uncertainty_score":0.0030789971},"labels":[],"label_agreement":null},{"id":"W2135021119","doi":"10.1016/j.jamcollsurg.2005.06.070","title":"Hemorrhagic shock recruits Toll-like receptor 4 to the plasma membrane in macrophages: A novel mechanism of cell priming for LPS signaling","year":2005,"lang":"en","type":"article","venue":"Journal of the American College of Surgeons","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Medicine; Priming (agriculture); Cell biology; Mechanism (biology); Receptor; Toll-like receptor; Shock (circulatory); Toll; Hemorrhagic shock; Immunology; Innate immune system; Internal medicine","score_opus":0.014968831086315864,"score_gpt":0.23636184176181294,"score_spread":0.22139301067549708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135021119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9406218,0.017033327,0.016434439,0.0076062214,0.0011076252,0.00013778302,0.0010708385,0.00038804955,0.015599916],"genre_scores_gemma":[0.97137964,0.007833392,0.004907693,0.00070433767,0.00061805936,0.00015379667,0.0010553696,0.000036508285,0.013311301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998047,0.000048854905,0.000017099972,0.000023732087,0.000050532315,0.000055191704],"domain_scores_gemma":[0.9998448,0.00002500601,0.00003420104,0.000017126249,0.000039032187,0.000039930077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003750919,0.00031677287,0.00028444256,0.0004915274,0.00041865135,0.0006878154,0.00035877083,0.0005269018,0.007626307],"category_scores_gemma":[0.00042856453,0.00024243268,0.00035809388,0.00019428243,0.0002692606,0.0007635298,0.0006419264,0.00062003185,0.0018793306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003952363,0.00020538986,0.0066222143,0.00051249546,0.000030422421,0.00325273,0.00021023126,0.0005856265,0.9102881,0.0073293718,0.009460254,0.057550795],"study_design_scores_gemma":[0.00086295424,0.0027538543,0.10656954,0.0002201594,0.00014445308,0.009788727,0.00096006185,0.007548138,0.7861985,0.01588055,0.0689532,0.00011995412],"about_ca_topic_score_codex":0.0001951796,"about_ca_topic_score_gemma":0.0002064642,"teacher_disagreement_score":0.007626307,"about_ca_system_score_codex":0.0004629984,"about_ca_system_score_gemma":0.000405985,"threshold_uncertainty_score":0.025512516},"labels":[],"label_agreement":null},{"id":"W2135452775","doi":"10.4049/jimmunol.175.10.6702","title":"The MHC of the Duck (<i>Anas platyrhynchos</i>) Contains Five Differentially Expressed Class I Genes","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Genetics; Gene; MHC class I; Locus (genetics); Major histocompatibility complex; Anas; Allele; MHC class II","score_opus":0.007097855730792605,"score_gpt":0.21415285452346247,"score_spread":0.20705499879266986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135452775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9956424,0.00048693625,0.0011551563,0.000030361953,0.00001140772,0.000009960672,0.0005403262,0.000039502214,0.0020839355],"genre_scores_gemma":[0.9921726,0.00039687727,0.0027027873,0.00005065994,0.000011481659,0.000017669709,0.0013312387,0.000016731257,0.003299932],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99993646,0.000003196578,0.000005987882,0.000029626042,0.000015384425,0.000009400715],"domain_scores_gemma":[0.99989927,0.000010452338,0.00003950186,0.0000071078566,0.000012753503,0.000031008647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000033879118,0.00023322945,0.00013376753,0.00031095598,0.00025879257,0.00030447362,0.000098369834,0.0001405124,0.001304916],"category_scores_gemma":[0.000073001705,0.00010686035,0.00017121903,0.00017314432,0.00021377235,0.00018227813,0.00021373732,0.00021822208,0.00054645695],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071664996,0.000008923562,0.0072054737,0.00004664389,0.0000074829413,0.00014743472,0.00008298433,0.00003509307,0.9842904,0.000095410964,0.00005869976,0.0079497425],"study_design_scores_gemma":[0.000023643554,0.0006822477,0.79688185,0.00005788333,0.000093151226,0.0044534747,0.0004607823,0.0010814783,0.18150498,0.00021698892,0.014513173,0.0000302946],"about_ca_topic_score_codex":0.0023416304,"about_ca_topic_score_gemma":0.003419794,"teacher_disagreement_score":0.0023416304,"about_ca_system_score_codex":0.0003142414,"about_ca_system_score_gemma":0.00015130342,"threshold_uncertainty_score":0.004656017},"labels":[],"label_agreement":null},{"id":"W2135637410","doi":"10.1097/shk.0b013e31825a1982","title":"Apocynin Attenuates Lipopolysaccharide-Induced Lung Injury in an Isolated and Perfused Rat Lung Model","year":2012,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Apocynin; Bronchoalveolar lavage; Myeloperoxidase; Medicine; Lipopolysaccharide; Tumor necrosis factor alpha; Lung; Pharmacology; Immunology; NADPH oxidase; Endocrinology; Internal medicine; Inflammation; Oxidative stress","score_opus":0.014453902948391755,"score_gpt":0.270501253382975,"score_spread":0.2560473504345832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135637410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873843,0.006400236,0.0038129454,0.00045539378,0.00018961942,0.00015482397,0.0001952641,0.0002449586,0.0011624441],"genre_scores_gemma":[0.9886474,0.004318796,0.0033998562,0.00027130233,0.00009069032,0.00020739312,0.00036374255,0.000020358078,0.002680425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987555,0.000023516777,0.000013086623,0.000020317924,0.000033614633,0.0000338806],"domain_scores_gemma":[0.99980825,0.000011100315,0.000073677504,0.000012908916,0.000027688679,0.00006639882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027093393,0.0006750173,0.0006965459,0.0004276296,0.00015090907,0.00022158958,0.0003133436,0.00045772264,0.0010338323],"category_scores_gemma":[0.00017181679,0.0002028819,0.00038632168,0.00016449195,0.0003507961,0.00038377166,0.00023974356,0.0012490911,0.00017443753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040528616,0.0018826994,0.00048020005,0.0003453769,0.000044287848,0.0002670652,0.000041421164,0.00024496112,0.9823583,0.00014376892,0.00028880846,0.009850374],"study_design_scores_gemma":[0.0010024845,0.032962803,0.013292564,0.000088602384,0.00016677476,0.000925668,0.00013608541,0.003993112,0.9428718,0.00029396662,0.00423569,0.000030443452],"about_ca_topic_score_codex":0.00038313982,"about_ca_topic_score_gemma":0.0005599041,"teacher_disagreement_score":0.0010338323,"about_ca_system_score_codex":0.00020345607,"about_ca_system_score_gemma":0.000436045,"threshold_uncertainty_score":0.0034585595},"labels":[],"label_agreement":null},{"id":"W2136174903","doi":"10.1016/j.ajpath.2012.05.011","title":"Kinetics of Proinflammatory Monocytes in a Model of Multiple Sclerosis and Its Perturbation by Laquinimod","year":2012,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates; Teva Pharmaceutical Industries","keywords":"Proinflammatory cytokine; Multiple sclerosis; Kinetics; Monocyte; Medicine; Neuroscience; Immunology; Inflammation; Physics; Biology; Classical mechanics","score_opus":0.021139632631365594,"score_gpt":0.22796897379187425,"score_spread":0.20682934116050866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136174903","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968677,0.0005118001,0.001465146,0.00011911569,0.000049969618,0.000015256203,0.00025138588,0.000055678567,0.0006639651],"genre_scores_gemma":[0.99769515,0.00023712919,0.00082062633,0.000038510592,0.00001903072,0.000033530963,0.00013468851,0.000009061304,0.001012243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986136,0.000029272856,0.000009386159,0.000022221964,0.000022995007,0.000054671633],"domain_scores_gemma":[0.99968934,0.00008450014,0.00005351874,0.000030327386,0.000040909403,0.00010143489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021766829,0.00021924108,0.00035039132,0.00025816957,0.00023626575,0.00033329372,0.0002077242,0.00042004755,0.001005162],"category_scores_gemma":[0.00020949941,0.00014675265,0.00021125599,0.00015772536,0.00026289697,0.00022217579,0.0001041149,0.0008731439,0.00032214797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006943421,0.00022063493,0.0009162187,0.000034915643,0.000008844878,0.00017489133,0.00008831556,0.00048322513,0.98895836,0.00024414051,0.000118044445,0.001808989],"study_design_scores_gemma":[0.00017734864,0.0027817737,0.010744626,0.000007280431,0.000048675294,0.00032503795,0.00015342362,0.009560784,0.97460085,0.0004904649,0.0010735212,0.000036198602],"about_ca_topic_score_codex":0.0011501516,"about_ca_topic_score_gemma":0.0008717435,"teacher_disagreement_score":0.0011501516,"about_ca_system_score_codex":0.00029482835,"about_ca_system_score_gemma":0.0002541106,"threshold_uncertainty_score":0.0033626556},"labels":[],"label_agreement":null},{"id":"W2136253179","doi":"10.4049/jimmunol.176.11.6982","title":"STAT1 Regulates IFN-αβ- and IFN-γ-Dependent Control of Infection with <i>Chlamydia pneumoniae</i> by Nonhemopoietic Cells","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Vetenskapsrådet; Karolinska Institutet; York University","keywords":"STAT1; Biology; Chlamydophila pneumoniae; Interferon; Microbiology; Intracellular parasite; CD8; Chlamydia; Indoleamine 2,3-dioxygenase; Immunity; Streptococcus pneumoniae; Virology; Immunology; Chlamydiaceae; Immune system","score_opus":0.001944852576030677,"score_gpt":0.17011302590688887,"score_spread":0.1681681733308582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136253179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99110365,0.0020803513,0.0015701993,0.00019012598,0.00006395006,0.000024911858,0.001179049,0.00023461577,0.0035532422],"genre_scores_gemma":[0.9947462,0.00081938296,0.00064695906,0.0001069847,0.00001650593,0.000020441474,0.0012325848,0.00003095107,0.0023800305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984026,0.000021182597,0.000012130685,0.000026282793,0.000034305907,0.000065712775],"domain_scores_gemma":[0.9998796,0.000010418516,0.000051350828,0.000011520219,0.000011245822,0.000035850535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011327487,0.0003401129,0.00015555948,0.00020068264,0.00019730933,0.00045924025,0.0001935792,0.00020521754,0.0019678187],"category_scores_gemma":[0.00008193558,0.00016588782,0.00025874496,0.000107992804,0.0002505147,0.00013565304,0.00020814392,0.0005808419,0.0010176213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020959774,0.000025055402,0.0005909803,0.00003341464,0.0000032618639,0.00004350031,0.000016457658,0.000095322546,0.99759907,0.00014357288,0.00015830685,0.0010815313],"study_design_scores_gemma":[0.000055778786,0.00029188808,0.041159708,0.000031732485,0.000029441442,0.00050773507,0.00011396584,0.003349213,0.948547,0.00018292821,0.005718803,0.000011867214],"about_ca_topic_score_codex":0.0006076449,"about_ca_topic_score_gemma":0.00086377,"teacher_disagreement_score":0.0019678187,"about_ca_system_score_codex":0.00035588976,"about_ca_system_score_gemma":0.000266772,"threshold_uncertainty_score":0.006583035},"labels":[],"label_agreement":null},{"id":"W2136369336","doi":"10.2174/156720109787048221","title":"Enhancement of Immunoprotective Effect of CpG-ODN by Formulation with Polyphosphazenes Against E. coli Septicemia in Neonatal Chickens","year":2009,"lang":"en","type":"article","venue":"Current Drug Delivery","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"College of Pharmacy and Nutrition, University of Saskatchewan; University of Saskatchewan","keywords":"CpG Oligodeoxynucleotide; Biology; CpG site; Saline; Microbiology; Emulsion; Liposome; Biochemistry","score_opus":0.0037576478188627764,"score_gpt":0.22268753605630023,"score_spread":0.21892988823743745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136369336","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998444,0.00056027714,0.0006835193,0.000018801362,0.000009837554,0.000018035473,0.00004117646,0.000009367064,0.00021498314],"genre_scores_gemma":[0.9958722,0.00067409076,0.0025416214,0.000034954057,0.0000066974203,0.00002902628,0.00012220963,0.0000063066323,0.0007130159],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999409,0.000010525597,0.000006186062,0.000012917733,0.000017435492,0.0000120506],"domain_scores_gemma":[0.9999169,0.000014207013,0.000029700572,0.000004350666,0.000013543815,0.000021262429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000109976776,0.00028193297,0.00015902072,0.00009847994,0.000043041622,0.000113520764,0.0001258507,0.00018109664,0.00033040336],"category_scores_gemma":[0.00015272872,0.000089409514,0.000112908754,0.00003591979,0.00013908593,0.0001345671,0.00011310327,0.00023072529,0.000080606784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012478285,0.000023803688,0.0001438708,0.000040831404,0.000002553394,0.000012934585,0.0000065286267,0.00006502997,0.99852103,0.000008004764,0.0000049655528,0.0010457858],"study_design_scores_gemma":[0.00002735742,0.0030716786,0.004504278,0.000010931709,0.00001988502,0.00007987477,0.000021302263,0.00046085153,0.9911271,0.000009469668,0.00066375086,0.0000035099008],"about_ca_topic_score_codex":0.0006261035,"about_ca_topic_score_gemma":0.001098953,"teacher_disagreement_score":0.0006261035,"about_ca_system_score_codex":0.00013365482,"about_ca_system_score_gemma":0.00013362194,"threshold_uncertainty_score":0.0012449026},"labels":[],"label_agreement":null},{"id":"W2136437831","doi":"10.1084/jem.20031237","title":"Toll-like Receptors Induce a Phagocytic Gene Program through p38","year":2003,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":433,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Institute of Allergy and Infectious Diseases; National Center for Research Resources; National Institute of General Medical Sciences; National Cancer Institute; National Institutes of Health; Canadian Institutes of Health Research; Leukemia and Lymphoma Society; Stop Cancer; U.S. Public Health Service; U.S. Department of Defense","keywords":"Phagocytosis; Biology; Cell biology; Innate immune system; Receptor; TLR2; Microbiology; TLR9; Toll-like receptor; Signal transduction; Macrophage; Scavenger receptor; Immune system; TLR4; Immunology; Gene; Gene expression; Biochemistry","score_opus":0.02474793688489882,"score_gpt":0.3093915593644403,"score_spread":0.28464362247954145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136437831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98878586,0.0023882585,0.0046320963,0.00024966977,0.000033817305,0.00005597097,0.00026700372,0.00011860721,0.003468638],"genre_scores_gemma":[0.9931384,0.0007765925,0.0030482318,0.00004811497,0.000016746138,0.000039472445,0.00019602179,0.000008115723,0.0027282743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985874,0.000030113471,0.000009582182,0.000021670628,0.000033989025,0.00004593464],"domain_scores_gemma":[0.99988663,0.000024556935,0.00003069023,0.000018379635,0.000015390628,0.000024415913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016317458,0.00024276716,0.00012458504,0.00020704202,0.00012955125,0.00018491605,0.00007276581,0.00013947573,0.0022434134],"category_scores_gemma":[0.00017515119,0.000109823355,0.00021266278,0.00008075143,0.00019399254,0.00014472748,0.00029637953,0.000341732,0.00059090694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024773946,0.00004667644,0.0005267541,0.000059442154,0.0000035300407,0.00012659388,0.000029923161,0.000037452817,0.993411,0.00020694254,0.00010127374,0.0052025625],"study_design_scores_gemma":[0.00006533452,0.0009234497,0.01539972,0.000014057029,0.000011782108,0.0014520217,0.0000799293,0.00082697364,0.97505194,0.0004094664,0.005760725,0.0000045891547],"about_ca_topic_score_codex":0.00009589095,"about_ca_topic_score_gemma":0.00013235498,"teacher_disagreement_score":0.0022434134,"about_ca_system_score_codex":0.00014174926,"about_ca_system_score_gemma":0.00013662288,"threshold_uncertainty_score":0.00750494},"labels":[],"label_agreement":null},{"id":"W2136807721","doi":"10.1093/intimm/dxh295","title":"Ets-1 deficiency leads to altered B cell differentiation, hyperresponsiveness to TLR9 and autoimmune disease","year":2005,"lang":"en","type":"article","venue":"International Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":118,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"International Myeloma Foundation","keywords":"TLR9; CD40; Adoptive cell transfer; Biology; B cell; Cellular differentiation; Cell biology; Molecular biology; Immunology; Immune system; T cell; Antibody; Cytotoxic T cell; DNA methylation; Gene expression; In vitro; Gene; Genetics","score_opus":0.007789708861918784,"score_gpt":0.24367801645834622,"score_spread":0.23588830759642743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2136807721","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970477,0.0007977768,0.000872659,0.000059311667,0.000018151524,0.000011248847,0.00039113665,0.00007540989,0.00072661444],"genre_scores_gemma":[0.9955959,0.0006508108,0.0008805184,0.000042286065,0.000010988394,0.0000213741,0.0005473604,0.000032212585,0.002218613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974734,0.00005372359,0.000030411982,0.00006340578,0.00006020028,0.000044939137],"domain_scores_gemma":[0.99964964,0.00005765082,0.0001348084,0.00002389559,0.000012576634,0.000121409816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000137665,0.0007598339,0.0002714746,0.00078665145,0.00015443066,0.0002773381,0.0002519565,0.00060283625,0.0019389727],"category_scores_gemma":[0.0001695727,0.0002831924,0.00022790224,0.00025938838,0.00038667355,0.00017507623,0.0003416774,0.0006772329,0.0004668207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024801292,0.000040105468,0.0003288471,0.000019546871,0.000006852324,0.00022302022,0.000009211133,0.00005657439,0.99849904,0.00007117252,0.000021080996,0.00047643526],"study_design_scores_gemma":[0.00013396992,0.0008904373,0.036097102,0.00002882558,0.00008765625,0.004634796,0.00008565265,0.0013546107,0.95328546,0.0003025827,0.00308033,0.000018592567],"about_ca_topic_score_codex":0.00032281913,"about_ca_topic_score_gemma":0.00045397933,"teacher_disagreement_score":0.0019389727,"about_ca_system_score_codex":0.00020903112,"about_ca_system_score_gemma":0.000144534,"threshold_uncertainty_score":0.0064864755},"labels":[],"label_agreement":null},{"id":"W2137781960","doi":"10.4049/jimmunol.179.7.4711","title":"Differential Role of TLR- and RLR-Signaling in the Immune Responses to Influenza A Virus Infection and Vaccination","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":306,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Biology; Virus; Immune system; Hemagglutinin (influenza); Virology; Influenza A virus; Interferon; Signal transduction; TLR7; Vaccination; Innate immune system; Immunology; Acquired immune system; Cell biology; Toll-like receptor","score_opus":0.010012898606361526,"score_gpt":0.2616510702710975,"score_spread":0.251638171664736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137781960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964007,0.0011266846,0.0011108981,0.000057478308,0.000014722383,0.000019345398,0.00008377149,0.00003191187,0.0011544122],"genre_scores_gemma":[0.9978248,0.0003592869,0.00087022426,0.000050410996,0.000009893152,0.000031003514,0.00015733385,0.0000074181835,0.00068969274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995716,0.000102259466,0.000044802273,0.00006575598,0.00006128547,0.00015435771],"domain_scores_gemma":[0.99977237,0.00005212565,0.000048012706,0.00003444224,0.000017536986,0.00007548771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036647968,0.0004337731,0.0003701145,0.00027345898,0.00012330012,0.00035708534,0.00024123557,0.0005276926,0.00079347007],"category_scores_gemma":[0.0002717548,0.0002188426,0.00031013764,0.000058682574,0.0002975667,0.00038936568,0.00036038196,0.00081262825,0.000409288],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033903754,0.00004790842,0.00064452976,0.00003213087,0.0000039178326,0.0000512272,0.000015252243,0.000055001496,0.9965501,0.0001847687,0.00001486502,0.0020612339],"study_design_scores_gemma":[0.000056714016,0.001080175,0.020699661,0.000021967953,0.000031593692,0.0008578025,0.00006851019,0.0015888208,0.9743134,0.0002447277,0.0010288128,0.000007912907],"about_ca_topic_score_codex":0.00008019446,"about_ca_topic_score_gemma":0.00009135051,"teacher_disagreement_score":0.00079347007,"about_ca_system_score_codex":0.00023493054,"about_ca_system_score_gemma":0.0001920734,"threshold_uncertainty_score":0.0026543736},"labels":[],"label_agreement":null},{"id":"W2137904098","doi":"10.4049/jimmunol.167.11.6601","title":"Involvement of Phosphoinositide 3-Kinases in Neutrophil Activation and the Development of Acute Lung Injury","year":2001,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":194,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada); University of Toronto; Ontario Institute for Cancer Research","funders":"National Heart, Lung, and Blood Institute","keywords":"Proinflammatory cytokine; Kinase; Protein kinase B; Phosphoinositide 3-kinase; PI3K/AKT/mTOR pathway; Tumor necrosis factor alpha; Immunology; Phosphorylation; Pulmonary edema; Signal transduction; Lung; Inflammation; Medicine; Biology; Chemistry; Cell biology; Internal medicine","score_opus":0.008466832390217787,"score_gpt":0.23551181294525075,"score_spread":0.22704498055503297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2137904098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96780574,0.024494683,0.0047989073,0.00048327877,0.000052575786,0.00004969167,0.00023122672,0.00009831719,0.0019856708],"genre_scores_gemma":[0.9896383,0.007669783,0.0015216134,0.00009352726,0.00001952994,0.00003719636,0.00013244337,0.000005424841,0.0008820481],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991953,0.000013161923,0.000008857234,0.000014538192,0.00002288721,0.000021001226],"domain_scores_gemma":[0.9999447,0.000004811585,0.00002638668,0.000003847128,0.0000045336387,0.000015757694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012309678,0.0003959096,0.00014864275,0.0001591163,0.00017361795,0.00026531122,0.00014410066,0.00033881824,0.0005784558],"category_scores_gemma":[0.000098716875,0.000106217885,0.00018514859,0.00012651306,0.00027167785,0.000267505,0.00022669706,0.00042408606,0.0001917051],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001334838,0.00013914438,0.0045584594,0.00026219676,0.000029251736,0.00068269664,0.000054555654,0.0002282872,0.97577626,0.000797783,0.00020313813,0.015933484],"study_design_scores_gemma":[0.00023233639,0.0016210595,0.17479502,0.000097045726,0.00017567686,0.005603891,0.00024269636,0.0051179715,0.7944072,0.0028909286,0.01478295,0.000033246914],"about_ca_topic_score_codex":0.0005589435,"about_ca_topic_score_gemma":0.00061769085,"teacher_disagreement_score":0.0005784558,"about_ca_system_score_codex":0.000328299,"about_ca_system_score_gemma":0.00033543824,"threshold_uncertainty_score":0.00238204},"labels":[],"label_agreement":null},{"id":"W2138035164","doi":"10.1128/iai.01662-06","title":"Surface Expression of Toll-Like Receptor 9 Is Upregulated on Intestinal Epithelial Cells in Response to Pathogenic Bacterial DNA","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Alberta","funders":"Fondation pour la Recherche Médicale; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Biology; Salmonella enterica; Microbiology; Secretion; TLR9; Toll-Like Receptor 9; Molecular biology; Gene expression; Salmonella; Gene; Bacteria; DNA methylation","score_opus":0.010604075586078012,"score_gpt":0.24512586484603768,"score_spread":0.23452178925995967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138035164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99564385,0.0012896855,0.0013944872,0.00010209678,0.00002953115,0.000017250139,0.000540468,0.000046894995,0.0009356119],"genre_scores_gemma":[0.9945827,0.0009166181,0.001661382,0.00009097274,0.000016461028,0.000038750528,0.00079926406,0.0000140499515,0.0018796603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997577,0.000036996425,0.000021833244,0.000052935637,0.000061164676,0.00006936461],"domain_scores_gemma":[0.9998203,0.000022289818,0.000052377105,0.000019634148,0.000029960695,0.000055628258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000096486336,0.00025871856,0.00033180488,0.00031613657,0.00015098506,0.00031299188,0.000115478484,0.00038193056,0.0016254499],"category_scores_gemma":[0.00013840855,0.0001971948,0.00039058452,0.00018318588,0.0002133124,0.0002342709,0.00020904886,0.00060035096,0.0005814584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088817986,0.000006000537,0.0002314351,0.000017446237,0.0000016193795,0.000054467288,0.000007422086,0.000005599103,0.99939084,0.000004994304,0.0000068854515,0.00018436542],"study_design_scores_gemma":[0.00002499916,0.0006960326,0.08226563,0.000020138585,0.000034112265,0.0008605748,0.00024847078,0.00058004097,0.9136077,0.000056778917,0.0015914699,0.0000139839],"about_ca_topic_score_codex":0.00022303581,"about_ca_topic_score_gemma":0.00022750189,"teacher_disagreement_score":0.0016254499,"about_ca_system_score_codex":0.00019434246,"about_ca_system_score_gemma":0.00009015436,"threshold_uncertainty_score":0.005437672},"labels":[],"label_agreement":null},{"id":"W2138102959","doi":"10.1074/jbc.m201366200","title":"Involvement of Toll-like Receptor (TLR) 2 and TLR4 in Cell Activation by Mannuronic Acid Polymers","year":2002,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"Norges Forskningsråd; Kreftforeningen","keywords":"Toll; TLR4; Toll-like receptor; Receptor; Chemistry; Cell biology; Innate immune system; Immunology; Biochemistry; Biology","score_opus":0.012932933498988004,"score_gpt":0.20667052808774666,"score_spread":0.19373759458875867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138102959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98822635,0.0038876978,0.0056574135,0.0001655583,0.00003644882,0.000034143515,0.00015360519,0.000053245763,0.001785529],"genre_scores_gemma":[0.98971975,0.001866684,0.00456108,0.00006747229,0.00002674184,0.00009369171,0.00031106087,0.00000946815,0.0033440634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996518,0.000120213575,0.00003162152,0.00003114897,0.000054952503,0.00011035132],"domain_scores_gemma":[0.99984264,0.000034874556,0.00004798779,0.00002230418,0.000021604126,0.000030558476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003540291,0.0006878292,0.00028925046,0.00035098207,0.00024543382,0.00045192713,0.0002604838,0.0007347433,0.0014966519],"category_scores_gemma":[0.00030470363,0.00030254218,0.00045419685,0.00013763586,0.00032303648,0.00043174243,0.00037959474,0.00042791016,0.0005274098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005636904,0.00003857505,0.00048986136,0.00008910482,0.000008582372,0.00020490386,0.000015516469,0.00013960763,0.9961849,0.00023642501,0.000031750857,0.0019971414],"study_design_scores_gemma":[0.00007961561,0.00052137434,0.006184059,0.000011672759,0.000046627443,0.0007716587,0.00006146142,0.0017765018,0.98810726,0.00035923556,0.0020680842,0.000012335876],"about_ca_topic_score_codex":0.00023637188,"about_ca_topic_score_gemma":0.00021449635,"teacher_disagreement_score":0.0014966519,"about_ca_system_score_codex":0.00033331724,"about_ca_system_score_gemma":0.00026791645,"threshold_uncertainty_score":0.00500679},"labels":[],"label_agreement":null},{"id":"W2138129058","doi":"10.1093/toxsci/kfu068","title":"Aryl Hydrocarbon Receptor (AhR) Attenuation of Subchronic Cigarette Smoke-induced Pulmonary Neutrophilia Is Associated with Retention of Nuclear RelB and Suppression of Intercellular Adhesion Molecule-1 (ICAM-1)","year":2014,"lang":"en","type":"article","venue":"Toxicological Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada); McGill University Health Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Aryl hydrocarbon receptor; RELB; Neutrophilia; Inflammation; Chemistry; Intercellular Adhesion Molecule-1; Immunology; Lung; Medicine; Pharmacology; Internal medicine; NFKB1; Biochemistry","score_opus":0.02373739927003143,"score_gpt":0.23447130194861962,"score_spread":0.2107339026785882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138129058","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953056,0.0016632604,0.0016065836,0.00010247934,0.000048622544,0.000051380233,0.00035081405,0.000094434414,0.0007767708],"genre_scores_gemma":[0.992092,0.0012350215,0.0017511921,0.0000835743,0.000020550826,0.00010269419,0.00053709006,0.000020986256,0.0041568326],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99968565,0.00004789403,0.000027962598,0.00005869096,0.00008736691,0.000092456576],"domain_scores_gemma":[0.99983764,0.00001355411,0.00004845436,0.000021310294,0.000016431317,0.000062506384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020086621,0.0004583524,0.0003683594,0.00029555729,0.00013320555,0.00020594416,0.00023402425,0.00036829422,0.0016600941],"category_scores_gemma":[0.00007364406,0.00016363937,0.00041612145,0.0001611163,0.00040140603,0.00018248001,0.00026087026,0.0010637438,0.00036678233],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109785346,0.00006057455,0.00007053796,0.00001914516,0.0000024428334,0.000020769274,0.000006413779,0.0000107825335,0.9993079,0.000022315437,0.000013404881,0.00035595498],"study_design_scores_gemma":[0.000039455375,0.0019392505,0.010275289,0.00000800796,0.000014566963,0.0001878131,0.00003649854,0.00024980478,0.98640674,0.000033965818,0.00080367894,0.0000049212495],"about_ca_topic_score_codex":0.00060859224,"about_ca_topic_score_gemma":0.001351245,"teacher_disagreement_score":0.0016600941,"about_ca_system_score_codex":0.00020283798,"about_ca_system_score_gemma":0.00022186377,"threshold_uncertainty_score":0.005553603},"labels":[],"label_agreement":null},{"id":"W2138167941","doi":"10.1097/ccm.0b013e3181b07b78","title":"Phase 2 trial of eritoran tetrasodium (E5564), a Toll-like receptor 4 antagonist, in patients with severe sepsis*","year":2009,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":226,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Eisai","keywords":"Medicine; Placebo; Internal medicine; Sepsis; Tolerability; Proinflammatory cytokine; Immunology; Adverse effect; Gastroenterology; Inflammation; Pathology","score_opus":0.009388701819016675,"score_gpt":0.284480393267328,"score_spread":0.2750916914483113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138167941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992276,0.0011629027,0.0005060623,0.0005013126,0.00020512429,0.0034978562,0.0007328808,0.000065268265,0.0010527062],"genre_scores_gemma":[0.98602444,0.0013193261,0.0017891042,0.0014009881,0.00036079515,0.0049214917,0.0016891811,0.000019066814,0.002475554],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9995364,0.00024921753,0.000025522138,0.00007442033,0.000030121164,0.00008439089],"domain_scores_gemma":[0.9992255,0.00016245141,0.00015799556,0.00006644124,0.00007670523,0.00031088822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017838452,0.0018936809,0.001972421,0.0002818067,0.0003447664,0.0007950015,0.0005890864,0.0012216538,0.0037595278],"category_scores_gemma":[0.0012606765,0.0006413803,0.0011400443,0.00024369478,0.00072784955,0.00066968385,0.00027383887,0.0022909727,0.0006381092],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.95977366,0.016675858,0.0016812099,0.00023094777,0.00040085867,0.000055999375,0.00005383297,0.00041519807,0.006570459,0.00007366246,0.0009121443,0.0131561225],"study_design_scores_gemma":[0.8661399,0.13006075,0.0023243804,0.000011535562,0.00012914333,0.00003317194,0.000014413485,0.00031249662,0.0005150983,0.000048128237,0.00040169928,0.0000092241735],"about_ca_topic_score_codex":0.000970288,"about_ca_topic_score_gemma":0.0015225628,"teacher_disagreement_score":0.0037595278,"about_ca_system_score_codex":0.0005911948,"about_ca_system_score_gemma":0.0015339763,"threshold_uncertainty_score":0.012576878},"labels":[],"label_agreement":null},{"id":"W2138230377","doi":"10.4049/jimmunol.1401605","title":"TRAM Is Required for TLR2 Endosomal Signaling to Type I IFN Induction","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":109,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Wellcome Trust","keywords":"Endosome; Cell biology; TLR2; Chemistry; Signal transduction; Biology","score_opus":0.019839588433517262,"score_gpt":0.2577133236561203,"score_spread":0.23787373522260305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138230377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908399,0.0024168738,0.0034730055,0.00021014259,0.00008475763,0.000029278468,0.0011556653,0.00015249116,0.0016378483],"genre_scores_gemma":[0.98971725,0.00058752514,0.0026828204,0.00011986877,0.000020245689,0.00004637286,0.0025687679,0.00006344703,0.0041935565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997203,0.00003897793,0.000027439313,0.000055934146,0.00006817583,0.00008917425],"domain_scores_gemma":[0.99964774,0.00003703793,0.0001377426,0.0000546066,0.000037184276,0.000085698426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001774258,0.00041589755,0.00028500907,0.000338441,0.00037545507,0.00043459365,0.0003526302,0.00050415617,0.0023672183],"category_scores_gemma":[0.00026984114,0.00027745156,0.00066532556,0.00016023322,0.00020489786,0.0002673928,0.0005337335,0.000792139,0.002032122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105242696,0.000014839922,0.00030490092,0.000033985834,0.00000555434,0.00010339311,0.000013308231,0.000029252447,0.99875367,0.000079406585,0.000054616998,0.00050178275],"study_design_scores_gemma":[0.000027814489,0.00015658181,0.024834538,0.000023453844,0.00002533403,0.0013367677,0.00011266727,0.001745928,0.96379924,0.000092937786,0.007825535,0.000019274048],"about_ca_topic_score_codex":0.0012199177,"about_ca_topic_score_gemma":0.0013209078,"teacher_disagreement_score":0.0023672183,"about_ca_system_score_codex":0.00062787585,"about_ca_system_score_gemma":0.0004127383,"threshold_uncertainty_score":0.007919192},"labels":[],"label_agreement":null},{"id":"W2138291177","doi":"10.1073/pnas.0404722101","title":"A β-oxidation-resistant lipoxin A <sub>4</sub> analog treats hapten-induced colitis by attenuating inflammation and immune dysfunction","year":2004,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Università degli Studi di Perugia; Fondation pour la Recherche Médicale","keywords":"Colitis; Tumor necrosis factor alpha; Immunology; Immune system; Cytokine; Inflammation; Pharmacology; Medicine; Chemistry","score_opus":0.019014647812110957,"score_gpt":0.249560006256382,"score_spread":0.23054535844427104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138291177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99297756,0.0032523267,0.0018632297,0.000103128325,0.000043443477,0.00008179186,0.00017701396,0.00011388364,0.0013875257],"genre_scores_gemma":[0.9922921,0.002400471,0.002677103,0.0000930472,0.000029575287,0.000045073368,0.00041571137,0.000014018436,0.0020329359],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999634,0.000006300824,0.0000061383994,0.0000058334763,0.0000080813115,0.000010227275],"domain_scores_gemma":[0.9999517,0.0000042598385,0.000020888325,0.0000053822964,0.000004340916,0.00001354138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000058133883,0.00034298937,0.00023038831,0.00026029808,0.00008564825,0.0001286235,0.0001952064,0.0002015294,0.001506317],"category_scores_gemma":[0.000054655018,0.00009793602,0.00015317442,0.000109037195,0.00018859505,0.00019868826,0.00011776783,0.00040898027,0.0003967847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000860391,0.00020844511,0.00028885555,0.00009875091,0.000016115693,0.00009157335,0.000007195036,0.000110322515,0.98950034,0.00007786179,0.00007299638,0.008667048],"study_design_scores_gemma":[0.00047516465,0.012473529,0.011206226,0.000015583557,0.000098436554,0.0016138443,0.0000364952,0.00060889235,0.96477413,0.000099462864,0.008585407,0.000012782537],"about_ca_topic_score_codex":0.000271944,"about_ca_topic_score_gemma":0.00049718027,"teacher_disagreement_score":0.001506317,"about_ca_system_score_codex":0.00014094503,"about_ca_system_score_gemma":0.0001446781,"threshold_uncertainty_score":0.0050391555},"labels":[],"label_agreement":null},{"id":"W2138298422","doi":"10.4049/jimmunol.172.10.6202","title":"Toll-Like Receptor 4 Dependence of Innate and Adaptive Immunity to <i>Salmonella</i> : Importance of the Kupffer Cell Network","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":173,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"TLR4; Innate immune system; Biology; Acquired immune system; Salmonella; Toll-like receptor; Immune system; Receptor; Chemokine; Microbiology; Immunology; Bacteria; Cell biology; Genetics","score_opus":0.008266445902507028,"score_gpt":0.20729997024579347,"score_spread":0.19903352434328644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138298422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958104,0.0011345843,0.0009944114,0.00010606908,0.000015246273,0.000007847764,0.00013435126,0.0000657267,0.001731407],"genre_scores_gemma":[0.9965469,0.0003614415,0.0005992487,0.000038055707,0.000008422098,0.000011631988,0.00035201196,0.000017119844,0.0020651862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978155,0.00003672242,0.000018060719,0.000028330838,0.000042530515,0.00009278895],"domain_scores_gemma":[0.9996538,0.000023188255,0.00009646398,0.000048115915,0.000050389663,0.00012801174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000236116,0.0003150567,0.00015524135,0.00025797397,0.00014065261,0.00031037163,0.00019567544,0.0001920302,0.0012862124],"category_scores_gemma":[0.0002246435,0.00015694165,0.00017913758,0.000066202985,0.00034058158,0.00034095178,0.00030031154,0.00040908248,0.00047218575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041039073,0.000017080267,0.0011140772,0.000027876029,0.0000041010703,0.0000834293,0.000012994094,0.000041729032,0.99639314,0.00022493153,0.000039439667,0.0016306889],"study_design_scores_gemma":[0.000061615996,0.0004132308,0.058678403,0.000014564211,0.000027806798,0.0010619478,0.00006119833,0.0008661337,0.93608147,0.00041204903,0.0023122302,0.0000093971585],"about_ca_topic_score_codex":0.00042690194,"about_ca_topic_score_gemma":0.00060823734,"teacher_disagreement_score":0.0012862124,"about_ca_system_score_codex":0.00037708174,"about_ca_system_score_gemma":0.00035521167,"threshold_uncertainty_score":0.0043027997},"labels":[],"label_agreement":null},{"id":"W2138541168","doi":"10.2746/042516401776249246","title":"Equine neutrophils express mRNA for tumour necrosis factor‐α, interleukin (IL)‐1β, IL‐6, IL‐8, macrophage‐inflammatory‐protein‐2 but not for IL‐4, IL‐5 and interferon‐γ","year":2001,"lang":"en","type":"article","venue":"Equine Veterinary Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"Université de Montréal","keywords":"Tumor necrosis factor alpha; Medicine; Immunology","score_opus":0.03252890365356218,"score_gpt":0.27535344435501496,"score_spread":0.2428245407014528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138541168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98967546,0.0026565173,0.0022431652,0.00012817638,0.000075857155,0.000053417698,0.0004263776,0.00003802098,0.004703119],"genre_scores_gemma":[0.9810555,0.0017183117,0.0016769422,0.00014748677,0.000049900584,0.000089596724,0.00083016756,0.000012324468,0.014419871],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987197,0.000017649998,0.000010234107,0.000027037491,0.000034199493,0.000038847313],"domain_scores_gemma":[0.9996917,0.00006729711,0.00007361042,0.00004982882,0.0000834272,0.0000340622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018369102,0.0003622216,0.0002516907,0.00023575292,0.00028033415,0.00036647113,0.000065896435,0.00037115306,0.0026667186],"category_scores_gemma":[0.00036648262,0.00015134714,0.00014080117,0.00012527849,0.00025014358,0.00026624804,0.00019939936,0.00038148643,0.00074005453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004377125,0.000037738304,0.0049458095,0.0001147786,0.000010115347,0.0003921512,0.00031548995,0.00004591286,0.98840487,0.00012898899,0.00013549735,0.005030839],"study_design_scores_gemma":[0.000099073266,0.0017259638,0.20126528,0.00013538984,0.00011679786,0.006057857,0.0017760454,0.00074350176,0.766262,0.0006611499,0.021126805,0.000030135323],"about_ca_topic_score_codex":0.00070839166,"about_ca_topic_score_gemma":0.0011156821,"teacher_disagreement_score":0.0026667186,"about_ca_system_score_codex":0.00021905637,"about_ca_system_score_gemma":0.00016224325,"threshold_uncertainty_score":0.008921027},"labels":[],"label_agreement":null},{"id":"W2138836263","doi":"10.1080/0962935031000096962","title":"Upregulation of expression of the chemokine receptor CCR5 by hydrogen peroxide in human monocytes","year":2003,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chemokine; Hydrogen peroxide; Downregulation and upregulation; Oxidative stress; Chemistry; Chemokine receptor; Receptor; Monocyte; Cell biology; Molecular biology; Chemotaxis; Flow cytometry; C-C chemokine receptor type 6; Gene expression; Biology; Immunology; Biochemistry; Gene","score_opus":0.004773714689792741,"score_gpt":0.2092194375100476,"score_spread":0.20444572282025486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138836263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99388725,0.004366771,0.000859937,0.00009063652,0.000033316042,0.000027489445,0.00011636128,0.000012981157,0.00060529576],"genre_scores_gemma":[0.99698204,0.0014424588,0.00059830607,0.00005832645,0.000026094083,0.000023294506,0.00014303268,0.0000015234637,0.0007248111],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982953,0.00005726056,0.000010156939,0.000017627513,0.000034595185,0.000050820163],"domain_scores_gemma":[0.99992776,0.000013089004,0.000019922883,0.000010809541,0.000015987081,0.000012478686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019615964,0.00018569258,0.00020341726,0.00016754711,0.00017274327,0.00033759797,0.000070239665,0.00023141952,0.0012439276],"category_scores_gemma":[0.0002100845,0.00012280286,0.0001714296,0.00010634193,0.00012764752,0.0001200696,0.00016954844,0.00022649633,0.0003189931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013208374,0.000061152525,0.0032795332,0.00012893096,0.00001088092,0.00049986644,0.00015336445,0.00005664153,0.9872329,0.00014126224,0.00016073423,0.0069540567],"study_design_scores_gemma":[0.00021512115,0.005191097,0.12782036,0.00006442695,0.00011473097,0.0025541496,0.0008627085,0.0010732915,0.8521717,0.00031199245,0.009594353,0.000026077903],"about_ca_topic_score_codex":0.00064164476,"about_ca_topic_score_gemma":0.00064374175,"teacher_disagreement_score":0.0012439276,"about_ca_system_score_codex":0.00017159362,"about_ca_system_score_gemma":0.00013114342,"threshold_uncertainty_score":0.0041612983},"labels":[],"label_agreement":null},{"id":"W2139101608","doi":"10.1007/978-3-642-59672-8_12","title":"Use of CpG DNA for Enhancing Specific Immune Responses","year":2000,"lang":"en","type":"review","venue":"Current topics in microbiology and immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agricultural Research Institute of Ontario","funders":"","keywords":"Adjuvant; CpG Oligodeoxynucleotide; Antigen; Immune system; CpG site; Immunology; Biology; Medicine; Gene; Genetics; DNA methylation; Gene expression","score_opus":0.0694471210997794,"score_gpt":0.3222497947614644,"score_spread":0.252802673661685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139101608","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022477638,0.9862621,0.00462892,0.0003303458,0.00084533606,0.00003916694,0.000034674445,0.0000691351,0.0055425386],"genre_scores_gemma":[0.009090196,0.9800305,0.0040248795,0.0006068152,0.00045952178,0.00005290276,0.00009850471,0.000010968697,0.005625681],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999026,0.000012938556,0.000009235383,0.000023791976,0.00003853993,0.0000129468135],"domain_scores_gemma":[0.99988806,0.00004954498,0.00001717888,0.0000071993777,0.00002607806,0.000011914974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038681863,0.0010618753,0.00094203063,0.0008028647,0.00015034719,0.00042881485,0.0008563901,0.0010493131,0.0023837981],"category_scores_gemma":[0.00027950603,0.00016355481,0.00024734274,0.0007607949,0.00041245847,0.00072445144,0.0003777515,0.0014686846,0.0018038437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015322806,0.00012645373,0.00012030026,0.0048453757,0.000036623536,0.00030774286,0.000027200656,0.00037734472,0.05916672,0.001945095,0.004931224,0.9279628],"study_design_scores_gemma":[0.00013130093,0.0009036044,0.0020813514,0.0016535427,0.00020512406,0.0059011653,0.000081810416,0.0005255517,0.10994122,0.0030200034,0.8754908,0.0000645065],"about_ca_topic_score_codex":0.0004248706,"about_ca_topic_score_gemma":0.0006342965,"teacher_disagreement_score":0.0023837981,"about_ca_system_score_codex":0.0003028619,"about_ca_system_score_gemma":0.00034940627,"threshold_uncertainty_score":0.007974625},"labels":[],"label_agreement":null},{"id":"W2139150306","doi":"10.4049/jimmunol.0901481","title":"Neonatal Innate TLR-Mediated Responses Are Distinct from Those of Adults","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":462,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Infectious Diseases Centre; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Innate immune system; Immunology; Biology; Medicine; Immune system","score_opus":0.009298852574924837,"score_gpt":0.23429512979279504,"score_spread":0.22499627721787022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139150306","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885245,0.00634091,0.0015718439,0.00015887797,0.000025600846,0.000021922971,0.00044072056,0.00003685014,0.002878801],"genre_scores_gemma":[0.99057615,0.0049067074,0.0018944874,0.00022533054,0.000029798355,0.00007486735,0.0006138745,0.000016353304,0.0016623669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972385,0.00008602283,0.00003446551,0.000044618315,0.000054894343,0.00005606781],"domain_scores_gemma":[0.9995158,0.000107605774,0.00015046449,0.000048323644,0.000067373425,0.00011045075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046265364,0.00022033877,0.00029671768,0.0002451955,0.000091987575,0.00040667737,0.00016270818,0.00023563292,0.0023115154],"category_scores_gemma":[0.00096865126,0.00014303465,0.00014125032,0.00013478941,0.00023759676,0.0003231791,0.00031442838,0.00028280469,0.0006774489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030238307,0.0000965326,0.07268295,0.0007826464,0.000047085374,0.002167228,0.00080948917,0.00014873472,0.85396516,0.0010063731,0.0007996491,0.064470395],"study_design_scores_gemma":[0.00011395082,0.00417836,0.6771921,0.00048541708,0.0001960937,0.024949871,0.0026076413,0.00073524856,0.2618194,0.0018094472,0.025846062,0.0000664016],"about_ca_topic_score_codex":0.00021119314,"about_ca_topic_score_gemma":0.00025576,"teacher_disagreement_score":0.0023115154,"about_ca_system_score_codex":0.00019061042,"about_ca_system_score_gemma":0.00024206868,"threshold_uncertainty_score":0.0077328086},"labels":[],"label_agreement":null},{"id":"W2139265563","doi":"10.4049/jimmunol.179.9.6237","title":"The Role of IκB Kinase 2, but Not Activation of NF-κB, in the Release of CXCR3 Ligands from IFN-γ-Stimulated Human Bronchial Epithelial Cells","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CXCR3; CXCL10; Cytotoxic T cell; CD8; Chemokine; IκB kinase; Chemistry; CXCL9; Molecular biology; Stimulation; T cell; Pharmacology; Signal transduction; NF-κB; Biology; Immunology; Biochemistry; Endocrinology; In vitro; Immune system; Receptor; Chemokine receptor","score_opus":0.006868943597649022,"score_gpt":0.23010965427830013,"score_spread":0.2232407106806511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139265563","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9531312,0.036355052,0.004158195,0.0003603453,0.00015966264,0.0000886563,0.0013190786,0.00012525397,0.00430256],"genre_scores_gemma":[0.9908832,0.004497088,0.0016255449,0.000095795425,0.000053074622,0.0000847615,0.00067969767,0.000014079707,0.0020667706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997924,0.000041205494,0.00002168817,0.000037833142,0.000041849198,0.00006502869],"domain_scores_gemma":[0.999835,0.000025360338,0.000058195616,0.000019773492,0.000018498755,0.00004313453],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040628872,0.0006819596,0.0003084298,0.00021977519,0.00020661466,0.0005747341,0.00025545782,0.00044876005,0.0021913615],"category_scores_gemma":[0.00026269903,0.00024737717,0.0003740284,0.00014181496,0.00030028523,0.00041367186,0.00019384554,0.00049484114,0.0008772305],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004615222,0.00004995642,0.00036019768,0.00013664484,0.000011493714,0.00012089668,0.000026149131,0.000060412116,0.9973584,0.000068269306,0.00004848328,0.0012975128],"study_design_scores_gemma":[0.00029404613,0.0010037802,0.039354272,0.000087566674,0.00006166899,0.0024890413,0.00015078453,0.0016099334,0.9500163,0.00026225983,0.0046477867,0.00002254834],"about_ca_topic_score_codex":0.00063775596,"about_ca_topic_score_gemma":0.000665853,"teacher_disagreement_score":0.0021913615,"about_ca_system_score_codex":0.00033231804,"about_ca_system_score_gemma":0.00038616481,"threshold_uncertainty_score":0.007330835},"labels":[],"label_agreement":null},{"id":"W2140019582","doi":"10.1371/journal.pone.0006818","title":"Serum Lipopolysaccharide Binding Protein Levels Predict Severity of Lung Injury and Mortality in Patients with Severe Sepsis","year":2009,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Instituto de Salud Carlos III; Fundación Canaria de Investigación y Salud","keywords":"Medicine; ARDS; Lipopolysaccharide binding protein; Sepsis; Internal medicine; Gastroenterology; Biomarker; Odds ratio; Prospective cohort study; Intensive care unit; Severity of illness; C-reactive protein; Systemic inflammatory response syndrome; Respiratory distress; White blood cell; Acute-phase protein; Lung; Surgery; Inflammation","score_opus":0.015841537995173623,"score_gpt":0.22224709258607425,"score_spread":0.20640555459090063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140019582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99948466,0.00024864514,0.00008405617,0.00003577662,0.000007285429,0.000005600008,0.000068944726,0.0000026963212,0.000062371844],"genre_scores_gemma":[0.99954766,0.00006350687,0.00015378465,0.000027307193,0.000015889078,0.000008217612,0.00014959276,7.0331976e-7,0.00003339636],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997174,0.00010568134,0.00003978816,0.000043659922,0.000048320762,0.000045154655],"domain_scores_gemma":[0.99826944,0.0003945164,0.00070968503,0.00006349907,0.00017133537,0.00039141896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069942913,0.0004414372,0.00045884118,0.00035910186,0.000223599,0.00045438975,0.00020646873,0.0005173373,0.0007695778],"category_scores_gemma":[0.002084731,0.00019106969,0.0002880182,0.00029414357,0.00028158646,0.00029315753,0.0003602779,0.00064366474,0.0001901885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046762355,0.00006013265,0.9977198,0.000011235312,0.000031831485,0.00003367167,0.000022105789,0.00004602947,0.00056203327,0.000003613368,0.000058511618,0.0009832955],"study_design_scores_gemma":[0.00003618307,0.0007071311,0.9980945,0.000008632825,0.000028909184,0.00031720975,0.00008782426,0.00043691322,0.00018363279,0.000022375298,0.000072088726,0.000004636453],"about_ca_topic_score_codex":0.00047002733,"about_ca_topic_score_gemma":0.0004160604,"teacher_disagreement_score":0.0007695778,"about_ca_system_score_codex":0.0001690938,"about_ca_system_score_gemma":0.00030288735,"threshold_uncertainty_score":0.0036990047},"labels":[],"label_agreement":null},{"id":"W2140229797","doi":"10.1111/j.1365-2567.2007.02619.x","title":"Differential regulation of lipopolysaccharide and Gram‐positive bacteria induced cytokine and chemokine production in macrophages by Gα<sub>i</sub> proteins","year":2007,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; National Institutes of Health","keywords":"Chemokine; Cytokine; Lipopolysaccharide; Macrophage inflammatory protein; Biology; Tumor necrosis factor alpha; Microbiology; Macrophage; Immunology; Chemistry; Interleukin; Inflammation; Biochemistry; In vitro","score_opus":0.004908305534933586,"score_gpt":0.20943063654950772,"score_spread":0.20452233101457412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140229797","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985065,0.00050444854,0.0005382653,0.00004217495,0.0000076260426,0.000008291699,0.000085357264,0.000022095344,0.0002851808],"genre_scores_gemma":[0.997778,0.00044598835,0.00087633875,0.000063543695,0.0000061310798,0.000034131812,0.00021900186,0.000013017689,0.00056382833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998442,0.00003889824,0.0000118183725,0.000025386704,0.000022656493,0.000057086974],"domain_scores_gemma":[0.9998807,0.000014848495,0.000041473366,0.000013865182,0.000009841014,0.00003919339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012657665,0.0004087589,0.00023345952,0.00018004877,0.00007290778,0.00024069473,0.00015773784,0.00025386046,0.00060326303],"category_scores_gemma":[0.00011533993,0.000162486,0.00025875604,0.000089033885,0.00041672483,0.00021734663,0.0002213459,0.00042130132,0.00026152973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029021213,0.000012129396,0.00022217748,0.000010923409,0.0000024912472,0.00002894538,0.0000074468517,0.000022509086,0.99910307,0.000037997615,0.0000076050333,0.0002545019],"study_design_scores_gemma":[0.00007431104,0.0010731885,0.01873628,0.000012640451,0.000029396964,0.00040503888,0.0000772286,0.0008568772,0.9778546,0.00018727049,0.00068453874,0.000008644134],"about_ca_topic_score_codex":0.0001775026,"about_ca_topic_score_gemma":0.00016436982,"teacher_disagreement_score":0.00060326303,"about_ca_system_score_codex":0.00023828348,"about_ca_system_score_gemma":0.000115946095,"threshold_uncertainty_score":0.002018094},"labels":[],"label_agreement":null},{"id":"W2140472119","doi":"10.1189/jlb.0311124","title":"SHIP-deficient, alternatively activated macrophages protect mice during DSS-induced colitis","year":2011,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada","keywords":"Inflammation; Colitis; Adoptive cell transfer; Immune system; In vivo; Immunology; Biology; Infiltration (HVAC); T cell","score_opus":0.036346203546658545,"score_gpt":0.26176988804184387,"score_spread":0.22542368449518532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140472119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962624,0.00083900127,0.0011165015,0.00025023922,0.00007023672,0.00007975093,0.00047851057,0.0001266008,0.0007768182],"genre_scores_gemma":[0.9886856,0.0011890328,0.002943822,0.00030102878,0.000049587514,0.00025001756,0.0009690795,0.000045700806,0.0055660596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996705,0.000049018032,0.00005455428,0.000065147135,0.000065103035,0.00009565083],"domain_scores_gemma":[0.9996006,0.000030481755,0.00014601956,0.000037305632,0.000029313713,0.00015634524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004050429,0.0007398038,0.00064192765,0.0005515558,0.00027217768,0.0003436859,0.00034398012,0.00077618315,0.0012830305],"category_scores_gemma":[0.0001706689,0.00038388968,0.0005309451,0.00020063767,0.0004094435,0.00041863523,0.00026798723,0.0019870196,0.00063431886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002335289,0.00067692605,0.00053530594,0.000111137626,0.0000255322,0.0001563452,0.0000808225,0.00017595237,0.9933455,0.00017975326,0.00014951323,0.0022278342],"study_design_scores_gemma":[0.0011305225,0.017463354,0.015060032,0.00012267247,0.00018286913,0.0011535645,0.0002716494,0.0031222794,0.9555237,0.00045931095,0.0054693134,0.00004072513],"about_ca_topic_score_codex":0.00030577483,"about_ca_topic_score_gemma":0.0006159762,"teacher_disagreement_score":0.0012830305,"about_ca_system_score_codex":0.0002396921,"about_ca_system_score_gemma":0.00039943712,"threshold_uncertainty_score":0.0042921305},"labels":[],"label_agreement":null},{"id":"W2140541855","doi":"10.1038/sj.gene.6364398","title":"The role of the Toll receptor pathway in susceptibility to inflammatory bowel diseases","year":2007,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":147,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute; University of Toronto; Mount Sinai Hospital; Hôpital Fleurimont; Centre Hospitalier Universitaire de Sherbrooke; McGill University Health Centre; McGill University; Jewish General Hospital; Montreal General Hospital","funders":"National Institute of Neurological Disorders and Stroke; Fonds De La Recherche Scientifique - FNRS; Pfizer; National Institute of Diabetes and Digestive and Kidney Diseases; Crohn's and Colitis Foundation of America","keywords":"Inflammatory bowel disease; Biology; Immunology; Allele; Ulcerative colitis; Odds ratio; TLR4; Genotyping; Toll-like receptor; Haplotype; NOD2; Disease; Genetics; Genotype; Gene; Internal medicine; Inflammation; Medicine; Immune system; Innate immune system","score_opus":0.005251646108765755,"score_gpt":0.21246318961391844,"score_spread":0.2072115435051527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140541855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808446,0.014964374,0.0010333417,0.0008234378,0.000053957534,0.0000069710027,0.00017959037,0.000028736706,0.0020648648],"genre_scores_gemma":[0.9971934,0.0017826735,0.0003577979,0.000060830072,0.00003867701,0.000004374497,0.00004973668,0.0000048997836,0.00050769263],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998379,0.000073486,0.000013676218,0.000021122854,0.000020707883,0.000033095836],"domain_scores_gemma":[0.99975497,0.00007116608,0.000078562705,0.000019708428,0.000018515946,0.000057105404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002674438,0.00026767238,0.00029059133,0.0005301549,0.00013078589,0.0003801035,0.00013627522,0.00035349253,0.0014767234],"category_scores_gemma":[0.0005406273,0.00012440827,0.00015011155,0.0002075179,0.0002578982,0.00031194297,0.00029907154,0.0004732711,0.00020995837],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016309865,0.00031726345,0.15589362,0.0005223903,0.00022506714,0.0036276116,0.00024394802,0.0013372196,0.7125601,0.0039124144,0.0012575998,0.10379292],"study_design_scores_gemma":[0.00048071131,0.0021405667,0.86591744,0.00022412019,0.00038304858,0.015377908,0.00069476926,0.0048514996,0.085761026,0.012150832,0.011944976,0.00007313134],"about_ca_topic_score_codex":0.00014759408,"about_ca_topic_score_gemma":0.00011418541,"teacher_disagreement_score":0.0014767234,"about_ca_system_score_codex":0.00014067099,"about_ca_system_score_gemma":0.0001302239,"threshold_uncertainty_score":0.004940152},"labels":[],"label_agreement":null},{"id":"W2140734135","doi":"10.1378/chest.126.3.860","title":"Experimental Human Endotoxemia Is Associated With Depression of Load-Independent Contractility Indices","year":2004,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Health Sciences Centre","funders":"","keywords":"Medicine; Contractility; Depression (economics); Cardiology; Internal medicine","score_opus":0.012821240842392976,"score_gpt":0.259694390451673,"score_spread":0.24687314960928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140734135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99862003,0.00034609795,0.0004793919,0.000035410543,0.000021297235,0.000020968131,0.00010625621,0.0000136730105,0.0003568232],"genre_scores_gemma":[0.9990546,0.00021284398,0.00017637445,0.000021883843,0.000025065818,0.000040762076,0.00019284734,0.000004699193,0.00027097174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997595,0.000055749468,0.00002028455,0.00004540957,0.00005956897,0.00005955142],"domain_scores_gemma":[0.9989354,0.00023825368,0.00036496972,0.00018046028,0.00004592725,0.00023491429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033220023,0.0006433321,0.00073563313,0.0003924011,0.00026771345,0.00033743063,0.00023669687,0.00050570664,0.0022134464],"category_scores_gemma":[0.0008657921,0.00029631736,0.00025803052,0.00029318465,0.0009385706,0.00033337378,0.00044056782,0.0012179328,0.00026769482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.043589003,0.0016120267,0.02910964,0.00018019225,0.000111194626,0.0025074964,0.0002556183,0.00031865225,0.91444945,0.00034004208,0.00017439801,0.007352286],"study_design_scores_gemma":[0.0005405969,0.020714326,0.6478338,0.00003722112,0.00024966343,0.0050901696,0.0003097121,0.0023494319,0.32129124,0.0004870016,0.0010450552,0.000051757692],"about_ca_topic_score_codex":0.0001957751,"about_ca_topic_score_gemma":0.00016526403,"teacher_disagreement_score":0.0022134464,"about_ca_system_score_codex":0.00022465445,"about_ca_system_score_gemma":0.00024387633,"threshold_uncertainty_score":0.0074047446},"labels":[],"label_agreement":null},{"id":"W2140783807","doi":"10.1155/2009/193970","title":"Interleukin (IL)-4 Induces Leukocyte Infiltration In Vivo by an Indirect Mechanism","year":2009,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research; Armand-Frappier Foundation","keywords":"In vivo; Pouch; Cytokine; Infiltration (HVAC); Ex vivo; Immunology; Interleukin; Interleukin 8; Molecular biology; Biology; Chemistry; Anatomy; Materials science","score_opus":0.0070337433746725745,"score_gpt":0.2265333885101562,"score_spread":0.21949964513548362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2140783807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98755926,0.004735241,0.0044493317,0.00022794702,0.000098034114,0.00006770475,0.0001381953,0.00015940242,0.0025648384],"genre_scores_gemma":[0.98852575,0.0026572815,0.0037143899,0.00015940952,0.0001360386,0.00011598196,0.00024138625,0.000024567142,0.0044251396],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99935657,0.00027733916,0.000040864048,0.000072885705,0.00011815195,0.0001341297],"domain_scores_gemma":[0.9997038,0.000078035846,0.00008774618,0.000046105168,0.000027708873,0.00005652065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003705019,0.0008450075,0.00038914284,0.00044153503,0.00012773128,0.00053579203,0.00018995634,0.0004113296,0.0028326616],"category_scores_gemma":[0.0002989786,0.00022989394,0.0004093772,0.00015931304,0.00038361695,0.0003487535,0.00042875763,0.0008006193,0.00092918356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027382307,0.000076875556,0.00034036112,0.000087215325,0.0000067230603,0.000086565335,0.000014676184,0.000019952091,0.997133,0.000063293,0.000042202904,0.0018551276],"study_design_scores_gemma":[0.00015870848,0.005017376,0.016562719,0.000041025167,0.0000866795,0.0008152354,0.000084011604,0.00088859996,0.9737344,0.0001970433,0.0024053094,0.000008947088],"about_ca_topic_score_codex":0.00007890715,"about_ca_topic_score_gemma":0.00017731753,"teacher_disagreement_score":0.0028326616,"about_ca_system_score_codex":0.0001975761,"about_ca_system_score_gemma":0.0001778611,"threshold_uncertainty_score":0.009476185},"labels":[],"label_agreement":null},{"id":"W2141040025","doi":"10.1126/science.1158298","title":"Pyogenic Bacterial Infections in Humans with MyD88 Deficiency","year":2008,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1281,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service; Howard Hughes Medical Institute","keywords":"Immunology; Immunity; Receptor; Innate immune system; Disease; Biology; Medicine; Microbiology; Immune system; Internal medicine","score_opus":0.010815025972491224,"score_gpt":0.2253049527303628,"score_spread":0.21448992675787157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141040025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99460053,0.0017752326,0.0006496755,0.0002461739,0.000018431045,0.000025468626,0.00010943536,0.00005134966,0.0025237433],"genre_scores_gemma":[0.9987649,0.00042572504,0.00030556193,0.00012067375,0.000028265156,0.0000072994253,0.00007243246,0.000007518167,0.00026767305],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99968684,0.00007993687,0.000028484112,0.00008356423,0.00004862373,0.00007255313],"domain_scores_gemma":[0.99969196,0.000058298712,0.00013848551,0.00002505145,0.000020929592,0.00006525548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002507745,0.0006026398,0.0005389184,0.000593116,0.00075766904,0.00040878402,0.0001647285,0.000601493,0.0023964162],"category_scores_gemma":[0.0011758714,0.0003205399,0.00017995507,0.00033709948,0.0008392324,0.0004857632,0.0007235776,0.00050603144,0.00036043575],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016069709,0.00030696177,0.76802397,0.00028681415,0.000110118664,0.13393377,0.00217316,0.00025943905,0.04131019,0.0012391872,0.0029010733,0.04784837],"study_design_scores_gemma":[0.00007381027,0.001065574,0.54033107,0.00011836924,0.00008259533,0.44915348,0.0007084103,0.00026903188,0.0035484703,0.00100451,0.0036078636,0.000036806767],"about_ca_topic_score_codex":0.0006087982,"about_ca_topic_score_gemma":0.00045816263,"teacher_disagreement_score":0.0023964162,"about_ca_system_score_codex":0.0002148607,"about_ca_system_score_gemma":0.00019576932,"threshold_uncertainty_score":0.008016765},"labels":[],"label_agreement":null},{"id":"W2141345225","doi":"10.1016/j.jaci.2006.11.514","title":"Ethnicity Plays a Role in Differential Human Toll-like Receptor Responsiveness","year":2007,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"TLR2; Stimulation; CXCL10; TLR4; Chemokine; CCL2; Immunology; TLR9; Receptor; Innate immune system; Toll-like receptor; Ethnic group; Peripheral blood mononuclear cell; Medicine; Inflammation; Immune system; Biology; Endocrinology; Internal medicine; Gene; Gene expression; Genetics; In vitro","score_opus":0.020673792820768262,"score_gpt":0.3183269861744363,"score_spread":0.297653193353668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141345225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968923,0.0005968771,0.0003981583,0.00012248996,0.000041400668,0.000006969095,0.0002260013,0.000008738861,0.0017072128],"genre_scores_gemma":[0.9986914,0.00017373056,0.00012515551,0.00006420238,0.000022606557,0.0000047021417,0.000117126525,0.000018107437,0.00078297954],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99922526,0.0003297394,0.00008343919,0.000117611795,0.00011645084,0.00012752718],"domain_scores_gemma":[0.9986185,0.0006126708,0.0003095501,0.00017843411,0.00010227426,0.00017866655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079852104,0.00020851198,0.00040938458,0.00059478346,0.00030260102,0.0009602541,0.00026948994,0.00041568375,0.006483065],"category_scores_gemma":[0.0018842985,0.00018143644,0.00041324124,0.0005523581,0.0003844262,0.00036524635,0.000505591,0.00042211174,0.0009796891],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010432637,0.00041176673,0.580643,0.00020555052,0.0006835576,0.002095394,0.0013889092,0.00042203793,0.36918405,0.002287727,0.0010757898,0.031169582],"study_design_scores_gemma":[0.00007686707,0.00041367757,0.9640319,0.00003176496,0.0002988814,0.0022568468,0.0006390534,0.0007205574,0.028331146,0.0010624225,0.0021003492,0.000036512014],"about_ca_topic_score_codex":0.00081681204,"about_ca_topic_score_gemma":0.0007682834,"teacher_disagreement_score":0.006483065,"about_ca_system_score_codex":0.0001717647,"about_ca_system_score_gemma":0.0002442221,"threshold_uncertainty_score":0.021688044},"labels":[],"label_agreement":null},{"id":"W2141506792","doi":"10.1079/ahr2005107","title":"Passive and active components of neonatal innate immune defenses","year":2005,"lang":"en","type":"review","venue":"Animal Health Research Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Beef Cattle Research Council","keywords":"Innate immune system; Immune system; Neuroscience; Biology; Immunology; Chemistry","score_opus":0.28525979274605534,"score_gpt":0.482303220523706,"score_spread":0.19704342777765066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141506792","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00051703135,0.9950311,0.0003853375,0.0001486159,0.00019556032,0.000008544729,0.000014763264,0.000013200126,0.0036858674],"genre_scores_gemma":[0.0035096628,0.9912162,0.00051748176,0.00015537161,0.0002077334,0.000021516673,0.000036240282,0.0000023519956,0.004333452],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981457,0.00003152928,0.00002394484,0.00003839351,0.000074657524,0.000016917109],"domain_scores_gemma":[0.9998723,0.000038375227,0.000021085985,0.000006674965,0.00004245527,0.000019025216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003562961,0.00088384515,0.0010938894,0.0010843772,0.00021493282,0.000740699,0.0006987975,0.00090609805,0.0035059548],"category_scores_gemma":[0.00033360237,0.00016823228,0.00021829514,0.00083682203,0.00045073323,0.0010390829,0.00040832546,0.00075790944,0.0031138905],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010826146,0.00006786404,0.0003183939,0.0075716083,0.000019591853,0.0004105681,0.0001157014,0.00014377112,0.012401661,0.005257946,0.008815662,0.96476907],"study_design_scores_gemma":[0.0000138908135,0.00022200834,0.002561919,0.0023368867,0.000045999903,0.0037672142,0.00014951632,0.00006580829,0.0046659284,0.0033354,0.98281777,0.000017640015],"about_ca_topic_score_codex":0.000574038,"about_ca_topic_score_gemma":0.00059852924,"teacher_disagreement_score":0.0035059548,"about_ca_system_score_codex":0.00044242066,"about_ca_system_score_gemma":0.0005845549,"threshold_uncertainty_score":0.011728585},"labels":[],"label_agreement":null},{"id":"W2141753982","doi":"10.1084/jem.20041964","title":"A type I interferon autocrine–paracrine loop is involved in Toll-like receptor-induced interleukin-12p70 secretion by dendritic cells","year":2005,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":535,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Toll-like receptor; Autocrine signalling; TLR7; Cell biology; Interferon; Secretion; STAT1; Paracrine signalling; TLR3; Receptor; Signal transduction; Immunology; Innate immune system; Biochemistry","score_opus":0.017658178047169532,"score_gpt":0.2825892131731555,"score_spread":0.264931035125986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141753982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91566145,0.033372864,0.034474835,0.001075955,0.00070517306,0.00029728602,0.0014696971,0.0013909134,0.011551952],"genre_scores_gemma":[0.976187,0.007078373,0.00900173,0.00020354349,0.00028602307,0.00011276332,0.00081730785,0.00006909656,0.0062442594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997911,0.0000402376,0.00001883761,0.000043430653,0.00006706168,0.000039273313],"domain_scores_gemma":[0.9998105,0.000033403103,0.000050037805,0.000025075073,0.00003639915,0.000044563072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018764134,0.0007976742,0.00042415498,0.00020772479,0.00020388291,0.0004653009,0.00019959625,0.00025768363,0.0022690736],"category_scores_gemma":[0.00012773006,0.00018270723,0.00033192828,0.0001149096,0.000287971,0.00033676863,0.0002539113,0.0007362282,0.0013580505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025267678,0.000037944174,0.0007449644,0.000123504,0.000008577358,0.0002763499,0.000023103892,0.000031777035,0.9903453,0.000168541,0.00015232452,0.007834947],"study_design_scores_gemma":[0.00008769727,0.00065932603,0.012179405,0.000036707886,0.00008100445,0.0027122023,0.0000964476,0.0012074129,0.9645654,0.00040060285,0.017957041,0.000016729515],"about_ca_topic_score_codex":0.00011358282,"about_ca_topic_score_gemma":0.00014714077,"teacher_disagreement_score":0.0022690736,"about_ca_system_score_codex":0.0002644541,"about_ca_system_score_gemma":0.00022870503,"threshold_uncertainty_score":0.0075907707},"labels":[],"label_agreement":null},{"id":"W2141774394","doi":"10.1159/000347132","title":"Damage-Associated Molecular Patterns Control Neutrophil Recruitment","year":2013,"lang":"en","type":"review","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":242,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Fondation pour la Recherche Médicale; Canadian Institutes of Health Research; Alberta Innovates; Alberta Innovates - Health Solutions","keywords":"Innate immune system; Neutrophil extracellular traps; Inflammation; Cell biology; Damp; Biology; Inflammatory response; Immune system; Extracellular; Immunology","score_opus":0.05686916729478553,"score_gpt":0.3209535159684124,"score_spread":0.26408434867362685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141774394","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00066094974,0.99648523,0.0004042849,0.00021078052,0.00023842983,0.00000864966,0.000026527445,0.000015627762,0.0019495193],"genre_scores_gemma":[0.0037712944,0.9940783,0.00035594925,0.000121413585,0.00014945354,0.000013361501,0.000042080916,0.0000023119246,0.0014657933],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998678,0.000017095736,0.000017403618,0.000025569538,0.000052769778,0.000019284598],"domain_scores_gemma":[0.9999095,0.000019535933,0.00002157989,0.0000034271902,0.00003110905,0.000014841858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019283898,0.00059714576,0.00080857007,0.0009903776,0.00019629847,0.00081112667,0.0006314757,0.0008699959,0.002093954],"category_scores_gemma":[0.0002927118,0.00016931645,0.00024560493,0.00083969557,0.00037490478,0.000836814,0.00051185157,0.00082795805,0.0022046596],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112060094,0.00006246412,0.00039448575,0.011065589,0.000042300857,0.00040157404,0.00010756404,0.0005037484,0.033453114,0.00695508,0.01580673,0.93109536],"study_design_scores_gemma":[0.00001712585,0.00016532614,0.003417279,0.0018054,0.000047355166,0.0026748886,0.0001259557,0.00016833274,0.009513362,0.003832593,0.97820514,0.000027178125],"about_ca_topic_score_codex":0.000404591,"about_ca_topic_score_gemma":0.0004978518,"teacher_disagreement_score":0.002093954,"about_ca_system_score_codex":0.00047060163,"about_ca_system_score_gemma":0.00055408577,"threshold_uncertainty_score":0.0070049167},"labels":[],"label_agreement":null},{"id":"W2141801137","doi":"10.1128/iai.00286-06","title":"Toll-Like Receptors Differentially Regulate CC and CXC Chemokines in Skeletal Muscle via NF-κB and Calcineurin","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada); McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé","keywords":"Biology; Chemokine; TLR4; TLR2; Calcineurin; Pyrrolidine dithiocarbamate; Innate immune system; Cell biology; CXCL10; TLR5; Toll-like receptor; Receptor; Signal transduction; Immunology; Inflammation; Internal medicine; NF-κB; Biochemistry; Transplantation; Medicine","score_opus":0.005056735366836845,"score_gpt":0.2069740216201827,"score_spread":0.20191728625334585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141801137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98149544,0.010832695,0.0041372143,0.00019349866,0.0000768204,0.00006159638,0.00045306902,0.00006377715,0.0026858205],"genre_scores_gemma":[0.98940814,0.0031497418,0.003108153,0.0001344562,0.000040074858,0.00011229287,0.0004580918,0.000013980773,0.0035751343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997186,0.000054926048,0.000041068368,0.000056895133,0.000060466096,0.00006801019],"domain_scores_gemma":[0.99984205,0.00001994819,0.000058279114,0.000016977343,0.000025558786,0.000037244212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025939234,0.00037946377,0.00018761828,0.00024489246,0.00018257888,0.00031514533,0.00015713707,0.00027079755,0.0016550024],"category_scores_gemma":[0.00018276891,0.0001444107,0.00040164852,0.00015315528,0.00027632748,0.0003034614,0.00024147143,0.00032327682,0.00036415533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010392906,0.000010988245,0.00025851434,0.000052398696,0.000004278172,0.000042595166,0.0000119312,0.00001436742,0.99871874,0.0000575407,0.000017087852,0.00070770225],"study_design_scores_gemma":[0.00006806783,0.0005926771,0.051904116,0.00004208931,0.000060833343,0.0008137281,0.00014457727,0.0008335579,0.9411978,0.0001877738,0.00413956,0.000015157671],"about_ca_topic_score_codex":0.0004093891,"about_ca_topic_score_gemma":0.0006260665,"teacher_disagreement_score":0.0016550024,"about_ca_system_score_codex":0.00022925608,"about_ca_system_score_gemma":0.00021827348,"threshold_uncertainty_score":0.0055365562},"labels":[],"label_agreement":null},{"id":"W2141831260","doi":"10.1111/j.1365-2249.2004.02513.x","title":"Disruption of MAP kinase activation and nuclear factor binding to the IL-12 p40 promoter in HIV-infected myeloid cells","year":2004,"lang":"en","type":"article","venue":"Clinical & Experimental Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network","keywords":"Transcription factor; Biology; p38 mitogen-activated protein kinases; Phosphorylation; Kinase; Molecular biology; Binding site; Promoter; Cytokine; Myeloid; MAPK/ERK pathway; Cell biology; Immunology; Gene expression; Gene; Genetics","score_opus":0.02395046777933318,"score_gpt":0.310882461741403,"score_spread":0.2869319939620698,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2141831260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994426,0.0010207222,0.003718906,0.00004422225,0.000015037443,0.000024943978,0.0002552335,0.000046062738,0.00044897536],"genre_scores_gemma":[0.99283254,0.0007106756,0.0045561898,0.000026425974,0.000006105743,0.00005568817,0.0005951163,0.000015106312,0.0012020922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999824,0.000032357653,0.000018614499,0.00002703367,0.000057313515,0.000040739156],"domain_scores_gemma":[0.99987435,0.000027749882,0.000039764735,0.000021969305,0.00001032112,0.000025767818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012177031,0.00027322784,0.00015735418,0.00016262208,0.00019859013,0.00029135143,0.00020803281,0.00019637523,0.00091973465],"category_scores_gemma":[0.00015269057,0.0002064896,0.00019711998,0.00017334288,0.00026877713,0.0001274624,0.00017790147,0.000582297,0.00034488938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039676892,0.000011173104,0.00007293899,0.000013262177,0.000001353759,0.000025621188,0.000010549608,0.00003099546,0.9994197,0.000056472913,0.0000047981284,0.0003135827],"study_design_scores_gemma":[0.00001052784,0.00014768814,0.0029073053,0.000006662101,0.0000059072268,0.00029987143,0.000029010193,0.00070532365,0.994693,0.00006277613,0.0011284592,0.0000034431584],"about_ca_topic_score_codex":0.00060445094,"about_ca_topic_score_gemma":0.00075531745,"teacher_disagreement_score":0.00091973465,"about_ca_system_score_codex":0.00030256525,"about_ca_system_score_gemma":0.00023976272,"threshold_uncertainty_score":0.0030767918},"labels":[],"label_agreement":null},{"id":"W2142604167","doi":"10.1177/1753425909104782","title":"Endotoxin-induced translocation of interleukin-6 from lungs to the systemic circulation","year":2009,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Michael Smith Health Research BC; British Columbia Lung Association; AstraZeneca","keywords":"Medicine; Dexamethasone; Interquartile range; Venous blood; Systemic inflammation; Lung; Cytokine; Internal medicine; Inflammation; Immunology; Endocrinology","score_opus":0.014591971105480293,"score_gpt":0.24449688700329963,"score_spread":0.22990491589781933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142604167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992896,0.0024394367,0.0034741838,0.00012856675,0.000057305693,0.000026378058,0.00022255542,0.00006269693,0.00069288665],"genre_scores_gemma":[0.9929069,0.0013443665,0.0039514373,0.00012958852,0.00004654175,0.00004658798,0.00032533376,0.00001407892,0.0012352848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997155,0.00006178611,0.000019474575,0.00005873213,0.00007945215,0.00006503224],"domain_scores_gemma":[0.99979395,0.000033790297,0.00008063942,0.000024550725,0.000018178656,0.00004880167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002556118,0.00028958326,0.00033914525,0.00016355139,0.0000810939,0.00040843466,0.00011455162,0.00023093788,0.0012300484],"category_scores_gemma":[0.00018466443,0.00016558723,0.00021980159,0.000106855565,0.000401926,0.00028923724,0.00028897042,0.0011412901,0.00034693428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000311503,0.00003157593,0.00042265237,0.000035925295,0.0000029139655,0.000043255026,0.000014052818,0.000029090359,0.9977633,0.000037543432,0.000022860368,0.0012853618],"study_design_scores_gemma":[0.000109141416,0.0038788668,0.032476023,0.000024926945,0.00002835172,0.00093416387,0.00010110877,0.0013076514,0.9593919,0.00018158872,0.0015566956,0.000009620115],"about_ca_topic_score_codex":0.00015156638,"about_ca_topic_score_gemma":0.00024789898,"teacher_disagreement_score":0.0012300484,"about_ca_system_score_codex":0.00017303259,"about_ca_system_score_gemma":0.00020513164,"threshold_uncertainty_score":0.0041149855},"labels":[],"label_agreement":null},{"id":"W2142769339","doi":"10.4049/jimmunol.1200776","title":"Sialoadhesin Promotes Rapid Proinflammatory and Type I IFN Responses to a Sialylated Pathogen, <i>Campylobacter jejuni</i>","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Wellcome Trust; University of Dundee","keywords":"Campylobacter jejuni; Proinflammatory cytokine; Microbiology; Pathogen; Biology; Immunology; Virology; Bacteria; Inflammation","score_opus":0.01237162200034887,"score_gpt":0.23217964484659373,"score_spread":0.21980802284624487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142769339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982064,0.0005618767,0.00035033585,0.00006679154,0.000032656135,0.00001947372,0.00013975958,0.000041625317,0.0005810709],"genre_scores_gemma":[0.9971969,0.00036873398,0.00072521216,0.000084233056,0.000015800319,0.00003301887,0.00030734486,0.000012146906,0.0012565731],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999851,0.000022689037,0.000016218062,0.000025470054,0.000023554783,0.000060979277],"domain_scores_gemma":[0.99987936,0.000016305401,0.000030770014,0.000009397453,0.000011003292,0.00005322253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016913604,0.00042450894,0.00028133634,0.00012537075,0.00009501967,0.00019797927,0.0001320494,0.00027205292,0.00075793004],"category_scores_gemma":[0.00013269467,0.0001437433,0.0002946752,0.000064727734,0.0002057844,0.00015427185,0.00016744345,0.00068589195,0.0001901071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007733885,0.000074045114,0.0002465759,0.000040101862,0.000003668494,0.000051110204,0.000015084996,0.000043428652,0.99791044,0.000019416773,0.00003647676,0.000786235],"study_design_scores_gemma":[0.00007136743,0.0026701554,0.009373669,0.000014458205,0.000017923789,0.00019709127,0.00007435179,0.00067972013,0.98567134,0.00003615646,0.0011877626,0.0000060347147],"about_ca_topic_score_codex":0.0005731674,"about_ca_topic_score_gemma":0.0008992108,"teacher_disagreement_score":0.00075793004,"about_ca_system_score_codex":0.00024074315,"about_ca_system_score_gemma":0.0002326511,"threshold_uncertainty_score":0.002535522},"labels":[],"label_agreement":null},{"id":"W2142865224","doi":"10.1165/rcmb.2010-0450oc","title":"Steroid-Insensitive ERK1/2 Activity Drives CXCL8 Synthesis and Neutrophilia by Airway Smooth Muscle","year":2011,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Christie (Canada)","funders":"","keywords":"Neutrophilia; Interleukin 8; Airway; Medicine; Internal medicine; Cardiology; Chemistry; Inflammation; Anesthesia","score_opus":0.0071639300547167,"score_gpt":0.213496968354143,"score_spread":0.2063330382994263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2142865224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99570763,0.0014298524,0.0011455218,0.00014544617,0.00004327093,0.000024577772,0.00033264872,0.000033501787,0.0011374573],"genre_scores_gemma":[0.9953667,0.0007577944,0.00089389645,0.000078393736,0.000017818336,0.00003564607,0.0005107182,0.000007716809,0.00233125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998565,0.000024778596,0.000010850288,0.000027634955,0.00003067555,0.000049588132],"domain_scores_gemma":[0.9999449,0.000007693293,0.000016037106,0.000008042566,0.000005813586,0.000017365168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000114199785,0.00023966949,0.00016755414,0.000095787866,0.000117061245,0.0002096253,0.00012218181,0.0001588848,0.0018615066],"category_scores_gemma":[0.00007693805,0.00013559511,0.00026618713,0.0000801638,0.00016562639,0.00014215127,0.00017911625,0.00051397807,0.0003720231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008999019,0.000028132612,0.00012090649,0.00003751024,0.0000023545601,0.000027715956,0.0000072916773,0.000019572883,0.9990415,0.00004272054,0.000034899425,0.0005474133],"study_design_scores_gemma":[0.00005548209,0.0006167015,0.022029176,0.000014101776,0.000013019766,0.0005365799,0.00008728667,0.0018121033,0.97097605,0.00013044207,0.003722044,0.0000071061113],"about_ca_topic_score_codex":0.00032175294,"about_ca_topic_score_gemma":0.0006253532,"teacher_disagreement_score":0.0018615066,"about_ca_system_score_codex":0.00014525202,"about_ca_system_score_gemma":0.00017162472,"threshold_uncertainty_score":0.006227374},"labels":[],"label_agreement":null},{"id":"W2143180162","doi":"10.1034/j.1399-3003.2000.15e18.x","title":"The response of human bone marrow to chronic cigarette smoking","year":2000,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":163,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Human bone; Bone marrow; Medicine; Cigarette smoking; Environmental health; Internal medicine; Biology","score_opus":0.01522945446208725,"score_gpt":0.24859708440497066,"score_spread":0.2333676299428834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143180162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99734336,0.0017900402,0.00024295296,0.000025311858,0.000006787044,0.0000147491755,0.00010000785,0.000006776993,0.00046994287],"genre_scores_gemma":[0.9984049,0.00061076204,0.00013284331,0.000055130833,0.0000102727945,0.000019554162,0.00023094322,0.0000022136614,0.0005333737],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998066,0.00004811712,0.000010607636,0.000044270786,0.00005796355,0.000032470725],"domain_scores_gemma":[0.9998567,0.000028077406,0.000038265396,0.000013079889,0.000032603053,0.000031162966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019907016,0.00016817903,0.00018393832,0.00023285527,0.00010151631,0.00025400717,0.00009949721,0.00023623466,0.0015189246],"category_scores_gemma":[0.00040318587,0.0000980317,0.00009333568,0.00012019675,0.00016457605,0.00007135775,0.0002321749,0.00018171551,0.00028757425],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021180788,0.00009655308,0.12758455,0.00008581403,0.000060448398,0.0004043076,0.00032247862,0.00008853273,0.8535632,0.000056465244,0.00015319904,0.015466426],"study_design_scores_gemma":[0.00007533737,0.002865487,0.89438486,0.000023737106,0.000078090685,0.0021378715,0.0003667019,0.0004355598,0.097047634,0.00012738783,0.0024478124,0.000009456369],"about_ca_topic_score_codex":0.0008139442,"about_ca_topic_score_gemma":0.00059775,"teacher_disagreement_score":0.0015189246,"about_ca_system_score_codex":0.00011400394,"about_ca_system_score_gemma":0.000094833835,"threshold_uncertainty_score":0.0050813556},"labels":[],"label_agreement":null},{"id":"W2143541969","doi":"10.1186/1746-6148-2-34","title":"Characterization of ovine hepatic gene expression profiles in response to Escherichia coli lipopolysaccharide using a bovine cDNA microarray","year":2006,"lang":"en","type":"article","venue":"BMC Veterinary Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Microarray; Complementary DNA; Escherichia coli; Gene expression; Gene; Microarray analysis techniques; Lipopolysaccharide; Gene expression profiling; Molecular biology; Real-time polymerase chain reaction; Housekeeping gene; Immunology; Genetics","score_opus":0.060015796894433995,"score_gpt":0.3317550541150793,"score_spread":0.2717392572206453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143541969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9705549,0.0031357703,0.017495202,0.00020705245,0.00005134863,0.00009982864,0.0067088674,0.00013590996,0.0016110613],"genre_scores_gemma":[0.9277302,0.0037053754,0.045003045,0.00040506822,0.00006085746,0.0004612025,0.01584304,0.00009022147,0.0067010275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975115,0.000022362668,0.000017264914,0.00010394833,0.0000672135,0.000038006026],"domain_scores_gemma":[0.9997261,0.00008690442,0.00007559321,0.00001728913,0.00006919433,0.000024884339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020190678,0.00029067558,0.00044278248,0.0005286414,0.00024087976,0.00043898236,0.00013577676,0.00036336467,0.00092748256],"category_scores_gemma":[0.0002513351,0.00017163012,0.0002661389,0.0005892911,0.00019644394,0.00016571266,0.00013026873,0.00036766962,0.00043396276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009121096,0.00000895823,0.0009368348,0.000054646236,0.0000038273392,0.00002266989,0.00002767264,0.000055383374,0.9976133,0.0000089948435,0.000023512828,0.0011530168],"study_design_scores_gemma":[0.000025690848,0.0009529591,0.23789996,0.000055106353,0.0001447286,0.00088008534,0.0004481525,0.003985955,0.74593186,0.00009315525,0.009547098,0.000035216643],"about_ca_topic_score_codex":0.0012575322,"about_ca_topic_score_gemma":0.0019514303,"teacher_disagreement_score":0.0012575322,"about_ca_system_score_codex":0.0002915326,"about_ca_system_score_gemma":0.00017547516,"threshold_uncertainty_score":0.0031027198},"labels":[],"label_agreement":null},{"id":"W2143760680","doi":"10.1093/infdis/jis505","title":"Differential Roles of MyD88 and TRIF in Hematopoietic and Resident Cells During Murine Gram-Negative Pneumonia","year":2012,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TRIF; Pneumonia; Signal transducing adaptor protein; Haematopoiesis; Immunology; Biology; Innate immune system; Pathogen; Immune system; Toll-like receptor; Myeloid; Signal transduction; Microbiology; Medicine; Cell biology; Stem cell; Internal medicine","score_opus":0.0038576721533525177,"score_gpt":0.20947160590263492,"score_spread":0.20561393374928238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143760680","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99625754,0.0017345038,0.0010801723,0.000038036454,0.000011676071,0.0000344877,0.00022075759,0.000031695232,0.00059115107],"genre_scores_gemma":[0.9958656,0.0006139045,0.001958259,0.000055669505,0.000010784979,0.0000943973,0.00033515968,0.000014627088,0.0010517618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999602,0.00007804904,0.000039164384,0.00006658649,0.00008867391,0.00012547146],"domain_scores_gemma":[0.9997359,0.00002462837,0.0000842559,0.000026444874,0.000025127492,0.00010358673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003876701,0.00038183082,0.00028224228,0.00043744658,0.00017970575,0.00025138923,0.00028000106,0.0004879866,0.0007425213],"category_scores_gemma":[0.00018654496,0.00025654837,0.00022586274,0.00013011417,0.00034983773,0.00031500205,0.00033794832,0.00073701126,0.00038463093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008153921,0.000057810415,0.0009062258,0.000054500193,0.000003092756,0.00011005489,0.00004204819,0.00003380594,0.99660337,0.00015936946,0.000024663235,0.0011897581],"study_design_scores_gemma":[0.00013267602,0.0020768882,0.033495996,0.000037496728,0.000060846825,0.0014521559,0.00017465233,0.00080715964,0.95971775,0.00017451282,0.0018575942,0.000012209564],"about_ca_topic_score_codex":0.00015193984,"about_ca_topic_score_gemma":0.00025511876,"teacher_disagreement_score":0.0007425213,"about_ca_system_score_codex":0.00030924127,"about_ca_system_score_gemma":0.00021863673,"threshold_uncertainty_score":0.002483964},"labels":[],"label_agreement":null},{"id":"W2143922165","doi":"10.1183/09031936.00076510","title":"Host defence during<i>Klebsiella</i>pneumonia relies on haematopoietic-expressed Toll-like receptors 4 and 2","year":2010,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Universiteit van Amsterdam","keywords":"TLR2; Haematopoiesis; Klebsiella pneumoniae; Biology; Klebsiella pneumonia; TLR4; Microbiology; Spleen; Toll-like receptor; Immunology; Innate immune system; Bacterial pneumonia; Pneumonia; Immune system; Staphylococcus aureus; Bacteria; Antibiotics; Medicine; Escherichia coli; Gene; Stem cell; Cell biology; Internal medicine","score_opus":0.008714813739450385,"score_gpt":0.21272701618357653,"score_spread":0.20401220244412616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2143922165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99108326,0.0035401857,0.003258479,0.00011296353,0.000032931996,0.00004147856,0.00023654844,0.00009047422,0.0016037175],"genre_scores_gemma":[0.99393386,0.0013311703,0.002189254,0.00008694181,0.000023547575,0.000059782677,0.00034480102,0.000015215264,0.0020153609],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972254,0.00006151995,0.00002664194,0.000059491318,0.000043236305,0.00008642178],"domain_scores_gemma":[0.9998116,0.000016862712,0.0001004208,0.000015936454,0.000020472084,0.000034623936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002454076,0.00043605914,0.00031012227,0.00024890172,0.00016471499,0.00044621603,0.00022929827,0.0004983057,0.0017654031],"category_scores_gemma":[0.00014768024,0.00015916971,0.00028275966,0.000116714604,0.0004258172,0.00044504658,0.00042996215,0.0005317121,0.00048133486],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035586505,0.00001892686,0.0009166058,0.00008386678,0.0000037806924,0.00011701801,0.000022368962,0.000027264296,0.9973048,0.00007707631,0.000024233297,0.0010481158],"study_design_scores_gemma":[0.00004720297,0.0017009374,0.06744912,0.00004766211,0.000061327664,0.0020082914,0.0002714078,0.00064952736,0.92284554,0.0002437231,0.004652979,0.000022277063],"about_ca_topic_score_codex":0.00014544938,"about_ca_topic_score_gemma":0.00018634372,"teacher_disagreement_score":0.0017654031,"about_ca_system_score_codex":0.0002225797,"about_ca_system_score_gemma":0.00019439361,"threshold_uncertainty_score":0.0059058666},"labels":[],"label_agreement":null},{"id":"W2144308207","doi":"10.4049/jimmunol.180.11.7134","title":"TLR Ligand-Induced Type I IFNs Affect Thymopoiesis","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Saint-Luc; Sunnybrook Health Science Centre; Université de Montréal; Sunnybrook Hospital; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"TLR3; TLR7; Biology; Immune system; Acquired immune system; Regulator; Vesicular stomatitis virus; Immunology; Thymocyte; Cell biology; TLR9; Immunity; Innate immune system; T cell; Virus; Toll-like receptor; Gene expression; Gene; Genetics","score_opus":0.020166087946043708,"score_gpt":0.24441680402980379,"score_spread":0.22425071608376007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144308207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924521,0.0039919503,0.0011472218,0.00007819833,0.000050897288,0.000018588546,0.00031436092,0.000041245014,0.0019054349],"genre_scores_gemma":[0.99503314,0.0014342275,0.0011514181,0.00006871678,0.000023991706,0.000025304287,0.00031267476,0.000013807624,0.0019368009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998467,0.000043649616,0.00001443186,0.000022034752,0.000026950414,0.00004621028],"domain_scores_gemma":[0.99984026,0.0000669396,0.00003245114,0.00001626482,0.000013913551,0.00003014823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013622624,0.0003028322,0.00020004628,0.0001419075,0.00009759937,0.00023685332,0.00011530704,0.0002784615,0.0015323536],"category_scores_gemma":[0.00018366125,0.00008169239,0.00018266228,0.00006656718,0.00016863186,0.000118635944,0.00014866104,0.00045896453,0.00035589788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024090146,0.000021678421,0.00027419033,0.000035807625,0.000002387488,0.000049682967,0.000012169472,0.000040235256,0.99747014,0.00003561126,0.000020983054,0.0017962029],"study_design_scores_gemma":[0.000019637988,0.00032771926,0.0029297825,0.000007263638,0.000013520116,0.00013307213,0.000024547697,0.00025098393,0.9948184,0.000044856864,0.001427934,0.000002167334],"about_ca_topic_score_codex":0.0001725018,"about_ca_topic_score_gemma":0.00027330834,"teacher_disagreement_score":0.0015323536,"about_ca_system_score_codex":0.00016475584,"about_ca_system_score_gemma":0.00013272719,"threshold_uncertainty_score":0.005126238},"labels":[],"label_agreement":null},{"id":"W2144318479","doi":"10.4049/jimmunol.169.10.5660","title":"Differential Regulation of CD44 Expression by Lipopolysaccharide (LPS) and TNF-α in Human Monocytic Cells: Distinct Involvement of c-Jun N-Terminal Kinase in LPS-Induced CD44 Expression","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; University of British Columbia; Children's Hospital of Eastern Ontario; Vancouver Hospital and Health Sciences Centre; University of British Columbia Hospital; University of Ottawa","funders":"Ontario HIV Treatment Network; Natural Sciences and Engineering Research Council of Canada; Medical Research Council Canada; Cancer Research Society; Medical Research Council; University of Ottawa","keywords":"Lipopolysaccharide; Terminal (telecommunication); Cell biology; CD44; Tumor necrosis factor alpha; Kinase; Expression (computer science); THP1 cell line; Chemistry; Molecular biology; Biology; Immunology; Cell culture; Cell; Biochemistry; Computer science; Telecommunications; Genetics","score_opus":0.017087915870123215,"score_gpt":0.23691252850801195,"score_spread":0.21982461263788874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144318479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99555016,0.0015386805,0.0017964003,0.000057915608,0.000021395002,0.000033028853,0.00027709157,0.000014113775,0.00071140775],"genre_scores_gemma":[0.9917121,0.0019340266,0.0039143073,0.000056236164,0.000017894097,0.00008826409,0.0006029766,0.0000062088125,0.0016681401],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998173,0.00003134313,0.00001723827,0.00002224732,0.000055144523,0.000056607827],"domain_scores_gemma":[0.99992037,0.000011620684,0.000017122515,0.000009269235,0.000019438281,0.000022173654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013070597,0.00020887514,0.00017946465,0.00022978082,0.00018659049,0.00031462,0.00005842265,0.00017606122,0.0007956916],"category_scores_gemma":[0.00012316652,0.00015585836,0.00024020504,0.00023674108,0.00014469493,0.00017505618,0.00013481281,0.00029484608,0.00032315633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001557847,0.00001581472,0.00031328906,0.000027905016,0.0000019366798,0.000048581795,0.000026672165,0.000013390111,0.9987895,0.000034922115,0.000010032604,0.0005622344],"study_design_scores_gemma":[0.000041575888,0.00049762975,0.037278347,0.00001556714,0.00002741721,0.000556014,0.00013218888,0.0010392574,0.95797753,0.00007398059,0.0023508912,0.000009612714],"about_ca_topic_score_codex":0.00051869836,"about_ca_topic_score_gemma":0.000683819,"teacher_disagreement_score":0.0007956916,"about_ca_system_score_codex":0.00021582078,"about_ca_system_score_gemma":0.00022488418,"threshold_uncertainty_score":0.0026618838},"labels":[],"label_agreement":null},{"id":"W2144819671","doi":"10.1128/iai.02832-14","title":"Uncoupling of Pro- and Anti-Inflammatory Properties of Staphylococcus aureus","year":2015,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Centre Hospitalier de l’Université de Montréal; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Proinflammatory cytokine; TLR2; Staphylococcus aureus; Biology; Microbiology; Population; Phagocytosis; Protein kinase B; PI3K/AKT/mTOR pathway; Immunology; TLR4; Signal transduction; Inflammation; Cell biology; Bacteria; Medicine","score_opus":0.030095728209729677,"score_gpt":0.23936159628519846,"score_spread":0.2092658680754688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144819671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954169,0.001974254,0.0015923325,0.00005164139,0.000016928789,0.000013770045,0.00012409184,0.00002657784,0.0007833995],"genre_scores_gemma":[0.9969663,0.0006813339,0.0015528412,0.000046720088,0.000011191486,0.000014442653,0.00022774079,0.000008737935,0.00049078005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997991,0.000051303916,0.000020751439,0.000022051698,0.00005808729,0.00004880518],"domain_scores_gemma":[0.9997943,0.000042537547,0.000056048128,0.000031609743,0.000034928322,0.000040636518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015437338,0.00031447245,0.0002158679,0.00024407778,0.00009063915,0.00020832122,0.000115441806,0.0001484882,0.0006248269],"category_scores_gemma":[0.00021295536,0.00009422673,0.00020879885,0.0001270508,0.00018047659,0.0001915425,0.00030179546,0.0003678758,0.00014470499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013847806,0.000014035492,0.0001910228,0.00002803023,0.0000027339722,0.000028727503,0.000004398318,0.000027469496,0.99842334,0.000032966473,0.000010717049,0.0010981329],"study_design_scores_gemma":[0.000014309615,0.00059006934,0.016475901,0.000008633741,0.000013472799,0.00030277876,0.000026129488,0.00054135546,0.9811413,0.0000776453,0.00080421503,0.0000042568736],"about_ca_topic_score_codex":0.00021535928,"about_ca_topic_score_gemma":0.0004708217,"teacher_disagreement_score":0.0006248269,"about_ca_system_score_codex":0.00011946362,"about_ca_system_score_gemma":0.00019883152,"threshold_uncertainty_score":0.0020902753},"labels":[],"label_agreement":null},{"id":"W2144829794","doi":"10.1189/jlb.0509359","title":"Macrophages from BALB/c and CBA/Ca mice differ in their cellular responses to <i>Streptococcus pneumoniae</i>","year":2009,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biology; Streptococcus pneumoniae; Microbiology; Pathogen; Secretion; Immune system; Immunology; Macrophage; Pneumococcal infections; Antibiotics; In vitro; Genetics","score_opus":0.008819011282555172,"score_gpt":0.23993856877192396,"score_spread":0.2311195574893688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144829794","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98486865,0.0018209942,0.002666316,0.0008676427,0.00020825618,0.0001946526,0.0058973096,0.00021284178,0.0032633326],"genre_scores_gemma":[0.9739005,0.0013158391,0.007233721,0.0007708724,0.00010442637,0.0007280871,0.006941085,0.00024025912,0.008765384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990107,0.00012478727,0.00020243636,0.00018656695,0.0002059921,0.00026939966],"domain_scores_gemma":[0.9990938,0.000096863274,0.00024323385,0.00014395511,0.000089080386,0.00033317955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006225274,0.0011679145,0.0005830856,0.0020648697,0.0007718701,0.00095707097,0.0008195255,0.0011824218,0.006156635],"category_scores_gemma":[0.00045554078,0.00059222546,0.0007584651,0.0005389374,0.0008980634,0.0006360727,0.00062594115,0.002497507,0.0025661367],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011880298,0.00020243422,0.0005187448,0.000061999745,0.000014035299,0.00008953645,0.000054061104,0.00002715466,0.99687684,0.00021065754,0.00011665477,0.00063988235],"study_design_scores_gemma":[0.0005285011,0.0014293623,0.03859726,0.00008154461,0.00014036617,0.0019014603,0.00032862264,0.00068345654,0.94903094,0.00039479605,0.006823111,0.00006056837],"about_ca_topic_score_codex":0.0027310955,"about_ca_topic_score_gemma":0.0029620824,"teacher_disagreement_score":0.006156635,"about_ca_system_score_codex":0.0006366671,"about_ca_system_score_gemma":0.0004391253,"threshold_uncertainty_score":0.020595968},"labels":[],"label_agreement":null},{"id":"W2145256807","doi":"10.1152/ajpgi.2001.280.4.g755","title":"Colonic production and expression of IL-4, IL-6, and IL-10 in neonatal suckling rats after LPS challenge","year":2001,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Lipopolysaccharide; Cytokine; Internal medicine; Interleukin; Endocrinology; Inflammation; Proinflammatory cytokine; Interleukin 10; Medicine; Immunology; Biology","score_opus":0.00659905221774403,"score_gpt":0.21302575059779189,"score_spread":0.20642669838004785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145256807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986418,0.0005104917,0.00029779886,0.000027572023,0.000010232127,0.000008390655,0.00019540299,0.000022808055,0.00028543576],"genre_scores_gemma":[0.994476,0.00093326095,0.001490611,0.00007534978,0.000011723785,0.00005996767,0.0005999562,0.00002178434,0.0023314734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987614,0.000011677427,0.000013084586,0.000036004494,0.000030532174,0.000032578453],"domain_scores_gemma":[0.99944574,0.000057220463,0.00018154699,0.000035839937,0.000057148474,0.00022244325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012115575,0.00037673357,0.00032481313,0.0004370156,0.000121484525,0.0002473786,0.00012130303,0.0002558193,0.0014677255],"category_scores_gemma":[0.00027351792,0.00019905005,0.00017481066,0.00015407603,0.00033362495,0.0002955381,0.00016855421,0.00076086196,0.0002448675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004193433,0.000042913547,0.0014938969,0.000035346813,0.0000036327651,0.00014011303,0.00005083625,0.00001800751,0.99695396,0.000013836284,0.000012011911,0.0008160209],"study_design_scores_gemma":[0.000047292047,0.004248476,0.16299795,0.000033258915,0.000052194337,0.0010326264,0.00057566003,0.00040924462,0.8294262,0.000069931986,0.0010833567,0.000023835131],"about_ca_topic_score_codex":0.0005978967,"about_ca_topic_score_gemma":0.00096524117,"teacher_disagreement_score":0.0014677255,"about_ca_system_score_codex":0.00024361718,"about_ca_system_score_gemma":0.00021436735,"threshold_uncertainty_score":0.004910052},"labels":[],"label_agreement":null},{"id":"W2145427795","doi":"10.1016/j.cellimm.2011.05.016","title":"B-cell activating factor (BAFF) promotes CpG ODN-induced B cell activation and proliferation","year":2011,"lang":"en","type":"article","venue":"Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"","keywords":"TLR9; B-cell activating factor; Biology; B cell; CpG Oligodeoxynucleotide; CD40; Cell biology; Cytokine; Naive B cell; IL-2 receptor; Polyclonal B cell response; Molecular biology; Immunology; T cell; Antigen-presenting cell; B-cell receptor; Antibody; Immune system; Cytotoxic T cell; DNA methylation; In vitro","score_opus":0.02468936586043957,"score_gpt":0.20538947883613476,"score_spread":0.1807001129756952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145427795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9881798,0.0028633,0.0030643074,0.00018567141,0.00013416357,0.00007632448,0.0003594905,0.00016862566,0.004968323],"genre_scores_gemma":[0.99057126,0.001088735,0.0030611928,0.00010468105,0.000090986985,0.00009851408,0.0007077203,0.000041631738,0.0042352304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945396,0.00015746137,0.00003737985,0.000046881487,0.00010692664,0.00019743886],"domain_scores_gemma":[0.9996828,0.00010926834,0.000032779408,0.000037009322,0.000033088178,0.00010499598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005212163,0.00067014387,0.0003217723,0.0009470446,0.00034908,0.00048540076,0.00024684283,0.00044963698,0.003958072],"category_scores_gemma":[0.0002956156,0.00023155434,0.00050343346,0.00029898487,0.00027407787,0.00032674716,0.0005430223,0.001626745,0.0011751591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000784257,0.0001690548,0.00022084867,0.000056792185,0.0000074785708,0.00006532098,0.000021755486,0.000056779732,0.9955894,0.00012756824,0.00010666546,0.0027940795],"study_design_scores_gemma":[0.00009199222,0.00044772043,0.004463743,0.000013254629,0.000020694368,0.000182877,0.00004615981,0.0007102193,0.9910712,0.00009641243,0.0028514836,0.0000042758143],"about_ca_topic_score_codex":0.0010202836,"about_ca_topic_score_gemma":0.0015580211,"teacher_disagreement_score":0.003958072,"about_ca_system_score_codex":0.0003561509,"about_ca_system_score_gemma":0.0003731174,"threshold_uncertainty_score":0.013241112},"labels":[],"label_agreement":null},{"id":"W2145588631","doi":"10.1189/jlb.0312125","title":"Length of dsRNA (poly I:C) drives distinct innate immune responses, depending on the cell type","year":2013,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Myeloid; Cytokine; Cell biology; Cell; Immune system; RNA silencing; Cell type; Molecular biology; Immunology; RNA; Biochemistry; RNA interference; Gene","score_opus":0.015676603489015267,"score_gpt":0.24486170072640784,"score_spread":0.22918509723739258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145588631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9757663,0.0050691115,0.0131097045,0.00014797953,0.000115715855,0.00008887901,0.00084670266,0.00013472173,0.0047210176],"genre_scores_gemma":[0.9844699,0.0021069997,0.008615916,0.00014286501,0.000033522952,0.00012567254,0.0009072781,0.00004034711,0.0035573428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997396,0.000052752952,0.000035192552,0.00007445299,0.000056318313,0.00004163339],"domain_scores_gemma":[0.9998241,0.00004677579,0.000060421058,0.000021935399,0.000020044074,0.000026808537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022169015,0.0004785536,0.0002183145,0.00022537637,0.0001113951,0.0004441733,0.00013619455,0.0003504386,0.0010957594],"category_scores_gemma":[0.00015311775,0.00011708647,0.0001919956,0.00017072361,0.00026081456,0.00022567548,0.00019869904,0.0006964068,0.00046664008],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036351947,0.000009159631,0.000055102006,0.000021950236,0.0000012827408,0.000008134494,0.000003174045,0.000020277432,0.99938,0.000029428655,0.000008666526,0.00042642155],"study_design_scores_gemma":[0.000007747036,0.000253155,0.0018122494,0.0000079391075,0.000011948612,0.00008175306,0.000018819026,0.00029827835,0.9961487,0.000029738634,0.0013249516,0.0000047046447],"about_ca_topic_score_codex":0.00011724311,"about_ca_topic_score_gemma":0.00019271327,"teacher_disagreement_score":0.0010957594,"about_ca_system_score_codex":0.00026328652,"about_ca_system_score_gemma":0.00014154072,"threshold_uncertainty_score":0.0036657453},"labels":[],"label_agreement":null},{"id":"W2145708021","doi":"10.4049/jimmunol.171.6.3119","title":"Toll-Like Receptor 4-Mediated Innate IL-10 Activates Antigen-Specific Regulatory T Cells and Confers Resistance to <i>Bordetella pertussis</i> by Inhibiting Inflammatory Pathology","year":2003,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":262,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Bordetella pertussis; TLR4; Immunology; Chemokine; Toll-like receptor; Cytokine; Biology; Innate immune system; Inflammation; Pertussis toxin; Cell biology; Immune system; Signal transduction; G protein","score_opus":0.0056517580715948566,"score_gpt":0.1940427342439803,"score_spread":0.18839097617238545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145708021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99467397,0.0011415144,0.0018297852,0.00015035678,0.000034413482,0.000018054337,0.00023772582,0.00016060947,0.0017535466],"genre_scores_gemma":[0.9941702,0.00075667957,0.001447862,0.00008742799,0.000017966135,0.000020893121,0.0003930414,0.00002465126,0.0030812009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982244,0.00003472153,0.000011403762,0.000027056682,0.00003245044,0.00007195052],"domain_scores_gemma":[0.99990857,0.000011170821,0.000030707823,0.000011897062,0.0000070688707,0.00003055347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121553945,0.0005500449,0.00032810908,0.00031516186,0.00012317908,0.00031363618,0.00021139118,0.00035953763,0.0014677073],"category_scores_gemma":[0.00008998559,0.00019289399,0.00022824234,0.00009075522,0.00031150552,0.00014181687,0.0001822863,0.0007736322,0.00053595804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010454493,0.000023824403,0.00016136385,0.000018268927,0.0000024437702,0.00003538155,0.0000033817203,0.000024282459,0.9990773,0.000028496732,0.000027528518,0.0004931343],"study_design_scores_gemma":[0.000033333956,0.00041769654,0.0072187325,0.000008135089,0.000019494471,0.0003956054,0.000022332219,0.00076841284,0.98939764,0.000059544232,0.0016548223,0.0000041788476],"about_ca_topic_score_codex":0.00047971477,"about_ca_topic_score_gemma":0.00072243944,"teacher_disagreement_score":0.0014677073,"about_ca_system_score_codex":0.00030357164,"about_ca_system_score_gemma":0.0002116693,"threshold_uncertainty_score":0.0049099326},"labels":[],"label_agreement":null},{"id":"W2145710202","doi":"10.1164/rccm.200808-1306oc","title":"Bacteria Challenge in Smoke-exposed Mice Exacerbates Inflammation and Skews the Inflammatory Profile","year":2009,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Medicine; Inflammation; Immunology; In vivo; Haemophilus influenzae; Lung; Ex vivo; Tumor necrosis factor alpha; Exacerbation; Pathogenesis; Mediator; Microbiology; Biology; Antibiotics; Internal medicine","score_opus":0.014564317250998427,"score_gpt":0.27417470930575216,"score_spread":0.2596103920547537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145710202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976566,0.0006956991,0.00064764085,0.00014928768,0.00003742375,0.00004279999,0.00018903684,0.000051846506,0.00052959344],"genre_scores_gemma":[0.9937581,0.0012707345,0.0018022497,0.00027461676,0.000052459633,0.0000988018,0.00044469148,0.000027130442,0.0022711905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996743,0.00005573637,0.000029575347,0.000059457707,0.000099792436,0.00008124317],"domain_scores_gemma":[0.9997291,0.000030632997,0.000092876406,0.000022423083,0.000017480976,0.00010750718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002528411,0.0007662741,0.0003518486,0.00048571388,0.00021537018,0.00041665952,0.00023459813,0.00066896016,0.0018851229],"category_scores_gemma":[0.0001325204,0.00029286728,0.00027528385,0.00015855773,0.00061314687,0.00025076492,0.00025564764,0.0013344352,0.00042775844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039665896,0.00018671431,0.0010360115,0.000039935978,0.0000052792743,0.000103693186,0.000022006334,0.000025562826,0.9973124,0.000043687593,0.000029030305,0.0007991184],"study_design_scores_gemma":[0.0001292048,0.005777476,0.04674948,0.000065305365,0.00007894101,0.0013007827,0.00018767607,0.0009583064,0.94296414,0.00015903483,0.0016110933,0.000018673829],"about_ca_topic_score_codex":0.00026978223,"about_ca_topic_score_gemma":0.0008598955,"teacher_disagreement_score":0.0018851229,"about_ca_system_score_codex":0.00030079123,"about_ca_system_score_gemma":0.00030147165,"threshold_uncertainty_score":0.00630635},"labels":[],"label_agreement":null},{"id":"W2145741165","doi":"10.1074/mcp.m113.033340","title":"Discovery of Novel Disease-specific and Membrane-associated Candidate Markers in a Mouse Model of Multiple Sclerosis","year":2013,"lang":"en","type":"article","venue":"Molecular & Cellular Proteomics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute","keywords":"Experimental autoimmune encephalomyelitis; Multiple sclerosis; Peripheral blood mononuclear cell; Proteomics; Immune system; Encephalomyelitis; Proteome; Biology; Demyelinating disease; Autoimmune disease; Immunology; Pathology; Antibody; Medicine; Bioinformatics; Biochemistry; In vitro","score_opus":0.016531997562080344,"score_gpt":0.18361124797204956,"score_spread":0.1670792504099692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2145741165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984835,0.0028289186,0.007483413,0.0002811171,0.000054718836,0.000075184464,0.0037056464,0.00028627616,0.00044978928],"genre_scores_gemma":[0.96336204,0.00485232,0.020005642,0.00027058274,0.00003683912,0.00029237138,0.008216772,0.00008650472,0.0028769397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973565,0.000023291399,0.00003073069,0.00007907336,0.00009059394,0.000040703442],"domain_scores_gemma":[0.99975115,0.000024734929,0.00009514078,0.000018725077,0.000038833616,0.00007148149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002913209,0.00061602966,0.0006794267,0.0010752457,0.00020013918,0.00047024916,0.00026865723,0.0005440105,0.00066169054],"category_scores_gemma":[0.00023903986,0.00020725137,0.0004582668,0.0007769009,0.0002568061,0.00027228362,0.0002137746,0.00090935704,0.00037953793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019069613,0.000046630103,0.0004841985,0.000051055442,0.00001985654,0.00007428353,0.000011135461,0.000065996974,0.99759454,0.000040721916,0.000062539526,0.0013583368],"study_design_scores_gemma":[0.00012249146,0.0020527057,0.051330328,0.00006928408,0.0002989074,0.0015808779,0.00009666805,0.0040590316,0.93188554,0.00028049242,0.008193021,0.00003061787],"about_ca_topic_score_codex":0.00037885056,"about_ca_topic_score_gemma":0.0007432137,"teacher_disagreement_score":0.0010752457,"about_ca_system_score_codex":0.00030624366,"about_ca_system_score_gemma":0.00027332111,"threshold_uncertainty_score":0.0022220016},"labels":[],"label_agreement":null},{"id":"W2146065571","doi":"10.4049/jimmunol.177.9.6540","title":"Human CD4+CD25+ Regulatory T Lymphocytes Inhibit Lipopolysaccharide-Induced Monocyte Survival through a Fas/Fas Ligand-Dependent Mechanism","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Christie (Canada)","funders":"Canadian Institutes of Health Research; Hospices Civils de Lyon","keywords":"Fas ligand; CD14; Monocyte; Immunology; Septic shock; Fas receptor; Apoptosis; Lipopolysaccharide; Biology; Cell biology; Cancer research; Immune system; Sepsis; Programmed cell death","score_opus":0.015908919547845894,"score_gpt":0.24282086296993136,"score_spread":0.22691194342208545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146065571","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98739594,0.005416575,0.0029522798,0.00015150878,0.00009892185,0.000103572274,0.00008172623,0.00015564862,0.0036438098],"genre_scores_gemma":[0.99359095,0.0016670907,0.0017476279,0.00017085049,0.00007254687,0.0000677012,0.00021535534,0.00001322933,0.0024547884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998265,0.000049260387,0.000010527664,0.000014252517,0.000033751297,0.00006584944],"domain_scores_gemma":[0.9998919,0.000032105396,0.000019014815,0.000017993218,0.000016428321,0.000022462136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023577135,0.00043663877,0.00022830676,0.00021179649,0.00013091252,0.0002845836,0.00019547554,0.00017473566,0.0020569614],"category_scores_gemma":[0.0002740311,0.000107503016,0.00019134737,0.000081698396,0.00016910041,0.00010541973,0.000120159166,0.000358824,0.00052714895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011504071,0.00038487665,0.00061511446,0.00014794513,0.000028868584,0.00016735482,0.00004327629,0.000648843,0.9672935,0.0002127744,0.00046996068,0.028837183],"study_design_scores_gemma":[0.00062573084,0.0076268134,0.0054229684,0.00003271652,0.00010173517,0.0008078446,0.00007138766,0.0032210145,0.97028637,0.00030342402,0.011484153,0.000015728698],"about_ca_topic_score_codex":0.00043566004,"about_ca_topic_score_gemma":0.00067179237,"teacher_disagreement_score":0.0020569614,"about_ca_system_score_codex":0.0001549639,"about_ca_system_score_gemma":0.00024061694,"threshold_uncertainty_score":0.0068811774},"labels":[],"label_agreement":null},{"id":"W2146457764","doi":"10.1016/j.exphem.2007.02.015","title":"G-CSF treatment of canine cyclical neutropenia: A comprehensive mathematical model","year":2007,"lang":"en","type":"article","venue":"Experimental Hematology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"University of Washington","keywords":"Haematopoiesis; Pharmacokinetics; Neutropenia; Hematopoietic growth factor; Granulocyte colony-stimulating factor; Granulocyte; Drug; Medicine; Pharmacology; Immunology; Biology; Internal medicine; Stem cell; Chemotherapy","score_opus":0.02531404669826776,"score_gpt":0.3088003671215914,"score_spread":0.28348632042332367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2146457764","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7405999,0.003938194,0.19671302,0.004440559,0.00022047666,0.00017134343,0.0018064589,0.00018833189,0.05192182],"genre_scores_gemma":[0.98053634,0.0009465417,0.006211078,0.0002303356,0.00006607065,0.0001326931,0.0002521562,0.000034166464,0.011590609],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998343,0.000053210588,0.000006096875,0.000027030956,0.000023986911,0.00005539837],"domain_scores_gemma":[0.99924076,0.00048361192,0.00013755959,0.000018437893,0.00006352662,0.000056198973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050746166,0.00061759196,0.0014339008,0.00057826453,0.0004057194,0.0009277071,0.0012338879,0.0020643068,0.0026474863],"category_scores_gemma":[0.0015883513,0.00041992162,0.000978097,0.0005383003,0.0010061378,0.0008068159,0.0006616006,0.00096784596,0.0001591562],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000395768,0.000045258592,0.0003435576,0.000035203317,0.000018037752,0.00005983999,0.000014669596,0.98677176,0.0004606099,0.01076881,0.0004273611,0.0010151952],"study_design_scores_gemma":[0.000027529066,0.00002620699,0.00020300181,0.0000046064206,0.000022187136,0.000018963463,0.000013027233,0.9962457,0.000108596985,0.0030306128,0.0002930008,0.0000065026024],"about_ca_topic_score_codex":0.023712998,"about_ca_topic_score_gemma":0.014704546,"teacher_disagreement_score":0.023712998,"about_ca_system_score_codex":0.0014205944,"about_ca_system_score_gemma":0.0020347899,"threshold_uncertainty_score":0.047149956},"labels":[],"label_agreement":null},{"id":"W2147371361","doi":"10.3109/08820130009105141","title":"The Role of Inflammatory Mediators in the Mechanism of the Host Immune Response Induced by Ischemia-Reperfusion Injury","year":2000,"lang":"en","type":"article","venue":"Immunological Investigations","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"Immune system; Immunology; CD8; MHC class II; Major histocompatibility complex; Flow cytometry; Medicine; Ex vivo; CD3; Internal medicine; Endocrinology; In vivo; Biology","score_opus":0.0070811782576381006,"score_gpt":0.21595003531762616,"score_spread":0.20886885705998806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147371361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9473867,0.046112295,0.004193155,0.00041404634,0.000106097796,0.000093448376,0.00006715311,0.00003531452,0.0015918968],"genre_scores_gemma":[0.98248863,0.014001435,0.0020300094,0.00017877272,0.00017533987,0.00008253176,0.00006729882,0.0000041435646,0.0009718834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997981,0.00007627744,0.000020922196,0.000027968275,0.000027551534,0.000049130533],"domain_scores_gemma":[0.9998311,0.000037615715,0.00007083388,0.000010944188,0.000017880768,0.00003169277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046023857,0.0005271879,0.00048354614,0.00035300976,0.00021071383,0.00039507565,0.00022903192,0.00043483463,0.0010011542],"category_scores_gemma":[0.00021850773,0.00014368794,0.00030612282,0.00016618546,0.00040322624,0.00041765484,0.0002645156,0.00049204816,0.00015439355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004346162,0.000688718,0.013179994,0.0015632058,0.00008540761,0.0027062087,0.0004029885,0.00042378882,0.93644536,0.0013145116,0.00024907154,0.03859465],"study_design_scores_gemma":[0.0005499588,0.02970358,0.2638686,0.00044365757,0.0008181571,0.010817028,0.0016559681,0.0052263695,0.6677939,0.004263324,0.014773908,0.0000855406],"about_ca_topic_score_codex":0.00008501056,"about_ca_topic_score_gemma":0.00009386039,"teacher_disagreement_score":0.0010011542,"about_ca_system_score_codex":0.00017378789,"about_ca_system_score_gemma":0.00018541943,"threshold_uncertainty_score":0.003349185},"labels":[],"label_agreement":null},{"id":"W2147647424","doi":"10.1186/1743-422x-5-154","title":"Central nervous system Toll-like receptor expression in response to Theiler's murine encephalomyelitis virus-induced demyelination disease in resistant and susceptible mouse strains","year":2008,"lang":"en","type":"article","venue":"Virology Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Multiple Sclerosis Society; Multiple Sclerosis Society of Canada","keywords":"Biology; TLR3; Immunology; Multiple sclerosis; TLR2; TLR7; TLR4; Innate immune system; Virology; Receptor; Toll-like receptor; Virus; Demyelinating disease; Immune system; Genetics","score_opus":0.010920307757428372,"score_gpt":0.22267696973411136,"score_spread":0.211756661976683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147647424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929715,0.0022149351,0.0009319882,0.00012170663,0.00005063472,0.00003189012,0.0021495582,0.00006578586,0.0014619527],"genre_scores_gemma":[0.986238,0.0018099779,0.002088396,0.00021691553,0.000032168857,0.00016620598,0.003343759,0.000053105094,0.006051513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997527,0.000022717551,0.000029511677,0.000075306176,0.000051317293,0.000068300586],"domain_scores_gemma":[0.99966013,0.000029502922,0.00012924796,0.000019847734,0.000046580633,0.00011466514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015976287,0.00048188897,0.00029170222,0.0007570941,0.00018921231,0.00042968313,0.00017934611,0.00052914576,0.0022866488],"category_scores_gemma":[0.00013459213,0.00024208876,0.00035366256,0.0002067049,0.00030676206,0.0003039626,0.00016325644,0.0011184611,0.00069781096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028481387,0.00003600977,0.0003351365,0.000044805995,0.000008891131,0.00007033513,0.000024217743,0.000013899456,0.9988379,0.000033870623,0.000031845073,0.00027832758],"study_design_scores_gemma":[0.00012995346,0.0025730836,0.1069585,0.00007301696,0.0001443698,0.0019187944,0.00039294994,0.0007708381,0.8827676,0.00021808216,0.0040170224,0.000035721867],"about_ca_topic_score_codex":0.00029045422,"about_ca_topic_score_gemma":0.00038309745,"teacher_disagreement_score":0.0022866488,"about_ca_system_score_codex":0.00026856016,"about_ca_system_score_gemma":0.0001272739,"threshold_uncertainty_score":0.0076496005},"labels":[],"label_agreement":null},{"id":"W2147890509","doi":"10.1093/hmg/ddt335","title":"Different selective pressures shape the evolution of Toll-like receptors in human and African great ape populations","year":2013,"lang":"en","type":"article","venue":"Human Molecular Genetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"National Institute of General Medical Sciences; Agence Nationale de la Recherche; Howard Hughes Medical Institute","keywords":"Biology; Evolutionary biology; Negative selection; Innate immune system; Phylogenetics; Hominidae; Gene; Population; Genetics; Primate; Receptor; Genome; Ecology; Biological evolution","score_opus":0.012015844459077872,"score_gpt":0.23753661063572254,"score_spread":0.22552076617664465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147890509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986784,0.000544255,0.0003095719,0.00004663129,0.000001844794,0.0000026817518,0.00003940058,0.0000046163304,0.0003726057],"genre_scores_gemma":[0.9990582,0.00033220637,0.00037197128,0.000033798322,0.0000047414264,0.0000058556952,0.00005754966,0.0000063996713,0.000129368],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993783,0.00027087293,0.000029458764,0.00020711645,0.00006054867,0.00005369592],"domain_scores_gemma":[0.99963665,0.00016395593,0.00007264712,0.0000408196,0.000047969257,0.000037825368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008728569,0.00023633582,0.00030540192,0.0010837204,0.00050093903,0.0007227637,0.0002623566,0.00044905063,0.0013160219],"category_scores_gemma":[0.0016054116,0.00025429358,0.00023623287,0.00091851037,0.0009312109,0.0005344269,0.00077693793,0.00041019576,0.00016463775],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010070925,0.00006557349,0.7788323,0.0002602977,0.0009788934,0.0013285701,0.01169533,0.0015643126,0.1411303,0.0023888785,0.00031531785,0.06043316],"study_design_scores_gemma":[0.00001816751,0.00009095631,0.9913607,0.000031840453,0.00011115531,0.0011272021,0.0022710643,0.0010471568,0.001316062,0.0010155676,0.0015797849,0.000030326792],"about_ca_topic_score_codex":0.0014510847,"about_ca_topic_score_gemma":0.002631067,"teacher_disagreement_score":0.0014510847,"about_ca_system_score_codex":0.0001905915,"about_ca_system_score_gemma":0.00014486598,"threshold_uncertainty_score":0.0046161413},"labels":[],"label_agreement":null},{"id":"W2147990016","doi":"10.1152/ajpendo.00516.2010","title":"Neonatal programming of innate immune function","year":2010,"lang":"en","type":"review","venue":"American Journal of Physiology-Endocrinology and Metabolism","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Immune system; Endocrine system; Lipopolysaccharide; Physiology; Innate immune system; Biology; Disease; Neuroscience; Immunology; Medicine; Endocrinology; Internal medicine; Hormone","score_opus":0.010961147122322913,"score_gpt":0.26678081118544655,"score_spread":0.2558196640631236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147990016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004983327,0.99688715,0.0002738339,0.00019465307,0.0001757734,0.0000043992222,0.000022842558,0.0000118898,0.0019311459],"genre_scores_gemma":[0.0020050837,0.99649966,0.00028122452,0.00010101226,0.00011520153,0.00000947345,0.000030428955,0.0000014794693,0.0009564018],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999311,0.000010362351,0.000009654132,0.000016387216,0.000024235742,0.000008265629],"domain_scores_gemma":[0.999899,0.000028624314,0.000018230048,0.0000043853706,0.000033050834,0.000016736109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026604556,0.00059766363,0.00074109755,0.0006785722,0.00016139568,0.00044622304,0.00049507397,0.0005641865,0.0020246983],"category_scores_gemma":[0.00026359948,0.000113304806,0.00014564715,0.0005441938,0.0002790185,0.00065953383,0.0003845908,0.00077170087,0.0017373072],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007509579,0.000039313945,0.00034363515,0.0061614793,0.00002602625,0.00028656478,0.00004925993,0.00015655921,0.0095734,0.0035300634,0.011666014,0.96809256],"study_design_scores_gemma":[0.0000130492535,0.00014789739,0.0036368999,0.002037516,0.000055015902,0.0024534434,0.00008730465,0.00008897625,0.0036294956,0.0024959254,0.98533696,0.000017545846],"about_ca_topic_score_codex":0.0005244421,"about_ca_topic_score_gemma":0.00082770205,"teacher_disagreement_score":0.0020246983,"about_ca_system_score_codex":0.00037511054,"about_ca_system_score_gemma":0.00063546526,"threshold_uncertainty_score":0.0067733526},"labels":[],"label_agreement":null},{"id":"W2148079484","doi":"10.1128/cvi.00659-12","title":"Elevated Inflammatory Mediators in Adults with Oculorespiratory Syndrome following Influenza Immunization: a Public Health Agency of Canada/Canadian Institutes of Health Research Influenza Research Network Study","year":2013,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Public Health Agency of Canada; Izaak Walton Killam Health Centre; Dalhousie University; BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Health Canada; Michael Smith Health Research BC; Public Health Agency of Canada","keywords":"Medicine; Vaccination; Immunology; Adverse effect; Immunization; Internal medicine; Influenza vaccine; Immune system; Pediatrics","score_opus":0.10656059614967975,"score_gpt":0.380457315962112,"score_spread":0.27389671981243224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148079484","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99636096,0.0005548371,0.000050935887,0.000109643595,0.000012307667,0.00012337144,0.0013005247,0.0000037838347,0.0014836596],"genre_scores_gemma":[0.9980773,0.0003140899,0.000079723206,0.00009801465,0.00001775643,0.00003746164,0.0009955142,0.0000015499439,0.00037853752],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99938774,0.00004637918,0.000049016366,0.000114147566,0.00023031434,0.0001724108],"domain_scores_gemma":[0.99921906,0.000024495039,0.00021975176,0.00003277711,0.00030069062,0.00020319936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056311843,0.00057501084,0.0005661592,0.00065542985,0.0017094861,0.0008375671,0.0008162456,0.0006030673,0.0010669733],"category_scores_gemma":[0.0009795816,0.00038030793,0.0005256883,0.0017156206,0.000380632,0.0003413813,0.0005674001,0.0007124596,0.00019031223],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001479413,0.00005934225,0.9983784,0.000020390788,0.000036082834,0.00010667567,0.00016880193,0.00001082228,0.00014868756,0.000014445562,0.0002614642,0.00064685557],"study_design_scores_gemma":[0.0000132603045,0.00006549829,0.999331,0.000009552997,0.00002573285,0.000094874784,0.00019436637,0.00004026395,0.000014795958,0.000003857269,0.00020386638,0.0000029386167],"about_ca_topic_score_codex":0.7493219,"about_ca_topic_score_gemma":0.7557314,"teacher_disagreement_score":0.25067812,"about_ca_system_score_codex":0.0038152225,"about_ca_system_score_gemma":0.0043258155,"threshold_uncertainty_score":0.5043088},"labels":[],"label_agreement":null},{"id":"W2148236325","doi":"10.1189/jlb.1004607","title":"Local coordination verses systemic disregulation: complexities in leukocyte recruitment revealed by local and systemic activation of TLR4 in vivo","year":2005,"lang":"en","type":"review","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; In vivo; Immunology; Cell biology; Genetics","score_opus":0.0567024050480467,"score_gpt":0.32529315364984696,"score_spread":0.26859074860180027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148236325","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00048354245,0.99763143,0.00036689182,0.00030128236,0.00018262115,0.0000024485466,0.000006992697,0.000009538233,0.0010151064],"genre_scores_gemma":[0.002706385,0.99548537,0.00034385777,0.00026684528,0.00022003811,0.0000068958034,0.000015873642,0.0000019697995,0.00095274276],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998342,0.00003056425,0.000019990692,0.00004160573,0.00005341426,0.000020200678],"domain_scores_gemma":[0.99984896,0.000051297768,0.000026001773,0.000008653345,0.000042563533,0.00002256358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004820569,0.0006003089,0.0012607726,0.0010032854,0.00019316288,0.0008333538,0.0007430369,0.0011588493,0.001237034],"category_scores_gemma":[0.00035020045,0.000201194,0.00026049447,0.00090045785,0.0006419316,0.0014615086,0.00044141742,0.0011286944,0.0016772354],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022671137,0.000059165344,0.00042134203,0.010053405,0.00006497422,0.0008108134,0.000121068144,0.0004272835,0.019993924,0.008160099,0.015068519,0.94459265],"study_design_scores_gemma":[0.000032645727,0.0002853665,0.0025771754,0.0016231595,0.000105251725,0.0061706943,0.00017155749,0.00020002891,0.006430563,0.0046593216,0.9777123,0.000031908225],"about_ca_topic_score_codex":0.0004325577,"about_ca_topic_score_gemma":0.0006000249,"teacher_disagreement_score":0.0012607726,"about_ca_system_score_codex":0.0005842082,"about_ca_system_score_gemma":0.00059631036,"threshold_uncertainty_score":0.0042387843},"labels":[],"label_agreement":null},{"id":"W2148673830","doi":"10.1128/cvi.00063-14","title":"Activation of Innate Immune Responses by Haemophilus influenzae Lipooligosaccharide","year":2014,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NOSM University; National Research Council Canada; Lakehead University","funders":"","keywords":"Innate immune system; Haemophilus influenzae; Microbiology; Proinflammatory cytokine; Biology; Immunology; Tumor necrosis factor alpha; Immune system; Lipopolysaccharide; Acquired immune system; Antigen; Antigen-presenting cell; T cell; Inflammation","score_opus":0.01865276345053871,"score_gpt":0.2974023068988877,"score_spread":0.27874954344834896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148673830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959954,0.0021449537,0.00068096316,0.00006322821,0.000022810029,0.000027301174,0.00012037804,0.0000188334,0.00092613586],"genre_scores_gemma":[0.9967405,0.0011055018,0.0009511466,0.000080530335,0.000015380409,0.000031886975,0.00023203214,0.0000030668575,0.0008399605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999912,0.000023801958,0.0000080354785,0.000010261393,0.000017170412,0.000028769844],"domain_scores_gemma":[0.99995375,0.0000066983703,0.000012860864,0.0000046858545,0.000008399939,0.000013679317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010476983,0.0003601292,0.00017284558,0.00008946239,0.00007561809,0.00014672214,0.000073513205,0.00018836734,0.00072748],"category_scores_gemma":[0.00008989767,0.000067465386,0.0001907766,0.000055377706,0.00012617669,0.00010033536,0.00016762142,0.00025418887,0.00020142163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011262328,0.000014084497,0.00020432551,0.00003736199,0.000002561301,0.000039211158,0.0000066119496,0.000021370235,0.99875724,0.00001389563,0.000013001729,0.0007776633],"study_design_scores_gemma":[0.00004115803,0.0016389781,0.027078798,0.00002432874,0.000022955874,0.00036010784,0.000096422285,0.0007881685,0.96754104,0.00011306446,0.0022841392,0.000010816383],"about_ca_topic_score_codex":0.00023145921,"about_ca_topic_score_gemma":0.00027121976,"teacher_disagreement_score":0.00072748,"about_ca_system_score_codex":0.00013123412,"about_ca_system_score_gemma":0.00010642978,"threshold_uncertainty_score":0.0024336576},"labels":[],"label_agreement":null},{"id":"W2148835099","doi":"10.4049/jimmunol.178.12.7833","title":"Identification and Characterization of Novel Bone Marrow Myeloid DEC205+Gr-1+ Cell Subsets That Differentially Express Chemokine and TLRs","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"University of Pennsylvania","keywords":"Chemokine; Bone marrow; Identification (biology); Myeloid; Biology; Cell biology; Immunology; Inflammation","score_opus":0.009337618020551386,"score_gpt":0.2130366965086011,"score_spread":0.20369907848804972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148835099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99592674,0.0008799505,0.00157039,0.000045103287,0.00000965314,0.00006736206,0.00047223186,0.000027100388,0.0010016025],"genre_scores_gemma":[0.99154365,0.0007205089,0.004376162,0.00012027898,0.00003786526,0.000084545834,0.0012571125,0.0000143806965,0.0018455639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986947,0.000019649615,0.00001318541,0.00002873144,0.000026907985,0.00004195141],"domain_scores_gemma":[0.99991095,0.000009350922,0.000023323624,0.000010820251,0.00001465079,0.000030869123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009422187,0.00018557294,0.00023330441,0.00025425357,0.00012514082,0.00029729077,0.00010435662,0.000178407,0.0013693366],"category_scores_gemma":[0.00011845711,0.00009041083,0.00013418758,0.00015030462,0.000077722216,0.00010159098,0.00017450689,0.0002538544,0.0007658595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022359681,0.00003237219,0.0036921,0.00004140056,0.0000062072913,0.00023693795,0.00003420137,0.00003384985,0.99096054,0.0000757474,0.000060962455,0.004601911],"study_design_scores_gemma":[0.00012854551,0.0023999321,0.2848698,0.00005183772,0.00016356084,0.014927628,0.000615197,0.002574554,0.67848325,0.00034462786,0.015408697,0.00003247057],"about_ca_topic_score_codex":0.00020957952,"about_ca_topic_score_gemma":0.00041097644,"teacher_disagreement_score":0.0013693366,"about_ca_system_score_codex":0.00008287943,"about_ca_system_score_gemma":0.00011757326,"threshold_uncertainty_score":0.0045808554},"labels":[],"label_agreement":null},{"id":"W2149103864","doi":"10.1183/13993003/erj.42.suppl_57.4626","title":"Role of Toll-Like Receptors in Tuberculosis Infection","year":2013,"lang":"en","type":"article","venue":"European Respiratory Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immunology; Tuberculosis; Medicine; TLR2; Mycobacterium tuberculosis; Immunity; Toll-like receptor; Disease; Receptor; Population; Immune system; Innate immune system; Internal medicine; Environmental health; Pathology","score_opus":0.009206645441676792,"score_gpt":0.21505959334476496,"score_spread":0.20585294790308817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149103864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93272036,0.062947,0.00058255077,0.00088892924,0.000103311264,0.000029290317,0.00023540044,0.000017253193,0.002475964],"genre_scores_gemma":[0.99483854,0.004189139,0.0002794583,0.00010536246,0.000070255905,0.000011974095,0.00009181187,0.0000016146649,0.00041193436],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99968326,0.00014881858,0.00003115334,0.000035647547,0.00003743517,0.00006373587],"domain_scores_gemma":[0.9995315,0.00013278791,0.00017479497,0.000018541383,0.000045219116,0.00009711656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054006616,0.0002464534,0.0002704526,0.0004500918,0.00021922226,0.0003877919,0.000227791,0.00047047468,0.0022922733],"category_scores_gemma":[0.00082022906,0.00011164265,0.0002096375,0.00027834126,0.00020626764,0.00027589052,0.00028771083,0.00036169088,0.00034635994],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005149199,0.000541072,0.86069536,0.0010204265,0.0002649581,0.00462005,0.0004871257,0.0005836819,0.048957407,0.000792442,0.0018032017,0.075085066],"study_design_scores_gemma":[0.00016201397,0.0017983235,0.9637059,0.00049769715,0.00024606014,0.016674202,0.000512452,0.0012147896,0.0053216773,0.0013871957,0.008443778,0.00003582963],"about_ca_topic_score_codex":0.00023650263,"about_ca_topic_score_gemma":0.00014982854,"teacher_disagreement_score":0.0022922733,"about_ca_system_score_codex":0.0001673295,"about_ca_system_score_gemma":0.0001952628,"threshold_uncertainty_score":0.0076684356},"labels":[],"label_agreement":null},{"id":"W2149116091","doi":"10.1097/01.shk.0000180074.69143.77","title":"IMPLICATION OF TOLL-LIKE RECEPTOR AND TUMOR NECROSIS FACTOR α SIGNALING IN SEPTIC SHOCK","year":2005,"lang":"en","type":"review","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":152,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto; University Health Network","funders":"","keywords":"Septic shock; Tumor necrosis factor alpha; TLR4; Sepsis; Lipopolysaccharide; Immunology; Toll-like receptor; Signal transduction; Cytokine; Medicine; Inflammation; Immune system; Proinflammatory cytokine; Biology; Innate immune system; Cell biology","score_opus":0.026049001768548737,"score_gpt":0.2970014441831835,"score_spread":0.2709524424146348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149116091","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020464092,0.9979274,0.00015470533,0.00020957437,0.0002930306,0.0000030399567,0.0000069428934,0.0000071921027,0.001193388],"genre_scores_gemma":[0.0010773889,0.99721164,0.00018506176,0.00018658614,0.00018563392,0.0000049645487,0.000016116985,9.539253e-7,0.0011315906],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998752,0.00002116153,0.00001888813,0.000019434694,0.000052950087,0.000012406289],"domain_scores_gemma":[0.9998227,0.00005350378,0.000027344106,0.0000047867875,0.00006376403,0.000028048134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035829606,0.00061609957,0.00083033333,0.0012062128,0.00026171954,0.00069650006,0.0006772407,0.0009441665,0.0024104742],"category_scores_gemma":[0.00044485595,0.00017522721,0.00023332509,0.0013007778,0.00033206155,0.0012181469,0.0003791931,0.0010241708,0.002758618],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015112465,0.00007961158,0.0002609231,0.008652703,0.000055113,0.00050188374,0.00007189153,0.0003502746,0.005022443,0.0034311777,0.025654467,0.9557684],"study_design_scores_gemma":[0.000024013436,0.00015090463,0.001177625,0.0013715338,0.000052688752,0.0023747561,0.0000940642,0.00008424313,0.0011157885,0.0019985882,0.9915417,0.000014014168],"about_ca_topic_score_codex":0.00057654356,"about_ca_topic_score_gemma":0.00082995254,"teacher_disagreement_score":0.0024104742,"about_ca_system_score_codex":0.0005481505,"about_ca_system_score_gemma":0.00086635444,"threshold_uncertainty_score":0.008063853},"labels":[],"label_agreement":null},{"id":"W2149323922","doi":"10.1016/s0165-0270(00)00201-6","title":"The detection and quantitation of inflammation in the central nervous system during experimental allergic encephalomyelitis using the radiopharmaceutical 99mTc-RP128","year":2000,"lang":"en","type":"article","venue":"Journal of Neuroscience Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bayer (Canada)","funders":"","keywords":"Encephalomyelitis; Inflammation; In vivo; Central nervous system; Multiple sclerosis; Experimental autoimmune encephalomyelitis; Immunology; Medicine; Pharmacology; Pathology; Biology; Internal medicine","score_opus":0.03810574103611562,"score_gpt":0.3600076305825081,"score_spread":0.3219018895463925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149323922","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9612232,0.007245265,0.027812181,0.00024793966,0.00010023679,0.000115756695,0.00023281405,0.00019931635,0.0028232844],"genre_scores_gemma":[0.9533603,0.0031062348,0.036625795,0.00019303657,0.00008456829,0.00024076152,0.0006231362,0.00009368215,0.005672424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996234,0.000093233706,0.000019507244,0.000091312504,0.00008762581,0.00008490199],"domain_scores_gemma":[0.99971384,0.000078465724,0.00006820947,0.000034382272,0.000047880636,0.000057270045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007863288,0.00060061796,0.00040089246,0.00066670263,0.00034495167,0.00053906895,0.0005684797,0.001011654,0.0009543942],"category_scores_gemma":[0.00061393454,0.00043194124,0.0002759321,0.00032248136,0.0007808469,0.00064480375,0.00041308862,0.0016254428,0.00040596427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035762755,0.00002834107,0.0002269872,0.00005118493,0.000005774764,0.00005624262,0.000023601146,0.000025494914,0.997623,0.00007340865,0.000031072832,0.0014972844],"study_design_scores_gemma":[0.00005818103,0.0009236724,0.0063916706,0.000017937664,0.00005543599,0.000760267,0.0000509891,0.0011287878,0.989489,0.00008947431,0.0010211021,0.000013408002],"about_ca_topic_score_codex":0.0010211034,"about_ca_topic_score_gemma":0.0014691408,"teacher_disagreement_score":0.0010211034,"about_ca_system_score_codex":0.00042928293,"about_ca_system_score_gemma":0.00038003,"threshold_uncertainty_score":0.0041585565},"labels":[],"label_agreement":null},{"id":"W2150189819","doi":"10.1002/rcm.5084","title":"A new rapid and micro‐scale hydrolysis, using triethylamine citrate, for lipopolysaccharide characterization by mass spectrometry","year":2011,"lang":"en","type":"article","venue":"Rapid Communications in Mass Spectrometry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Chemistry; Lipid A; Lipopolysaccharide; Mass spectrometry; Escherichia coli; Triethylamine; Molecule; Hydrolysis; Moiety; Matrix-assisted laser desorption/ionization; Chromatography; Biochemistry; Combinatorial chemistry; Organic chemistry; Desorption","score_opus":0.024135745939112847,"score_gpt":0.25383542265408504,"score_spread":0.22969967671497218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150189819","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08780397,0.009214365,0.89407253,0.0009786999,0.00049904245,0.0010982893,0.0006684957,0.0016250669,0.0040395735],"genre_scores_gemma":[0.17212759,0.006759372,0.80876964,0.0010001272,0.00017251773,0.0012809865,0.0017770765,0.00020177815,0.007910922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863833,0.00025306188,0.000084815816,0.00035043075,0.0005938587,0.000079559846],"domain_scores_gemma":[0.9994074,0.00018485915,0.00010697439,0.000086655535,0.00015106653,0.00006302593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009189209,0.0015028121,0.00073155464,0.0014628529,0.0005631115,0.00066885946,0.0010517385,0.0018660598,0.0026247818],"category_scores_gemma":[0.0012866578,0.00058243464,0.0006217382,0.0005625552,0.00077907834,0.00095213,0.00084461184,0.0017128215,0.0025249477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004621838,0.0000376612,0.00011422143,0.000120778976,0.000015219156,0.00008701716,0.000017575005,0.000044920882,0.9905115,0.0002049889,0.00023242291,0.00856749],"study_design_scores_gemma":[0.000038944978,0.00047676562,0.0018668888,0.000031609306,0.000046974816,0.002351037,0.00004194115,0.004087922,0.9775393,0.00031972196,0.013135774,0.0000631119],"about_ca_topic_score_codex":0.00045493845,"about_ca_topic_score_gemma":0.000988281,"teacher_disagreement_score":0.0026247818,"about_ca_system_score_codex":0.00038321048,"about_ca_system_score_gemma":0.00076090114,"threshold_uncertainty_score":0.008780777},"labels":[],"label_agreement":null},{"id":"W2150532865","doi":"10.1084/jem.20081779","title":"Increased NOD2-mediated recognition of <i>N</i>-glycolyl muramyl dipeptide","year":2009,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":226,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Muramyl dipeptide; NOD2; Microbiology; Peptidoglycan; Secretion; Muramic acid; Biology; Tumor necrosis factor alpha; Innate immune system; Immunity; Immune system; Acquired immune system; Chemistry; Bacteria; Immunology; Biochemistry; Genetics","score_opus":0.015249141334990328,"score_gpt":0.26218966842222036,"score_spread":0.24694052708723002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150532865","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99690044,0.00068641163,0.0012543529,0.00006736442,0.000021558657,0.000021172242,0.00015130348,0.000049272498,0.0008482133],"genre_scores_gemma":[0.99652076,0.00027569104,0.0013760917,0.000053550048,0.000009167722,0.00002409173,0.00027392025,0.000011460319,0.0014551991],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987304,0.000028326218,0.000011461953,0.000026567594,0.00002482906,0.000035844867],"domain_scores_gemma":[0.9998896,0.000013928417,0.000036832666,0.000008376003,0.000011228081,0.00004001463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001280021,0.0004291819,0.000171592,0.000090061985,0.000060952967,0.00020983806,0.00011102785,0.00021632221,0.001048658],"category_scores_gemma":[0.00010124525,0.000087436936,0.00015703775,0.000059623806,0.00020706827,0.00017963449,0.00020112877,0.00038035345,0.00021817735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000668099,0.000008834896,0.000049975017,0.0000137643665,0.0000010919534,0.00001938839,0.0000020781322,0.000011742517,0.99964595,0.000013548101,0.0000064797277,0.00016027244],"study_design_scores_gemma":[0.0000169441,0.00037815006,0.0017255634,0.0000029461255,0.0000061563187,0.00017122384,0.000010599151,0.00029904832,0.99674195,0.00001488759,0.0006305489,0.0000020256532],"about_ca_topic_score_codex":0.00020473987,"about_ca_topic_score_gemma":0.00025226007,"teacher_disagreement_score":0.001048658,"about_ca_system_score_codex":0.00019358862,"about_ca_system_score_gemma":0.00013012758,"threshold_uncertainty_score":0.003508091},"labels":[],"label_agreement":null},{"id":"W2150587815","doi":"10.1124/jpet.103.062216","title":"Tumor Necrosis Factor-α-Induced Cytokine-Induced Neutrophil Chemoattractant-1 (CINC-1) Production by Rat Gastric Epithelial Cells: Role of Reactive Oxygen Species and Nuclear Factor-κB","year":2004,"lang":"en","type":"article","venue":"Journal of Pharmacology and Experimental Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"","keywords":"Tumor necrosis factor alpha; Cytokine; Reactive oxygen species; Gastric mucosa; Stimulation; Biology; Oxidative stress; Molecular biology; Endocrinology; Chemistry; Internal medicine; Cell biology; Immunology; Medicine; Stomach; Biochemistry","score_opus":0.018427069258714245,"score_gpt":0.26783163763564494,"score_spread":0.2494045683769307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150587815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99363846,0.0034417151,0.0015315714,0.00020387433,0.0001056813,0.000046916055,0.0003581274,0.000042775726,0.00063098624],"genre_scores_gemma":[0.99498004,0.0015641054,0.001443797,0.00007056675,0.000064461536,0.000049068054,0.00053388963,0.000008006542,0.0012861509],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996978,0.000054387096,0.0000340676,0.000040762072,0.000055342647,0.00011769502],"domain_scores_gemma":[0.999721,0.00004250803,0.00005335949,0.00006575584,0.00003732315,0.00008004466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049505837,0.00066645676,0.00051473064,0.0003304456,0.00028733857,0.0003812848,0.00023380076,0.0004218909,0.0016521111],"category_scores_gemma":[0.00031627645,0.00031072454,0.00067485165,0.0003699437,0.00044670398,0.0006403838,0.00033866646,0.00090008386,0.0004616866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010109945,0.00010879227,0.00079966,0.00012129447,0.00001075589,0.00028195247,0.000071380855,0.000080606434,0.99591607,0.00007962435,0.000079025056,0.001439817],"study_design_scores_gemma":[0.0001535513,0.002402652,0.032009523,0.000022589733,0.00005855052,0.0008544253,0.00039705963,0.001058756,0.9613992,0.00018716896,0.0014381274,0.000018386001],"about_ca_topic_score_codex":0.0004767826,"about_ca_topic_score_gemma":0.00060123164,"teacher_disagreement_score":0.0016521111,"about_ca_system_score_codex":0.00027022732,"about_ca_system_score_gemma":0.00036147927,"threshold_uncertainty_score":0.0055269003},"labels":[],"label_agreement":null},{"id":"W2150669224","doi":"10.1186/cc12854","title":"Effects of ventilation strategy on distribution of lung inflammatory cell activity","year":2013,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Heart, Lung, and Blood Institute; Société de Pneumologie de Langue Française","keywords":"Medicine; Mechanical ventilation; Lung; Anesthesia; Ventilation (architecture); Perfusion; Fraction of inspired oxygen; Arterial blood; Pharmacology; Cardiology; Internal medicine","score_opus":0.005417557267926602,"score_gpt":0.24318033092063654,"score_spread":0.23776277365270992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150669224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99802256,0.0009603862,0.000479931,0.000045885365,0.000027891596,0.000026459995,0.00007533691,0.000017481067,0.00034420262],"genre_scores_gemma":[0.99869686,0.0003916803,0.00038590218,0.000046723857,0.000014861001,0.000038872804,0.00009344998,0.0000065712065,0.00032516438],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997292,0.000051751125,0.000023667151,0.00005609041,0.000043554926,0.00009575274],"domain_scores_gemma":[0.99963915,0.0001019182,0.00009742629,0.000029765071,0.000022806355,0.00010889231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027486947,0.0003464588,0.00034586052,0.00013485896,0.00008165953,0.00040161808,0.00022318366,0.0003226219,0.0015060976],"category_scores_gemma":[0.00043503963,0.00010823982,0.00016206327,0.00007076656,0.00043567418,0.00030487828,0.00023666413,0.0005638809,0.00014360233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009324691,0.00030245222,0.0028957378,0.00014485518,0.00004407527,0.00015588592,0.00006170051,0.00019711822,0.97840697,0.00009979991,0.00008436719,0.008282336],"study_design_scores_gemma":[0.0003319819,0.032644425,0.105010435,0.000079236306,0.00023793019,0.00070177624,0.00033580454,0.0028369918,0.85522896,0.00022634384,0.0023312701,0.000034871973],"about_ca_topic_score_codex":0.00021474456,"about_ca_topic_score_gemma":0.0003209209,"teacher_disagreement_score":0.0015060976,"about_ca_system_score_codex":0.00023352096,"about_ca_system_score_gemma":0.00020293181,"threshold_uncertainty_score":0.0050383806},"labels":[],"label_agreement":null},{"id":"W2150944106","doi":"10.1084/jem.20111171","title":"Synthetic double-stranded RNA induces innate immune responses similar to a live viral vaccine in humans","year":2011,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":269,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Center for Research Resources; Bill and Melinda Gates Foundation; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Génome Québec; Foundation for the National Institutes of Health","keywords":"Innate immune system; Immune system; Pattern recognition receptor; Biology; Inflammasome; NOD1; Immunopotentiator; Interferon; Adjuvant; TLR3; Immunology; Agonist; Receptor; Immunity; Acquired immune system; Toll-like receptor; NOD2; Inflammation; Biochemistry","score_opus":0.03613078098885543,"score_gpt":0.2954756710512649,"score_spread":0.25934489006240946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150944106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99344796,0.0012460466,0.0032475183,0.000110370194,0.000047608086,0.00007766668,0.00011010526,0.00007467721,0.0016379295],"genre_scores_gemma":[0.997081,0.0003659605,0.0012384966,0.00014227926,0.000021755068,0.000057192316,0.00014405597,0.000007127116,0.0009420579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998647,0.000043505817,0.00000776026,0.00004280217,0.00002245208,0.000018858807],"domain_scores_gemma":[0.99992704,0.000021245496,0.000021022805,0.0000120253035,0.0000066594084,0.000012080961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022550534,0.00024979634,0.0001890455,0.00012158722,0.00008196011,0.00018796546,0.000050586357,0.00026391557,0.0013549821],"category_scores_gemma":[0.00022457883,0.00010925617,0.00012225873,0.00005159993,0.00025521973,0.000095928364,0.000085574604,0.00025136358,0.0002711215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043042673,0.00011911599,0.0009908382,0.000043963144,0.000008497161,0.00009463177,0.000026563646,0.00006343668,0.99283034,0.00012549711,0.0000879446,0.0051787584],"study_design_scores_gemma":[0.0004192539,0.025987567,0.040445138,0.000046278983,0.00009092728,0.0043202997,0.0001624171,0.0016297327,0.9167078,0.0008173043,0.009354236,0.00001897553],"about_ca_topic_score_codex":0.000060924205,"about_ca_topic_score_gemma":0.00007464494,"teacher_disagreement_score":0.0013549821,"about_ca_system_score_codex":0.00011168248,"about_ca_system_score_gemma":0.0000980073,"threshold_uncertainty_score":0.0045328736},"labels":[],"label_agreement":null},{"id":"W2150951503","doi":"10.1139/y06-076","title":"hPepT1 selectively transports muramyl dipeptide but not Nod1-activating muramyl peptides","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Novartis Foundation","keywords":"Muramyl dipeptide; NOD2; NOD1; Peptidoglycan; Chemistry; Cytosol; Cell biology; Biology; Biochemistry; Biophysics; Receptor; Innate immune system; In vitro","score_opus":0.008504585217512585,"score_gpt":0.22420763287755915,"score_spread":0.21570304766004658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150951503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99425745,0.0011690252,0.0031309244,0.0001225402,0.00002447137,0.000022519265,0.00023044448,0.000050305935,0.0009924545],"genre_scores_gemma":[0.9876643,0.0007927272,0.004352205,0.000078810684,0.000017056916,0.000025247537,0.00086947356,0.00005075165,0.006149398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999899,0.0000141658065,0.0000074072295,0.000027729908,0.000025843048,0.00002582787],"domain_scores_gemma":[0.9999052,0.000025859406,0.000021752247,0.0000092945,0.000010659653,0.000027312482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000146811,0.0002052653,0.00033649008,0.00009962965,0.000116186704,0.00035494764,0.00019822067,0.00026066243,0.0009762029],"category_scores_gemma":[0.00014068723,0.00010908316,0.0001872319,0.000072372255,0.00020813817,0.00028965226,0.00020944889,0.00048412423,0.00036966612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048952643,0.0000074313975,0.00008598128,0.00002213166,0.000001423425,0.000028494007,0.000007439127,0.000026766136,0.99925524,0.000056766134,0.000014248966,0.00044507816],"study_design_scores_gemma":[0.000012979334,0.00012350992,0.0012205708,0.0000034235914,0.0000065510753,0.00016605707,0.000018049794,0.0005340883,0.9963421,0.000020656194,0.00154901,0.0000030129875],"about_ca_topic_score_codex":0.00072940043,"about_ca_topic_score_gemma":0.00068013964,"teacher_disagreement_score":0.0009762029,"about_ca_system_score_codex":0.00046984432,"about_ca_system_score_gemma":0.00024390839,"threshold_uncertainty_score":0.003409028},"labels":[],"label_agreement":null},{"id":"W2151072717","doi":"10.2147/rru.s58643","title":"IL-8 secretion in primary cultures of prostate cells is associated with prostate cancer aggressiveness","year":2014,"lang":"en","type":"article","venue":"Research and Reports in Urology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Prostate Cancer Canada; Canadian Urological Association","keywords":"Prostate cancer; Medicine; Prostate; Secretion; PCA3; Cancer research; Cancer; Carcinogenesis; Internal medicine","score_opus":0.010584093065802193,"score_gpt":0.28427286657072837,"score_spread":0.27368877350492615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151072717","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914193,0.00398104,0.0024848718,0.000057412435,0.000048246813,0.00005149987,0.0006297839,0.00010056967,0.0012272791],"genre_scores_gemma":[0.9927285,0.0013177803,0.0020709138,0.00005053011,0.00005978858,0.000100428646,0.0022918312,0.00001555169,0.0013648577],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996414,0.00006335916,0.00003447355,0.00005619492,0.00013387167,0.0000707617],"domain_scores_gemma":[0.9993894,0.00018664871,0.00009191312,0.000071588634,0.00013225192,0.00012826441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025706083,0.0003639745,0.0004294821,0.0004787176,0.00017363501,0.00038906827,0.00019161282,0.00023837938,0.0018603039],"category_scores_gemma":[0.00027168434,0.00015328736,0.00025610605,0.00047747046,0.00021699483,0.0001495803,0.00024769956,0.0008232508,0.00066885597],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034109372,0.000091625225,0.006789485,0.00006426033,0.000018822368,0.000119402255,0.00006795061,0.000042200434,0.99111146,0.000010713733,0.00007381458,0.001269127],"study_design_scores_gemma":[0.000058725247,0.0032198506,0.1744994,0.000026580517,0.0001019225,0.0020330586,0.00025784166,0.0010124876,0.81584764,0.0000630577,0.0028614644,0.000018034918],"about_ca_topic_score_codex":0.00031109594,"about_ca_topic_score_gemma":0.0004161165,"teacher_disagreement_score":0.0018603039,"about_ca_system_score_codex":0.00019242207,"about_ca_system_score_gemma":0.00015863516,"threshold_uncertainty_score":0.006223321},"labels":[],"label_agreement":null},{"id":"W2151114733","doi":"10.4049/jimmunol.170.12.6141","title":"Overexpression of Toll-Like Receptor 4 Amplifies the Host Response to Lipopolysaccharide and Provides a Survival Advantage in Transgenic Mice","year":2003,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre; Montreal General Hospital","funders":"Canadian Institutes of Health Research","keywords":"TLR4; Biology; Innate immune system; Immune system; Transgene; Toll-like receptor; Microbiology; Receptor; Lipopolysaccharide; TLR2; Salmonella; Macrophage; Immunology; Gene; Bacteria; In vitro; Genetics","score_opus":0.009966859770406086,"score_gpt":0.24305718521995015,"score_spread":0.23309032544954406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151114733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99021333,0.0011320659,0.00499528,0.0004127069,0.00008560791,0.00007220475,0.0011897021,0.00053333293,0.0013658648],"genre_scores_gemma":[0.9784103,0.0016847574,0.0071603046,0.00021974585,0.000104849016,0.00020852355,0.0022334252,0.00032760398,0.009650573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995421,0.000084910476,0.000057875037,0.00010487784,0.00009089371,0.00011929934],"domain_scores_gemma":[0.9991875,0.00011560903,0.0002970115,0.000075741205,0.00003879555,0.00028522403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004171974,0.0010559558,0.00052315625,0.0013182516,0.00029510085,0.0005622968,0.0004934314,0.0009308113,0.0031843674],"category_scores_gemma":[0.00028789,0.0006636926,0.0005496801,0.00034292988,0.0008173823,0.00047183462,0.00048787918,0.0018372044,0.00123946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003507738,0.00008611779,0.00013189542,0.00002755132,0.00000795328,0.00012362738,0.000016926962,0.000046118927,0.99835545,0.00013866078,0.000059302867,0.00065554865],"study_design_scores_gemma":[0.00050062157,0.0024083771,0.007747939,0.00004074469,0.00010537492,0.001958334,0.00009262237,0.0020249137,0.97858226,0.00041349695,0.006085363,0.000040033894],"about_ca_topic_score_codex":0.0003360994,"about_ca_topic_score_gemma":0.00047316914,"teacher_disagreement_score":0.0031843674,"about_ca_system_score_codex":0.00050170266,"about_ca_system_score_gemma":0.00026238261,"threshold_uncertainty_score":0.0106527805},"labels":[],"label_agreement":null},{"id":"W2151127655","doi":"10.1158/0008-5472.can-10-2833","title":"LPS-Induced TLR4 Signaling in Human Colorectal Cancer Cells Increases β1 Integrin-Mediated Cell Adhesion and Liver Metastasis","year":2011,"lang":"en","type":"article","venue":"Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Metastasis; TLR4; Medicine; Cancer research; Colorectal cancer; Cancer; Immunology; Receptor; Internal medicine","score_opus":0.08350852750680367,"score_gpt":0.34026465619218565,"score_spread":0.256756128685382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151127655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99660444,0.00089419197,0.0007318258,0.00013782326,0.000033808785,0.000029555438,0.00035597922,0.000037128742,0.0011752693],"genre_scores_gemma":[0.99348575,0.00083981897,0.0013256028,0.00010332615,0.000018434577,0.00009590297,0.0013153094,0.000006354861,0.002809461],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980384,0.000044605804,0.000019523477,0.000022062444,0.00004025201,0.00006968055],"domain_scores_gemma":[0.999951,0.000009875563,0.000008984798,0.0000070607484,0.00000807762,0.000015042272],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011527308,0.00031303338,0.00024800465,0.00022669965,0.00017690076,0.0002394452,0.00011377761,0.000258596,0.0025974247],"category_scores_gemma":[0.00011149318,0.00015683963,0.00033192005,0.00018078263,0.00012104166,0.0001297832,0.00018411923,0.0006370473,0.0005955827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033157106,0.000115119896,0.00024698192,0.000052342224,0.0000068326367,0.00006834765,0.000021229647,0.000057021698,0.9979792,0.000039950675,0.00010267186,0.0009788934],"study_design_scores_gemma":[0.000114897084,0.0022119733,0.014610097,0.000011287024,0.000032617474,0.00043191545,0.00010703388,0.0021567564,0.97709537,0.00004663877,0.0031728067,0.000008567631],"about_ca_topic_score_codex":0.0010459562,"about_ca_topic_score_gemma":0.0011928952,"teacher_disagreement_score":0.0025974247,"about_ca_system_score_codex":0.00022012752,"about_ca_system_score_gemma":0.0002099099,"threshold_uncertainty_score":0.008689225},"labels":[],"label_agreement":null},{"id":"W2151375858","doi":"10.33549/physiolres.932054","title":"Experimental Endotoxemia Induces Leukocyte Adherence and Plasma Extravasation Within the Rat Pial Microcirculation","year":2011,"lang":"en","type":"article","venue":"Physiological Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Fakultní nemocnice Hradec Králové","keywords":"Extravasation; Microcirculation; Intravital microscopy; Vascular permeability; Blood–brain barrier; Sepsis; Lipopolysaccharide; Cytokine; Pathology; Medicine; Endothelium; Inflammation; Tumor necrosis factor alpha; Immunology; Internal medicine; Central nervous system","score_opus":0.20965364655140145,"score_gpt":0.360112921328865,"score_spread":0.15045927477746357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151375858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966612,0.0009150215,0.0017791284,0.00004819455,0.000017986673,0.000022234313,0.000064460684,0.00003913036,0.00045264876],"genre_scores_gemma":[0.9940883,0.0013706352,0.0026425177,0.000049705708,0.000023480881,0.000101118436,0.00019814234,0.000009401372,0.0015167042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984145,0.000024751014,0.000009004271,0.000033258075,0.00003228338,0.00005910219],"domain_scores_gemma":[0.9998425,0.000018766676,0.0000694965,0.000018173958,0.000013546966,0.00003739574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016479385,0.0005171297,0.00028002565,0.00026388085,0.00016279444,0.0002069889,0.00015473548,0.00029524072,0.0012810475],"category_scores_gemma":[0.00013807109,0.00020379292,0.00021620364,0.0001674267,0.00035619063,0.00029257397,0.00022698514,0.0009766193,0.00019476355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060210575,0.00012349973,0.0003938172,0.000037715574,0.000006694528,0.00014526713,0.000046641675,0.0000444859,0.99688333,0.000092006456,0.000023782106,0.0016005916],"study_design_scores_gemma":[0.00008090518,0.004357109,0.012992339,0.00001322045,0.000040067513,0.00054162735,0.00008814537,0.0010688935,0.97986734,0.00013571492,0.0008054278,0.00000919217],"about_ca_topic_score_codex":0.00054701685,"about_ca_topic_score_gemma":0.00066783745,"teacher_disagreement_score":0.0012810475,"about_ca_system_score_codex":0.00024383937,"about_ca_system_score_gemma":0.00025523335,"threshold_uncertainty_score":0.004285574},"labels":[],"label_agreement":null},{"id":"W2151718282","doi":"10.1186/1742-2094-9-229","title":"Expression of myeloid differentiation factor 88 in neurons is not requisite for the induction of sickness behavior by interleukin-1β","year":2012,"lang":"en","type":"article","venue":"Journal of Neuroinflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Sickness behavior; Tumor necrosis factor alpha; Cytokine; Inflammation; Biology; Lipopolysaccharide; Interleukin; Immune system; Immunology; Microglia; Endocrinology; Nestin; Internal medicine; Medicine; Cell biology; Stem cell; Neural stem cell","score_opus":0.02368092127552158,"score_gpt":0.2660093889084792,"score_spread":0.24232846763295762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2151718282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99736494,0.00058875314,0.000827826,0.00007058555,0.000019936471,0.000016380367,0.00027144092,0.000037572205,0.00080255687],"genre_scores_gemma":[0.99497885,0.0006639156,0.0018009006,0.000044023418,0.000009103783,0.000065766835,0.0006502031,0.000021026037,0.0017662465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999801,0.000022947506,0.000025770105,0.000039207687,0.00005279308,0.000058384972],"domain_scores_gemma":[0.9996799,0.000020140453,0.00014788898,0.000036446872,0.000024630093,0.00009098594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000108882276,0.00025583562,0.00034326516,0.00016896438,0.0000862857,0.0002209815,0.00019157902,0.00020108334,0.0014100578],"category_scores_gemma":[0.00015628443,0.00013127779,0.0002243248,0.000077484154,0.0003306466,0.00017732481,0.00023590673,0.00058832444,0.0005234702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030103634,0.000038661005,0.00043026573,0.000043570617,0.000003422851,0.000039418104,0.000007688405,0.000016927117,0.99818367,0.000048115126,0.000026067595,0.0008610273],"study_design_scores_gemma":[0.000101720565,0.0014642545,0.02808113,0.00004590505,0.00004224465,0.00092651823,0.000088713874,0.0005409734,0.9653498,0.00012911388,0.0032231514,0.0000064116584],"about_ca_topic_score_codex":0.00014567423,"about_ca_topic_score_gemma":0.00028975392,"teacher_disagreement_score":0.0014100578,"about_ca_system_score_codex":0.0002143972,"about_ca_system_score_gemma":0.00018495748,"threshold_uncertainty_score":0.004717171},"labels":[],"label_agreement":null},{"id":"W2152098692","doi":"10.1002/ddr.1140","title":"Suppressive effects of adenosine on the 5‐lipoxygenase pathway in human polymorphonuclear leukocytes","year":2001,"lang":"en","type":"article","venue":"Drug Development Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Adenosine; Arachidonic acid; Leukotriene; Arachidonate 5-lipoxygenase; Leukotriene B4; Chemistry; Biochemistry; Biosynthesis; Lipid signaling; Adenosine receptor; Pharmacology; Biology; Agonist; Receptor; Inflammation; Enzyme; Immunology","score_opus":0.0280855612135569,"score_gpt":0.29210777566194585,"score_spread":0.26402221444838897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152098692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.851472,0.13862765,0.0030202633,0.00032525993,0.00026852568,0.000076915996,0.000622978,0.000056243865,0.005530191],"genre_scores_gemma":[0.97259706,0.022358228,0.00085343554,0.00022476466,0.00014296194,0.00007235768,0.00053609884,0.0000058343176,0.0032091674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998995,0.000038562055,0.000008352316,0.000015508667,0.000018223069,0.000019859739],"domain_scores_gemma":[0.9999659,0.000010745631,0.000008332201,0.00000301403,0.000006010681,0.0000060348048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012011299,0.00021203894,0.00015513896,0.00016373364,0.00009092535,0.00020061855,0.000085542466,0.00016896229,0.0018730066],"category_scores_gemma":[0.0001396141,0.00005825814,0.00016232092,0.0001226036,0.00005424026,0.000085678876,0.00012841493,0.00019318167,0.00033137813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001085245,0.000080341124,0.0012101042,0.000457087,0.000026999387,0.00056875526,0.000079616075,0.000075843294,0.9723541,0.00018829163,0.00036812486,0.023505421],"study_design_scores_gemma":[0.00019843153,0.005282432,0.05613705,0.00014727151,0.00029768734,0.0028223998,0.00028375795,0.00093876314,0.8885045,0.00043726788,0.04493209,0.000018326355],"about_ca_topic_score_codex":0.00038124685,"about_ca_topic_score_gemma":0.00037483437,"teacher_disagreement_score":0.0018730066,"about_ca_system_score_codex":0.00007296537,"about_ca_system_score_gemma":0.00013986022,"threshold_uncertainty_score":0.0062658787},"labels":[],"label_agreement":null},{"id":"W2152592401","doi":"10.1186/cc5178","title":"Dose effects of recombinant human IL-11 on the systemic hemodynamic function in hemorrhagic shock","year":2007,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Bayer Canada","keywords":"Medicine; Hemorrhagic shock; Recombinant DNA; Resuscitation; Shock (circulatory); Pharmacology; Hemodynamics; Systemic administration; Intensive care medicine; Anesthesia; Internal medicine; In vivo","score_opus":0.009262637121197183,"score_gpt":0.25957448549187956,"score_spread":0.2503118483706824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152592401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99401146,0.0023214868,0.0016324762,0.00028795053,0.00016859686,0.00011647598,0.00019071907,0.00009954731,0.0011712761],"genre_scores_gemma":[0.9931211,0.0015629692,0.002504541,0.00020151274,0.00017931122,0.00012296313,0.000298485,0.000030825096,0.0019782472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960274,0.00017118015,0.00003564301,0.000042550535,0.00007439007,0.00007359663],"domain_scores_gemma":[0.99922776,0.0003167028,0.00014993487,0.00012800601,0.000041118295,0.00013647498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005883738,0.0006922101,0.00077946595,0.00049604446,0.00016347796,0.0004556172,0.00026515723,0.00066072075,0.0019584238],"category_scores_gemma":[0.000962411,0.00023493594,0.0003335181,0.00018736583,0.0008404019,0.00058533123,0.00027905047,0.0017201105,0.00038008377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.021662844,0.006086871,0.00064698106,0.00026777582,0.00007039592,0.00020279702,0.00012352172,0.0009351382,0.950063,0.00040903295,0.00041264162,0.019118836],"study_design_scores_gemma":[0.0011706208,0.052739218,0.0046638297,0.0000345844,0.00012463279,0.0002735461,0.00007430449,0.0012170633,0.93777347,0.00023115036,0.0016687264,0.000028844333],"about_ca_topic_score_codex":0.00011103251,"about_ca_topic_score_gemma":0.00018850245,"teacher_disagreement_score":0.0019584238,"about_ca_system_score_codex":0.00019999058,"about_ca_system_score_gemma":0.00028023557,"threshold_uncertainty_score":0.0065516233},"labels":[],"label_agreement":null},{"id":"W2152651181","doi":"10.4049/jimmunol.178.7.4373","title":"Bcl10 Controls TCR- and FcγR-Induced Actin Polymerization","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"Deutsche Krebshilfe; Schweizerische Akademie der Medizinischen Wissenschaften; Centre National de la Recherche Scientifique; Studienstiftung des Deutschen Volkes; Deutsche Forschungsgemeinschaft; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Cell biology; Phosphorylation; BCL10; Ionomycin; Biology; T-cell receptor; Actin; Jurkat cells; Chemistry; T cell; Immune system; Biochemistry; Immunology; Intracellular","score_opus":0.008898193397320507,"score_gpt":0.23876485689921864,"score_spread":0.22986666350189813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152651181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962412,0.0008351198,0.0014850836,0.00006282512,0.000020469814,0.000010477236,0.00010608633,0.00007896879,0.0011598046],"genre_scores_gemma":[0.997451,0.0003106853,0.0006380359,0.000019444256,0.0000046791033,0.000011094556,0.0001408376,0.000023942792,0.0014003664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980456,0.000033986536,0.0000115578905,0.000033238775,0.000039082654,0.00007763794],"domain_scores_gemma":[0.9997367,0.0000548456,0.000081101156,0.000031607684,0.00001958445,0.00007606334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014920694,0.0003262006,0.00013337257,0.0001924195,0.00015763575,0.0004020251,0.00020419399,0.00027056737,0.0015774462],"category_scores_gemma":[0.00018391956,0.00016150915,0.00012390924,0.00009886269,0.0003139503,0.00019693906,0.0002190002,0.00048828934,0.00076945056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001539001,0.000021537318,0.00012306092,0.00001295081,0.0000010379096,0.000030535797,0.0000093237695,0.000026381735,0.9988329,0.000054236494,0.000019976844,0.0007141035],"study_design_scores_gemma":[0.000025806234,0.000116123454,0.0016286861,0.000003790083,0.000004809375,0.00016770807,0.000022891134,0.0007677818,0.99585944,0.000038625498,0.0013617533,0.0000025154675],"about_ca_topic_score_codex":0.0006042695,"about_ca_topic_score_gemma":0.00089800055,"teacher_disagreement_score":0.0015774462,"about_ca_system_score_codex":0.00050900655,"about_ca_system_score_gemma":0.00020031464,"threshold_uncertainty_score":0.0052770376},"labels":[],"label_agreement":null},{"id":"W2153134282","doi":"10.1093/infdis/jit807","title":"Toll-like Receptor Polymorphism Associations With HIV-1 Outcomes Among Sub-Saharan Africans","year":2013,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Allergy and Infectious Diseases; National Cancer Institute; National Human Genome Research Institute; National Institute of Mental Health; National Heart, Lung, and Blood Institute; Center for AIDS Research, University of Washington; National Institute on Drug Abuse; U.S. Public Health Service; National Institutes of Health; University of Cape Town; National Institute on Aging; University of Washington; Harvard University; Bill and Melinda Gates Foundation","keywords":"Single-nucleotide polymorphism; Haplotype; Immunology; Odds ratio; TLR9; Toll-like receptor; Medicine; TLR2; Biology; Genotype; Internal medicine; Genetics; Immune system; Gene; TLR4; Innate immune system; Gene expression","score_opus":0.0049980444268282595,"score_gpt":0.20057897707446443,"score_spread":0.19558093264763618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153134282","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99964607,0.00015223792,0.000028175287,0.000018246288,0.0000012163466,0.0000015333436,0.000062972,7.168791e-7,0.00008881771],"genre_scores_gemma":[0.9998535,0.00004151553,0.000027208509,0.000005230465,0.0000022551367,0.0000014472514,0.0000250109,3.381797e-7,0.000043545013],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981076,0.00007714223,0.000016045507,0.00003359316,0.000026252857,0.000036275167],"domain_scores_gemma":[0.9995371,0.000116321986,0.00022356656,0.000025188252,0.00003009592,0.00006767612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003815166,0.00024005827,0.00018674017,0.00040423032,0.00030868014,0.00027399635,0.00014689362,0.00021769488,0.0022337204],"category_scores_gemma":[0.0015369874,0.00013912798,0.0001492122,0.00045846627,0.00021633647,0.00016871259,0.00025075776,0.00025517496,0.0001015686],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022084253,0.00002382646,0.9970962,0.000011059662,0.000060381837,0.00010016631,0.00010834579,0.000049272727,0.00085755263,0.000030692794,0.000036228532,0.0014053163],"study_design_scores_gemma":[0.000014649861,0.00013897559,0.9985306,0.00001139107,0.000054222823,0.0004280462,0.0001631718,0.00016818503,0.00027862383,0.00006260657,0.00014689125,0.00000263224],"about_ca_topic_score_codex":0.0012116266,"about_ca_topic_score_gemma":0.0011887946,"teacher_disagreement_score":0.0022337204,"about_ca_system_score_codex":0.0000904605,"about_ca_system_score_gemma":0.000111957364,"threshold_uncertainty_score":0.007472515},"labels":[],"label_agreement":null},{"id":"W2153252006","doi":"10.4049/jimmunol.180.12.8020","title":"CD45 Regulates TLR-Induced Proinflammatory Cytokine and IFN-β Secretion in Dendritic Cells","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"University of British Columbia","keywords":"Proinflammatory cytokine; Protein tyrosine phosphatase; Secretion; Cell biology; TLR2; Cytokine; TLR4; Dendritic cell; Biology; Chemistry; Immunology; Signal transduction; Immune system; Inflammation; Endocrinology","score_opus":0.010564126457522994,"score_gpt":0.2106386092193551,"score_spread":0.2000744827618321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153252006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930314,0.0026415177,0.0025170478,0.00008914956,0.00003148708,0.000017676166,0.00012811583,0.000039427865,0.0015041565],"genre_scores_gemma":[0.99738044,0.0008215963,0.0007772399,0.00004751204,0.0000115309995,0.000009934932,0.00012518793,0.000011851342,0.00081473973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981827,0.0000376237,0.00001355452,0.00003131161,0.00003942189,0.000059816357],"domain_scores_gemma":[0.9998678,0.00001675315,0.000044699445,0.000010357722,0.000020937126,0.000039408398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011767691,0.00022057082,0.00017793657,0.00021172944,0.00014703053,0.0005283895,0.00007630944,0.00014338258,0.0007105373],"category_scores_gemma":[0.00016130369,0.00013971253,0.00015931245,0.000110521134,0.00015144082,0.00017401358,0.00021390754,0.00031031898,0.0003459761],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007667888,0.0000113321485,0.00033910415,0.000012174665,0.0000016328343,0.00003595176,0.00000869064,0.000024955503,0.9984536,0.000060630857,0.00001836611,0.0009569411],"study_design_scores_gemma":[0.000039904782,0.00014160447,0.014875387,0.000009648876,0.000022181252,0.00028928634,0.0000667892,0.0018271571,0.9800101,0.00012788102,0.0025859028,0.0000040997356],"about_ca_topic_score_codex":0.00026126005,"about_ca_topic_score_gemma":0.00029532658,"teacher_disagreement_score":0.0007105373,"about_ca_system_score_codex":0.00028336202,"about_ca_system_score_gemma":0.00014996003,"threshold_uncertainty_score":0.0023770332},"labels":[],"label_agreement":null},{"id":"W2153348025","doi":"10.1128/iai.01364-09","title":"Modulation of the Local Neutrophil Response by a Novel Hyaluronic Acid-Binding Peptide Reduces Bacterial Burden during Staphylococcal Wound Infection","year":2010,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"CXCL1; Staphylococcus aureus; Microbiology; TLR2; Chemokine; Antibiotics; Antimicrobial peptides; Biology; Immunology; Innate immune system; Immune system; Sepsis; Antimicrobial; Staphylococcal infections; Medicine; Bacteria","score_opus":0.007304106215447782,"score_gpt":0.22301250538337253,"score_spread":0.21570839916792475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153348025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99552876,0.0019255116,0.002002125,0.00004870065,0.000020686824,0.000035302743,0.000061461076,0.000023003526,0.00035452665],"genre_scores_gemma":[0.997122,0.00074062427,0.0014910406,0.00003178591,0.000011295266,0.00003289981,0.00006439172,0.0000028907898,0.000502994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999474,0.000015292933,0.000004331952,0.000009270981,0.00001188776,0.000011838275],"domain_scores_gemma":[0.9999604,0.0000065820936,0.000013991391,0.0000026830671,0.0000039904453,0.000012413644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010872726,0.00026729237,0.00019831672,0.000063239386,0.000043910473,0.00013304992,0.00012263178,0.00015602981,0.00045688305],"category_scores_gemma":[0.00008174499,0.00004367552,0.000068179594,0.000051424162,0.00013394954,0.00018685381,0.00011590055,0.0003469632,0.00008019897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003328958,0.00006751074,0.00009119371,0.00007090073,0.0000034812,0.000028187196,0.0000058704177,0.00009349057,0.9960472,0.00003214848,0.000023486935,0.0032036253],"study_design_scores_gemma":[0.00013328473,0.0054057026,0.006309551,0.000012899876,0.000019009245,0.0002851016,0.000026559987,0.0012477464,0.98480487,0.00005701303,0.0016920626,0.000006314695],"about_ca_topic_score_codex":0.000085183885,"about_ca_topic_score_gemma":0.0001612474,"teacher_disagreement_score":0.00045688305,"about_ca_system_score_codex":0.00007325799,"about_ca_system_score_gemma":0.00008572889,"threshold_uncertainty_score":0.0015283823},"labels":[],"label_agreement":null},{"id":"W2153867600","doi":"10.1097/01.asn.0000094084.18567.cc","title":"Differential Usage of Class II Transactivator Promoters PI and PIV during Inflammation and Injury in Kidney","year":2003,"lang":"en","type":"article","venue":"Journal of the American Society of Nephrology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"CIITA; Promoter; Transactivation; Biology; Molecular biology; IRF1; Kidney; Interferon gamma; Transcription factor; Gene expression; Immunology; Cytokine; Endocrinology; MHC class II; T cell; Gene; Immune system; Genetics","score_opus":0.005357077352299221,"score_gpt":0.21755358279000003,"score_spread":0.2121965054377008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153867600","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930154,0.0013670814,0.004721845,0.000041987285,0.000020117612,0.000019230733,0.00016552629,0.00006386624,0.00058485434],"genre_scores_gemma":[0.99590343,0.00059642066,0.002077218,0.000029966872,0.000010578364,0.000030340156,0.0003318788,0.000026652857,0.0009935317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995857,0.000048215712,0.00003322383,0.00011702866,0.00007925831,0.00013658051],"domain_scores_gemma":[0.99963653,0.000050942956,0.00012941277,0.000045668672,0.000052675423,0.0000847929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002887088,0.00030602186,0.00036403004,0.00032043847,0.00012515372,0.00050472573,0.00022580785,0.00023854626,0.0004952479],"category_scores_gemma":[0.00024482686,0.00030900314,0.00033397914,0.00017707374,0.00036160572,0.00029708847,0.00026911893,0.0007157149,0.0002402135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001291737,0.000007904303,0.0005097356,0.000013293235,0.0000021431267,0.000015993497,0.000016344566,0.000011863774,0.99880767,0.00004011159,0.0000052474297,0.00044056593],"study_design_scores_gemma":[0.00001372719,0.00021140676,0.010596052,0.0000073968927,0.000026584778,0.00027019257,0.0000624533,0.00049968995,0.9876494,0.0000742029,0.0005823605,0.00000648128],"about_ca_topic_score_codex":0.00031288326,"about_ca_topic_score_gemma":0.0004056111,"teacher_disagreement_score":0.00050472573,"about_ca_system_score_codex":0.00032966112,"about_ca_system_score_gemma":0.00028140075,"threshold_uncertainty_score":0.0023918748},"labels":[],"label_agreement":null},{"id":"W2153891358","doi":"10.1093/intimm/dxs074","title":"TAK1 contributes to the enhanced responsiveness of LTB4-treated neutrophils to Toll-like receptor ligands","year":2012,"lang":"en","type":"article","venue":"International Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; McGill University Health Centre; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"TLR2; Cell biology; p38 mitogen-activated protein kinases; TLR4; Proinflammatory cytokine; Receptor; Innate immune system; Toll-like receptor; Secretion; TLR9; Chemistry; Biology; Kinase; Signal transduction; Inflammation; Immune system; Immunology; MAPK/ERK pathway; Biochemistry; Gene expression","score_opus":0.008945662377642744,"score_gpt":0.2559787246608012,"score_spread":0.24703306228315844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153891358","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9857912,0.006122705,0.004538552,0.0004287665,0.0002787267,0.00006165487,0.0004138687,0.00011293014,0.0022516346],"genre_scores_gemma":[0.99450433,0.0014371331,0.0010038706,0.00010418508,0.00006735341,0.000080057405,0.0006384362,0.000017909892,0.0021467353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997253,0.00006112817,0.000024614772,0.000038524973,0.000057169043,0.000093232265],"domain_scores_gemma":[0.9998242,0.000018440885,0.00005620289,0.000015642907,0.000026249107,0.000059201695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032161342,0.00057616207,0.0005196812,0.00023465765,0.00021606847,0.00036092298,0.00029344193,0.00031919507,0.0038078986],"category_scores_gemma":[0.00025985003,0.00021081613,0.0006191089,0.00008760219,0.00022009519,0.0002170774,0.0002805748,0.00090018415,0.0011383047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005536086,0.000053723976,0.00028775618,0.00014015746,0.000010910202,0.00015225125,0.000029593433,0.000051883046,0.99722445,0.00008904083,0.00007900724,0.0013276164],"study_design_scores_gemma":[0.00012880903,0.00091744924,0.017793156,0.000034752957,0.0000711522,0.0010023543,0.000109151704,0.0013713029,0.97372705,0.0002443555,0.0045864936,0.00001393206],"about_ca_topic_score_codex":0.00017910566,"about_ca_topic_score_gemma":0.00017628734,"teacher_disagreement_score":0.0038078986,"about_ca_system_score_codex":0.00023869779,"about_ca_system_score_gemma":0.00024625892,"threshold_uncertainty_score":0.012738705},"labels":[],"label_agreement":null},{"id":"W2153913370","doi":"10.1128/cvi.00734-13","title":"Topical CpG Adjuvantation of a Protein-Based Vaccine Induces Protective Immunity to Listeria monocytogenes","year":2014,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Adjuvant; CpG Oligodeoxynucleotide; Immune system; Antigen; Immunology; Epitope; TLR9; Cytotoxic T cell; CD8; Medicine; Ovalbumin; T cell; Biology","score_opus":0.03250151658373545,"score_gpt":0.3227479287900288,"score_spread":0.2902464122062933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153913370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374807,0.0018225481,0.0032169872,0.00007213732,0.00006728858,0.000054740405,0.00013089954,0.00010747754,0.00077980006],"genre_scores_gemma":[0.9906985,0.001278751,0.0058062575,0.000097602,0.000037886275,0.000052041993,0.00028986085,0.000028315902,0.001710706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998921,0.00001436697,0.000009379074,0.000028750732,0.000027082759,0.00002830248],"domain_scores_gemma":[0.9999198,0.0000107643355,0.000025598634,0.000010295998,0.000011029383,0.000022449356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011333257,0.00040310938,0.0003742886,0.00017318956,0.00006294914,0.00018746396,0.00014444334,0.00035968245,0.00074700394],"category_scores_gemma":[0.00013633267,0.0001485294,0.00021783772,0.000108042965,0.00016992167,0.00019886887,0.00022430021,0.00054895255,0.00031597237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012695113,0.00005149168,0.00006596503,0.000051884796,0.000003483136,0.000014851738,0.0000044408353,0.00006124295,0.9974293,0.000015599528,0.0000256559,0.002149088],"study_design_scores_gemma":[0.000045892575,0.0024890082,0.0015041578,0.000012961939,0.000031483803,0.0001778549,0.0000113328615,0.0010735956,0.9934509,0.000027803178,0.0011703878,0.000004619135],"about_ca_topic_score_codex":0.00025470756,"about_ca_topic_score_gemma":0.0005231019,"teacher_disagreement_score":0.00074700394,"about_ca_system_score_codex":0.00017127064,"about_ca_system_score_gemma":0.00024255732,"threshold_uncertainty_score":0.0024989247},"labels":[],"label_agreement":null},{"id":"W2153917975","doi":"10.4049/jimmunol.175.11.7594","title":"Viral Inhibition of IL-1- and Neutrophil Elastase-Induced Inflammatory Responses in Bronchial Epithelial Cells","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Neutrophil elastase; Elastase; Immunology; Interleukin 8; Interleukin 22; Inflammation; Medicine; Chemistry; Interleukin; Cytokine; Enzyme; Biochemistry","score_opus":0.007674648315379383,"score_gpt":0.22034189470030743,"score_spread":0.21266724638492804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2153917975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99073994,0.005274621,0.0017317386,0.00014723961,0.000109612396,0.00006929161,0.00036528026,0.000059640373,0.0015026527],"genre_scores_gemma":[0.98947805,0.0033904763,0.0027252636,0.00008787045,0.000029529408,0.00012935339,0.00090017065,0.00001674563,0.003242545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996679,0.000079068835,0.000038306545,0.00003126608,0.000076115146,0.00010742393],"domain_scores_gemma":[0.99988675,0.000028745339,0.000026329952,0.000021265801,0.000012289124,0.000024594558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027142337,0.00046828098,0.00052452256,0.0001737415,0.0001456166,0.00032182565,0.00019557937,0.00030077115,0.0013304676],"category_scores_gemma":[0.00015275582,0.00013695496,0.0003941027,0.00014575677,0.00021327457,0.00018854758,0.00017328437,0.0008854121,0.000427224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001483389,0.00013108627,0.00006355413,0.000072357376,0.0000058160385,0.00002495301,0.000011229786,0.00005007744,0.99817777,0.00007586995,0.000029049843,0.0012098124],"study_design_scores_gemma":[0.0000745505,0.001580439,0.0048207915,0.000017612896,0.00002336251,0.00019481176,0.000041028376,0.001504836,0.98773277,0.00005018912,0.003953593,0.0000061786823],"about_ca_topic_score_codex":0.00048269532,"about_ca_topic_score_gemma":0.0007503401,"teacher_disagreement_score":0.0013304676,"about_ca_system_score_codex":0.00027538254,"about_ca_system_score_gemma":0.00027119546,"threshold_uncertainty_score":0.0044508576},"labels":[],"label_agreement":null},{"id":"W2154126938","doi":"10.4049/jimmunol.1001912","title":"CD8 T Cell-Intrinsic GITR Is Required for T Cell Clonal Expansion and Mouse Survival following Severe Influenza Infection","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"CD8; T cell; Cytotoxic T cell; Biology; Immune system; Immunology; Cell biology; In vitro; Genetics","score_opus":0.012146418362958855,"score_gpt":0.24474795182699863,"score_spread":0.23260153346403978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154126938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944687,0.0010943051,0.001654357,0.00014582387,0.000024571993,0.000031702748,0.0006327354,0.0002642212,0.0016837042],"genre_scores_gemma":[0.9950879,0.00036999455,0.0013390874,0.000085003965,0.000012934902,0.000056638724,0.0007538601,0.000058157537,0.002236453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995938,0.00006736654,0.00004145222,0.00006925633,0.00008409871,0.00014396042],"domain_scores_gemma":[0.9994536,0.00004325267,0.00018129808,0.00007090025,0.00004540988,0.00020552719],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018635526,0.0004532559,0.0003486975,0.0004984062,0.00020135961,0.00035642946,0.00029871392,0.00049353443,0.0013597816],"category_scores_gemma":[0.00023451228,0.00022621943,0.00032882212,0.00016349931,0.0002792429,0.00022253345,0.00032894223,0.0014000715,0.0008883207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012100407,0.000027690565,0.00030485966,0.000013774776,0.0000033986857,0.00006832884,0.000013612646,0.00003288273,0.9986766,0.000037743695,0.000037553007,0.00066247495],"study_design_scores_gemma":[0.000055809418,0.0007838708,0.021249639,0.000030247713,0.000033093558,0.0011066723,0.000110712666,0.0012925786,0.972049,0.00010222769,0.0031745285,0.000011420937],"about_ca_topic_score_codex":0.00053730403,"about_ca_topic_score_gemma":0.0008932465,"teacher_disagreement_score":0.0013597816,"about_ca_system_score_codex":0.00039790798,"about_ca_system_score_gemma":0.00023022095,"threshold_uncertainty_score":0.004548967},"labels":[],"label_agreement":null},{"id":"W2154165492","doi":"10.1136/mp.55.2.110","title":"CD40 activation in epithelial ovarian carcinoma cells modulates growth, apoptosis, and cytokine secretion","year":2002,"lang":"en","type":"article","venue":"Molecular Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; British Medical Association; McMaster University","keywords":"Biology; Cytokine; Cancer research; CD40; Molecular biology; Apoptosis; Cell culture; Cell growth; Cell biology; Immunology; Cytotoxic T cell; In vitro","score_opus":0.0064614522616035855,"score_gpt":0.18704146480484501,"score_spread":0.18058001254324144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154165492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99621886,0.0018501315,0.0003456883,0.000054813638,0.000021354012,0.00001573546,0.00021413734,0.000020721944,0.0012585779],"genre_scores_gemma":[0.9965276,0.0010404926,0.00037822942,0.00003665313,0.000012378132,0.000035549427,0.00040067208,0.000003918678,0.0015645934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984574,0.000023142178,0.000010977652,0.000021145897,0.000045440913,0.000053515832],"domain_scores_gemma":[0.9999229,0.000020699217,0.000012450048,0.000009901991,0.000015885887,0.000018247338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009991935,0.00018239702,0.00019768332,0.00015510256,0.00016659542,0.00030627986,0.000087357184,0.00019779814,0.001940672],"category_scores_gemma":[0.00012334247,0.0000642352,0.00015468753,0.00024339734,0.00014998249,0.00014851893,0.00015966357,0.00040751524,0.00044613332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002843126,0.00006291522,0.00064676214,0.00007100729,0.0000037096813,0.000101998834,0.000030434605,0.00005504146,0.99665135,0.00003870885,0.00006181694,0.0019920443],"study_design_scores_gemma":[0.00005387381,0.000890674,0.014550889,0.000011147225,0.00002147334,0.00049368315,0.000113926806,0.0006951666,0.97784346,0.000050554863,0.005270938,0.0000043682567],"about_ca_topic_score_codex":0.00054543203,"about_ca_topic_score_gemma":0.00057832594,"teacher_disagreement_score":0.001940672,"about_ca_system_score_codex":0.00033453936,"about_ca_system_score_gemma":0.00022686204,"threshold_uncertainty_score":0.0064921975},"labels":[],"label_agreement":null},{"id":"W2154353399","doi":"10.1186/1471-2466-10-57","title":"Mechanical ventilation modulates Toll-like receptor-3-induced lung inflammation via a MyD88-dependent, TLR4-independent pathway: a controlled animal study","year":2010,"lang":"en","type":"article","venue":"BMC Pulmonary Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"National Heart, Lung, and Blood Institute","keywords":"Medicine; TLR4; Toll-like receptor; Inflammation; Toll; Receptor; Lung; Immunology; Innate immune system; Internal medicine","score_opus":0.0138272377510604,"score_gpt":0.2565408840936781,"score_spread":0.2427136463426177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154353399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99273044,0.0020942742,0.0030403745,0.00025044524,0.00015001865,0.00061946316,0.00047256806,0.0001320917,0.0005103312],"genre_scores_gemma":[0.98120177,0.002598706,0.0074841194,0.00028349287,0.00022287034,0.0027380118,0.0013438584,0.000057533805,0.0040696603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988875,0.00026911916,0.000103104954,0.00022417019,0.00019306384,0.00032305848],"domain_scores_gemma":[0.9990257,0.00012675633,0.00030972858,0.00016588684,0.000065517626,0.00030643443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017814551,0.0019981852,0.0014832225,0.0013813719,0.00078226154,0.00085996516,0.0015609353,0.0015123766,0.0022495363],"category_scores_gemma":[0.0004517641,0.0005997902,0.0015766991,0.00044105883,0.0025153668,0.0012568694,0.0005267363,0.002935005,0.00053481874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.018987566,0.010132271,0.0004994053,0.00040517718,0.00007882795,0.00023911578,0.00013532865,0.00032121266,0.9651971,0.00034169454,0.00019285877,0.0034693829],"study_design_scores_gemma":[0.0064695114,0.15591055,0.008558385,0.00014269743,0.00055502035,0.0009470183,0.0002823591,0.003613881,0.819391,0.00043207966,0.0036115313,0.00008600616],"about_ca_topic_score_codex":0.00055255264,"about_ca_topic_score_gemma":0.00085104525,"teacher_disagreement_score":0.0022495363,"about_ca_system_score_codex":0.0009267181,"about_ca_system_score_gemma":0.0009681733,"threshold_uncertainty_score":0.009421289},"labels":[],"label_agreement":null},{"id":"W2154536286","doi":"10.1080/08830180600785868","title":"Immune Mechanisms and Therapeutic Potential of CpG Oligodeoxynucleotides","year":2006,"lang":"en","type":"review","venue":"International Reviews of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Toll-Like Receptor 9; CpG Oligodeoxynucleotide; Immune system; CpG site; Immunology; Biology; Toll-like receptor; TLR9; Immunotherapy; Receptor; Innate immune system; Cancer research; DNA methylation; Gene; Genetics; Gene expression","score_opus":0.022057046980197028,"score_gpt":0.29740127023481944,"score_spread":0.27534422325462243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154536286","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006917579,0.9967012,0.0004020365,0.0002057628,0.00023992207,0.000005674069,0.000008340413,0.000009463977,0.0017358364],"genre_scores_gemma":[0.0042193527,0.9919733,0.0006694044,0.00034933805,0.00029783027,0.000020283578,0.00003185806,0.000002409774,0.002436109],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99991,0.000017965012,0.000009326919,0.00001680263,0.00003486397,0.000011176133],"domain_scores_gemma":[0.99994314,0.000022399025,0.000009243353,0.0000020950258,0.000014292675,0.0000087124245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029519794,0.0006919516,0.00070483406,0.0009794226,0.00015894175,0.00047963957,0.00049515587,0.00092144986,0.0019741294],"category_scores_gemma":[0.00018474422,0.00014800885,0.0002453103,0.0005332482,0.00033862624,0.0005935718,0.00029568636,0.0010771814,0.0015037598],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015548851,0.00016699977,0.00015680668,0.0056699426,0.0000429339,0.0006316495,0.000052429074,0.0005783557,0.03341684,0.0052334256,0.011944666,0.9419504],"study_design_scores_gemma":[0.00006256053,0.00039698806,0.0012280496,0.0013725391,0.00005339468,0.004970877,0.0000539766,0.0002049652,0.011289758,0.0031662136,0.9771777,0.000023072376],"about_ca_topic_score_codex":0.00025627334,"about_ca_topic_score_gemma":0.00041990244,"teacher_disagreement_score":0.0019741294,"about_ca_system_score_codex":0.00037012788,"about_ca_system_score_gemma":0.0003168387,"threshold_uncertainty_score":0.006604135},"labels":[],"label_agreement":null},{"id":"W2155305990","doi":"10.1126/science.1124256","title":"A Critical Role for the Innate Immune Signaling Molecule IRAK-4 in T Cell Activation","year":2006,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":111,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"","keywords":"Innate immune system; Cell biology; Acquired immune system; Biology; Signal transduction; Lipid raft; Immune system; T cell; Regulator; ZAP70; Innate lymphoid cell; T-cell receptor; Immunology; Biochemistry; Gene","score_opus":0.007319329745454724,"score_gpt":0.24734569828660694,"score_spread":0.24002636854115222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155305990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94327277,0.031058565,0.016881844,0.0014154137,0.00035824295,0.000079589845,0.00028829393,0.00030187026,0.006343302],"genre_scores_gemma":[0.98528033,0.0049505928,0.0062053553,0.00013820459,0.00014633218,0.000051188734,0.0002155523,0.000017274659,0.0029950328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980575,0.000050402803,0.000018604718,0.000032814933,0.000038089016,0.000054339667],"domain_scores_gemma":[0.99985445,0.000022737766,0.00003628187,0.000017702045,0.000025525098,0.000043395066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003349236,0.00069376477,0.00031479727,0.00033473174,0.00048583816,0.00061499426,0.00045873775,0.0005612118,0.0024046379],"category_scores_gemma":[0.00034049767,0.00018458469,0.00031798225,0.00014537007,0.0007388104,0.00074483093,0.0005672986,0.0008260782,0.00093259604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005040998,0.0000539328,0.0004656138,0.00018570219,0.000009765712,0.0004219514,0.000023687304,0.00024859016,0.9911101,0.0015066118,0.0001866658,0.005283294],"study_design_scores_gemma":[0.00016320475,0.000683231,0.008200974,0.000038449878,0.000053567743,0.0024341103,0.00010205839,0.0019932385,0.96574724,0.0028990612,0.017659733,0.00002518043],"about_ca_topic_score_codex":0.00021873807,"about_ca_topic_score_gemma":0.00012559653,"teacher_disagreement_score":0.0024046379,"about_ca_system_score_codex":0.0006111996,"about_ca_system_score_gemma":0.0005225121,"threshold_uncertainty_score":0.008044302},"labels":[],"label_agreement":null},{"id":"W2155752130","doi":"10.1074/jbc.m110.109736","title":"A Role for the Human Nucleotide-binding Domain, Leucine-rich Repeat-containing Family Member NLRC5 in Antiviral Responses","year":2010,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":168,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universität zu Köln; Ministry of Education, Culture, Sports, Science and Technology; University of Toronto; Deutsche Forschungsgemeinschaft; European Commission","keywords":"Innate immune system; Sendai virus; Biology; NOD2; NOD1; HEK 293 cells; Gene knockdown; Interferon; Immune system; Cell biology; Pattern recognition receptor; Virus; Receptor; Virology; Immunology; Cell culture; Biochemistry; Genetics","score_opus":0.024237489443734186,"score_gpt":0.277926368389603,"score_spread":0.25368887894586883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155752130","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92342204,0.052884962,0.016218673,0.0010459825,0.00014265676,0.000044960576,0.0003261143,0.00016046184,0.0057540783],"genre_scores_gemma":[0.99256355,0.0027284902,0.0026794113,0.00013872574,0.000021425743,0.0000065362347,0.00023765325,0.0000040550276,0.0016201608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998654,0.00003505321,0.000014077672,0.000033954137,0.000026459955,0.000025028405],"domain_scores_gemma":[0.9999074,0.000015034431,0.000028107388,0.0000103894445,0.000014566909,0.000024529616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017905614,0.00018772813,0.00016171487,0.00009892578,0.00013025993,0.0003679405,0.00013006244,0.00032551962,0.0009962119],"category_scores_gemma":[0.00013551355,0.000040008254,0.00022387759,0.0000709647,0.00018196156,0.00021108965,0.00013500963,0.00023804141,0.00023026289],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030143003,0.000039058476,0.0030631206,0.00020120667,0.000023375698,0.0006209191,0.00005782794,0.00027483547,0.98102784,0.0012378009,0.00031406,0.012838637],"study_design_scores_gemma":[0.00010146951,0.0011363652,0.09531293,0.00018884608,0.00015421724,0.00733441,0.00033972718,0.008327629,0.8218374,0.0011091729,0.06412163,0.000036181933],"about_ca_topic_score_codex":0.00031458668,"about_ca_topic_score_gemma":0.00025042112,"teacher_disagreement_score":0.0009962119,"about_ca_system_score_codex":0.00027763125,"about_ca_system_score_gemma":0.00018495519,"threshold_uncertainty_score":0.003332615},"labels":[],"label_agreement":null},{"id":"W2156613610","doi":"10.1016/j.cell.2008.02.043","title":"Identification of Oxidative Stress and Toll-like Receptor 4 Signaling as a Key Pathway of Acute Lung Injury","year":2008,"lang":"en","type":"article","venue":"Cell","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1356,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; Lawson Health Research Institute; Western University","funders":"Defense Threat Reduction Agency; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Canadian Institutes of Health Research; European Commission; University of Pittsburgh","keywords":"TRIF; TLR4; Oxidative stress; Biology; Immunology; Innate immune system; Influenza A virus subtype H5N1; Lung; Toll-like receptor; Receptor; Signal transduction; Inflammation; Immune system; Medicine; Cell biology; Internal medicine; Virus; Biochemistry","score_opus":0.006945992174811727,"score_gpt":0.22396490936352806,"score_spread":0.21701891718871633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156613610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9355983,0.03902678,0.014981073,0.0032054354,0.0005075088,0.0001309769,0.000568966,0.0001225103,0.0058585578],"genre_scores_gemma":[0.9743798,0.012337604,0.006515019,0.0004877472,0.00041431098,0.000114410694,0.00066475186,0.000009035336,0.0050773947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998067,0.000042913714,0.000016995826,0.00002626362,0.000053176605,0.00005394817],"domain_scores_gemma":[0.9998356,0.000022909728,0.000040946652,0.000014773558,0.000039866627,0.000045814144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005528885,0.0006554686,0.00041704674,0.00090376014,0.0004138965,0.0006788976,0.0004880662,0.0006295639,0.0021782843],"category_scores_gemma":[0.00021393548,0.000213263,0.0003595873,0.0003569361,0.0006339795,0.00094197766,0.0006003644,0.00094550283,0.0004354213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025147873,0.00025477158,0.004543343,0.0003938994,0.00005023237,0.0011979965,0.00007797107,0.00019187311,0.96537316,0.0032858837,0.00062852295,0.021487717],"study_design_scores_gemma":[0.00028679462,0.002483729,0.075608134,0.00011489845,0.00026186515,0.0061330535,0.0005651111,0.003339059,0.8810966,0.008514483,0.021550233,0.00004600452],"about_ca_topic_score_codex":0.00031882708,"about_ca_topic_score_gemma":0.00031920755,"teacher_disagreement_score":0.0021782843,"about_ca_system_score_codex":0.00046504746,"about_ca_system_score_gemma":0.0005221701,"threshold_uncertainty_score":0.007287085},"labels":[],"label_agreement":null},{"id":"W2156635682","doi":"10.2174/138161209787846775","title":"Antiviral Role of Toll-Like Receptor-3 Agonists Against Seasonal and Avian Influenza Viruses","year":2009,"lang":"en","type":"review","venue":"Current Pharmaceutical Design","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"","keywords":"Biology; Proinflammatory cytokine; Influenza A virus subtype H5N1; Virus; Virology; Influenza A virus; Innate immune system; Antigenic drift; Immunology; Antiviral drug; Immune system; Inflammation","score_opus":0.11360327170216698,"score_gpt":0.3950348244608122,"score_spread":0.2814315527586452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156635682","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3149793,0.6585801,0.0053088083,0.0008209424,0.0004920558,0.0000859305,0.00041183905,0.00012900741,0.019191854],"genre_scores_gemma":[0.7228036,0.26171607,0.0050439034,0.0008971023,0.00023995715,0.00008950689,0.00032494238,0.000011321749,0.008873494],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99997103,0.000008555352,0.0000034574302,0.000003990716,0.0000069511025,0.0000061063856],"domain_scores_gemma":[0.9999839,0.000004031445,0.0000048542092,7.0810864e-7,0.0000036703293,0.0000027770807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077338285,0.00016259062,0.00012639006,0.00009230997,0.000052685325,0.00014218935,0.00008639149,0.00014663878,0.000721874],"category_scores_gemma":[0.000058235873,0.000039172992,0.00017313292,0.00005163537,0.000054873413,0.0001265968,0.00007285524,0.00016777523,0.0001717832],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008562488,0.00011651542,0.00095410016,0.0034068236,0.000072535506,0.0005189844,0.00007051136,0.0009780254,0.75791585,0.0014791901,0.0026365505,0.23099469],"study_design_scores_gemma":[0.0002709526,0.008376291,0.016437393,0.0009086821,0.0003664478,0.004123989,0.0003335015,0.0025329643,0.685567,0.0017345445,0.279294,0.00005414836],"about_ca_topic_score_codex":0.00014065785,"about_ca_topic_score_gemma":0.00029046918,"teacher_disagreement_score":0.000721874,"about_ca_system_score_codex":0.000078232755,"about_ca_system_score_gemma":0.000119084885,"threshold_uncertainty_score":0.0024148822},"labels":[],"label_agreement":null},{"id":"W2156666186","doi":"10.1038/ni1471","title":"Cell surface 4-1BBL mediates sequential signaling pathways 'downstream' of TLR and is required for sustained TNF production in macrophages","year":2007,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Western University","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Eye Institute","keywords":"TLR4; TRIF; Tumor necrosis factor alpha; Cell biology; Toll-like receptor; Stimulation; Lipopolysaccharide; Receptor; Cytokine; Transcription factor; Biology; Signal transduction; Immunology; Innate immune system; Endocrinology; Biochemistry; Gene","score_opus":0.007381186230525865,"score_gpt":0.24193245038886893,"score_spread":0.23455126415834307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156666186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98750246,0.0037613474,0.005381978,0.00041581047,0.00010042381,0.00003490663,0.00056366884,0.0001870083,0.0020524238],"genre_scores_gemma":[0.9920237,0.0007687708,0.0028691823,0.00010848931,0.000059144983,0.000059267393,0.0012652378,0.000048282855,0.0027978707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890053,0.00019801196,0.000083477484,0.00012373464,0.00025537921,0.00043881754],"domain_scores_gemma":[0.9993131,0.00010917794,0.00017972749,0.00010063825,0.00013861098,0.00015862877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072657684,0.0006854512,0.00065078645,0.00063168217,0.00088053365,0.0013979218,0.00048234808,0.0008642808,0.0022918242],"category_scores_gemma":[0.0006924107,0.0006081875,0.0005712054,0.00036576815,0.0005574296,0.0010557893,0.00075110706,0.0019097842,0.001887255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039271466,0.00002354756,0.00023535042,0.000031444342,0.000003847444,0.00006300548,0.000016932323,0.00005314349,0.9984049,0.00015434039,0.000063266736,0.0005574832],"study_design_scores_gemma":[0.00008846006,0.00021157014,0.015342895,0.000016846068,0.00002544129,0.00061862887,0.00011020471,0.0014091098,0.97952616,0.0004989276,0.0021367604,0.0000148572035],"about_ca_topic_score_codex":0.0007153824,"about_ca_topic_score_gemma":0.001048687,"teacher_disagreement_score":0.0022918242,"about_ca_system_score_codex":0.001326256,"about_ca_system_score_gemma":0.0008107716,"threshold_uncertainty_score":0.009622753},"labels":[],"label_agreement":null},{"id":"W2156856697","doi":"10.4049/jimmunol.0901518","title":"TRIL, a Functional Component of the TLR4 Signaling Complex, Highly Expressed in Brain","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Cell biology; TLR4; Biology; HEK 293 cells; Gene knockdown; Signal transduction; Stimulation; Transmembrane protein; Molecular biology; Cell culture; Receptor; Neuroscience; Biochemistry; Genetics","score_opus":0.018941155623691468,"score_gpt":0.22997157677933708,"score_spread":0.2110304211556456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156856697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8910837,0.040657304,0.05417159,0.0013847576,0.0004604928,0.00024290774,0.003854102,0.0012799856,0.006865123],"genre_scores_gemma":[0.9282928,0.010718344,0.039087873,0.00063691766,0.00018618912,0.00017703221,0.009115268,0.00012756552,0.011658015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976796,0.00003242825,0.00002082764,0.000058309593,0.00006387363,0.0000565322],"domain_scores_gemma":[0.9997836,0.000018628522,0.00007942687,0.00001937577,0.000054192264,0.00004484435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016137461,0.00067865435,0.00049634505,0.0006942807,0.00044701638,0.0006730562,0.00044926532,0.00066735933,0.0021296933],"category_scores_gemma":[0.00025834242,0.00021931091,0.0005739707,0.00029385093,0.00033613516,0.00043460273,0.0005215304,0.0006953514,0.0019157998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013823445,0.00001975314,0.00047477806,0.00012215016,0.000016023667,0.00029451677,0.00002263847,0.000076882585,0.993975,0.00015792064,0.0002430117,0.0044590575],"study_design_scores_gemma":[0.000018129982,0.00032474566,0.00702498,0.000029779694,0.00006624137,0.0047808094,0.00011738536,0.0014512074,0.9652857,0.00024462503,0.020607261,0.00004903754],"about_ca_topic_score_codex":0.00067285314,"about_ca_topic_score_gemma":0.0008285247,"teacher_disagreement_score":0.0021296933,"about_ca_system_score_codex":0.00073140435,"about_ca_system_score_gemma":0.00048200035,"threshold_uncertainty_score":0.007124543},"labels":[],"label_agreement":null},{"id":"W2156926406","doi":"10.4049/jimmunol.0901374","title":"CD36 and TLR Interactions in Inflammation and Phagocytosis: Implications for Malaria","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Hospital for Sick Children; Toronto General Hospital; University Health Network; University of Toronto; Centre for Global Health Research; Toronto Rehabilitation Institute","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Phagocytosis; CD36; Inflammation; Malaria; Immunology; Biology; Microbiology; Receptor; Genetics","score_opus":0.014751334981098256,"score_gpt":0.2767183160896996,"score_spread":0.26196698110860134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156926406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5293002,0.4268759,0.011984289,0.021991136,0.0005652597,0.000059067515,0.00025918472,0.00007865179,0.008886247],"genre_scores_gemma":[0.8859997,0.10351126,0.0052906764,0.0010214353,0.00045742793,0.00003110071,0.00010182223,0.000009888823,0.0035766987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981636,0.00005396073,0.000011593818,0.000027684677,0.00002692324,0.000063508014],"domain_scores_gemma":[0.99987566,0.000024483918,0.000030002586,0.000008299347,0.000014537582,0.00004690462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052270514,0.00037614917,0.000416375,0.000312812,0.00044464457,0.00058829697,0.00038911463,0.0009274605,0.0013890358],"category_scores_gemma":[0.000285223,0.0001788282,0.0002478295,0.00034631352,0.0007943265,0.0011022232,0.00064084964,0.0006724102,0.0002599494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003881339,0.000496086,0.014387694,0.0029135498,0.000134583,0.0042527607,0.00076088536,0.0025998505,0.7763964,0.05332675,0.006043888,0.13480626],"study_design_scores_gemma":[0.000625539,0.0033389232,0.18494208,0.0012753573,0.00046506355,0.023605913,0.003450873,0.031502906,0.36608773,0.08962171,0.29482114,0.00026272956],"about_ca_topic_score_codex":0.0008239218,"about_ca_topic_score_gemma":0.0008477084,"teacher_disagreement_score":0.0013890358,"about_ca_system_score_codex":0.0006472018,"about_ca_system_score_gemma":0.0005586106,"threshold_uncertainty_score":0.004695773},"labels":[],"label_agreement":null},{"id":"W2156961003","doi":"10.1111/j.1365-2958.2005.04711.x","title":"The lipid A palmitoyltransferase PagP: molecular mechanisms and role in bacterial pathogenesis","year":2005,"lang":"en","type":"review","venue":"Molecular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Bacterial outer membrane; Biology; Biochemistry; Bacteria; Palmitoylation; Lipid A; Phospholipid; Lipid bilayer; Enzyme; Cell biology; Biophysics; Microbiology; Membrane; Escherichia coli; Gene","score_opus":0.0069765964926005635,"score_gpt":0.23304782927395684,"score_spread":0.22607123278135627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2156961003","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7830923,0.18992426,0.01822579,0.002437384,0.00015558267,0.00006990919,0.00029923723,0.00034056514,0.005454897],"genre_scores_gemma":[0.9411064,0.048690986,0.004980349,0.00022110208,0.00010169342,0.000038834776,0.00028844603,0.000012439312,0.004559842],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999343,0.000013025011,0.0000044081435,0.00001577064,0.000011945722,0.000020510379],"domain_scores_gemma":[0.9999294,0.000009889778,0.000017893632,0.000004693469,0.000009355563,0.000028769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021775672,0.0004929251,0.00021703767,0.00028884812,0.00021262384,0.0006641716,0.00027399164,0.0009158803,0.0005613872],"category_scores_gemma":[0.00014131537,0.00015279907,0.0001696039,0.00023492785,0.000566034,0.0008180599,0.0004199394,0.0005019385,0.0005313238],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004705605,0.00004841686,0.0013008796,0.0003572939,0.000015646743,0.0004903215,0.00006542148,0.00051556656,0.96020675,0.0036022982,0.0003230821,0.032603674],"study_design_scores_gemma":[0.00011718981,0.0016211421,0.052688867,0.00018586814,0.00009989821,0.005724621,0.00047042494,0.008691304,0.85054225,0.022737637,0.05703452,0.00008629332],"about_ca_topic_score_codex":0.00022292229,"about_ca_topic_score_gemma":0.00013655008,"teacher_disagreement_score":0.0009158803,"about_ca_system_score_codex":0.0003566465,"about_ca_system_score_gemma":0.0002071506,"threshold_uncertainty_score":0.002587676},"labels":[],"label_agreement":null},{"id":"W2157169298","doi":"10.2174/138945011794751555","title":"The Molecular Mechanisms of Glucocorticoids-Mediated Neutrophil Survival","year":2011,"lang":"en","type":"review","venue":"Current Drug Targets","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":153,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Apotex (Canada); University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Immunology; Medicine; Asthma; Glucocorticoid; Cystic fibrosis; Bronchiolitis; Disease; Innate immune system; Immune system; Pathology; Internal medicine; Virus","score_opus":0.02834411754700061,"score_gpt":0.28573387889940677,"score_spread":0.25738976135240615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157169298","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073501316,0.99659157,0.0005626101,0.0003334967,0.00020603684,0.000008678885,0.000041206855,0.000015647402,0.0015057835],"genre_scores_gemma":[0.0058858707,0.991918,0.00045358337,0.0001673819,0.00017004942,0.00001857119,0.00006339247,0.0000018629399,0.0013212825],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999858,0.000024552508,0.000018524743,0.000022490762,0.00005179349,0.000024540032],"domain_scores_gemma":[0.9999316,0.000015757607,0.000017541503,0.0000035607995,0.0000197985,0.0000118486805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024956948,0.0007616861,0.0007929738,0.0007292913,0.00026293608,0.0007506176,0.0007468698,0.00077248045,0.0013985924],"category_scores_gemma":[0.0001642791,0.0002012769,0.0003286112,0.0005025534,0.00045117343,0.0008057388,0.0004238698,0.001185819,0.0013376571],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027216392,0.000092553826,0.00035802272,0.010761706,0.00007987516,0.0008683176,0.00012720704,0.0008880021,0.07395653,0.013838218,0.017446768,0.8813107],"study_design_scores_gemma":[0.00005088396,0.00032549724,0.0035985534,0.00147983,0.00009278608,0.0037086222,0.00014893626,0.00029861732,0.025716487,0.007340394,0.9571895,0.000049860293],"about_ca_topic_score_codex":0.0006629536,"about_ca_topic_score_gemma":0.00097609835,"teacher_disagreement_score":0.0013985924,"about_ca_system_score_codex":0.0008556813,"about_ca_system_score_gemma":0.00076679466,"threshold_uncertainty_score":0.0062084794},"labels":[],"label_agreement":null},{"id":"W2157310133","doi":"10.1016/j.immuni.2007.02.012","title":"The Toll–Interleukin-1 Receptor Member SIGIRR Regulates Colonic Epithelial Homeostasis, Inflammation, and Tumorigenesis","year":2007,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":334,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Azoxymethane; Biology; Homeostasis; Colitis; Immunology; Carcinogenesis; Inflammation; Intestinal epithelium; Epithelium; Immune system; Downregulation and upregulation; Proinflammatory cytokine; Receptor; Cancer research; Cell biology; Gene; Biochemistry","score_opus":0.009549740124022425,"score_gpt":0.24253102118841546,"score_spread":0.23298128106439303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157310133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9744889,0.017001197,0.0024301955,0.0007798642,0.00012282444,0.00001756558,0.00023619845,0.00023288984,0.004690393],"genre_scores_gemma":[0.99204916,0.0035451488,0.0009922207,0.00010842083,0.00005996567,0.000008732117,0.00021817285,0.000028986056,0.0029892076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996989,0.0000656095,0.000014990482,0.000039956096,0.00007426587,0.00010632272],"domain_scores_gemma":[0.99977475,0.000016168753,0.00007021297,0.00002163414,0.000041229378,0.00007600554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025643856,0.00044096136,0.0003451522,0.0005116562,0.00030999517,0.00082474377,0.00020233152,0.0003804343,0.0010849485],"category_scores_gemma":[0.0002422349,0.00020764934,0.00029728512,0.00026231608,0.00042877233,0.00035194252,0.000376714,0.00090887066,0.0004945691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014846118,0.000074211624,0.004492688,0.00012949797,0.000025324278,0.00049301394,0.000063329695,0.00018096641,0.97207785,0.00054386235,0.00078774604,0.019646836],"study_design_scores_gemma":[0.00018495462,0.0018985773,0.21969536,0.00009331392,0.00015416398,0.0029210453,0.00085245946,0.0034930808,0.74921674,0.0014141022,0.020014437,0.00006182231],"about_ca_topic_score_codex":0.0005013021,"about_ca_topic_score_gemma":0.0009671735,"teacher_disagreement_score":0.0010849485,"about_ca_system_score_codex":0.00040527544,"about_ca_system_score_gemma":0.00035156545,"threshold_uncertainty_score":0.0036295056},"labels":[],"label_agreement":null},{"id":"W2157494890","doi":"10.1186/1476-9255-7-57","title":"The role of toll-like receptors in acute and chronic lung inflammation","year":2010,"lang":"en","type":"article","venue":"Journal of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft; McGill University Health Centre; McGill University","keywords":"Medicine; Inflammation; Toll; Receptor; Human physiology; Molecular medicine; Immunology; Lung; Toll-like receptor; Intensive care medicine; Internal medicine; Innate immune system","score_opus":0.002469161216935541,"score_gpt":0.21467854661542987,"score_spread":0.21220938539849432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157494890","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011143366,0.9835783,0.0008321818,0.002429905,0.00038643178,0.000007735961,0.000023905597,0.000009778387,0.001588377],"genre_scores_gemma":[0.1280871,0.86420125,0.0015829597,0.0012042499,0.0021417025,0.00002545971,0.000047310616,0.000004874903,0.0027050439],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977654,0.000073359246,0.000034692897,0.000025529827,0.00005078947,0.00003907109],"domain_scores_gemma":[0.9997975,0.000079259466,0.00003449791,0.000006401531,0.000029228418,0.000053154465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008663474,0.00031142592,0.00042771702,0.00053971336,0.00021343346,0.0007565925,0.00031657208,0.000862801,0.0008898663],"category_scores_gemma":[0.00040204,0.00010275899,0.00016738646,0.0003103719,0.00079771294,0.000977941,0.00047377753,0.001019517,0.00027608525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018016109,0.00030949686,0.009747411,0.007385871,0.00014341745,0.0050539686,0.00092636625,0.0008414358,0.11514227,0.03558786,0.016039152,0.80702114],"study_design_scores_gemma":[0.0003208495,0.0036127113,0.07582701,0.005158793,0.0004014185,0.035554837,0.0021938717,0.0016319859,0.03503647,0.06649577,0.77355427,0.00021209527],"about_ca_topic_score_codex":0.00019436987,"about_ca_topic_score_gemma":0.0002246251,"teacher_disagreement_score":0.0008898663,"about_ca_system_score_codex":0.00027105073,"about_ca_system_score_gemma":0.00033488078,"threshold_uncertainty_score":0.0045817494},"labels":[],"label_agreement":null},{"id":"W2157651734","doi":"10.1152/ajpregu.00301.2006","title":"Circulating interleukin-6 induces fever through a STAT3-linked activation of COX-2 in the brain","year":2006,"lang":"en","type":"article","venue":"American Journal of Physiology-Regulatory, Integrative and Comparative Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":180,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Douglas Mental Health University Institute","funders":"","keywords":"Interleukin; Medicine; Immunology; Neuroscience; Biology; Cytokine","score_opus":0.022282622609290818,"score_gpt":0.28332919510175275,"score_spread":0.26104657249246194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157651734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99571425,0.0015710358,0.0017849088,0.000089922934,0.0000383617,0.000022427113,0.00015733637,0.000048619688,0.0005730316],"genre_scores_gemma":[0.99518496,0.0014891159,0.0016895721,0.00005309302,0.000036075628,0.000054232478,0.00032454912,0.0000071135023,0.0011613311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999255,0.000012641005,0.0000052976516,0.000015095821,0.000016159705,0.000025312274],"domain_scores_gemma":[0.99991214,0.000009381857,0.00003865813,0.000008787606,0.0000069207304,0.000024202669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012329801,0.00040662428,0.00022069534,0.00017443385,0.00011045782,0.00019569634,0.00012249246,0.00014855547,0.0012787593],"category_scores_gemma":[0.00008999529,0.00013941363,0.00030691328,0.00008865196,0.0003617721,0.00021077752,0.00016089846,0.0007327072,0.00026953107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068455917,0.00004666683,0.0002254973,0.000052515585,0.0000058861547,0.000101436824,0.000017560433,0.000025896834,0.9979043,0.00008163132,0.00002868159,0.00082541007],"study_design_scores_gemma":[0.00016248827,0.0026149557,0.022980278,0.000024682038,0.000056648867,0.0010294913,0.00009077837,0.0012324683,0.97047484,0.00025288147,0.0010725582,0.00000788122],"about_ca_topic_score_codex":0.00023893801,"about_ca_topic_score_gemma":0.00053879974,"teacher_disagreement_score":0.0012787593,"about_ca_system_score_codex":0.00020701182,"about_ca_system_score_gemma":0.00025054315,"threshold_uncertainty_score":0.004277885},"labels":[],"label_agreement":null},{"id":"W2158014646","doi":"10.1189/jlb.0411183","title":"Nod-like receptors in intestinal homeostasis, inflammation, and cancer","year":2011,"lang":"en","type":"review","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; H2020 European Research Council; Howard Hughes Medical Institute; Canadian Association of Gastroenterology; Crohn's and Colitis Foundation of Canada; Institut Pasteur","keywords":"Biology; Inflammation; Homeostasis; Nod; Receptor; Cancer; Glucose homeostasis; Immunology; Cancer research; Cell biology; Diabetes mellitus; Endocrinology; Genetics","score_opus":0.04079395514719277,"score_gpt":0.31619110940795553,"score_spread":0.2753971542607628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158014646","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009696853,0.99817073,0.00013216084,0.0002538322,0.0003363099,0.000003520194,0.000008849032,0.000007802321,0.0009897626],"genre_scores_gemma":[0.0005570938,0.9975545,0.00019559645,0.00012626765,0.00030438387,0.000005884888,0.000022745775,0.0000012742205,0.0012323033],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99986076,0.000024790425,0.00001970063,0.000022332979,0.000055328925,0.000017126802],"domain_scores_gemma":[0.9998198,0.000050978204,0.000026688147,0.000006745079,0.000055922006,0.000039931558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054988416,0.0009493772,0.0012689697,0.0017690993,0.00036378737,0.000886883,0.0008470773,0.0011163125,0.0036954926],"category_scores_gemma":[0.0004386201,0.00024882937,0.0002922241,0.0020541218,0.00056390965,0.001415996,0.0007691801,0.0015008828,0.004399762],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010228397,0.00008015034,0.00020178428,0.0071756057,0.000040421255,0.00039583512,0.00006664058,0.00031548072,0.003587086,0.0044539967,0.05056666,0.93301404],"study_design_scores_gemma":[0.00001622093,0.0000639818,0.0007437406,0.0014058652,0.000025832034,0.0017365797,0.00005715837,0.000049969036,0.00035085564,0.0019553837,0.9935835,0.000010946184],"about_ca_topic_score_codex":0.00067750795,"about_ca_topic_score_gemma":0.001250419,"teacher_disagreement_score":0.0036954926,"about_ca_system_score_codex":0.0006125129,"about_ca_system_score_gemma":0.000821905,"threshold_uncertainty_score":0.012362659},"labels":[],"label_agreement":null},{"id":"W2158342892","doi":"10.1371/journal.ppat.1000500","title":"NOD2, RIP2 and IRF5 Play a Critical Role in the Type I Interferon Response to Mycobacterium tuberculosis","year":2009,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":286,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Peptidoglycan; IRF3; Biology; Mycobacterium tuberculosis; Interferon regulatory factors; Pattern recognition receptor; NOD2; IRF5; Microbiology; Interferon; Innate immune system; TLR2; Cell biology; Immune system; Bacteria; Tuberculosis; Immunology; Genetics; Medicine","score_opus":0.010749798597023939,"score_gpt":0.2475157043238006,"score_spread":0.23676590572677667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158342892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9791148,0.010413848,0.004735427,0.00042269443,0.00005122374,0.000022935823,0.00022768592,0.0001295918,0.0048818174],"genre_scores_gemma":[0.99401045,0.0016699154,0.0021859084,0.000056850968,0.000021757744,0.000015331101,0.0002508337,0.000012324796,0.0017765437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998722,0.000025064091,0.00001109312,0.000024975569,0.000028005634,0.00003866971],"domain_scores_gemma":[0.999926,0.000007421982,0.00002177798,0.000011905248,0.00000771335,0.000025082561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025516693,0.00039240316,0.00019590787,0.00015623258,0.00020541526,0.00040883373,0.00017551899,0.00030937837,0.0014257685],"category_scores_gemma":[0.00016262906,0.00014175358,0.00016267467,0.000084474224,0.00022796026,0.00034915903,0.00040009525,0.00040107494,0.00064784416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035334277,0.000028490236,0.0005689528,0.00006454853,0.0000036340296,0.00015677343,0.000012772646,0.000112912785,0.99299896,0.0003961826,0.00008343511,0.0052199936],"study_design_scores_gemma":[0.000097308824,0.0005501796,0.032637235,0.000059144357,0.000045567518,0.0028719264,0.00020391564,0.002826722,0.94927144,0.001111298,0.010308743,0.00001650129],"about_ca_topic_score_codex":0.00012801979,"about_ca_topic_score_gemma":0.00018136535,"teacher_disagreement_score":0.0014257685,"about_ca_system_score_codex":0.0002488251,"about_ca_system_score_gemma":0.00027425718,"threshold_uncertainty_score":0.004769683},"labels":[],"label_agreement":null},{"id":"W2158476520","doi":"10.1152/ajpregu.90335.2008","title":"Immune-to-brain signaling and central prostaglandin E<sub>2</sub>synthesis in fasted rats with altered lipopolysaccharide-induced fever","year":2008,"lang":"en","type":"article","venue":"American Journal of Physiology-Regulatory, Integrative and Comparative Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute","funders":"","keywords":"Endocrinology; Lipopolysaccharide; Internal medicine; Prostaglandin E2; Immune system; Cytokine; SOCS3; Hypothalamus; Inflammation; Prostaglandin; Central nervous system; Receptor; Cyclooxygenase; Hypothermia; Receptor antagonist; Tumor necrosis factor alpha; Innate immune system; Chemistry; Biology; Medicine; Antagonist; Immunology; Enzyme; Suppressor; Biochemistry","score_opus":0.017063749876221373,"score_gpt":0.24090079192881036,"score_spread":0.223837042052589,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158476520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981396,0.00047627083,0.0007683401,0.000079871876,0.000044897173,0.000021563275,0.00019854006,0.00004779416,0.00022307862],"genre_scores_gemma":[0.9940584,0.0008820694,0.0023837576,0.00016042267,0.000027151014,0.00016351466,0.0004973067,0.000045100143,0.001782289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987876,0.00002141436,0.000014847333,0.000029856197,0.000018675157,0.000036357844],"domain_scores_gemma":[0.9996468,0.000026276553,0.00011715665,0.00005870077,0.00003264863,0.000118468044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021209496,0.00088506716,0.0006604213,0.0006237185,0.00041213637,0.0003199095,0.00024419345,0.0004448801,0.0021593876],"category_scores_gemma":[0.0002768829,0.00041850054,0.00037674705,0.0002261748,0.0011031028,0.0006093163,0.0003381583,0.0012044699,0.0003262656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.016232053,0.0007161747,0.0018207154,0.00012843109,0.000047037473,0.0004567767,0.00016158304,0.0001968459,0.9740084,0.00025250626,0.00014066305,0.005838835],"study_design_scores_gemma":[0.0009637557,0.01736604,0.08040508,0.00006248923,0.00023068828,0.0015388513,0.00071245286,0.0031030679,0.89096177,0.00085452,0.0036872867,0.00011398039],"about_ca_topic_score_codex":0.0011036189,"about_ca_topic_score_gemma":0.0019052122,"teacher_disagreement_score":0.0021593876,"about_ca_system_score_codex":0.0005195017,"about_ca_system_score_gemma":0.00053478335,"threshold_uncertainty_score":0.0072238445},"labels":[],"label_agreement":null},{"id":"W2158602538","doi":"10.1002/eji.200838185","title":"TLR2 and TLR4 signaling shapes specific antibody responses to <i>Salmonella typhi</i> antigens","year":2009,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Universidad Nacional Autónoma de México; Consejo Nacional de Ciencia y Tecnología","keywords":"Biology; TLR2; Antigen; Salmonella typhi; TLR4; Immune system; Microbiology; Antibody; CD11c; Innate immune system; Immunology; Gene","score_opus":0.014079894004747953,"score_gpt":0.24612818029036249,"score_spread":0.23204828628561452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158602538","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959793,0.0007041758,0.0006377233,0.00009626516,0.000021998892,0.000009181958,0.00024213825,0.000052906442,0.0022562193],"genre_scores_gemma":[0.996234,0.00045730814,0.0005741709,0.00014186153,0.0000160761,0.00001630752,0.00034342724,0.00002015935,0.0021968037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998153,0.00003246488,0.000010450692,0.00002838694,0.000020814668,0.00009253579],"domain_scores_gemma":[0.99989724,0.0000136686085,0.00003088425,0.000005273679,0.000009762636,0.000043175452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010223519,0.00028578346,0.00020386619,0.00017233675,0.00009642958,0.00033413328,0.00009824535,0.0003264205,0.002185097],"category_scores_gemma":[0.00010139954,0.00018321033,0.00022939207,0.00006023932,0.00015899284,0.00019782982,0.00022080922,0.0005886085,0.00079007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003879865,0.000016820592,0.0006595689,0.000023427247,0.0000034671848,0.000029661569,0.000009591436,0.000062670064,0.9980002,0.000055861292,0.00006826739,0.0006824985],"study_design_scores_gemma":[0.00009149169,0.00080067856,0.06906816,0.000025296176,0.000066356966,0.0006054384,0.00023056661,0.0031323778,0.9210119,0.00024184014,0.00470945,0.000016440894],"about_ca_topic_score_codex":0.00039284703,"about_ca_topic_score_gemma":0.0005024059,"teacher_disagreement_score":0.002185097,"about_ca_system_score_codex":0.0002942538,"about_ca_system_score_gemma":0.00016206945,"threshold_uncertainty_score":0.0073099136},"labels":[],"label_agreement":null},{"id":"W2158737537","doi":"10.4049/jimmunol.181.10.7157","title":"NOD2-Deficient Mice Have Impaired Resistance to <i>Mycobacterium tuberculosis</i> Infection through Defective Innate and Adaptive Immunity","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":210,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; McGill University; Howard Hughes Medical Institute","keywords":"NOD2; Biology; Innate immune system; Immunity; Immunology; Mycobacterium tuberculosis; Acquired immune system; Immune system; Microbiology; Tuberculosis; Medicine; Pathology","score_opus":0.014076165929668878,"score_gpt":0.22956764894267986,"score_spread":0.215491483013011,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158737537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99422354,0.0010152104,0.0021382342,0.00018313756,0.00004293337,0.000033690205,0.0011081112,0.0002345593,0.0010205946],"genre_scores_gemma":[0.9882719,0.0007920935,0.0029740087,0.0001917551,0.00003091228,0.000097013886,0.0017760913,0.00011086521,0.0057553123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996799,0.000042654297,0.000048893835,0.000098584576,0.00005959292,0.00007041169],"domain_scores_gemma":[0.99954766,0.000025993566,0.0002078608,0.000032431624,0.000025920044,0.00016005308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020832894,0.0010848603,0.0004879318,0.00050963234,0.00016504059,0.0005586045,0.0002986541,0.00079023716,0.00198947],"category_scores_gemma":[0.00015754363,0.00044624138,0.00037473362,0.0001652582,0.00046541356,0.00043264634,0.00029634815,0.0011614431,0.00069883716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035605373,0.00007066322,0.0004855058,0.00003793231,0.000008464512,0.00013171129,0.0000127597195,0.00004198019,0.9982405,0.00005007605,0.000050327588,0.00051409856],"study_design_scores_gemma":[0.0002684523,0.0026771384,0.03798544,0.00004936504,0.00008288498,0.0052509913,0.00017804469,0.0018266408,0.94768554,0.00019130611,0.0037690732,0.000035133213],"about_ca_topic_score_codex":0.00031910714,"about_ca_topic_score_gemma":0.00052674336,"teacher_disagreement_score":0.00198947,"about_ca_system_score_codex":0.00028486727,"about_ca_system_score_gemma":0.00013776336,"threshold_uncertainty_score":0.0066555142},"labels":[],"label_agreement":null},{"id":"W2158766590","doi":"10.1124/jpet.104.072421","title":"Comparative Study of Glucocorticoids, Cyclosporine A, and JTE-607 [(-)-Ethyl-N-{3,5-dichloro-2-hydroxy-4-[2-(4-methylpiperazin-1-yl)ethoxy]benzoyl}-l-phenylalaninate Dihydrochloride] in a Mouse Septic Shock Model","year":2004,"lang":"en","type":"article","venue":"Journal of Pharmacology and Experimental Therapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Gambling Research Exchange Ontario; Shionogi; Cell Science Research Foundation","keywords":"Proinflammatory cytokine; Myeloperoxidase; Prednisolone; Medicine; Cytokine; Methylprednisolone; Pharmacology; Septic shock; Immunosuppression; Subcutaneous injection; Immunology; Sepsis; Internal medicine; Inflammation","score_opus":0.024253987002594356,"score_gpt":0.3307518109519031,"score_spread":0.30649782394930875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2158766590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99406505,0.0033670738,0.000678981,0.00019259959,0.00019941026,0.000055943085,0.00030223888,0.000077530596,0.0010611877],"genre_scores_gemma":[0.9940003,0.0025178632,0.0007138518,0.00009217913,0.0001389545,0.00006548696,0.00041977456,0.000017915778,0.0020335435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996697,0.000064691165,0.000025438956,0.000053138796,0.000052135558,0.00013503939],"domain_scores_gemma":[0.9995215,0.00006701936,0.000078656725,0.00005443982,0.000041625255,0.00023682608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004437302,0.0006568206,0.00090729207,0.0006664929,0.00031668166,0.00030644285,0.00053412694,0.0006968321,0.0013005524],"category_scores_gemma":[0.00034707936,0.00036188026,0.0008244291,0.0003726784,0.0007108648,0.0008272109,0.00016246602,0.001336847,0.0003343436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.029302176,0.0033223124,0.00096620136,0.0002457455,0.00014360754,0.00030071262,0.00009377547,0.00037301838,0.95581007,0.00027493466,0.00028674447,0.008880702],"study_design_scores_gemma":[0.0014296521,0.048458707,0.010134721,0.000020813755,0.00039233072,0.00039616533,0.00015447635,0.001267051,0.93558055,0.00012667506,0.0019986562,0.000040155697],"about_ca_topic_score_codex":0.001004467,"about_ca_topic_score_gemma":0.0021129118,"teacher_disagreement_score":0.0013005524,"about_ca_system_score_codex":0.00028717643,"about_ca_system_score_gemma":0.00070987776,"threshold_uncertainty_score":0.004350722},"labels":[],"label_agreement":null},{"id":"W2159085103","doi":"10.1093/ndt/gfn185","title":"Association between cytokine gene polymorphisms and outcomes in renal transplantation: a meta-analysis of individual patient data","year":2008,"lang":"en","type":"review","venue":"Nephrology Dialysis Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Haplotype; Transplantation; Meta-analysis; Internal medicine; Logistic regression; Genotype; Kidney transplantation; Human leukocyte antigen; Oncology; Immunology; Gene; Genetics; Biology","score_opus":0.0622405662913295,"score_gpt":0.2997662769525426,"score_spread":0.23752571066121309,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159085103","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035792515,0.9597859,0.001808368,0.00034892262,0.00021054267,0.00019150852,0.0014332789,0.000052088275,0.00037689172],"genre_scores_gemma":[0.7018965,0.2899944,0.003905882,0.00096424134,0.00027940885,0.0006875368,0.0018527202,0.000066226006,0.00035309236],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9849925,0.009229646,0.0029295913,0.0015396848,0.0009566956,0.00035179948],"domain_scores_gemma":[0.960559,0.03150598,0.0045043593,0.00166087,0.001437726,0.0003320196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01766374,0.0021957837,0.015447938,0.0045301085,0.0005277303,0.0031952003,0.0017780091,0.0019413689,0.001969117],"category_scores_gemma":[0.033961467,0.0013064743,0.0431956,0.0071998285,0.00064952363,0.001152846,0.0012752715,0.0017053239,0.00023574237],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002684677,0.000018047474,0.014381714,0.048166543,0.929395,0.00012948635,0.000039288665,0.000884698,0.00023627376,0.000056431374,0.0002793104,0.0037285222],"study_design_scores_gemma":[0.000459068,0.00015106073,0.0065921713,0.00270035,0.9890541,0.00008738981,0.000020532769,0.0002597047,0.0000787172,0.00014022182,0.000443691,0.000013115305],"about_ca_topic_score_codex":0.005350235,"about_ca_topic_score_gemma":0.007812739,"teacher_disagreement_score":0.01766374,"about_ca_system_score_codex":0.0014202083,"about_ca_system_score_gemma":0.0018566196,"threshold_uncertainty_score":0.09341586},"labels":[],"label_agreement":null},{"id":"W2159272038","doi":"10.4049/jimmunol.1302980","title":"SARM Regulates CCL5 Production in Macrophages by Promoting the Recruitment of Transcription Factors and RNA Polymerase II to the <i>Ccl5</i> Promoter","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Institute of Allergy and Infectious Diseases","keywords":"CCL5; Biology; TRIF; Transcription factor; Cell biology; Immune system; Gene; Innate immune system; Toll-like receptor; Immunology; T cell; Genetics; IL-2 receptor","score_opus":0.0134486454196404,"score_gpt":0.231637433934749,"score_spread":0.21818878851510862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159272038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926932,0.0022114187,0.0031432712,0.00011476859,0.000026417425,0.000025347503,0.00027418492,0.000080709906,0.001430689],"genre_scores_gemma":[0.99580425,0.0008537468,0.001835346,0.00005525448,0.000019955074,0.000024926436,0.00027905064,0.000013475392,0.0011139933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987733,0.000024441197,0.00001057826,0.000024083345,0.00002477467,0.000038743994],"domain_scores_gemma":[0.9999299,0.000008287064,0.000027698863,0.0000076930455,0.000010155615,0.00001634013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012889695,0.00026919667,0.00013962635,0.0001661381,0.0001309626,0.00021296227,0.00011743052,0.00014508827,0.0006709753],"category_scores_gemma":[0.000057582696,0.00007600834,0.00028130147,0.0000653171,0.00018585591,0.00012680847,0.0001605025,0.00025210186,0.00028510473],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000756992,0.0000088370225,0.00019899779,0.000030657873,0.0000012639736,0.000026487076,0.00000957906,0.000024926647,0.99908304,0.000034533736,0.000012621132,0.0004932552],"study_design_scores_gemma":[0.000019810357,0.0002834761,0.006390402,0.000007380631,0.000008552289,0.00012486488,0.000033252632,0.00044321705,0.9908695,0.00003879956,0.0017770046,0.0000037208645],"about_ca_topic_score_codex":0.00035379105,"about_ca_topic_score_gemma":0.0006845098,"teacher_disagreement_score":0.0006709753,"about_ca_system_score_codex":0.00027355496,"about_ca_system_score_gemma":0.00019552492,"threshold_uncertainty_score":0.0022445917},"labels":[],"label_agreement":null},{"id":"W2159323729","doi":"10.1016/j.jaci.2013.09.038","title":"Pattern recognition receptor-mediated cytokine response in infants across 4 continents⋆","year":2013,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Innate immune system; Immunology; Biology; Pattern recognition receptor; Immune system; Cytokine; Immunity; Acquired immune system; Stimulation; Neuroscience","score_opus":0.020190774855766976,"score_gpt":0.2991853995349722,"score_spread":0.2789946246792052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159323729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996449,0.00009517713,0.00004263869,0.000016628996,0.0000023270711,0.0000032549842,0.000047740683,0.0000017714857,0.00014561148],"genre_scores_gemma":[0.9994849,0.00009160275,0.00014427443,0.00004077555,0.0000032507753,0.000014826658,0.00011385338,0.0000018017611,0.00010477347],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973863,0.000096951946,0.00001769353,0.000055833007,0.000029577419,0.000061396335],"domain_scores_gemma":[0.99961346,0.00011006384,0.00012563608,0.000028437942,0.00007040297,0.000052066793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038201522,0.0003361252,0.00030834452,0.00034831857,0.00029870763,0.00030929345,0.00021557069,0.00032724437,0.0012376728],"category_scores_gemma":[0.0016413642,0.00016472928,0.00020378068,0.00027291672,0.00030634616,0.00021290967,0.00036188264,0.00026273285,0.00017029974],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005454783,0.00007764112,0.9744605,0.000050267758,0.00008108554,0.001122323,0.0014741813,0.00008630358,0.013803412,0.000040646697,0.00019902093,0.008059272],"study_design_scores_gemma":[0.0000045489846,0.00026733486,0.9971662,0.000008372418,0.000022071812,0.00083800405,0.0006743548,0.00007106979,0.00068503834,0.000020828908,0.00023956565,0.000002560796],"about_ca_topic_score_codex":0.0026284044,"about_ca_topic_score_gemma":0.0018721991,"teacher_disagreement_score":0.0026284044,"about_ca_system_score_codex":0.00030322393,"about_ca_system_score_gemma":0.00014536758,"threshold_uncertainty_score":0.005226195},"labels":[],"label_agreement":null},{"id":"W2159545888","doi":"10.4049/jimmunol.0903843","title":"CXCL1 Regulates Pulmonary Host Defense to <i>Klebsiella</i> Infection via CXCL2, CXCL5, NF-κB, and MAPKs","year":2010,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; National Jewish Health; National Institutes of Health; Louisiana State University; University of Toronto; Flight Attendant Medical Research Institute","keywords":"CXCL1; CXCL2; Chemokine; CXC chemokine receptors; Microbiology; CXCL5; Haematopoiesis; Immunology; Biology; Klebsiella pneumoniae; CXCR4; Chemokine receptor; Cell biology; Inflammation; Stem cell; Escherichia coli","score_opus":0.004683303466002854,"score_gpt":0.20679032353674554,"score_spread":0.2021070200707427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159545888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796158,0.009006462,0.003847067,0.00075566693,0.00008377698,0.000064725544,0.001044568,0.0004721279,0.0051097563],"genre_scores_gemma":[0.99030125,0.0026832835,0.0016285916,0.0002532138,0.00003586,0.00006552648,0.00067513506,0.000043302593,0.0043138834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977833,0.00004233941,0.0000152514485,0.0000341336,0.00003926457,0.00009068372],"domain_scores_gemma":[0.99984026,0.000009261036,0.000063419226,0.000007358657,0.000025174011,0.00005454939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015610005,0.00039444718,0.00018870151,0.00025239045,0.00020627865,0.0004853485,0.00016484132,0.00027052997,0.0020935275],"category_scores_gemma":[0.0001151048,0.00013014136,0.00025059737,0.00009751704,0.00030031902,0.00026160228,0.00021517681,0.00060688064,0.00058416004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000293392,0.000056578545,0.001606588,0.00013664387,0.0000064013866,0.00008467727,0.000039366045,0.00011596969,0.99351126,0.00023237722,0.00043653476,0.003480229],"study_design_scores_gemma":[0.00010323631,0.000796095,0.098311976,0.00011000657,0.00006892306,0.0011964862,0.00028438368,0.002738288,0.8817161,0.0002892243,0.014356895,0.000028459137],"about_ca_topic_score_codex":0.0010258674,"about_ca_topic_score_gemma":0.0011511127,"teacher_disagreement_score":0.0020935275,"about_ca_system_score_codex":0.0004793635,"about_ca_system_score_gemma":0.0003557705,"threshold_uncertainty_score":0.0070035458},"labels":[],"label_agreement":null},{"id":"W2159585370","doi":"10.1128/iai.01199-06","title":"Contribution of Phagocytosis and Intracellular Sensing for Cytokine Production by <i>Staphylococcus aureus</i> -Activated Macrophages","year":2006,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Biology; TLR2; NOD1; Phagocytosis; Muramyl dipeptide; TLR4; Peptidoglycan; Microbiology; Cytokine; Lipoteichoic acid; NOD2; Tumor necrosis factor alpha; Cell biology; Staphylococcus aureus; Receptor; Bacteria; Innate immune system; Immunology; Immune system; Signal transduction; Biochemistry","score_opus":0.005565924159064068,"score_gpt":0.21738374743403135,"score_spread":0.2118178232749673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159585370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99277425,0.0035425788,0.0018397351,0.0001402674,0.000040388528,0.000020561703,0.00011985457,0.000024028017,0.0014983052],"genre_scores_gemma":[0.9948266,0.0014075631,0.0018263254,0.00011597338,0.000038084076,0.00004639548,0.0002150703,0.000015010984,0.0015088121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996705,0.000102792415,0.000038382634,0.000052492465,0.000065695225,0.00007018195],"domain_scores_gemma":[0.9998474,0.0000360308,0.000030883915,0.00001711418,0.000030973762,0.00003750414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003455756,0.00047138255,0.00039093225,0.00015969358,0.00014350691,0.0004713853,0.00014179347,0.00040665877,0.00075544446],"category_scores_gemma":[0.00023862586,0.00015782751,0.0002143189,0.000068820074,0.00024651378,0.00026362887,0.00032864974,0.00037894197,0.00030172986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030166397,0.000016030033,0.00045426507,0.00006455565,0.0000039507463,0.00006862129,0.000008543906,0.00003586418,0.99818367,0.000056848425,0.00001725928,0.0007887468],"study_design_scores_gemma":[0.00005250532,0.0005153666,0.008521159,0.000024801,0.000042549993,0.0006960486,0.000074554104,0.0014720988,0.9864711,0.00015549114,0.0019644818,0.000009896137],"about_ca_topic_score_codex":0.00020220905,"about_ca_topic_score_gemma":0.00016591344,"teacher_disagreement_score":0.00075544446,"about_ca_system_score_codex":0.00022836728,"about_ca_system_score_gemma":0.00028227214,"threshold_uncertainty_score":0.002527237},"labels":[],"label_agreement":null},{"id":"W2159614117","doi":"10.1034/j.1399-6576.2003.00059.x","title":"Differential release of matrix metalloproteinase‐9 and nitric oxide following infusion of endotoxin to human volunteers","year":2003,"lang":"en","type":"article","venue":"Acta Anaesthesiologica Scandinavica","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Lipopolysaccharide; Nitric oxide; Nitrite; Sepsis; Matrix metalloproteinase; Zymography; Pharmacology; Anesthesia; Internal medicine; Immunology; Nitrate; Chemistry","score_opus":0.010111102558695299,"score_gpt":0.2483738591719381,"score_spread":0.2382627566132428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159614117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987816,0.00049450435,0.00037667205,0.00002809709,0.00002113647,0.00003243323,0.000052054038,0.000010481058,0.00020289145],"genre_scores_gemma":[0.99853384,0.0003346221,0.00039030917,0.00005835882,0.00003824718,0.00006348119,0.00016152127,0.0000052218875,0.0004143044],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998171,0.000051531282,0.000013161653,0.0000454965,0.0000430047,0.000029751636],"domain_scores_gemma":[0.99971133,0.000060407096,0.00008159708,0.00002707985,0.00003247293,0.00008711922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030928932,0.00038369466,0.0003601927,0.00014946496,0.00010807109,0.00027493865,0.000092865586,0.0002974674,0.0012197038],"category_scores_gemma":[0.0007332238,0.00015440342,0.00016538668,0.00008662214,0.000247985,0.00014983925,0.0001925063,0.0004367343,0.00035091364],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05140301,0.002391489,0.09215228,0.0002990379,0.0001034098,0.003081984,0.0007725588,0.00018368858,0.81561255,0.00010543852,0.0005995887,0.033294894],"study_design_scores_gemma":[0.0013000162,0.15910046,0.585462,0.0000698194,0.0002838906,0.010425084,0.0005537124,0.0018651633,0.23718706,0.00023701259,0.0034652553,0.000050544866],"about_ca_topic_score_codex":0.000091921196,"about_ca_topic_score_gemma":0.00007893417,"teacher_disagreement_score":0.0012197038,"about_ca_system_score_codex":0.00007446265,"about_ca_system_score_gemma":0.00011934237,"threshold_uncertainty_score":0.0040802956},"labels":[],"label_agreement":null},{"id":"W2159695093","doi":"10.4049/jimmunol.0803044","title":"Bacterial DNA Activates Endothelial Cells and Promotes Neutrophil Adherence through TLR9 Signaling","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"TLR9; CpG site; CpG Oligodeoxynucleotide; Biology; DNA; Toll-Like Receptor 9; Cell biology; CD18; Innate immune system; Molecular biology; Integrin; Gene; Immune system; Receptor; Immunology; Gene expression; DNA methylation; Biochemistry","score_opus":0.0120834512531173,"score_gpt":0.22881305131439636,"score_spread":0.21672960006127906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159695093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927458,0.0022270412,0.0021028817,0.000116285315,0.000033253826,0.000016229389,0.00016389381,0.00005289909,0.0025416482],"genre_scores_gemma":[0.9951833,0.0009527335,0.0013587708,0.00006907554,0.000013982515,0.0000140843895,0.00027126182,0.0000048364236,0.0021319133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998317,0.000043131182,0.0000089673,0.000019093914,0.000041610863,0.00005557814],"domain_scores_gemma":[0.9999169,0.00001961991,0.000020073618,0.000009468262,0.000013681357,0.000020228741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104547275,0.00017754576,0.00011468125,0.00016495358,0.00010368313,0.00025274037,0.000086105116,0.00019397239,0.0022104552],"category_scores_gemma":[0.00017111686,0.00008550258,0.00011998375,0.00007309651,0.00008745044,0.00013890355,0.00016747667,0.00033512004,0.0005291087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102674945,0.00003518207,0.00032014688,0.000031245298,0.0000029729053,0.00006832233,0.000010132426,0.000030916053,0.9967366,0.000095869276,0.000058382702,0.002507588],"study_design_scores_gemma":[0.00002831043,0.00046790217,0.0118781775,0.000017519536,0.000011264784,0.0003842898,0.00005668096,0.001516324,0.9825964,0.000120298384,0.0029181829,0.000004623517],"about_ca_topic_score_codex":0.0003539653,"about_ca_topic_score_gemma":0.0004991338,"teacher_disagreement_score":0.0022104552,"about_ca_system_score_codex":0.00018020817,"about_ca_system_score_gemma":0.00012486,"threshold_uncertainty_score":0.007394731},"labels":[],"label_agreement":null},{"id":"W2159816032","doi":"10.1007/s00441-010-1017-1","title":"Insights into the role of Toll-like receptors in modulation of T cell responses","year":2010,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cell biology; Acquired immune system; Biology; Innate immune system; Antigen-presenting cell; Immune system; T cell; Toll-like receptor; Natural killer T cell; Context (archaeology); Receptor; Immunology","score_opus":0.035328060357111134,"score_gpt":0.3417285118885732,"score_spread":0.3064004515314621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159816032","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012054096,0.99804556,0.00031839256,0.0003219199,0.00039767328,0.0000031969782,0.000012435399,0.000007269335,0.0007729099],"genre_scores_gemma":[0.0005972083,0.9978726,0.0003112289,0.00019983244,0.00041398485,0.0000049362875,0.000022420045,0.0000012258866,0.00057659385],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997634,0.000030215999,0.000031778636,0.000049276357,0.000096653865,0.000028549008],"domain_scores_gemma":[0.99959475,0.00017009936,0.000047361365,0.000018664832,0.00011335438,0.000055921948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010912077,0.0014647215,0.0017667591,0.0016248565,0.00027746853,0.0012587605,0.0014028295,0.0014103579,0.0024053496],"category_scores_gemma":[0.00074073044,0.00036204536,0.0004118952,0.0018662758,0.0010609946,0.0020772782,0.00090511783,0.0026933993,0.002805359],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018065992,0.00007658156,0.00015983998,0.009046907,0.00006363454,0.00026811592,0.000051793064,0.00052320166,0.011246835,0.0058447495,0.028116275,0.9444214],"study_design_scores_gemma":[0.000035311896,0.0000931092,0.0007946553,0.001534506,0.00007235305,0.0011360452,0.00007546392,0.00015748579,0.0019918773,0.004267546,0.98981434,0.000027342328],"about_ca_topic_score_codex":0.0007711459,"about_ca_topic_score_gemma":0.00120099,"teacher_disagreement_score":0.0024053496,"about_ca_system_score_codex":0.0010468265,"about_ca_system_score_gemma":0.0010521901,"threshold_uncertainty_score":0.008046687},"labels":[],"label_agreement":null},{"id":"W2160231689","doi":"10.1128/cvi.00080-06","title":"Immunotargeting with CD154 (CD40 Ligand) Enhances DNA Vaccine Responses in Ducks","year":2006,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canadian Liver Foundation; Canadian Association for the Study of the Liver","keywords":"CD154; CD40; DNA vaccination; Virology; DNA; Biology; Ligand (biochemistry); Immune system; Computational biology; Immunology; Genetics; Immunization; Receptor; In vitro","score_opus":0.011520313764422958,"score_gpt":0.2786205038236141,"score_spread":0.2671001900591911,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160231689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986846,0.00026214373,0.00045035876,0.000036397014,0.000012193031,0.000013979245,0.000059373695,0.000030905536,0.00044997473],"genre_scores_gemma":[0.99617094,0.0002626601,0.00092601066,0.000048809183,0.0000067463543,0.000022931972,0.00012996382,0.000008409981,0.002423513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998431,0.000022281529,0.000014063778,0.00004948472,0.000029104607,0.000041925225],"domain_scores_gemma":[0.99987936,0.000022834776,0.000035246852,0.000011348915,0.000012329062,0.000038935537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011612722,0.0002986168,0.00027958493,0.00024339503,0.00011805725,0.0002923972,0.00015104438,0.0003231754,0.00064486545],"category_scores_gemma":[0.00015343023,0.00012955842,0.0001831871,0.00006353606,0.00020720593,0.0002037426,0.0001328329,0.0004995855,0.00023190919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013881104,0.000051448627,0.00033615556,0.00002745911,0.000002894718,0.000035027842,0.000023063183,0.00006677825,0.9983228,0.000018219129,0.000017045082,0.00096036226],"study_design_scores_gemma":[0.000033458797,0.0021713416,0.010324087,0.000008495752,0.000022834636,0.00023251757,0.00007654917,0.0010692234,0.9847378,0.000029170536,0.00128687,0.000007630599],"about_ca_topic_score_codex":0.0013994217,"about_ca_topic_score_gemma":0.002099649,"teacher_disagreement_score":0.0013994217,"about_ca_system_score_codex":0.00059387734,"about_ca_system_score_gemma":0.00016511629,"threshold_uncertainty_score":0.0043088794},"labels":[],"label_agreement":null},{"id":"W2160591940","doi":"10.4049/jimmunol.169.11.6324","title":"GM-CSF Transgene-Based Adjuvant Allows the Establishment of Protective Mucosal Immunity Following Vaccination with Inactivated <i>Chlamydia trachomatis</i>","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McMaster University; BC Centre for Disease Control","funders":"","keywords":"Immunology; Immunization; Immune system; Biology; Immunity; Vaccination; Chlamydia trachomatis; Adjuvant; Virology","score_opus":0.010167009603948916,"score_gpt":0.20999726807960173,"score_spread":0.1998302584756528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160591940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931331,0.00089082075,0.0034774847,0.00015686074,0.000066946835,0.000061170555,0.0005748824,0.00019458307,0.001444079],"genre_scores_gemma":[0.99004984,0.0006071181,0.0055753454,0.000087312095,0.000019909738,0.00005471548,0.0009373137,0.000045962875,0.0026224535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999866,0.00001550834,0.0000124705875,0.00003127735,0.000029836803,0.00004484018],"domain_scores_gemma":[0.9998975,0.000013845859,0.000034132558,0.000011528931,0.0000097787315,0.000033249602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012488978,0.0003380239,0.00020445036,0.00021102809,0.0001025985,0.00026382424,0.0001969295,0.00035347466,0.0009740133],"category_scores_gemma":[0.00012105424,0.00012800319,0.00024307244,0.000099712335,0.00024668238,0.0001809613,0.00020785358,0.0008545003,0.00027847188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008629988,0.000028141454,0.000057986206,0.000023011993,0.0000015405876,0.00001766177,0.000007036786,0.000027652555,0.9989496,0.000045171462,0.000020824886,0.0007350682],"study_design_scores_gemma":[0.00001676923,0.0005401919,0.0015493704,0.000010809398,0.000013147768,0.00015166863,0.000009853611,0.00042890583,0.99532396,0.000022096072,0.0019307086,0.000002566407],"about_ca_topic_score_codex":0.00075656583,"about_ca_topic_score_gemma":0.001148448,"teacher_disagreement_score":0.0009740133,"about_ca_system_score_codex":0.00034210636,"about_ca_system_score_gemma":0.00033903355,"threshold_uncertainty_score":0.0032583475},"labels":[],"label_agreement":null},{"id":"W2160603335","doi":"10.4049/jimmunol.1102696","title":"The Importance of Adjuvant Formulation in the Development of a Tuberculosis Vaccine","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research & Development Corporation","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Adjuvant; Alum; Tuberculosis vaccines; Immune system; Emulsion; Immunology; Mycobacterium tuberculosis; Lipid A; Medicine; Tuberculosis; Pharmacology; Biology; Chemistry; Biochemistry; Lipopolysaccharide","score_opus":0.012208934343331543,"score_gpt":0.24962509812067307,"score_spread":0.23741616377734154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2160603335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8485694,0.068291575,0.07419427,0.0015680727,0.0008586238,0.0007103296,0.0002773376,0.00014485838,0.0053855665],"genre_scores_gemma":[0.91145855,0.027900515,0.05737977,0.00039071508,0.00025703016,0.00022533652,0.00024144276,0.00005017725,0.0020963284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994692,0.00021190726,0.00007547323,0.000060830847,0.00012951704,0.000053115527],"domain_scores_gemma":[0.99969816,0.000119165685,0.00007244706,0.000022818014,0.00006105206,0.000026380525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011365408,0.000469933,0.00042103813,0.0002386525,0.00016626329,0.00065914646,0.0002944233,0.0005782871,0.00047136552],"category_scores_gemma":[0.001097812,0.00021497832,0.00019237162,0.00019259921,0.00023457801,0.00073646393,0.00028666243,0.0009983691,0.00032079854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032665126,0.0002081949,0.0005934757,0.0004056432,0.000015419182,0.00006497868,0.000020281124,0.0016081528,0.9727286,0.00052753417,0.000086195316,0.023414887],"study_design_scores_gemma":[0.00009288365,0.0052754604,0.0017063444,0.00014784913,0.000093890216,0.00040686582,0.00005474077,0.0036567845,0.97400224,0.0007093375,0.013830006,0.000023462952],"about_ca_topic_score_codex":0.0002916769,"about_ca_topic_score_gemma":0.0005259858,"teacher_disagreement_score":0.0011365408,"about_ca_system_score_codex":0.00031729275,"about_ca_system_score_gemma":0.0005020124,"threshold_uncertainty_score":0.0060106516},"labels":[],"label_agreement":null},{"id":"W2161029954","doi":"10.1152/ajpheart.2000.278.3.h853","title":"LPS tolerance in human endothelial cells: reduced PMN adhesion, E-selectin expression, and NF-κB mobilization","year":2000,"lang":"en","type":"article","venue":"American Journal of Physiology-Heart and Circulatory Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Cell adhesion molecule; Lipopolysaccharide; Umbilical vein; Tumor necrosis factor alpha; E-selectin; Endothelial stem cell; Cell biology; Stimulation; Cytokine; Cell adhesion; Endothelial activation; Chemistry; Adhesion; CD14; Inflammation; Immunology; Molecular biology; Biology; Endocrinology; In vitro; Biochemistry; Flow cytometry","score_opus":0.006922859513515286,"score_gpt":0.2302551472883094,"score_spread":0.2233322877747941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161029954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99574584,0.0021752508,0.0013366569,0.00003719102,0.000025495303,0.000015742038,0.00012663694,0.000022912569,0.0005143859],"genre_scores_gemma":[0.99653566,0.0011656655,0.0009019293,0.00007491317,0.000014059361,0.000027753029,0.00036105877,0.0000054448356,0.0009135933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998803,0.000027880214,0.000015332575,0.000019706877,0.000030892006,0.000025885658],"domain_scores_gemma":[0.99991393,0.0000094591005,0.000032017182,0.000013013758,0.00001334876,0.000018200979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011379367,0.00029278046,0.00024683317,0.00011919952,0.00011269975,0.00030644986,0.00012322655,0.00024555647,0.0011208791],"category_scores_gemma":[0.00015193796,0.000107933294,0.00020197127,0.00013207635,0.00012834737,0.00016516652,0.00018668623,0.00037841345,0.00027178795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022697575,0.000063274856,0.00037469025,0.000042800966,0.0000071980803,0.0000876491,0.000021479173,0.00002268934,0.9975689,0.000029581022,0.00002245719,0.0015322268],"study_design_scores_gemma":[0.000047795438,0.0018949175,0.025217224,0.00001385258,0.00004246926,0.0010087666,0.00009040222,0.00048713447,0.96879846,0.00006551248,0.002325137,0.000008251473],"about_ca_topic_score_codex":0.00030234724,"about_ca_topic_score_gemma":0.00022178741,"teacher_disagreement_score":0.0011208791,"about_ca_system_score_codex":0.00011677805,"about_ca_system_score_gemma":0.000110653586,"threshold_uncertainty_score":0.0037496686},"labels":[],"label_agreement":null},{"id":"W2161035695","doi":"10.1086/590431","title":"A Functional Toll‐Like Receptor 8 Variant Is Associated with HIV Disease Restriction","year":2008,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Robert Koch Institut","keywords":"Biology; Immunology; Immune system; Innate immune system; Population; Toll-like receptor; Virus; Virology; Genotype; Receptor; Gene; Genetics; Medicine","score_opus":0.00871175158127363,"score_gpt":0.1955605802553104,"score_spread":0.18684882867403677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161035695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99907947,0.00021928981,0.00018287558,0.000055819983,0.000009653344,0.0000043003542,0.000084894644,0.000006534272,0.00035712525],"genre_scores_gemma":[0.9995116,0.000036622565,0.00018004731,0.000026408776,0.0000170992,0.000002595036,0.00008619293,0.0000037082734,0.0001357251],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997569,0.000073481664,0.00003283841,0.00007408801,0.00002598225,0.000036682522],"domain_scores_gemma":[0.9989849,0.00041449236,0.00032022677,0.00007206727,0.00006548391,0.00014279489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027650356,0.00047612155,0.0002671566,0.00038516056,0.00034486174,0.00031094262,0.0003140892,0.00063404057,0.004866004],"category_scores_gemma":[0.0011427852,0.00014723213,0.0002072654,0.00033442426,0.0002656699,0.00014203935,0.00020897313,0.00065901043,0.00032016364],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048318496,0.00035163717,0.87712395,0.0001254316,0.0003013729,0.007305581,0.00033605527,0.00024501068,0.09594879,0.000595977,0.0007535124,0.012080909],"study_design_scores_gemma":[0.0001744921,0.00110591,0.9365776,0.0000556673,0.00027922666,0.049461704,0.0002676471,0.0012152574,0.008547098,0.0007370202,0.0015504435,0.000027996724],"about_ca_topic_score_codex":0.00034934952,"about_ca_topic_score_gemma":0.00022341998,"teacher_disagreement_score":0.004866004,"about_ca_system_score_codex":0.00008009396,"about_ca_system_score_gemma":0.00008461152,"threshold_uncertainty_score":0.016278386},"labels":[],"label_agreement":null},{"id":"W2161583399","doi":"10.4049/jimmunol.1102991","title":"<i>Runx1</i> Deficiency in CD4+ T Cells Causes Fatal Autoimmune Inflammatory Lung Disease Due to Spontaneous Hyperactivation of Cells","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"RUNX1; Biology; Immunology; Immune system; Cytokine; Transcription factor; Autoimmunity; Cell biology; Cancer research; Gene; Genetics","score_opus":0.0066018044781931675,"score_gpt":0.2185111115205715,"score_spread":0.21190930704237834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2161583399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99348164,0.0010931356,0.002581076,0.00018334994,0.00006303977,0.00003345323,0.0007874788,0.00031048383,0.0014664533],"genre_scores_gemma":[0.9925051,0.0005413993,0.0021596483,0.0000974416,0.000042597592,0.000075493124,0.0013068795,0.00010372219,0.0031678134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974245,0.000039246694,0.000032564218,0.00005510833,0.000057066358,0.00007353472],"domain_scores_gemma":[0.99978215,0.000018456629,0.000083413346,0.000023660505,0.000014264313,0.00007806965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015193941,0.0007017466,0.00029976747,0.00035429734,0.00021486398,0.00032549322,0.00029126147,0.0004611102,0.0018418343],"category_scores_gemma":[0.00011822262,0.00022103566,0.0002889112,0.00016877551,0.00050888525,0.00018681497,0.00025752548,0.00086954434,0.00084764004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020421224,0.000025636593,0.0003353449,0.000020182913,0.000004393184,0.00010996679,0.0000063869866,0.000035594752,0.9984701,0.000055902357,0.00006541404,0.00066675147],"study_design_scores_gemma":[0.00008689858,0.0004998985,0.005763737,0.000009739156,0.000031236803,0.0013300517,0.0000444978,0.0007201054,0.9884941,0.00013391026,0.002878454,0.0000075070056],"about_ca_topic_score_codex":0.00034838248,"about_ca_topic_score_gemma":0.00045646707,"teacher_disagreement_score":0.0018418343,"about_ca_system_score_codex":0.00033535206,"about_ca_system_score_gemma":0.00021303396,"threshold_uncertainty_score":0.0061615705},"labels":[],"label_agreement":null},{"id":"W2162440799","doi":"10.4049/jimmunol.177.11.8008","title":"The IFN-Independent Response to Virus Particle Entry Provides a First Line of Antiviral Defense That Is Independent of TLRs and Retinoic Acid-Inducible Gene I","year":2006,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":108,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"McMaster University","keywords":"IRF3; Innate immune system; Biology; Interferon; Immune system; RIG-I; DNA virus; Pattern recognition receptor; Cell biology; Virology; Gene; Immunology; Genetics; Genome","score_opus":0.01165191766856267,"score_gpt":0.2296255357429352,"score_spread":0.21797361807437254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162440799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95033455,0.012608599,0.025120964,0.0006467878,0.00036259438,0.00021706782,0.0009084136,0.00027277318,0.009528228],"genre_scores_gemma":[0.9837077,0.0038316024,0.0071881404,0.00022012653,0.00011080391,0.00011755554,0.0005343077,0.000016549184,0.0042732363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996401,0.00007162086,0.0000322658,0.00008532192,0.00009967802,0.00007096685],"domain_scores_gemma":[0.9998559,0.000028425584,0.000032176664,0.000032940876,0.000020053565,0.00003054982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002740656,0.0005385433,0.00048598595,0.00024868207,0.00022539227,0.0005529064,0.00028475784,0.00054819416,0.001995267],"category_scores_gemma":[0.00019350465,0.00011390733,0.00046636327,0.00012623084,0.00048830494,0.00039202982,0.00036639388,0.0011399622,0.00065596757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012952197,0.000027103155,0.00035881012,0.000084527215,0.0000051002503,0.00013928955,0.000016527221,0.0000348194,0.99643034,0.00047234492,0.000046744204,0.0022550127],"study_design_scores_gemma":[0.000035650228,0.00051787123,0.00872661,0.000044628494,0.000020691057,0.0010444882,0.00007827945,0.0005718833,0.9814419,0.00058248267,0.006924073,0.000011339991],"about_ca_topic_score_codex":0.00020388971,"about_ca_topic_score_gemma":0.0002521372,"teacher_disagreement_score":0.001995267,"about_ca_system_score_codex":0.00036936227,"about_ca_system_score_gemma":0.00035455634,"threshold_uncertainty_score":0.006674826},"labels":[],"label_agreement":null},{"id":"W2162813051","doi":"10.1007/s10522-006-9067-1","title":"GM-CSF activates the Jak/STAT pathway to rescue polymorphonuclear neutrophils from spontaneous apoptosis in young but not elderly individuals","year":2006,"lang":"en","type":"article","venue":"Biogerontology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health and Social Services Centre University Institute of Geriatrics of Sherbrooke; Université de Sherbrooke","funders":"","keywords":"STAT protein; STAT5; Janus kinase; Granulocyte colony-stimulating factor; Granulocyte; STAT3; Granulocyte macrophage colony-stimulating factor; Apoptosis; Janus kinase 2; Immunology; Internal medicine; JAK-STAT signaling pathway; Medicine; Endocrinology; Signal transduction; Proinflammatory cytokine; Haematopoiesis; Granulocyte colony-stimulating factor receptor; Biology; Cytokine; Receptor; Inflammation; Cell biology; Chemotherapy; Biochemistry; Stem cell","score_opus":0.009094000131519528,"score_gpt":0.2106015671518303,"score_spread":0.20150756702031075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162813051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977787,0.0010327755,0.0004124589,0.000093863564,0.000038170834,0.000020662674,0.00010425025,0.000031402153,0.0004876575],"genre_scores_gemma":[0.9979371,0.00051540177,0.0004527718,0.00010398617,0.000031193857,0.000019097211,0.00017135953,0.000004986321,0.0007642168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995184,0.000008787352,0.0000048633624,0.000006085508,0.000009701207,0.000018789984],"domain_scores_gemma":[0.99993145,0.000011708137,0.000013874669,0.0000108619315,0.0000075821927,0.000024478884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013611873,0.00015335051,0.00025648187,0.00010857631,0.00008035598,0.00013007908,0.00010436708,0.00016649347,0.00075837044],"category_scores_gemma":[0.00021371673,0.00007213084,0.00016308468,0.000056248493,0.00010011382,0.00007009681,0.00013394175,0.0002764614,0.00024959398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006436563,0.00048135317,0.010666376,0.0001236621,0.000061806146,0.00086237164,0.0001306577,0.000126671,0.9386077,0.00014715338,0.0013068755,0.04104899],"study_design_scores_gemma":[0.0022109237,0.019097919,0.33267117,0.00012085637,0.00027179567,0.008263163,0.0003535835,0.0027114856,0.61629474,0.00056223996,0.01740302,0.000039023987],"about_ca_topic_score_codex":0.00043759754,"about_ca_topic_score_gemma":0.0007800537,"teacher_disagreement_score":0.00075837044,"about_ca_system_score_codex":0.00010032703,"about_ca_system_score_gemma":0.0001415607,"threshold_uncertainty_score":0.002537012},"labels":[],"label_agreement":null},{"id":"W2162883372","doi":"10.1002/pros.20694","title":"<i>TNF</i> polymorphisms and prostate cancer risk","year":2008,"lang":"en","type":"article","venue":"The Prostate","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"National Cancer Institute; National Institutes of Health","keywords":"Prostate cancer; Single-nucleotide polymorphism; Medicine; Oncology; Internal medicine; Cohort; Odds ratio; Prostate; Case-control study; Haplotype; Cancer; SNP; Cohort study; Risk factor; Biology; Genotype; Genetics","score_opus":0.008215493053257914,"score_gpt":0.21397945889884212,"score_spread":0.2057639658455842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162883372","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920089,0.004055651,0.0010639478,0.00034993832,0.00004505535,0.000026506103,0.0011492888,0.00004689476,0.001253699],"genre_scores_gemma":[0.9973621,0.0005600942,0.00090920326,0.000114191826,0.00009798917,0.000019524969,0.0006269285,0.0000095833475,0.00030042275],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995952,0.00012394438,0.00004009012,0.00013066278,0.00006833881,0.000041878397],"domain_scores_gemma":[0.9980895,0.0005923841,0.0009200983,0.000110518034,0.00012654917,0.00016089236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007171055,0.0003046778,0.00036004576,0.000338266,0.00018876397,0.0005314813,0.0002980363,0.0004330377,0.0025827314],"category_scores_gemma":[0.001816824,0.000120115736,0.0004033825,0.000642627,0.00023351025,0.00014699169,0.00016918023,0.00047249623,0.00028791223],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002650285,0.00007503267,0.98281384,0.00012313075,0.0010979465,0.00024804566,0.000055836066,0.00031288818,0.0054590683,0.000068081536,0.0004967797,0.006599013],"study_design_scores_gemma":[0.00022701909,0.0004952175,0.9922329,0.00005800506,0.001150915,0.0014875162,0.000037394242,0.00075845054,0.001852867,0.00035175492,0.0013363372,0.0000116565725],"about_ca_topic_score_codex":0.002209711,"about_ca_topic_score_gemma":0.0017944461,"teacher_disagreement_score":0.0025827314,"about_ca_system_score_codex":0.00025398174,"about_ca_system_score_gemma":0.00030009003,"threshold_uncertainty_score":0.0086401105},"labels":[],"label_agreement":null},{"id":"W2162972188","doi":"10.1139/o10-014","title":"Characterization of LRRFIP1","year":2010,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Phosphorylation; Biology; Serine; Lipopolysaccharide; Cell biology; Signal transduction; Receptor; Intracellular; Molecular biology; Biochemistry; Immunology","score_opus":0.0035782875104150252,"score_gpt":0.1934824542563216,"score_spread":0.18990416674590657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162972188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96260655,0.0059182537,0.018752798,0.00061908795,0.00010625613,0.00022749857,0.0067357607,0.00018591636,0.004847909],"genre_scores_gemma":[0.9084189,0.004768845,0.034599893,0.000462483,0.00012850059,0.0002818473,0.039214946,0.00022263767,0.011901937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998604,0.000012054769,0.000012220152,0.000035870675,0.000037890415,0.000041414347],"domain_scores_gemma":[0.99978465,0.000035849833,0.000046609188,0.000028256263,0.000051464885,0.000053191914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017712744,0.00048098838,0.00036152266,0.00044651772,0.0002888027,0.00035630865,0.00052869704,0.00036933162,0.0021490536],"category_scores_gemma":[0.00035854705,0.00015003284,0.00046260358,0.00038118198,0.00014992128,0.00029794683,0.00021101217,0.00072381244,0.0022436439],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004616815,0.000013707396,0.00022645274,0.000036111942,0.00000356306,0.00012921261,0.000014802936,0.000046200166,0.99820745,0.00007147772,0.0000721698,0.0011326503],"study_design_scores_gemma":[0.000022451191,0.00024974075,0.01691183,0.000027623868,0.000042838208,0.0025773777,0.00011121871,0.00201581,0.955381,0.00013429542,0.02250761,0.000018315954],"about_ca_topic_score_codex":0.00088863436,"about_ca_topic_score_gemma":0.000748668,"teacher_disagreement_score":0.0021490536,"about_ca_system_score_codex":0.00046856498,"about_ca_system_score_gemma":0.00018985911,"threshold_uncertainty_score":0.007189274},"labels":[],"label_agreement":null},{"id":"W2162983390","doi":"10.1378/chest.119.6.1724","title":"BAL Induces an Increase in Peripheral Blood Neutrophils and Cytokine Levels in Healthy Volunteers and Patients With Pneumonia","year":2001,"lang":"en","type":"article","venue":"CHEST Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital","funders":"","keywords":"Medicine; Volunteer; Saline; Cytokine; Granulocyte colony-stimulating factor; Bronchus; Pneumonia; Gastroenterology; Internal medicine; Tumor necrosis factor alpha; Peripheral; Interleukin 8; Granulocyte; Bronchoalveolar lavage; Immunology; Respiratory disease; Lung","score_opus":0.010385657960718988,"score_gpt":0.2277578358741958,"score_spread":0.2173721779134768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162983390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99879813,0.0004921944,0.000093985014,0.00004958404,0.000023788982,0.0000174918,0.000075818854,0.000008684971,0.00044032442],"genre_scores_gemma":[0.9991008,0.0001906956,0.0000712125,0.00009831552,0.000065821674,0.00002647848,0.00018562112,0.0000024489045,0.00025870992],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996227,0.00011583721,0.000036029985,0.00007379229,0.00007140792,0.00008033602],"domain_scores_gemma":[0.9991881,0.00023834055,0.00016147135,0.000044135937,0.00008261705,0.00028515566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029873557,0.0005399735,0.0008565428,0.00053635536,0.00051665946,0.00061030523,0.00018826894,0.0008848791,0.0021196392],"category_scores_gemma":[0.0015223244,0.00027079732,0.00020217859,0.0002258733,0.00039592132,0.00034250546,0.00038548786,0.0005256234,0.00054721034],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008621523,0.0011408615,0.91824853,0.00017125795,0.00009270933,0.005224134,0.0008955673,0.00006285207,0.05189147,0.00005424971,0.00059204444,0.013004848],"study_design_scores_gemma":[0.000083921164,0.0022675197,0.9922699,0.000014226808,0.000040786832,0.0032343708,0.00056423846,0.000105767074,0.0010944747,0.000053463784,0.00026299036,0.000008405447],"about_ca_topic_score_codex":0.00053086487,"about_ca_topic_score_gemma":0.00054101285,"teacher_disagreement_score":0.0021196392,"about_ca_system_score_codex":0.0001398338,"about_ca_system_score_gemma":0.00016563176,"threshold_uncertainty_score":0.0070908666},"labels":[],"label_agreement":null},{"id":"W2164010813","doi":"10.1086/432000","title":"Lipopolysaccharide: An Endotoxin or an Exogenous Hormone?","year":2005,"lang":"en","type":"review","venue":"Clinical Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lipopolysaccharide; Sepsis; Endogeny; Hormone; Receptor; Pathogenesis; Immunology; Medicine; Homeostasis; Biology; Cell biology; Microbiology; Endocrinology; Internal medicine","score_opus":0.11365976234597412,"score_gpt":0.4319449545448219,"score_spread":0.31828519219884777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164010813","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000055506465,0.99799573,0.0000689142,0.0005420655,0.0006014908,0.0000020681016,0.000004708336,0.000003975736,0.0007255506],"genre_scores_gemma":[0.0005261959,0.9971814,0.00008934175,0.00052996044,0.0005838261,0.000004164319,0.000011300227,0.0000011763041,0.0010726752],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998227,0.000039865845,0.000024222763,0.00003074518,0.000065089596,0.000017470064],"domain_scores_gemma":[0.99974483,0.000100714766,0.000035651683,0.000016591877,0.000055341556,0.000046887704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006705604,0.001099542,0.0019908538,0.0013324629,0.00032147916,0.0012735715,0.00108401,0.0020348527,0.0030926191],"category_scores_gemma":[0.0007233284,0.000260737,0.00030892983,0.001502926,0.0013751149,0.0023978986,0.0006249707,0.0021520518,0.004724179],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013196666,0.0000691054,0.00022204875,0.0077531026,0.00004532147,0.00049524585,0.00010995094,0.00011962969,0.0023116507,0.0074343868,0.05951745,0.9217901],"study_design_scores_gemma":[0.000016415464,0.000053705942,0.00034466747,0.0015412535,0.000022322707,0.0015081939,0.00007864902,0.00002152301,0.00031108694,0.002687754,0.9934048,0.000009667277],"about_ca_topic_score_codex":0.0008170518,"about_ca_topic_score_gemma":0.0009821417,"teacher_disagreement_score":0.0030926191,"about_ca_system_score_codex":0.0007385859,"about_ca_system_score_gemma":0.000847324,"threshold_uncertainty_score":0.010345817},"labels":[],"label_agreement":null},{"id":"W2164840648","doi":"10.1016/j.crohns.2014.04.004","title":"Novel de novo mutations of the interleukin-10 receptor gene lead to infantile onset inflammatory bowel disease","year":2014,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto","funders":"","keywords":"Missense mutation; Nonsense mutation; Medicine; Mutation; Peripheral blood mononuclear cell; Exon; Interleukin 12 receptor, beta 1 subunit; Inflammatory bowel disease; Immunology; Allele; Interleukin 10; Cytokine; Genetics; Disease; Gene; Biology; Internal medicine","score_opus":0.006357585158441707,"score_gpt":0.22816780032207118,"score_spread":0.22181021516362948,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2164840648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99619234,0.00069963414,0.0012444365,0.0002344355,0.000058235408,0.000027616916,0.000120591576,0.00006843184,0.0013543904],"genre_scores_gemma":[0.9978388,0.000271759,0.0009063892,0.00010410273,0.00005361029,0.000011475455,0.0000803932,0.00001870215,0.00071483763],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9996878,0.000062386905,0.00003460681,0.00007754807,0.0000581185,0.0000795894],"domain_scores_gemma":[0.9991949,0.00031654022,0.00023458393,0.000043010168,0.000043278113,0.00016776344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020658571,0.0011741342,0.00051919796,0.0006540773,0.0004097024,0.00038934135,0.00047218692,0.0014829554,0.0021968882],"category_scores_gemma":[0.001361127,0.0003312537,0.00040558557,0.00031328562,0.0005965337,0.0001975196,0.0004732411,0.0008645514,0.0004663446],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040733954,0.00015209935,0.031626035,0.00009686637,0.000050555685,0.91340387,0.00042002866,0.00016933137,0.047378786,0.000352192,0.00034316542,0.005599696],"study_design_scores_gemma":[0.000038899787,0.00035622978,0.043014072,0.000027259908,0.000060853996,0.946107,0.00011745958,0.00040659212,0.00816841,0.00010162991,0.0015840334,0.0000176238],"about_ca_topic_score_codex":0.00030066623,"about_ca_topic_score_gemma":0.00041400007,"teacher_disagreement_score":0.0021968882,"about_ca_system_score_codex":0.00024291557,"about_ca_system_score_gemma":0.00018853715,"threshold_uncertainty_score":0.0073493123},"labels":[],"label_agreement":null},{"id":"W2165026201","doi":"10.1159/000437330","title":"TNFAIP2 Inhibits Early TNFa-Induced NF-&amp;#954;B Signaling and Decreases Survival in Septic Shock Patients","year":2015,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Septic shock; Tumor necrosis factor alpha; Sepsis; Medicine; Cytokine; Gene; Minor allele frequency; Gene expression; Immunology; Downregulation and upregulation; Biology; Cohort; Internal medicine; Allele; Allele frequency; Genetics","score_opus":0.035504740215739336,"score_gpt":0.26501417619897816,"score_spread":0.2295094359832388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165026201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99836963,0.0008205278,0.00021225246,0.00008538904,0.000014965939,0.000008415002,0.0001320263,0.00002447809,0.0003323236],"genre_scores_gemma":[0.9985599,0.00024882623,0.0002541521,0.00009785735,0.000016183285,0.000013112976,0.00036886687,0.0000052362766,0.00043580533],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998925,0.00003363024,0.000014673704,0.000016072428,0.000020254423,0.000022945314],"domain_scores_gemma":[0.9998264,0.000027416487,0.000054141434,0.0000161635,0.000017981352,0.000058003567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023670204,0.00019346166,0.00042887332,0.00012237397,0.00013072617,0.000453699,0.0001286207,0.00014913654,0.0011916199],"category_scores_gemma":[0.0003982592,0.0000869759,0.00020703686,0.00014955677,0.00009247896,0.000109928544,0.00015308447,0.0004523661,0.0002606674],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03218137,0.0021081527,0.09631618,0.00029097428,0.0005026655,0.0005339731,0.00015796901,0.0006258133,0.7792817,0.00012805976,0.002267526,0.08560556],"study_design_scores_gemma":[0.0031437883,0.02186242,0.75938123,0.0000796435,0.000555293,0.0028499465,0.00031771912,0.00416438,0.19942823,0.00036973492,0.0078070736,0.000040528063],"about_ca_topic_score_codex":0.0002388692,"about_ca_topic_score_gemma":0.00035738692,"teacher_disagreement_score":0.0011916199,"about_ca_system_score_codex":0.00014060717,"about_ca_system_score_gemma":0.00013779424,"threshold_uncertainty_score":0.0039863586},"labels":[],"label_agreement":null},{"id":"W2165068682","doi":"10.1128/aac.47.12.3846-3852.2003","title":"Randomized, Single-Blind, Placebo-Controlled Studyof Topical Application of the Immune Response ModulatorResiquimod in HealthyAdults","year":2003,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Agonist; Placebo; Randomization; Medicine; Internal medicine; Gastroenterology; Antagonist; Dose-ranging study; Randomized controlled trial; Endocrinology; Receptor; Pathology; Double blind","score_opus":0.010712509660352297,"score_gpt":0.24968687274575577,"score_spread":0.23897436308540346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165068682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97281873,0.0062754806,0.002109808,0.00048800622,0.0014879042,0.013877056,0.0009945661,0.0002704532,0.001678076],"genre_scores_gemma":[0.9654134,0.0042135417,0.0046531516,0.0016051903,0.0013352765,0.015315242,0.00092014525,0.00004502331,0.006499137],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9986979,0.0004902995,0.0000940283,0.0003421466,0.00014832096,0.00022726254],"domain_scores_gemma":[0.9988662,0.0002746964,0.00020310706,0.00011315374,0.00017507622,0.00036782044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026018734,0.0020610373,0.0052276016,0.00071899116,0.00090024073,0.00094076945,0.0012026947,0.0024000178,0.0069302316],"category_scores_gemma":[0.0016126235,0.0012397671,0.0011109965,0.00053104147,0.0017994309,0.00096716377,0.00049401895,0.0021571603,0.0012110492],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9422867,0.03229259,0.00044248308,0.00075004,0.00041996763,0.000051457253,0.000047830785,0.0001337791,0.011232472,0.000056730085,0.0005269026,0.011758997],"study_design_scores_gemma":[0.75656486,0.23870671,0.002146425,0.000022393568,0.00028755213,0.00002549441,0.00002045127,0.00027003072,0.00094202615,0.000058210153,0.00093815895,0.00001765665],"about_ca_topic_score_codex":0.0008259038,"about_ca_topic_score_gemma":0.0015894216,"teacher_disagreement_score":0.0069302316,"about_ca_system_score_codex":0.0005209737,"about_ca_system_score_gemma":0.0012962205,"threshold_uncertainty_score":0.023183942},"labels":[],"label_agreement":null},{"id":"W2165181124","doi":"10.1200/jco.2007.12.5807","title":"Randomized Phase II Trial of a Toll-Like Receptor 9 Agonist Oligodeoxynucleotide, PF-3512676, in Combination With First-Line Taxane Plus Platinum Chemotherapy for Advanced-Stage Non–Small-Cell Lung Cancer","year":2008,"lang":"en","type":"article","venue":"Journal of Clinical Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":169,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University; Pfizer Pharmaceuticals; American Society of Clinical Oncology; Pfizer","keywords":"Medicine; Taxane; Chemotherapy; Internal medicine; Neutropenia; Clinical endpoint; Lung cancer; Oncology; Phases of clinical research; Gastroenterology; Surgery; Cancer; Urology; Breast cancer; Randomized controlled trial","score_opus":0.0432886893044225,"score_gpt":0.382074831658081,"score_spread":0.3387861423536585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165181124","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99106276,0.0012574367,0.0005570128,0.00050942146,0.00068592455,0.0038898815,0.00068990316,0.00010079126,0.001246922],"genre_scores_gemma":[0.9862532,0.001276185,0.0020236461,0.0008861535,0.0004942862,0.00419037,0.0010996616,0.000020274256,0.0037562433],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.999534,0.00026871997,0.000025074545,0.000070058224,0.00003702104,0.00006512718],"domain_scores_gemma":[0.99916065,0.00018641406,0.00018405436,0.0000748485,0.000051418738,0.00034267994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013943539,0.0016639861,0.002736247,0.0003822063,0.00037499794,0.0008562543,0.00088367803,0.0015706015,0.005517002],"category_scores_gemma":[0.0011969004,0.00079261017,0.0011333228,0.0003269902,0.0013614467,0.0008308601,0.0003427591,0.0028049934,0.0009846156],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.95563567,0.016725771,0.0005094356,0.00036935115,0.00041345763,0.000051851268,0.0000415457,0.0008245352,0.008995893,0.00010713168,0.00078157417,0.01554391],"study_design_scores_gemma":[0.8729274,0.12395587,0.00081582624,0.000012891084,0.00014923111,0.000041466552,0.000011223256,0.0004725217,0.0010124737,0.0000816621,0.0005085678,0.000010875495],"about_ca_topic_score_codex":0.00052780256,"about_ca_topic_score_gemma":0.0015827172,"teacher_disagreement_score":0.005517002,"about_ca_system_score_codex":0.00088225276,"about_ca_system_score_gemma":0.0015364175,"threshold_uncertainty_score":0.01845622},"labels":[],"label_agreement":null},{"id":"W2165413779","doi":"10.4049/jimmunol.175.7.4320","title":"TLR Signaling Tailors Innate Immune Responses in Human Microglia and Astrocytes","year":2005,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":730,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Microglia; TLR2; Proinflammatory cytokine; TLR3; Innate immune system; Cell biology; TLR4; Biology; Secretion; Toll-like receptor; Inflammation; Immunology; Signal transduction; Immune system; Endocrinology","score_opus":0.010157824056822914,"score_gpt":0.24398046038119334,"score_spread":0.23382263632437042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165413779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858446,0.006463467,0.002779978,0.00020147124,0.00005046787,0.00007853064,0.0007479499,0.000054609798,0.0037790216],"genre_scores_gemma":[0.9911793,0.0027704842,0.0023002382,0.00019314287,0.000048303726,0.00013748316,0.0010531549,0.000015022762,0.0023027766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996946,0.00006971768,0.000029188588,0.000038457863,0.00006766645,0.000100426194],"domain_scores_gemma":[0.99993455,0.000016687074,0.000014243703,0.000009603146,0.0000148768495,0.000010029843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029439328,0.00023917916,0.00020973205,0.00022883502,0.00015596376,0.00039272834,0.00009060441,0.0003488864,0.0016119959],"category_scores_gemma":[0.00020759054,0.00016326764,0.000330956,0.00018409712,0.00012958054,0.00015731232,0.00023632906,0.00032588822,0.0012256462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006186641,0.00004707428,0.0008516925,0.000083540566,0.0000065804556,0.00018135663,0.00004573273,0.00007532046,0.99516946,0.00007972743,0.0000941153,0.0027467718],"study_design_scores_gemma":[0.00015970162,0.0014024127,0.02776873,0.00008631095,0.000082033795,0.0025906574,0.00035959607,0.0019119927,0.95130223,0.00064454897,0.013664715,0.00002711195],"about_ca_topic_score_codex":0.00039055955,"about_ca_topic_score_gemma":0.00051718985,"teacher_disagreement_score":0.0016119959,"about_ca_system_score_codex":0.0001716889,"about_ca_system_score_gemma":0.0002622333,"threshold_uncertainty_score":0.0053927302},"labels":[],"label_agreement":null},{"id":"W2165586955","doi":"10.1186/1471-2164-8-421","title":"Identification of single nucleotide polymorphisms in bovine CARD15 and their associations with health and production traits in Canadian Holsteins","year":2007,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Biology; Single-nucleotide polymorphism; Identification (biology); Genetics; Computational biology; Genotype; Gene","score_opus":0.013962631713472957,"score_gpt":0.2192685604955071,"score_spread":0.20530592878203416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165586955","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99886984,0.00018154035,0.00016944984,0.000020519246,0.000002822797,0.0000059964764,0.00042314755,0.0000040637074,0.00032254824],"genre_scores_gemma":[0.9983535,0.00010765503,0.0004607674,0.000028603301,0.0000034125171,0.0000069364246,0.0005841245,0.000005125297,0.00044987552],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99938905,0.00005026882,0.000031347274,0.00022776777,0.00017342356,0.00012804267],"domain_scores_gemma":[0.999395,0.00015162035,0.00014761536,0.00003661529,0.00012718081,0.00014190562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007077293,0.00046247308,0.00035741212,0.0013080593,0.0010133451,0.0005369984,0.0007033247,0.000413538,0.0019061981],"category_scores_gemma":[0.00078739686,0.00018164882,0.0003352878,0.0013532464,0.0006147329,0.00010748467,0.00023911259,0.00034702226,0.00013603971],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007723652,0.000086448184,0.9722803,0.000038185655,0.00025239695,0.0006588116,0.00088723324,0.00024136681,0.016577423,0.0001323276,0.00030910256,0.007763901],"study_design_scores_gemma":[0.000010024894,0.000037042602,0.99894756,0.0000067949145,0.000047238533,0.00010665905,0.000115022114,0.00018513373,0.00022587151,0.000013386828,0.00030097697,0.0000042469737],"about_ca_topic_score_codex":0.55864394,"about_ca_topic_score_gemma":0.6090067,"teacher_disagreement_score":0.44135606,"about_ca_system_score_codex":0.002567923,"about_ca_system_score_gemma":0.0014379183,"threshold_uncertainty_score":0.8879106},"labels":[],"label_agreement":null},{"id":"W2165591553","doi":"10.1038/nature03308","title":"Integral role of IRF-5 in the gene induction programme activated by Toll-like receptors","year":2005,"lang":"en","type":"article","venue":"Nature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1009,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Proinflammatory cytokine; TLR4; Transcription factor; Interferon regulatory factors; Biology; Toll-like receptor; Cell biology; Innate immune system; IRF1; Signal transducing adaptor protein; TRIF; Immunology; Signal transduction; Cancer research; Immune system; Inflammation; Gene; Genetics","score_opus":0.0049737184922909955,"score_gpt":0.2263085999365825,"score_spread":0.2213348814442915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165591553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95274574,0.011596062,0.020804161,0.0010969046,0.00032863763,0.000042655603,0.0005589784,0.00027812397,0.012548705],"genre_scores_gemma":[0.99331737,0.0008128722,0.0030329688,0.00010906386,0.00004091182,0.000011330064,0.00031887586,0.000021907563,0.0023347118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996278,0.000069393165,0.000021254215,0.000052925327,0.00007989863,0.00014883702],"domain_scores_gemma":[0.99980444,0.00003618779,0.000035831163,0.00003718138,0.000030386349,0.00005598208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005401073,0.00036725364,0.0002921865,0.000328299,0.00043952983,0.0007467459,0.00039218008,0.00052016263,0.003116636],"category_scores_gemma":[0.00027559607,0.00024079642,0.00052831974,0.00013270491,0.00047494072,0.00071500655,0.00053216866,0.0010695817,0.0011515032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013124037,0.00007470868,0.0011080146,0.0001548016,0.000017531092,0.00028423645,0.000054894474,0.0004713892,0.98072827,0.004847965,0.00026918593,0.010676586],"study_design_scores_gemma":[0.00014013413,0.00055084564,0.023353986,0.00010659033,0.00008223696,0.0012266653,0.00026654865,0.0052085593,0.9526528,0.0055298894,0.010848552,0.00003319788],"about_ca_topic_score_codex":0.00029102218,"about_ca_topic_score_gemma":0.0004148255,"teacher_disagreement_score":0.003116636,"about_ca_system_score_codex":0.0005762233,"about_ca_system_score_gemma":0.00056008185,"threshold_uncertainty_score":0.010426164},"labels":[],"label_agreement":null},{"id":"W2165655956","doi":"10.1038/sj.embor.7401161","title":"NLRX1 is a mitochondrial NOD‐like receptor that amplifies NF‐κB and JNK pathways by inducing reactive oxygen species production","year":2008,"lang":"en","type":"article","venue":"EMBO Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":313,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Istituto Pasteur-Fondazione Cenci Bolognetti; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Cell biology; Reactive oxygen species; Biology; Mitochondrion; Kinase; Signal transduction; Mitochondrial ROS; Receptor; Intracellular; Biochemistry","score_opus":0.024325508332708252,"score_gpt":0.20964086837905296,"score_spread":0.18531536004634472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165655956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96768415,0.013380318,0.0126567045,0.0013988107,0.0002742149,0.00009025459,0.0007639086,0.0003410574,0.003410652],"genre_scores_gemma":[0.9798313,0.004568427,0.006750227,0.0002090707,0.00013341864,0.00007508114,0.0013770546,0.000026299113,0.0070292572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997979,0.000041575746,0.00002442164,0.000046034547,0.000055827,0.000034313223],"domain_scores_gemma":[0.99980503,0.000021103053,0.0000875637,0.000014783592,0.000022160315,0.000049369566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032430442,0.0004802441,0.00038831515,0.00025795033,0.00028704066,0.00052943255,0.00026212557,0.00045867282,0.0016172472],"category_scores_gemma":[0.0002003156,0.00016565798,0.0003712658,0.00014740112,0.00036239222,0.00054428563,0.0003516801,0.000706178,0.00078589324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006279945,0.000056292072,0.00065611186,0.00017815013,0.000016448523,0.0003912553,0.00002293875,0.00012489704,0.99265254,0.00032085134,0.00030465703,0.0046479004],"study_design_scores_gemma":[0.00018247012,0.0007803752,0.0072175977,0.000027720116,0.000054442768,0.003933927,0.00011335275,0.0015961922,0.9738463,0.00040984852,0.011816867,0.000020864045],"about_ca_topic_score_codex":0.00012535436,"about_ca_topic_score_gemma":0.00013755728,"teacher_disagreement_score":0.0016172472,"about_ca_system_score_codex":0.00047202042,"about_ca_system_score_gemma":0.00016944387,"threshold_uncertainty_score":0.005410254},"labels":[],"label_agreement":null},{"id":"W2165666169","doi":"10.1177/1073858404263494","title":"Glucocorticoids: Protectors of the Brain during Innate Immune Responses","year":2004,"lang":"en","type":"review","venue":"The Neuroscientist","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Microglia; Innate immune system; Neuroscience; Immune system; Neuroinflammation; Biology; Proinflammatory cytokine; Myeloid; Inflammation; Immunology","score_opus":0.021777212772709026,"score_gpt":0.2814429337922662,"score_spread":0.2596657210195572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165666169","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026765186,0.99820876,0.0001630943,0.00018657245,0.00024052203,0.0000027519634,0.000009163479,0.0000087478065,0.0009128564],"genre_scores_gemma":[0.0017682356,0.9964347,0.00021226294,0.00015598716,0.0002728306,0.0000063054963,0.000018865692,0.0000016118878,0.00112919],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998845,0.000022230874,0.0000173844,0.000022597998,0.000040977095,0.000012241792],"domain_scores_gemma":[0.99989367,0.00003228987,0.000020425572,0.0000053489184,0.000031442287,0.000016887594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027928068,0.000981998,0.0011674572,0.0012203441,0.00027413276,0.0007411696,0.00071262184,0.0012117698,0.0016119367],"category_scores_gemma":[0.00025853954,0.00021758258,0.0002646304,0.0011988202,0.0005000696,0.0010263231,0.0003589744,0.0012085509,0.0019050427],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015552109,0.000055769102,0.00033454664,0.00980043,0.000052970336,0.0007905311,0.00013440667,0.00038988914,0.0146472985,0.004588857,0.017310578,0.95173925],"study_design_scores_gemma":[0.000025861476,0.00012748891,0.0018934995,0.0011592715,0.000056779332,0.0029150988,0.0001370965,0.00006296424,0.0040926975,0.0028456782,0.9866644,0.000019037223],"about_ca_topic_score_codex":0.0008644719,"about_ca_topic_score_gemma":0.0013765877,"teacher_disagreement_score":0.0016119367,"about_ca_system_score_codex":0.0005629797,"about_ca_system_score_gemma":0.0006312088,"threshold_uncertainty_score":0.005392492},"labels":[],"label_agreement":null},{"id":"W2165723604","doi":"10.4049/jimmunol.181.2.1446","title":"Varying Importance of Soluble and Membrane CD14 in Endothelial Detection of Lipopolysaccharide","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Fondation pour la Recherche Médicale","keywords":"Lipopolysaccharide; CD14; Chemistry; Medicine; Biochemistry; Immunology","score_opus":0.011682327283790562,"score_gpt":0.2179908506949279,"score_spread":0.20630852341113734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165723604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957075,0.0010135695,0.002428293,0.000053406882,0.000014917964,0.000015335307,0.0000874607,0.000012136029,0.0006672949],"genre_scores_gemma":[0.9949955,0.0005847444,0.0030836645,0.00005997823,0.000009563352,0.000021167789,0.00021998164,0.000006279077,0.001019084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974436,0.000077428165,0.000028471248,0.00003533781,0.000058759375,0.000055660807],"domain_scores_gemma":[0.9998324,0.00003500986,0.00003088758,0.00002541722,0.00004452547,0.000031749536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002313972,0.00018870692,0.00016050112,0.00017402784,0.00010053543,0.00032548115,0.00015147014,0.00029486182,0.00089262996],"category_scores_gemma":[0.0002918363,0.000104996056,0.00013454672,0.00008855277,0.0001310368,0.0002129972,0.0001812217,0.00035622888,0.0002400212],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014003659,0.000015170002,0.00028511666,0.000016854521,0.000002156819,0.000016931075,0.0000045329334,0.000019506926,0.99871993,0.000046070512,0.000005746566,0.0007279827],"study_design_scores_gemma":[0.000014560236,0.00022625602,0.009143327,0.000008051746,0.000016595108,0.00020302842,0.000030515184,0.0011236155,0.9882633,0.00006406144,0.0009034029,0.0000032663309],"about_ca_topic_score_codex":0.00021009332,"about_ca_topic_score_gemma":0.0002653001,"teacher_disagreement_score":0.00089262996,"about_ca_system_score_codex":0.00018159098,"about_ca_system_score_gemma":0.00011449714,"threshold_uncertainty_score":0.0029861927},"labels":[],"label_agreement":null},{"id":"W2165872665","doi":"10.1161/01.res.88.5.491","title":"Lipopolysaccharide Internalization Activates Endotoxin-Dependent Signal Transduction in Cardiomyocytes","year":2001,"lang":"en","type":"article","venue":"Circulation Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Heart, Lung, and Blood Institute; Charles H. Hood Foundation","keywords":"Internalization; Cell biology; Endocytosis; Intracellular; Myocyte; Endosome; Lipopolysaccharide; Signal transduction; Extracellular; Biology; Colocalization; Cell; Biochemistry; Immunology","score_opus":0.05384352962681627,"score_gpt":0.33384892525532417,"score_spread":0.2800053956285079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2165872665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99395096,0.0011847288,0.0037701589,0.000075838725,0.000023267,0.000023033772,0.00006648353,0.00002393542,0.00088167185],"genre_scores_gemma":[0.9939746,0.0010206039,0.0035457683,0.00008258085,0.000018613884,0.00003455379,0.00029880396,0.000021260481,0.001003303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971145,0.00008413452,0.000020504478,0.000032205266,0.000068329944,0.00008334821],"domain_scores_gemma":[0.99986076,0.00004385205,0.000025977739,0.000021136215,0.000020660224,0.000027628012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003787498,0.00036768048,0.00032671227,0.00011005924,0.00014261805,0.00032105832,0.000117638316,0.0002787686,0.0010121516],"category_scores_gemma":[0.00028053657,0.00014715438,0.00033891192,0.0000682019,0.0002353848,0.00030686765,0.0003692899,0.00051634683,0.00039968832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007634821,0.000013607937,0.0001396868,0.00002521337,0.0000023888995,0.000061653845,0.000011782103,0.000031739375,0.9991379,0.00006469782,0.000008930961,0.00042598986],"study_design_scores_gemma":[0.00004855992,0.00061297545,0.007598789,0.000014942247,0.000020191463,0.0002955628,0.000049658705,0.0014778697,0.9888896,0.00009752949,0.0008863067,0.00000808957],"about_ca_topic_score_codex":0.0002133047,"about_ca_topic_score_gemma":0.0002620631,"teacher_disagreement_score":0.0010121516,"about_ca_system_score_codex":0.00025659535,"about_ca_system_score_gemma":0.0001872819,"threshold_uncertainty_score":0.003385961},"labels":[],"label_agreement":null},{"id":"W2166108789","doi":"10.1016/j.vetimm.2014.03.005","title":"Ovocalyxin-36 is an effector protein modulating the production of proinflammatory mediators","year":2014,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipopolysaccharide; Biology; Innate immune system; Immune system; Proinflammatory cytokine; Cell biology; Molecular biology; Inflammation; Microbiology; Immunology","score_opus":0.011152174182963126,"score_gpt":0.23219694317932324,"score_spread":0.2210447689963601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166108789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816305,0.013915862,0.002749385,0.00022257809,0.00005412667,0.0000561093,0.00039345052,0.00006017399,0.0009177928],"genre_scores_gemma":[0.99213296,0.0031637792,0.002123034,0.000096512864,0.000018124738,0.000019992161,0.00053044833,0.0000068264967,0.0019083014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999217,0.000011791155,0.0000046260902,0.000016631047,0.000019137618,0.000026037835],"domain_scores_gemma":[0.99993396,0.000004278634,0.000026037062,0.000002537527,0.000007792443,0.000025513256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000120152625,0.00043276578,0.00025157482,0.00022204957,0.00014264593,0.00015681554,0.000106197935,0.00028102566,0.0006101877],"category_scores_gemma":[0.00007981384,0.00006531031,0.00020882634,0.00014190694,0.00020930196,0.00014374466,0.0002414415,0.00033844486,0.000100011726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031774718,0.000023408626,0.0005439636,0.0000982611,0.0000067225196,0.00007825485,0.000009920508,0.000039286428,0.99602735,0.000054155327,0.00005504121,0.0027459443],"study_design_scores_gemma":[0.000077241384,0.0018088929,0.025782771,0.000046197336,0.000055202563,0.0012920655,0.000077509176,0.00074116344,0.9546048,0.00013608343,0.015362721,0.00001532411],"about_ca_topic_score_codex":0.0010329895,"about_ca_topic_score_gemma":0.00084041915,"teacher_disagreement_score":0.0010329895,"about_ca_system_score_codex":0.0003619106,"about_ca_system_score_gemma":0.0001791962,"threshold_uncertainty_score":0.002625823},"labels":[],"label_agreement":null},{"id":"W2166589167","doi":"10.1113/expphysiol.2006.033688","title":"Mifepristone (RU38486) influences the core temperature response of term pregnant rats to intraperitoneal lipopolysaccharide","year":2006,"lang":"en","type":"article","venue":"Experimental Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Antiglucocorticoid; Lipopolysaccharide; Endocrinology; Internal medicine; Glucocorticoid; Corticosterone; Medicine; Endogeny; Mifepristone; Antagonist; Gestation; Glucocorticoid receptor; Receptor; Pregnancy; Biology; Hormone","score_opus":0.009279717213356438,"score_gpt":0.2626611640761389,"score_spread":0.2533814468627824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166589167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970323,0.0011390792,0.0007083882,0.000108990585,0.000028612452,0.000020719646,0.00024110317,0.0000716963,0.00064912805],"genre_scores_gemma":[0.9948968,0.0015215728,0.0011877555,0.00008248314,0.000026121088,0.00008171692,0.00027829857,0.000017410852,0.0019078456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988747,0.000023344664,0.0000067536976,0.000026832182,0.000021285763,0.000034166573],"domain_scores_gemma":[0.99979323,0.00002545382,0.00009063061,0.000019113257,0.000010179727,0.00006152442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010740291,0.00037574454,0.00033269275,0.00020942972,0.0001090244,0.0001673453,0.000198343,0.00027614657,0.0010914864],"category_scores_gemma":[0.00025886414,0.00019298818,0.00019311409,0.00008778566,0.00038983792,0.00015374407,0.00014483352,0.00071254175,0.0003171627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034427082,0.00013912073,0.0006505849,0.00003945613,0.0000075405883,0.0001634463,0.000050792318,0.00008183681,0.99016917,0.000095168594,0.00007146775,0.0050888346],"study_design_scores_gemma":[0.00026331373,0.01309469,0.029459968,0.000021643606,0.000061118066,0.0008077443,0.00014035178,0.00095056795,0.9516207,0.00019552688,0.0033603958,0.00002398838],"about_ca_topic_score_codex":0.000587094,"about_ca_topic_score_gemma":0.0009281625,"teacher_disagreement_score":0.0010914864,"about_ca_system_score_codex":0.00024798384,"about_ca_system_score_gemma":0.00024055524,"threshold_uncertainty_score":0.0036513805},"labels":[],"label_agreement":null},{"id":"W2166790123","doi":"10.1128/iai.01029-08","title":"Role of NADPH Phagocyte Oxidase in Host Defense against Acute Respiratory <i>Acinetobacter baumannii</i> Infection in Mice","year":2008,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Phagocyte; Acinetobacter baumannii; Biology; Microbiology; NADPH oxidase; Respiratory burst; Immunology; Respiratory system; Respiratory infection; Host (biology); Macrophage; Phagocytosis; Bacteria; Reactive oxygen species; Pseudomonas aeruginosa; Biochemistry","score_opus":0.011687000563666835,"score_gpt":0.23210541395747802,"score_spread":0.22041841339381119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166790123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99030894,0.0030987521,0.0036399283,0.00045041836,0.00008105466,0.00008003964,0.0006097794,0.00018324541,0.0015477913],"genre_scores_gemma":[0.9921467,0.0012669644,0.0033403472,0.00019856873,0.0000255061,0.00013983503,0.00048271692,0.000036548525,0.0023628713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996362,0.000082054685,0.00003753156,0.000083143466,0.000066134315,0.00009492494],"domain_scores_gemma":[0.9997414,0.000017272487,0.00009321163,0.00002400079,0.000026986409,0.000097197924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039427236,0.00064258266,0.0003859133,0.00044237977,0.00024036862,0.0004987424,0.00036276918,0.0007391971,0.001062059],"category_scores_gemma":[0.00015257734,0.00031515164,0.0004069822,0.00012587254,0.00048516158,0.0004476445,0.0003002048,0.0013051156,0.00032485308],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010508267,0.00012073154,0.00060409226,0.00005697719,0.00000916939,0.00005897862,0.000025903479,0.00005812812,0.99657565,0.00016475031,0.00006304713,0.0012117282],"study_design_scores_gemma":[0.00017023674,0.0028551982,0.018847931,0.00005716722,0.0000673813,0.0006715584,0.00016040835,0.002017669,0.9712611,0.00026669446,0.0036019585,0.000022775099],"about_ca_topic_score_codex":0.00065222173,"about_ca_topic_score_gemma":0.00082969986,"teacher_disagreement_score":0.001062059,"about_ca_system_score_codex":0.00047116046,"about_ca_system_score_gemma":0.0003558146,"threshold_uncertainty_score":0.0035529733},"labels":[],"label_agreement":null},{"id":"W2166839443","doi":"10.1053/j.gastro.2009.12.008","title":"Neutrophil Migration During Liver Injury Is Under Nucleotide-Binding Oligomerization Domain 1 Control","year":2009,"lang":"en","type":"article","venue":"Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Institut Universitaire de France; European Regional Development Fund; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche","keywords":"NOD1; Phagocytosis; Immunology; Integrin alpha M; Liver injury; Inflammation; Chemistry; Tumor necrosis factor alpha; Receptor; Biology; Molecular biology; Cell biology; Innate immune system; NOD2; Endocrinology; Biochemistry","score_opus":0.005031844354036406,"score_gpt":0.20416134651776358,"score_spread":0.19912950216372716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166839443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928082,0.0026767626,0.0021571692,0.0004434114,0.00008373368,0.00001979875,0.00010370896,0.00006119039,0.0016460803],"genre_scores_gemma":[0.99673873,0.0005501955,0.00070441404,0.000094684285,0.00003334923,0.000029384038,0.0001308687,0.000010523756,0.001707773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965703,0.000075770804,0.000021804099,0.000054079523,0.00004928474,0.00014195609],"domain_scores_gemma":[0.99972445,0.0000302842,0.000112779766,0.000028165941,0.000037732705,0.00006660736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003650808,0.00022827345,0.00032278342,0.00030919205,0.00040487692,0.0006576997,0.00019980513,0.0004168671,0.0013831597],"category_scores_gemma":[0.00028735938,0.0001829049,0.00022086418,0.00012671517,0.00039812067,0.00039253166,0.00042580787,0.00055957306,0.0005026492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011301793,0.0000663734,0.0014064407,0.000045005334,0.0000063317125,0.00012965436,0.000077834506,0.00007488341,0.9921881,0.0005228097,0.0002762851,0.0040761274],"study_design_scores_gemma":[0.00013498825,0.0008706699,0.2644522,0.000065657776,0.00004475354,0.0010635257,0.0007763904,0.005196187,0.71941584,0.0015206409,0.006417472,0.0000416632],"about_ca_topic_score_codex":0.00029578223,"about_ca_topic_score_gemma":0.00068328227,"teacher_disagreement_score":0.0013831597,"about_ca_system_score_codex":0.00046579834,"about_ca_system_score_gemma":0.00024960446,"threshold_uncertainty_score":0.0046271086},"labels":[],"label_agreement":null},{"id":"W2166895287","doi":"10.1189/jlb.72.6.1234","title":"Regulation of gene expression in mouse macrophages stimulated with bacterial CpG-DNA and lipopolysaccharide","year":2002,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases; National Institutes of Health; American Heart Association","keywords":"TLR9; Biology; Toll-Like Receptor 9; CpG site; Innate immune system; Molecular biology; CpG Oligodeoxynucleotide; Gene; Cell biology; Gene expression; DNA methylation; Receptor; Genetics","score_opus":0.011681923855637452,"score_gpt":0.22262467749747278,"score_spread":0.21094275364183532,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2166895287","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98856926,0.0030757645,0.003472712,0.00017748534,0.00009406257,0.0000732739,0.0023007607,0.00010967892,0.002127107],"genre_scores_gemma":[0.9792962,0.0019940624,0.008178845,0.00022755552,0.000053530246,0.00048055805,0.0027036571,0.000058401863,0.007007135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995795,0.00006842807,0.00002843063,0.0001076039,0.0000833795,0.0001326075],"domain_scores_gemma":[0.9997205,0.00006684146,0.00006510089,0.00002783169,0.000041576015,0.000078091194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026665907,0.00042816703,0.0003575953,0.0007519861,0.00019679584,0.00033723624,0.0001526143,0.00042174774,0.0015663354],"category_scores_gemma":[0.00017596726,0.00022749431,0.00033152947,0.0004502806,0.0003970259,0.00021258715,0.00021674833,0.0007316396,0.0006440243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002281884,0.00002103332,0.00016436249,0.00002203386,0.0000029785256,0.000029025734,0.000014622864,0.000016704644,0.9990877,0.00004082758,0.000014316474,0.00035816355],"study_design_scores_gemma":[0.00002761076,0.00042477605,0.008505545,0.0000118081825,0.000017847142,0.00011870706,0.00005289441,0.00050721865,0.9892993,0.00010193652,0.0009255479,0.000006905422],"about_ca_topic_score_codex":0.0002569633,"about_ca_topic_score_gemma":0.00043274017,"teacher_disagreement_score":0.0015663354,"about_ca_system_score_codex":0.00027089828,"about_ca_system_score_gemma":0.00018492433,"threshold_uncertainty_score":0.0052398443},"labels":[],"label_agreement":null},{"id":"W2167548945","doi":"10.2353/ajpath.2009.090262","title":"Local Interleukin-1-Driven Joint Pathology Is Dependent on Toll-Like Receptor 4 Activation","year":2009,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Children's Hospital of Pittsburgh; Dutch Arthritis Association; Top Institute Pharma; McMaster University","keywords":"Inflammation; TLR2; TLR4; Tumor necrosis factor alpha; Immunology; Cytokine; Synovial joint; Receptor; Toll-like receptor; Arthritis; Rheumatoid arthritis; Medicine; Pathogenesis; Immune system; Pathology; Osteoarthritis; Innate immune system; Internal medicine","score_opus":0.009735932303561049,"score_gpt":0.2419007772694202,"score_spread":0.23216484496585915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167548945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9860183,0.0038874808,0.0048125912,0.00029917972,0.00018158891,0.00010772945,0.0003712086,0.00026125717,0.0040607885],"genre_scores_gemma":[0.9933542,0.00056353863,0.0020272704,0.000085955486,0.00006117776,0.000091335416,0.00026161384,0.000029994075,0.003524938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883336,0.00030719902,0.0001105345,0.00013855766,0.00021449181,0.00039600086],"domain_scores_gemma":[0.9992781,0.00008706387,0.00027481993,0.00011701118,0.000075456075,0.00016755739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049466005,0.0011472725,0.000649028,0.0008963507,0.00038515782,0.0008464181,0.00043493015,0.0006852206,0.004474703],"category_scores_gemma":[0.00053515483,0.00046809888,0.0007949432,0.00023687928,0.0006566803,0.00050322164,0.00092891575,0.0014881365,0.0018275777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039813248,0.00005512508,0.00036643154,0.000081624894,0.000007128761,0.00027207806,0.000017365772,0.00003704207,0.99760026,0.0001293079,0.00007740702,0.00095813186],"study_design_scores_gemma":[0.00030416934,0.001567983,0.05943839,0.00007736641,0.00011439206,0.0042472593,0.00031185723,0.0017316928,0.92852634,0.00069104147,0.0029490115,0.000040527182],"about_ca_topic_score_codex":0.00019740136,"about_ca_topic_score_gemma":0.00032093006,"teacher_disagreement_score":0.004474703,"about_ca_system_score_codex":0.00048762438,"about_ca_system_score_gemma":0.00035950934,"threshold_uncertainty_score":0.014969349},"labels":[],"label_agreement":null},{"id":"W2167636398","doi":"10.1161/01.res.0000144175.70140.8c","title":"Immune Cell Toll-Like Receptor 4 Is Required for Cardiac Myocyte Impairment During Endotoxemia","year":2004,"lang":"en","type":"article","venue":"Circulation Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canada Research Chairs","keywords":"Myocyte; TLR4; Cardiac myocyte; Internal medicine; Endocrinology; Lipopolysaccharide; Biology; Receptor; Medicine","score_opus":0.03203160317371804,"score_gpt":0.31022544350163955,"score_spread":0.2781938403279215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2167636398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962599,0.0012557737,0.0016842101,0.00012006178,0.000040370014,0.00003164825,0.00012346782,0.000034115,0.00045052203],"genre_scores_gemma":[0.9964915,0.00076483795,0.0012025948,0.00011409281,0.000031749365,0.000090074696,0.00023490924,0.000015989677,0.0010542555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996995,0.00008068133,0.000034372468,0.0000544246,0.00005465116,0.00007645788],"domain_scores_gemma":[0.99970204,0.000031028147,0.0001355007,0.00002754673,0.000028370841,0.000075462034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032152605,0.0004856662,0.00048137092,0.00029307287,0.00020087043,0.0002933001,0.00024828952,0.00049624353,0.0013247284],"category_scores_gemma":[0.0003032731,0.00020642288,0.0003914351,0.00010992509,0.00044452655,0.00028977133,0.00037733113,0.00092675735,0.00030203263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008055156,0.000048182104,0.0011021802,0.000053588312,0.000010066584,0.00028000318,0.000025799296,0.000029625648,0.996881,0.00003738353,0.00002596393,0.0007007451],"study_design_scores_gemma":[0.00022288921,0.0023822126,0.15860164,0.000056823388,0.00017443563,0.0021459702,0.00044376487,0.0018918735,0.8312615,0.00032719132,0.002468864,0.000022964832],"about_ca_topic_score_codex":0.00017027637,"about_ca_topic_score_gemma":0.0002002182,"teacher_disagreement_score":0.0013247284,"about_ca_system_score_codex":0.00022268329,"about_ca_system_score_gemma":0.00020423507,"threshold_uncertainty_score":0.0044317245},"labels":[],"label_agreement":null},{"id":"W2168078376","doi":"10.1165/rcmb.2007-0053oc","title":"Cigarette Smoke Exposure Attenuates Cytokine Production by Mouse Alveolar Macrophages","year":2007,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cigarette smoke; Cytokine; Alveolar macrophage; Immunology; Smoke; Macrophage; Medicine; Chemistry; In vitro; Biochemistry","score_opus":0.005096851341540982,"score_gpt":0.2337371249473685,"score_spread":0.22864027360582753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168078376","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996329,0.0020136992,0.00072604604,0.00008527775,0.000046649897,0.000026862486,0.00014198605,0.00004557221,0.0005849163],"genre_scores_gemma":[0.9933286,0.0020225998,0.0013325991,0.00016096885,0.000043260265,0.000079266065,0.0004125236,0.000021684982,0.002598571],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996971,0.00006832082,0.000029665198,0.000045913377,0.00008050935,0.00007851187],"domain_scores_gemma":[0.9998336,0.00002712263,0.00004716928,0.000020600757,0.000026219728,0.000045233774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027109156,0.0006039473,0.0004184489,0.00025695865,0.00013355557,0.00025265844,0.00018616363,0.00043739344,0.00080428895],"category_scores_gemma":[0.00015200693,0.00020090053,0.00033941877,0.000112450274,0.00021575554,0.00022089829,0.00020689853,0.0007797517,0.00036571184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005413989,0.00012416842,0.00040988342,0.0000285994,0.0000060532143,0.000045526445,0.000022110677,0.000025318823,0.99752265,0.00001402881,0.000022428196,0.0012377944],"study_design_scores_gemma":[0.00007633013,0.0039020695,0.01585708,0.00001959036,0.000049789327,0.00021360633,0.00006620996,0.00067388767,0.977827,0.000052873595,0.0012540789,0.0000073528054],"about_ca_topic_score_codex":0.00032208627,"about_ca_topic_score_gemma":0.0005358132,"teacher_disagreement_score":0.00080428895,"about_ca_system_score_codex":0.00013997107,"about_ca_system_score_gemma":0.00017566215,"threshold_uncertainty_score":0.0026905537},"labels":[],"label_agreement":null},{"id":"W2168532652","doi":"10.4049/jimmunol.179.7.4598","title":"Calcineurin Negatively Regulates TLR-Mediated Activation Pathways","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":104,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"Yale University","keywords":"TRIF; Calcineurin; TLR2; TLR3; Cell biology; Signal transducing adaptor protein; TLR4; Signal transduction; Innate immune system; Proinflammatory cytokine; Toll-like receptor; TLR9; Biology; Phosphorylation; Chemistry; Receptor; Immunology; Inflammation; Biochemistry; Transplantation; Medicine; Internal medicine","score_opus":0.013295723887815844,"score_gpt":0.23038629739061556,"score_spread":0.2170905735027997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168532652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.975047,0.016134115,0.0044807736,0.00030337082,0.00006783697,0.00003181809,0.00016611718,0.00013612893,0.0036327715],"genre_scores_gemma":[0.9945162,0.0030079624,0.0009999912,0.00005820766,0.000020789765,0.000013705805,0.000101702695,0.000011572913,0.0012698976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997696,0.00004117604,0.00002273224,0.000051399464,0.00007667962,0.000038382375],"domain_scores_gemma":[0.9998147,0.00003786495,0.00006823581,0.00001771306,0.000033505756,0.000028029728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018465985,0.00043732795,0.0002172596,0.00021896385,0.00022896836,0.00055157446,0.00030518885,0.00025622154,0.00063734065],"category_scores_gemma":[0.00018830843,0.000103938226,0.00021256707,0.00010650653,0.0004125194,0.00029600482,0.00026400265,0.00037856068,0.00018680072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008711825,0.000013457868,0.0004619591,0.0000499682,0.000007806753,0.000060692026,0.000015732867,0.000057683323,0.997291,0.0001825087,0.000031730204,0.001740261],"study_design_scores_gemma":[0.000020725554,0.000120685654,0.006954424,0.000013823152,0.000026297985,0.0004272592,0.000029906283,0.0011583358,0.98779976,0.00012802094,0.0033126248,0.00000810526],"about_ca_topic_score_codex":0.0007325805,"about_ca_topic_score_gemma":0.0008569044,"teacher_disagreement_score":0.0007325805,"about_ca_system_score_codex":0.0004348292,"about_ca_system_score_gemma":0.00026364974,"threshold_uncertainty_score":0.0031549335},"labels":[],"label_agreement":null},{"id":"W2168982702","doi":"10.1371/journal.pone.0050052","title":"Lipocalin 2 Regulates Inflammation during Pulmonary Mycobacterial Infections","year":2012,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University Health Network","funders":"University of Pittsburgh; National Institute of Allergy and Infectious Diseases; Children's Hospital of Pittsburgh; Medical Center, University of Pittsburgh; U.S. Public Health Service; National Heart, Lung, and Blood Institute","keywords":"Immunology; Mycobacterium tuberculosis; Chemokine; Inflammation; Tuberculosis; Biology; Granuloma; Lipocalin; Lung; Microbiology; Medicine; Pathology","score_opus":0.017958961924351317,"score_gpt":0.202140972811853,"score_spread":0.1841820108875017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168982702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99383587,0.003879634,0.0011337751,0.00018792646,0.00003397135,0.0000269873,0.00014154812,0.000078453944,0.00068176043],"genre_scores_gemma":[0.99689555,0.001112402,0.0008117067,0.00009835031,0.000026497702,0.00004058568,0.00015624844,0.000012915746,0.0008458246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980754,0.00003850669,0.000013896149,0.000035677116,0.000031905245,0.000072355906],"domain_scores_gemma":[0.99976784,0.000021974636,0.0000825765,0.000012264716,0.0000190469,0.00009630997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026934175,0.0004782517,0.0003738341,0.00027713933,0.00019613458,0.0004312994,0.00021487013,0.0005785421,0.00066012965],"category_scores_gemma":[0.00015644949,0.00014810429,0.00019502538,0.00015130601,0.0007348785,0.00041062283,0.00041242267,0.00072041294,0.0001493413],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044001115,0.000032894866,0.000364034,0.000043189004,0.0000022445115,0.000108336666,0.000017439554,0.00003359277,0.9984413,0.00005520566,0.000023082974,0.0004387091],"study_design_scores_gemma":[0.00023790341,0.001306662,0.04510801,0.000042342755,0.000048154085,0.00095725706,0.00015026705,0.0014542481,0.94745153,0.00032387773,0.0028987876,0.000021092648],"about_ca_topic_score_codex":0.00028255323,"about_ca_topic_score_gemma":0.0005140952,"teacher_disagreement_score":0.00066012965,"about_ca_system_score_codex":0.00051729043,"about_ca_system_score_gemma":0.00029958918,"threshold_uncertainty_score":0.0037532449},"labels":[],"label_agreement":null},{"id":"W2168997831","doi":"10.1186/cc1522","title":"Measurement of endotoxin activity in critically ill patients using whole blood neutrophil dependent chemiluminescence","year":2002,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":173,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Aptose Biosciences (Canada); University Health Network","funders":"","keywords":"Medicine; Sepsis; Intensive care unit; Leukocytosis; Lipopolysaccharide; Internal medicine; White blood cell; Critically ill; Bacteremia; Limulus amebocyte lysate; Intensive care; Gram-negative bacteria; Septic shock; Systemic inflammatory response syndrome; Whole blood; Immunology; Gastroenterology; Intensive care medicine; Antibiotics; Microbiology","score_opus":0.02734900890431694,"score_gpt":0.25410510934077835,"score_spread":0.2267561004364614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2168997831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987191,0.00044454058,0.00055878586,0.000035150195,0.0000064269316,0.000018476345,0.000058555866,0.000007591815,0.00015147547],"genre_scores_gemma":[0.9986218,0.00020552111,0.00087568205,0.000057870573,0.000024305391,0.0000326806,0.000142535,0.0000013559459,0.00003836197],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991605,0.00029019036,0.00011203466,0.00014666564,0.00019071427,0.0000998365],"domain_scores_gemma":[0.9981053,0.000456159,0.0009287995,0.00006529223,0.0001914998,0.00025298906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065530685,0.0003915706,0.00054712634,0.0005845312,0.00024566654,0.0005875405,0.00033126157,0.00044068,0.00067756965],"category_scores_gemma":[0.0025570067,0.00016859535,0.00019653313,0.00041020435,0.00044192033,0.00041209647,0.00040227635,0.0005557495,0.0001967812],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009514196,0.00019101464,0.98351157,0.000044437587,0.00003227152,0.00041319526,0.000136477,0.000073761345,0.009941239,0.000027871787,0.000099067416,0.0045777042],"study_design_scores_gemma":[0.000105441395,0.0031213025,0.98573387,0.000029398456,0.00006253711,0.003489742,0.0003067655,0.0011077549,0.005485775,0.00007255338,0.00046527604,0.0000194744],"about_ca_topic_score_codex":0.0004354375,"about_ca_topic_score_gemma":0.00032076886,"teacher_disagreement_score":0.00067756965,"about_ca_system_score_codex":0.00033185838,"about_ca_system_score_gemma":0.00022527626,"threshold_uncertainty_score":0.0034656525},"labels":[],"label_agreement":null},{"id":"W2169004039","doi":"10.1016/j.nutres.2014.08.012","title":"One-week high-fat diet leads to reduced toll-like receptor 2 expression and function in young healthy men","year":2014,"lang":"en","type":"article","venue":"Nutrition Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Alzheimer Society","keywords":"TLR2; Internal medicine; Endocrinology; CD14; Ex vivo; Peripheral blood mononuclear cell; Receptor; Toll-like receptor; Monocyte; Immune system; Chemistry; Biology; In vivo; TLR4; Immunology; Biochemistry; Medicine; Innate immune system; In vitro","score_opus":0.04175342194223638,"score_gpt":0.32188149107171904,"score_spread":0.2801280691294827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169004039","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996,0.00015930536,0.00004729008,0.000015804762,0.00001172328,0.000004685899,0.00004287846,0.00000597576,0.0001123652],"genre_scores_gemma":[0.9983217,0.00015390175,0.000068320325,0.000040637617,0.000013898011,0.000011273364,0.00011969568,0.0000041896956,0.0012662524],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998958,0.000022659306,0.000005925459,0.000027557167,0.000013125498,0.000034870824],"domain_scores_gemma":[0.99979025,0.00003436916,0.000040982417,0.000017579277,0.000014856117,0.00010191348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018852222,0.0004440992,0.0005514054,0.0005270467,0.00045876662,0.00046577593,0.00022949839,0.0005588926,0.0017138215],"category_scores_gemma":[0.0003069057,0.0006015564,0.0004241392,0.00028239327,0.00029685715,0.00026933377,0.00030382554,0.0004997253,0.00032889674],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.050123602,0.0063299183,0.5761682,0.00023902202,0.00051558565,0.0047985786,0.0010650844,0.00016053494,0.33605236,0.00013850344,0.0006721626,0.023736436],"study_design_scores_gemma":[0.00019257002,0.0035350798,0.9905428,0.000007225368,0.00017074219,0.0006729551,0.00031958523,0.00012825946,0.004152335,0.000038544025,0.00022591338,0.000014048265],"about_ca_topic_score_codex":0.00261763,"about_ca_topic_score_gemma":0.0021141022,"teacher_disagreement_score":0.00261763,"about_ca_system_score_codex":0.000156552,"about_ca_system_score_gemma":0.00016791462,"threshold_uncertainty_score":0.0057332516},"labels":[],"label_agreement":null},{"id":"W2169267616","doi":"10.3389/fimmu.2013.00333","title":"Functions of NOD-Like Receptors in Human Diseases","year":2013,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":317,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Nod; Receptor; Computational biology; Cell biology; Immunology; Biology; Medicine; Diabetes mellitus; Endocrinology; Internal medicine","score_opus":0.01567376907428547,"score_gpt":0.2622336879842472,"score_spread":0.2465599189099617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169267616","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000701892,0.992274,0.0005898673,0.0015920608,0.0007100293,0.000006700113,0.00006620195,0.000022995962,0.0040361234],"genre_scores_gemma":[0.013663946,0.9787481,0.001147994,0.0015026887,0.0019512529,0.000034480734,0.00023059054,0.000007626368,0.0027132814],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99962616,0.00012868225,0.000050095514,0.00005852884,0.00009163378,0.00004493249],"domain_scores_gemma":[0.9997094,0.00011782678,0.00006148103,0.000010806645,0.000058555826,0.00004189468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008079665,0.00055934343,0.00064117345,0.00066121964,0.00020843407,0.0007804515,0.00040367086,0.0008554983,0.0034367302],"category_scores_gemma":[0.00074002735,0.00009442695,0.00026577833,0.0008948211,0.0005777621,0.00063307653,0.00066023663,0.0009908411,0.0019016648],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004115183,0.000071361275,0.0022831364,0.009960908,0.00014721647,0.002211709,0.0002917228,0.00037729274,0.008327796,0.019131983,0.07438339,0.88240194],"study_design_scores_gemma":[0.000041268006,0.00010031852,0.0034648909,0.002333745,0.000075422766,0.0061553516,0.00011596482,0.00007844634,0.0008027582,0.006655855,0.9801588,0.000017164226],"about_ca_topic_score_codex":0.00027641183,"about_ca_topic_score_gemma":0.00026356807,"teacher_disagreement_score":0.0034367302,"about_ca_system_score_codex":0.00035942998,"about_ca_system_score_gemma":0.000576501,"threshold_uncertainty_score":0.01149708},"labels":[],"label_agreement":null},{"id":"W2169356861","doi":"10.4049/jimmunol.181.11.7925","title":"Nod2-Dependent Th2 Polarization of Antigen-Specific Immunity","year":2008,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":183,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Howard Hughes Medical Institute","keywords":"Muramyl dipeptide; NOD2; Immune system; Mediator; Biology; Acquired immune system; Immunology; Immunity; Inflammation; In vivo; Cell biology; Innate immune system; Genetics","score_opus":0.01620261538624658,"score_gpt":0.2210263675582634,"score_spread":0.20482375217201682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169356861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919121,0.0017921927,0.0021464042,0.0001177473,0.000052496187,0.000042268086,0.00015310437,0.000037634265,0.0037459505],"genre_scores_gemma":[0.9960989,0.0006111736,0.0010936701,0.0000679697,0.000024694893,0.000028177934,0.00016447184,0.000007553355,0.0019034169],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997718,0.00008049671,0.000014563059,0.000029418665,0.000043591313,0.000060151764],"domain_scores_gemma":[0.99992704,0.000009354301,0.000013686141,0.000012139678,0.000015246779,0.000022443526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033915415,0.0003225773,0.00014983954,0.00016651412,0.00015181775,0.0002789882,0.000072066556,0.000183639,0.0013316777],"category_scores_gemma":[0.00014619676,0.000100134646,0.0001390671,0.000082747865,0.00024596113,0.00021704202,0.00025218047,0.0004634733,0.0003486207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024493804,0.000037893413,0.001041589,0.000057528727,0.0000037305444,0.00015869866,0.000025290983,0.00007825391,0.99590516,0.00017454174,0.00007611367,0.0021962796],"study_design_scores_gemma":[0.000103073646,0.00080423563,0.022121262,0.000029828178,0.000018375942,0.0018829377,0.00017002854,0.0022424953,0.9653628,0.0005193985,0.0067354687,0.000009926207],"about_ca_topic_score_codex":0.00009669661,"about_ca_topic_score_gemma":0.00019683526,"teacher_disagreement_score":0.0013316777,"about_ca_system_score_codex":0.00014565089,"about_ca_system_score_gemma":0.00015107766,"threshold_uncertainty_score":0.0044549108},"labels":[],"label_agreement":null},{"id":"W2169908590","doi":"10.1128/iai.69.11.6942-6950.2001","title":"Dual Role of Lipopolysaccharide (LPS)-Binding Protein in Neutralization of LPS and Enhancement of LPS-Induced Activation of Mononuclear Cells","year":2001,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":239,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"Lipopolysaccharide; Lipopolysaccharide binding protein; Tumor necrosis factor alpha; Stimulation; Peripheral blood mononuclear cell; Acute-phase protein; Membrane; Lipid A; CD14; Biology; Bacterial outer membrane; Chemistry; Cell biology; Inflammation; Biochemistry; Immunology; In vitro; Receptor; Endocrinology","score_opus":0.011719562264393552,"score_gpt":0.2327624647379249,"score_spread":0.22104290247353134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2169908590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98223567,0.009382626,0.0058192173,0.00020183784,0.000072788054,0.00007463971,0.000094567564,0.00010803765,0.0020104377],"genre_scores_gemma":[0.9922293,0.0015283473,0.0045225946,0.00011078715,0.000050289815,0.00006512474,0.00014815404,0.000018815046,0.0013266045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994962,0.0002155445,0.000034774745,0.00004202483,0.00010112315,0.00011020343],"domain_scores_gemma":[0.9996942,0.00007510555,0.000052465286,0.000034261666,0.0000539773,0.000089979534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005027978,0.000618875,0.00048397545,0.00024208115,0.0001525238,0.0004025591,0.00020332671,0.00047149922,0.00096590037],"category_scores_gemma":[0.00034890184,0.00016248724,0.0002527107,0.000108628614,0.0004487624,0.0003085651,0.00046272422,0.0005682671,0.00048224189],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003289339,0.000037356414,0.00008753524,0.00005453073,0.000002722231,0.00004340679,0.000009522711,0.000022397491,0.9981541,0.00009842763,0.000010620597,0.0011504552],"study_design_scores_gemma":[0.00005109422,0.00073542487,0.0032476983,0.00001296662,0.0000195947,0.0004075558,0.000013961602,0.00051116763,0.9929408,0.000100944126,0.0019533022,0.0000054062807],"about_ca_topic_score_codex":0.00008798864,"about_ca_topic_score_gemma":0.00011362864,"teacher_disagreement_score":0.00096590037,"about_ca_system_score_codex":0.00019264696,"about_ca_system_score_gemma":0.00020150191,"threshold_uncertainty_score":0.0032312274},"labels":[],"label_agreement":null},{"id":"W2170149002","doi":"10.4049/jimmunol.169.4.2069","title":"Hypoxia Diminishes Toll-Like Receptor 4 Expression Through Reactive Oxygen Species Generated by Mitochondria in Endothelial Cells","year":2002,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Hypoxia (environmental); TLR4; Cell biology; Reactive oxygen species; Inflammation; Toll-like receptor; Biology; Mitochondrial ROS; Mitochondrion; Receptor; Signal transduction; Chemistry; Biochemistry; Immunology; Oxygen; Innate immune system","score_opus":0.015274969003005104,"score_gpt":0.21245391868892552,"score_spread":0.19717894968592042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170149002","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99124897,0.0045579746,0.002920352,0.00021972864,0.000038496164,0.000015824398,0.00018011784,0.000046350735,0.00077217753],"genre_scores_gemma":[0.9935469,0.0021595773,0.0019932839,0.00009404119,0.00002531275,0.000031233114,0.00034216433,0.000012188377,0.0017953151],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987805,0.000040270086,0.000012921469,0.000012422474,0.000024826295,0.000031619205],"domain_scores_gemma":[0.99988794,0.000026306514,0.00003728256,0.000012258319,0.000017633589,0.00001856881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016131399,0.00017417857,0.00020438623,0.00008945684,0.00009315561,0.00017405837,0.00012949246,0.00015670613,0.0012516213],"category_scores_gemma":[0.00019695616,0.00011381244,0.0001546135,0.000059525068,0.000097535914,0.00020967747,0.00010525107,0.0002912348,0.00022863767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020961877,0.000025491801,0.00018725275,0.00003561747,0.0000055059113,0.000028354832,0.000007842175,0.000024409965,0.99798465,0.000040570198,0.00004153154,0.0014091424],"study_design_scores_gemma":[0.000054279404,0.0011358052,0.01276851,0.000009554241,0.000027659853,0.0003249483,0.000035409423,0.00097330293,0.98195326,0.00008498339,0.0026283476,0.000003974347],"about_ca_topic_score_codex":0.0005228888,"about_ca_topic_score_gemma":0.00045626282,"teacher_disagreement_score":0.0012516213,"about_ca_system_score_codex":0.00017281395,"about_ca_system_score_gemma":0.00011077669,"threshold_uncertainty_score":0.0041870475},"labels":[],"label_agreement":null},{"id":"W2170261953","doi":"10.1111/j.1365-2141.2008.06999.x","title":"Toll‐like receptor 4 ligand can differentially modulate the release of cytokines by human platelets","year":2008,"lang":"en","type":"article","venue":"British Journal of Haematology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":137,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Platelet; Angiogenin; TLR4; Platelet activation; Cytokine; Receptor; Toll-like receptor; Monoclonal antibody; Lipopolysaccharide; Growth factor; Chemistry; Platelet-derived growth factor receptor; Biology; Cell biology; Molecular biology; Immunology; Biochemistry; Antibody; Cancer research; Innate immune system; Angiogenesis","score_opus":0.009058776191474764,"score_gpt":0.2116198140966306,"score_spread":0.20256103790515584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170261953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937064,0.0038515166,0.0010503916,0.00011882245,0.000032066597,0.00003419555,0.00017263637,0.000011880653,0.001022063],"genre_scores_gemma":[0.99509037,0.0017463336,0.0011587244,0.00010869784,0.000040642557,0.00006896878,0.0005471485,0.0000036989752,0.0012352987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984443,0.00006411709,0.000013335287,0.00001576112,0.00002468506,0.00003768275],"domain_scores_gemma":[0.9999578,0.000016496113,0.000008927122,0.000004837497,0.0000055959467,0.000006337036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015773815,0.0002034873,0.00013724506,0.00009603261,0.00005832674,0.0002416566,0.00008723265,0.00023788259,0.0012701077],"category_scores_gemma":[0.0002296444,0.00009641248,0.00016470824,0.00008722442,0.00007326001,0.00012867284,0.0001475153,0.00025829882,0.00035398116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007424602,0.00003910564,0.0005900443,0.00006865472,0.000010808657,0.00019824624,0.00002868343,0.000054359527,0.9950422,0.00006218523,0.00008092643,0.003082407],"study_design_scores_gemma":[0.000155448,0.002133157,0.020711359,0.000023598635,0.000073072304,0.0013034064,0.00008862482,0.00095918536,0.9691076,0.00013346391,0.0053015347,0.000009489064],"about_ca_topic_score_codex":0.00008821935,"about_ca_topic_score_gemma":0.00009908307,"teacher_disagreement_score":0.0012701077,"about_ca_system_score_codex":0.000075081625,"about_ca_system_score_gemma":0.00007331403,"threshold_uncertainty_score":0.0042489767},"labels":[],"label_agreement":null},{"id":"W2170726335","doi":"10.1113/expphysiol.2004.028613","title":"Pregnancy influences the plasma cytokine response to intraperitoneal administration of bacterial endotoxin in rats","year":2004,"lang":"en","type":"article","venue":"Experimental Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"","keywords":"Cytokine; Pregnancy; Medicine; Internal medicine; Endocrinology; Immunology; Biology","score_opus":0.010465561387723105,"score_gpt":0.2680799618029372,"score_spread":0.2576144004152141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170726335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99804795,0.00080574595,0.00057256187,0.000051297986,0.000016162192,0.0000107716805,0.00008924746,0.000021109165,0.00038510788],"genre_scores_gemma":[0.99608314,0.0013279542,0.00088385685,0.00008146502,0.000018142231,0.00005027633,0.00017676066,0.000011239507,0.0013670239],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984384,0.000043092234,0.000009363161,0.000043087963,0.000028772656,0.000031865562],"domain_scores_gemma":[0.99963284,0.000054140914,0.00017795584,0.000032977714,0.000021451153,0.00008069434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017561056,0.00033937246,0.00029306003,0.00020539627,0.00010812779,0.00025079458,0.000105798776,0.00022265909,0.00072475534],"category_scores_gemma":[0.00045310686,0.00024524506,0.00014546353,0.00008593155,0.00042361513,0.00020901638,0.0001738323,0.0006797593,0.00018147138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048796297,0.00017029063,0.0055611646,0.000052264484,0.000017042328,0.00041949062,0.00014623157,0.00008584377,0.9834552,0.00010817551,0.000058352303,0.0050463825],"study_design_scores_gemma":[0.00020189509,0.015005984,0.2078464,0.00004501015,0.00016263995,0.00208407,0.0004238755,0.0010256061,0.7696032,0.0004095519,0.003146431,0.00004527733],"about_ca_topic_score_codex":0.0004363121,"about_ca_topic_score_gemma":0.00067287043,"teacher_disagreement_score":0.00072475534,"about_ca_system_score_codex":0.00026363818,"about_ca_system_score_gemma":0.00022243141,"threshold_uncertainty_score":0.0024245977},"labels":[],"label_agreement":null},{"id":"W2170956534","doi":"10.1139/w07-094","title":"Possible requirement of intercellular adhesion molecule-1 for invasion of gingival epithelial cells by<i>Treponema medium</i>","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Treponema; Microbiology; Biology; Intercellular Adhesion Molecule-1; Treponema denticola; Intracellular; Bacteria; Molecular biology; Cell biology; Immunology; Porphyromonas gingivalis; Genetics","score_opus":0.011885555225308674,"score_gpt":0.22244402168843316,"score_spread":0.21055846646312448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170956534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960561,0.002041959,0.00075406407,0.00012423561,0.00001947186,0.000012088553,0.00010926,0.000017224807,0.0008656034],"genre_scores_gemma":[0.9980432,0.00055052974,0.0006871578,0.000036107962,0.000010721799,0.000025708636,0.00014929568,0.0000030301233,0.0004943251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998958,0.000016293825,0.00000650929,0.000015978158,0.000019411536,0.000045896755],"domain_scores_gemma":[0.9998933,0.00003432468,0.000023843542,0.00001116127,0.000015123405,0.000022244132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012619798,0.0001988738,0.00021585039,0.00016151252,0.00026550025,0.00047725183,0.00019023765,0.00034272054,0.0010983314],"category_scores_gemma":[0.00018291343,0.00013507079,0.00023764434,0.00008018199,0.00020440806,0.00031145383,0.00023539805,0.0004454485,0.0002339399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016092954,0.000016986132,0.00061641115,0.000048498016,0.000002047517,0.00021061375,0.000034616827,0.000012818944,0.99808216,0.000108031454,0.000029108814,0.0006777472],"study_design_scores_gemma":[0.00005671801,0.00037225996,0.05559703,0.000020940983,0.00003827907,0.001108124,0.00030927712,0.0014224877,0.9379498,0.00021254178,0.0028908812,0.000021786684],"about_ca_topic_score_codex":0.0008332029,"about_ca_topic_score_gemma":0.0008333939,"teacher_disagreement_score":0.0010983314,"about_ca_system_score_codex":0.00027116676,"about_ca_system_score_gemma":0.00019416983,"threshold_uncertainty_score":0.0036742687},"labels":[],"label_agreement":null},{"id":"W2171184503","doi":"10.1152/ajpgi.00462.2001","title":"Hepatic leukocyte recruitment in a model of acute colitis","year":2002,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Colitis; Intravital microscopy; Inflammation; Inflammatory bowel disease; Medicine; Immunology; Microcirculation; Internal medicine; Disease","score_opus":0.02305193215466554,"score_gpt":0.23691106755766303,"score_spread":0.2138591354029975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171184503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937577,0.002044411,0.0024217532,0.00011853182,0.00004301323,0.00008266754,0.00008774037,0.00009274932,0.0013514876],"genre_scores_gemma":[0.99318886,0.0015256671,0.0029189351,0.00011451608,0.00002759506,0.00010979922,0.00024271394,0.000012968299,0.00185894],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997694,0.00008778968,0.000014931613,0.000031400625,0.00004724719,0.000049390223],"domain_scores_gemma":[0.99982977,0.000030290483,0.000056757515,0.000023696226,0.000011220686,0.000048224032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025681147,0.000404952,0.00035425698,0.00038800878,0.00021441579,0.00022911775,0.00017139626,0.00032675805,0.001503812],"category_scores_gemma":[0.00018106728,0.00017462573,0.00020514181,0.00019378585,0.0003300539,0.0002148488,0.00022489125,0.00080692134,0.00030040063],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017205308,0.00054559356,0.0015701822,0.00014616284,0.000009445414,0.000647611,0.000059059857,0.00020337243,0.9908208,0.00017387967,0.0001193397,0.003983968],"study_design_scores_gemma":[0.0006229125,0.021684239,0.035047166,0.00010525532,0.00008878894,0.0064767743,0.00017842658,0.0052645076,0.9247183,0.00038140424,0.0054004267,0.00003181697],"about_ca_topic_score_codex":0.00032404793,"about_ca_topic_score_gemma":0.00065731775,"teacher_disagreement_score":0.001503812,"about_ca_system_score_codex":0.00031790588,"about_ca_system_score_gemma":0.0001679103,"threshold_uncertainty_score":0.005030811},"labels":[],"label_agreement":null},{"id":"W2171238188","doi":"10.1152/ajpheart.01194.2010","title":"Heterotrimeric G<sub>i</sub>/G<sub>o</sub>proteins modulate endothelial TLR signaling independent of the MyD88-dependent pathway","year":2011,"lang":"en","type":"article","venue":"American Journal of Physiology-Heart and Circulatory Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Heterotrimeric G protein; TLR3; Cell biology; TLR4; Signal transduction; MAPK/ERK pathway; TLR2; Toll-like receptor; Proinflammatory cytokine; Biology; G protein; Innate immune system; Chemistry; Receptor; Inflammation; Immunology; Biochemistry","score_opus":0.01128120589187924,"score_gpt":0.20159656489358063,"score_spread":0.19031535900170138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171238188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99511814,0.0017257772,0.0012691143,0.00027197527,0.000036937574,0.000017216451,0.00010569816,0.00004066141,0.0014146842],"genre_scores_gemma":[0.9963695,0.0011893456,0.0007077469,0.00020526123,0.000016331014,0.0000200378,0.00013029903,0.000010726096,0.0013507959],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990904,0.000020166714,0.000003227705,0.000009004811,0.000008949949,0.000049627026],"domain_scores_gemma":[0.99994874,0.000006193478,0.00001622921,0.000006147331,0.0000044990365,0.000018222923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008026408,0.00019761169,0.00012823017,0.00012548413,0.00009694877,0.00023092974,0.00017800073,0.00021583127,0.0010488944],"category_scores_gemma":[0.00010307194,0.00007738933,0.00017772954,0.000074978736,0.0002154361,0.00020586897,0.00020835697,0.00042890743,0.000446155],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059187907,0.000047417405,0.00027930777,0.000027331222,0.0000057205225,0.00005901619,0.000014196611,0.000056138942,0.9971192,0.00017589364,0.0001259902,0.0014980311],"study_design_scores_gemma":[0.00016799563,0.00073096633,0.034216292,0.000022997814,0.000050510178,0.000377443,0.00025976382,0.0023208417,0.957362,0.0006267133,0.0038568038,0.000007591682],"about_ca_topic_score_codex":0.00025306322,"about_ca_topic_score_gemma":0.00034487178,"teacher_disagreement_score":0.0010488944,"about_ca_system_score_codex":0.00018964346,"about_ca_system_score_gemma":0.00012115183,"threshold_uncertainty_score":0.0035089254},"labels":[],"label_agreement":null},{"id":"W2171598165","doi":"10.1128/aac.44.3.504-510.2000","title":"Consequences of Interaction of a Lipophilic Endotoxin Antagonist with Plasma Lipoproteins","year":2000,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Very low-density lipoprotein; Potency; Chylomicron; Lipoprotein; Chemistry; Cholesterol; Intermediate-density lipoprotein; High-density lipoprotein; Pharmacology; Endocrinology; In vitro; Internal medicine; Biochemistry; Biology; Medicine","score_opus":0.009171403560192715,"score_gpt":0.22922590169268295,"score_spread":0.22005449813249023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171598165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977133,0.00087809475,0.000847966,0.00003726255,0.000009941338,0.000008984043,0.000025187821,0.000011169962,0.00046799995],"genre_scores_gemma":[0.99847764,0.0003285711,0.0004611533,0.00005310323,0.000009620481,0.00000699983,0.00006399867,0.000004872057,0.00059409306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999567,0.00021625591,0.000024651656,0.000044853965,0.00005246071,0.000094762254],"domain_scores_gemma":[0.9997948,0.00008099835,0.000046693967,0.000020234955,0.000020830106,0.00003648174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034147277,0.00033998484,0.00028443683,0.00011963918,0.00015718711,0.00035455448,0.00015739063,0.00042915504,0.0009750708],"category_scores_gemma":[0.00046855691,0.00013175647,0.00017292768,0.00008578303,0.00020611528,0.00014172061,0.00023273629,0.0003118157,0.00033939627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016538489,0.00009113196,0.0006425493,0.000030463321,0.000022212304,0.0003193974,0.000027371312,0.00015706956,0.993658,0.00010849076,0.00003907206,0.0032503945],"study_design_scores_gemma":[0.00006141011,0.0036140487,0.0067674,0.000009546803,0.00004293893,0.0012114948,0.000059372247,0.0014282127,0.9850535,0.000044388737,0.0016978481,0.000009796322],"about_ca_topic_score_codex":0.0005526411,"about_ca_topic_score_gemma":0.0002844382,"teacher_disagreement_score":0.0009750708,"about_ca_system_score_codex":0.00016189275,"about_ca_system_score_gemma":0.0001500669,"threshold_uncertainty_score":0.0032619238},"labels":[],"label_agreement":null},{"id":"W2171680781","doi":"10.1002/ibd.20124","title":"Contribution of the NOD1/CARD4 insertion/deletion polymorphism +32656 to inflammatory bowel disease in Northern Europe#","year":2007,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Medical Research Council; Karolinska Institutet; Action Medical Research; Svenska Läkaresällskapet; Wellcome Trust","keywords":"NOD1; Inflammatory bowel disease; NOD2; Genotype; Allele; Ulcerative colitis; Haplotype; Odds ratio; Medicine; Crohn's disease; Immunology; Case-control study; Biology; Genetics; Disease; Internal medicine; Gene","score_opus":0.005279475003378817,"score_gpt":0.21328118954520803,"score_spread":0.2080017145418292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2171680781","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99845433,0.0004353078,0.00008885712,0.00006912384,0.0000071915297,0.0000051062884,0.00012929758,0.0000045658776,0.0008062343],"genre_scores_gemma":[0.99920744,0.0002199337,0.000104828425,0.00003868194,0.00001302339,0.0000066015637,0.00017320097,0.0000032377336,0.00023310383],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992899,0.0002610521,0.00008342413,0.0002147446,0.00008020724,0.00007077906],"domain_scores_gemma":[0.9995167,0.00013542002,0.00015632853,0.0000562823,0.000054175736,0.00008107604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009935177,0.00038433055,0.00048570507,0.0007751376,0.0006844192,0.00063189055,0.00025591004,0.0004028324,0.0026500192],"category_scores_gemma":[0.0018601977,0.00021867947,0.00036292293,0.0009266435,0.0003709624,0.00014048709,0.00069570635,0.00022404394,0.00033750467],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015267887,0.000119534365,0.97014374,0.00011411794,0.0003260756,0.003121872,0.0010606245,0.00035199575,0.004219464,0.00023260861,0.00052474777,0.01825841],"study_design_scores_gemma":[0.00004033949,0.000088191766,0.99578387,0.00004000931,0.00010459078,0.002352378,0.0002930181,0.00013877318,0.00018209981,0.000115599876,0.0008547811,0.0000062939002],"about_ca_topic_score_codex":0.013113246,"about_ca_topic_score_gemma":0.008961016,"teacher_disagreement_score":0.013113246,"about_ca_system_score_codex":0.000320708,"about_ca_system_score_gemma":0.00027731195,"threshold_uncertainty_score":0.026073873},"labels":[],"label_agreement":null},{"id":"W2172133313","doi":"10.1128/iai.00287-07","title":"Interleukin 18 Participates in the Early Inflammatory Response and Bacterial Clearance during Pneumonia Caused by Nontypeable <i>Haemophilus influenzae</i>","year":2007,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Haemophilus influenzae; Immunology; Biology; Pneumonia; Innate immune system; Chemokine; Cytokine; Proinflammatory cytokine; Immune system; Microbiology; Bacterial pneumonia; Respiratory tract; Respiratory system; Inflammation; Medicine; Antibiotics; Internal medicine","score_opus":0.01243172315300853,"score_gpt":0.24766616337036063,"score_spread":0.2352344402173521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2172133313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99329984,0.0037044862,0.0019318992,0.00010963978,0.0000450972,0.000017811768,0.00017067863,0.000074015676,0.00064640207],"genre_scores_gemma":[0.9950093,0.0017375093,0.0015983904,0.00004624999,0.000041555715,0.000035327932,0.00023531445,0.000023841532,0.0012725631],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978596,0.00004906148,0.000021455913,0.000029897245,0.000040601044,0.00007297407],"domain_scores_gemma":[0.9996182,0.00003414109,0.00017297927,0.000026193688,0.000047459147,0.000101063175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023540187,0.0005012292,0.0003065676,0.00027361154,0.00012247938,0.00032265022,0.00013285811,0.00032043052,0.0009255061],"category_scores_gemma":[0.00024362301,0.0001915761,0.00025359797,0.000086434506,0.00032632874,0.0003622691,0.00020182286,0.0006193491,0.0004043768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011178905,0.00005466837,0.0020401007,0.00006743063,0.0000048823345,0.0003657509,0.00003765779,0.000037975915,0.993374,0.0000980141,0.00006957575,0.0027321405],"study_design_scores_gemma":[0.00014050794,0.002165583,0.10678067,0.00006836065,0.00008049562,0.0042529283,0.00021010528,0.0012360095,0.8800457,0.00039627872,0.0046059736,0.000017383647],"about_ca_topic_score_codex":0.0001284311,"about_ca_topic_score_gemma":0.00017447777,"teacher_disagreement_score":0.0009255061,"about_ca_system_score_codex":0.00019474943,"about_ca_system_score_gemma":0.00018663799,"threshold_uncertainty_score":0.0030961633},"labels":[],"label_agreement":null},{"id":"W2176227514","doi":"10.4049/jimmunol.194.supp.196.11","title":"Butyric acid inhibits a Toll-like receptor 2 agonist-mediated increase of Toll-like receptor 3-induced chemokine production by HT-29 intestinal epithelial cells (IRC10P.413)","year":2015,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Tech University","funders":"","keywords":"TLR3; Agonist; Chemistry; Chemokine; TLR2; Receptor; Incubation; Butyric acid; Internal medicine; Biochemistry; Endocrinology; Pharmacology; Toll-like receptor; Biology; TLR4; Innate immune system; Medicine","score_opus":0.012977592712830905,"score_gpt":0.22241649405850492,"score_spread":0.209438901345674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2176227514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933561,0.0027673389,0.00095086364,0.00022656667,0.00009095582,0.000056239107,0.0011493574,0.00008069236,0.0013219154],"genre_scores_gemma":[0.99371225,0.0012212287,0.00141694,0.000114041395,0.00003663564,0.0000822488,0.0013527112,0.00002006654,0.0020437324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997435,0.00005956251,0.00003351909,0.000022920422,0.000046763278,0.00009374922],"domain_scores_gemma":[0.9998357,0.000037963306,0.000031731386,0.000022793487,0.000020724987,0.00005104323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002204144,0.0005863316,0.00055001397,0.00020985387,0.00017503164,0.00022209149,0.00024222751,0.00034858217,0.0023679256],"category_scores_gemma":[0.0001647109,0.00019187115,0.0005223779,0.0002040743,0.00020285674,0.00018510393,0.00026842268,0.0009200059,0.0007091475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004935612,0.000102552556,0.00008544963,0.000057744983,0.000005611964,0.00007492816,0.000010609828,0.00004145826,0.99853325,0.000014351112,0.00006517289,0.0005153405],"study_design_scores_gemma":[0.00011494749,0.0022243778,0.0070326636,0.000013235934,0.000020291276,0.00020269818,0.000045352295,0.00079908886,0.9883717,0.000022765931,0.0011463922,0.0000065145914],"about_ca_topic_score_codex":0.001406485,"about_ca_topic_score_gemma":0.0015437073,"teacher_disagreement_score":0.0023679256,"about_ca_system_score_codex":0.00023588401,"about_ca_system_score_gemma":0.0003110224,"threshold_uncertainty_score":0.007921457},"labels":[],"label_agreement":null},{"id":"W2176700515","doi":"10.1637/0005-2086(2007)051[0078:pocaal]2.0.co;2","title":"Protection of Chickens Against a Lethal Challenge of Escherichia coli by a Vaccine Containing CpG Oligodeoxynucleotides as an Adjuvant","year":2007,"lang":"en","type":"article","venue":"Avian Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shared Health; University of Saskatchewan","funders":"","keywords":"Adjuvant; CpG Oligodeoxynucleotide; Biology; CpG site; Escherichia coli; Antigen; Microbiology; Vaccination; Virology; Immunology; Biochemistry; DNA methylation","score_opus":0.010059325726721335,"score_gpt":0.24267384431143427,"score_spread":0.23261451858471294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2176700515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987821,0.0003431151,0.00033893695,0.00003429242,0.00002134545,0.000018908226,0.00007067162,0.000018097326,0.00037259926],"genre_scores_gemma":[0.9963799,0.0003327584,0.0010886693,0.00006804018,0.00001027992,0.00003202395,0.00021702165,0.000008722624,0.0018625185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998882,0.000014195824,0.000010462295,0.000037443915,0.000016254993,0.000033502434],"domain_scores_gemma":[0.9997968,0.00003716816,0.00005105804,0.000012846748,0.000029398814,0.00007280496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014201713,0.00038508823,0.00024525513,0.00018579017,0.00011449724,0.00019951042,0.00013161835,0.00044658154,0.00076911],"category_scores_gemma":[0.00014264566,0.0001832687,0.000197887,0.00004052627,0.0002169969,0.00022088188,0.00011249822,0.00038400554,0.00021718546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006408279,0.00011379705,0.0007557332,0.00004678223,0.000006827816,0.000030151605,0.000030078829,0.00004612841,0.9971553,0.000015971546,0.000020003674,0.0011383732],"study_design_scores_gemma":[0.00023696681,0.0336731,0.051938955,0.000065667205,0.00008043275,0.0004919675,0.00024425567,0.0013842315,0.909391,0.00007879088,0.0023969382,0.000017794899],"about_ca_topic_score_codex":0.0009973116,"about_ca_topic_score_gemma":0.0015973093,"teacher_disagreement_score":0.0009973116,"about_ca_system_score_codex":0.00022519831,"about_ca_system_score_gemma":0.00018659013,"threshold_uncertainty_score":0.0025729537},"labels":[],"label_agreement":null},{"id":"W2178846731","doi":"10.1089/108729003768247628","title":"Safety of CpG Oligodeoxynucleotides in Veterinary Species","year":2003,"lang":"en","type":"article","venue":"Antisense and Nucleic Acid Drug Development","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"CpG Oligodeoxynucleotide; CpG site; Immune system; Innate immune system; Adjuvant; Biology; DNA; Immunology; Computational biology; Gene; Genetics; DNA methylation; Gene expression","score_opus":0.011377786490704082,"score_gpt":0.2151377254281486,"score_spread":0.2037599389374445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2178846731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87030643,0.07760452,0.03262281,0.0015039035,0.0005495796,0.0004313344,0.00082677905,0.0002099963,0.015944604],"genre_scores_gemma":[0.9500377,0.026646115,0.016795984,0.00051782187,0.00012210339,0.00018329505,0.00058619963,0.000032324755,0.0050784163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991221,0.00029508467,0.00008671684,0.0001275077,0.0003311584,0.00003750046],"domain_scores_gemma":[0.9991399,0.00024267856,0.0002477398,0.00006977395,0.000241063,0.00005885302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001324876,0.00023124987,0.0003479699,0.0002761413,0.00025787237,0.0003218944,0.00020314727,0.0006809754,0.0016616152],"category_scores_gemma":[0.0014860654,0.000104359315,0.00017861312,0.00024003127,0.00040398343,0.00023057597,0.00021759172,0.00042130673,0.0003985095],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013800869,0.00013911504,0.0054410608,0.0019592086,0.000044690296,0.00029588008,0.000276922,0.00049122516,0.81410736,0.0011887911,0.00048690534,0.17418881],"study_design_scores_gemma":[0.000104963925,0.0138558205,0.014649611,0.0008075592,0.00016569966,0.0026022636,0.00034877102,0.0008041615,0.88715327,0.0012129652,0.07826077,0.00003399941],"about_ca_topic_score_codex":0.0004705411,"about_ca_topic_score_gemma":0.0006873312,"teacher_disagreement_score":0.0016616152,"about_ca_system_score_codex":0.0002985536,"about_ca_system_score_gemma":0.00060424936,"threshold_uncertainty_score":0.007006705},"labels":[],"label_agreement":null},{"id":"W2179164933","doi":"10.1371/journal.pone.0137753","title":"Staphylococcus aureus Inhibits IL-8 Responses Induced by Pseudomonas aeruginosa in Airway Epithelial Cells","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; Christie (Canada)","funders":"Cystic Fibrosis Canada; Burroughs Wellcome Fund","keywords":"TLR2; Microbiology; TLR5; Pseudomonas aeruginosa; TLR4; Cystic fibrosis; Biology; Innate immune system; Staphylococcus aureus; Immunology; Respiratory epithelium; Inflammation; Respiratory tract; Immune system; Epithelium; Respiratory system; Bacteria","score_opus":0.03809338717426745,"score_gpt":0.23300868963916244,"score_spread":0.194915302464895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2179164933","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98970735,0.006583971,0.0013115524,0.00021868505,0.00011987272,0.00005443356,0.00038189447,0.00007077052,0.0015516048],"genre_scores_gemma":[0.9923901,0.0027198514,0.0018483447,0.00015633879,0.00005209457,0.00007280531,0.0007785804,0.000014911914,0.0019670639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997483,0.00007180644,0.00003559972,0.000024287276,0.00006436565,0.000055622077],"domain_scores_gemma":[0.99989164,0.000029261684,0.000022336524,0.000015637115,0.000019485757,0.000021693242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019396924,0.00043506164,0.0004484626,0.00020222177,0.00011544656,0.00022283367,0.00014910738,0.00029389915,0.00090919976],"category_scores_gemma":[0.00013644127,0.00011203287,0.00039440903,0.00012744659,0.0001376154,0.00014865126,0.00024818844,0.0006922177,0.00040374353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017828993,0.00010436221,0.00010232072,0.0000713914,0.0000051222605,0.000040514795,0.000019245032,0.000031987856,0.9981951,0.000013394412,0.000047773985,0.0011905071],"study_design_scores_gemma":[0.00006956136,0.0022515776,0.009269998,0.000028441751,0.00002683884,0.00029563112,0.00007424291,0.00096097915,0.98375976,0.000040725587,0.0032159633,0.000006281292],"about_ca_topic_score_codex":0.00043557328,"about_ca_topic_score_gemma":0.00070666417,"teacher_disagreement_score":0.00090919976,"about_ca_system_score_codex":0.00009035575,"about_ca_system_score_gemma":0.00017647083,"threshold_uncertainty_score":0.003041625},"labels":[],"label_agreement":null},{"id":"W2179197851","doi":"10.3390/pathogens4040826","title":"Antimicrobial Mechanisms of Macrophages and the Immune Evasion Strategies of Staphylococcus aureus","year":2015,"lang":"en","type":"review","venue":"Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":191,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Staphylococcus aureus; Microbiology; Immune system; Antimicrobial; Biology; Innate immune system; Effector; Evasion (ethics); Immunology; Immunity; Macrophage; Pathogen; Acquired immune system; Antimicrobial peptides; Bacteria; In vitro","score_opus":0.02251501115809354,"score_gpt":0.28009711479908456,"score_spread":0.257582103640991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2179197851","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001933335,0.99864703,0.00010493742,0.00013098403,0.00011905708,0.0000039156735,0.000008836992,0.0000050466465,0.00078684086],"genre_scores_gemma":[0.0011514261,0.99781966,0.00016818198,0.000108388536,0.00011592019,0.0000056611516,0.00002160209,8.855344e-7,0.0006082192],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998265,0.000029919509,0.000022830869,0.00002316348,0.00007239026,0.00002525152],"domain_scores_gemma":[0.9998437,0.000057344114,0.000029084233,0.000004806522,0.000046082212,0.000018842053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040066245,0.0006845268,0.00088465813,0.0018380431,0.00028235614,0.00082134636,0.00059565343,0.0009360674,0.0018282806],"category_scores_gemma":[0.00038089103,0.00021615584,0.00042006033,0.0011007881,0.00043040692,0.0011099813,0.00060146174,0.0011172253,0.0013327549],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081079525,0.00007458633,0.00034998258,0.018589072,0.00006506826,0.00042581564,0.00014477829,0.0003453211,0.009407723,0.0058773067,0.01883633,0.9458029],"study_design_scores_gemma":[0.000011605113,0.00014970094,0.001210879,0.0031185395,0.000058839934,0.0023399843,0.00009361311,0.00008924911,0.0018467968,0.0022839732,0.9887782,0.000018665072],"about_ca_topic_score_codex":0.000540768,"about_ca_topic_score_gemma":0.00080050906,"teacher_disagreement_score":0.0018380431,"about_ca_system_score_codex":0.00044562307,"about_ca_system_score_gemma":0.0008268444,"threshold_uncertainty_score":0.0061162114},"labels":[],"label_agreement":null},{"id":"W2179882789","doi":"10.4049/jimmunol.1500378","title":"Regulation of TLR3 Activation by S100A9","year":2015,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"TLR3; Endosome; Cell biology; Innate immune system; Biology; Chemistry; Intracellular; Toll-like receptor; Immune system; Immunology","score_opus":0.01425403829521995,"score_gpt":0.23364135206254252,"score_spread":0.21938731376732257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2179882789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923355,0.0018968298,0.0027541288,0.0002750694,0.00006033225,0.000039945582,0.00061148976,0.00009456151,0.0019321378],"genre_scores_gemma":[0.9955835,0.00063423865,0.0013572167,0.000116611904,0.0000088850775,0.00005355711,0.00045288238,0.000015941596,0.0017771777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997913,0.000038306523,0.00002290124,0.000043161126,0.00004352512,0.0000608233],"domain_scores_gemma":[0.9998684,0.000013418784,0.000052742238,0.000012391968,0.00001968812,0.00003337167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013118958,0.0003222177,0.00018626075,0.00018928954,0.0001850254,0.0003217692,0.00015835465,0.00038672058,0.0013794585],"category_scores_gemma":[0.00012529988,0.00013463476,0.00040131324,0.00012053362,0.0002825589,0.0001646539,0.0003526887,0.00070888293,0.000632142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013156277,0.000013724081,0.00019049358,0.000028098286,0.0000032138387,0.000053984037,0.0000062572817,0.000030667994,0.99889743,0.000058480484,0.000037800313,0.0005482439],"study_design_scores_gemma":[0.000031800355,0.00016942817,0.011634921,0.000015446903,0.000015143498,0.00033537278,0.0000622648,0.0016224198,0.9830837,0.00011747782,0.0029050196,0.0000070916135],"about_ca_topic_score_codex":0.00056848244,"about_ca_topic_score_gemma":0.00073061365,"teacher_disagreement_score":0.0013794585,"about_ca_system_score_codex":0.00047698352,"about_ca_system_score_gemma":0.00023966537,"threshold_uncertainty_score":0.0046147704},"labels":[],"label_agreement":null},{"id":"W2182353725","doi":"10.1152/ajplung.2001.280.4.l762","title":"Role of LPS-induced microfilament depolymerization in MIP-2 production from rat pneumocytes","year":2001,"lang":"en","type":"article","venue":"American Journal of Physiology-Lung Cellular and Molecular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"","keywords":"Microfilament; Cytochalasin D; Cytochalasin B; Lipopolysaccharide; Cell biology; Cytochalasin; Depolymerization; Actin; Chemistry; Cytoskeleton; Biology; Biochemistry; Immunology; In vitro; Cell","score_opus":0.003255951892566456,"score_gpt":0.2024933479767109,"score_spread":0.19923739608414445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2182353725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909231,0.0047397483,0.0023196382,0.00017848217,0.000022496653,0.000042039304,0.0006688309,0.00008996868,0.0010156572],"genre_scores_gemma":[0.99384755,0.0018087832,0.0023399615,0.00006548027,0.000023360824,0.00007411188,0.00082914374,0.000014840508,0.0009966792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986064,0.000032155254,0.000015169379,0.000020840738,0.000028410597,0.000042810774],"domain_scores_gemma":[0.9997948,0.000033122476,0.000074698706,0.000020908643,0.000026942027,0.000049499653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018109543,0.0004738376,0.0002523539,0.00027903504,0.0001619763,0.00031325218,0.000110712586,0.00030783375,0.000788551],"category_scores_gemma":[0.00017695222,0.00021980978,0.0002974246,0.00014250439,0.00019569784,0.00026116567,0.00021346683,0.00044789488,0.00042275002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006341547,0.0000080910795,0.00008539793,0.000018834276,0.0000012457099,0.00002861553,0.000003389111,0.0000089156665,0.9995369,0.000012855957,0.000006152182,0.00022629915],"study_design_scores_gemma":[0.000017610191,0.00018319972,0.0119059,0.0000074145946,0.000008678515,0.00016256186,0.000015483614,0.0002630534,0.9866801,0.000027607317,0.00072451954,0.000003844602],"about_ca_topic_score_codex":0.00037320898,"about_ca_topic_score_gemma":0.0004495324,"teacher_disagreement_score":0.000788551,"about_ca_system_score_codex":0.00023910278,"about_ca_system_score_gemma":0.00018117158,"threshold_uncertainty_score":0.0026379228},"labels":[],"label_agreement":null},{"id":"W2183364729","doi":"10.1007/978-1-62703-845-4_28","title":"High-Purity Neutrophil Isolation from Human Peripheral Blood and Saliva for Transcriptome Analysis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Saliva; Rheumatoid arthritis; Periodontitis; Chronic bronchitis; Immunology; Transcriptome; Medicine; Inflammatory bowel disease; Peripheral blood; Biology; Disease; Pathology; Internal medicine; Gene; Genetics; Gene expression","score_opus":0.011701828240088525,"score_gpt":0.3283818021576775,"score_spread":0.31667997391758895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2183364729","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24197005,0.049329273,0.58149046,0.002521828,0.002373387,0.010322986,0.08088487,0.0047387364,0.02636845],"genre_scores_gemma":[0.25024205,0.033846833,0.52844006,0.0023055908,0.0008053983,0.017476184,0.13708377,0.000867765,0.02893234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99934906,0.00010000868,0.0000840843,0.00014857532,0.00022497126,0.00009327952],"domain_scores_gemma":[0.9998264,0.000047746347,0.000015326003,0.00003601843,0.00005506315,0.000019452958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091742625,0.0007225055,0.0007944657,0.00062804436,0.0005722858,0.0009778972,0.00051982515,0.00059074303,0.004121392],"category_scores_gemma":[0.0006819691,0.00033366057,0.0005558491,0.00067522895,0.00029297455,0.0003267054,0.0005831687,0.001521778,0.0054041953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016877579,0.00006233554,0.0009818169,0.00046556556,0.000036804042,0.000142772,0.00009599365,0.00020510855,0.9736095,0.00059431966,0.004453013,0.019183952],"study_design_scores_gemma":[0.00019937396,0.0006579997,0.021698005,0.00045056842,0.00019730278,0.0012301765,0.00023538056,0.003092332,0.7338184,0.002170864,0.23616296,0.00008664289],"about_ca_topic_score_codex":0.00068951957,"about_ca_topic_score_gemma":0.0025898104,"teacher_disagreement_score":0.004121392,"about_ca_system_score_codex":0.00019337535,"about_ca_system_score_gemma":0.0007661376,"threshold_uncertainty_score":0.013787448},"labels":[],"label_agreement":null},{"id":"W2185163395","doi":"10.1016/j.cellsig.2015.12.002","title":"TLR signalling affects sperm mitochondrial function and motility via phosphatidylinositol 3-kinase and glycogen synthase kinase-3α","year":2015,"lang":"en","type":"article","venue":"Cellular Signalling","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China; Natural Science Foundation of Jiangsu Province; National Natural Science Foundation of China","keywords":"Cell biology; Sperm motility; Motility; GSK-3; Phosphatidylinositol; Biology; PI3K/AKT/mTOR pathway; Kinase; Mitochondrion; Sperm; Glycogen synthase; Signal transduction; GSK3B; Phosphorylation; Genetics","score_opus":0.014684738821332208,"score_gpt":0.21151484572897797,"score_spread":0.19683010690764577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2185163395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99073833,0.002586137,0.0017721493,0.00081124465,0.00015346022,0.000029267932,0.0006496809,0.00007836883,0.0031813444],"genre_scores_gemma":[0.9940177,0.0007408111,0.0005435597,0.00018522053,0.000017711754,0.000028884499,0.00037118563,0.000008464883,0.004086431],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996013,0.00010484235,0.000028148565,0.000050725386,0.000044318593,0.00017072358],"domain_scores_gemma":[0.99987197,0.000018647375,0.000034699187,0.000014076501,0.000018952955,0.00004169342],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025377332,0.00021225013,0.00028670643,0.00023040871,0.00028604106,0.0004763903,0.0002859178,0.00077732676,0.005485452],"category_scores_gemma":[0.0002642313,0.00024113255,0.0006005052,0.00015391392,0.00035498483,0.000436241,0.00042079776,0.00094655924,0.00085996726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0057809884,0.00018597247,0.0017443676,0.00019047601,0.000042608695,0.0001939315,0.000041459953,0.00018766896,0.9864612,0.0005482292,0.00036535712,0.0042577805],"study_design_scores_gemma":[0.00055044907,0.0029203799,0.052381355,0.00007592549,0.00017549805,0.0009202972,0.0005851046,0.0022116683,0.9324563,0.0008059994,0.006880181,0.000036822723],"about_ca_topic_score_codex":0.00044296926,"about_ca_topic_score_gemma":0.0006235865,"teacher_disagreement_score":0.005485452,"about_ca_system_score_codex":0.0004457637,"about_ca_system_score_gemma":0.0003567997,"threshold_uncertainty_score":0.01835066},"labels":[],"label_agreement":null},{"id":"W2185251962","doi":"10.1189/jlb.68.6.821","title":"Neutrophil migration stimulates rat intestinal epithelial cell cytokine expression during helminth infection","year":2000,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Medical Research Council Canada; Crohn's and Colitis Foundation of Canada","keywords":"Biology; Intestinal epithelium; Epithelium; Cytokine; Infiltration (HVAC); Immunology; Inflammation; Receptor; Intestinal mucosa; Internal medicine; Medicine","score_opus":0.0076794193362403175,"score_gpt":0.2303262609959646,"score_spread":0.2226468416597243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2185251962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993737,0.003128511,0.0011669355,0.000069356276,0.00003541406,0.000040706793,0.0002953741,0.00005993494,0.0014668324],"genre_scores_gemma":[0.9882238,0.0038565102,0.0028516806,0.000105609695,0.00003232771,0.0001188572,0.00094028993,0.00002358294,0.0038473634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981827,0.000042608604,0.000010870505,0.000021100777,0.00003592003,0.00007135884],"domain_scores_gemma":[0.9999225,0.000018094195,0.00001737805,0.000010360601,0.000011788252,0.000019809764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000205241,0.00046620923,0.0003554244,0.00026666519,0.00011962093,0.00022870132,0.0000983297,0.00022621943,0.0013323252],"category_scores_gemma":[0.00013714786,0.0001600657,0.00020250774,0.00018532308,0.0001888448,0.00015515626,0.00017555497,0.00039680986,0.000767766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018315366,0.000023553835,0.00015086212,0.000038871098,0.0000017672352,0.000047816688,0.000017840293,0.000020357278,0.9988311,0.000023995544,0.000019889401,0.0006407657],"study_design_scores_gemma":[0.00006865063,0.0014006171,0.012091556,0.000022985216,0.00002404437,0.00034432823,0.00009355372,0.0004568345,0.9837916,0.00006021239,0.0016395351,0.000006135335],"about_ca_topic_score_codex":0.0004036464,"about_ca_topic_score_gemma":0.00079603016,"teacher_disagreement_score":0.0013323252,"about_ca_system_score_codex":0.00023313831,"about_ca_system_score_gemma":0.0001516067,"threshold_uncertainty_score":0.0044570565},"labels":[],"label_agreement":null},{"id":"W2188788278","doi":"10.1139/y11-071","title":"Specific loss of Toll-like receptor 2 on bone marrow derived cells decreases atherosclerosis in LDL receptor null mice*The senior author, Stewart C. Whitman, passed away on 19 February 2010. The manuscript has been communicated by Ross W. Milne (e-mail: rmilne@ottawaheart.ca) and Yves L. Marcel (e-mail: ylmarcel@ottawaheart.ca), University of Ottawa Heart Institute, 40 Ruskin Street, Ottawa, ON K1Y 4W7, Canada.","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":true,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research; National Institutes of Health; Heart and Stroke Foundation of Canada","keywords":"LDL receptor; TLR2; Bone marrow; Internal medicine; Endocrinology; Cholesterol; Receptor; Innate immune system; Medicine; Inflammation; Biology; Lipoprotein; Immunology","score_opus":0.021960200202587,"score_gpt":0.21118920378716557,"score_spread":0.1892290035845786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2188788278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915181,0.002221219,0.0023405503,0.0003304045,0.00014865097,0.00008582042,0.0009297245,0.0004839012,0.0019415468],"genre_scores_gemma":[0.969449,0.0029267867,0.0048771594,0.0004052864,0.000086824446,0.00020849089,0.0016319954,0.0002908775,0.020123744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995316,0.00007043334,0.000048274294,0.000091906826,0.000121259756,0.00013652389],"domain_scores_gemma":[0.9995105,0.000045802568,0.00014103948,0.000042206655,0.00003957083,0.00022083956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003523217,0.0009747131,0.00069625553,0.0008407231,0.00022744398,0.00056513585,0.0005373494,0.0007359266,0.00300997],"category_scores_gemma":[0.00019193777,0.00052301836,0.00039876523,0.00024033424,0.0005069997,0.00028305608,0.00036348437,0.0013854231,0.0012881984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035210385,0.00013141704,0.00016878788,0.000027512902,0.000007728722,0.000046388126,0.000016325046,0.000026679214,0.99809355,0.00005375034,0.00009616253,0.0009796396],"study_design_scores_gemma":[0.00019994038,0.002041872,0.0062011452,0.000032379096,0.000057229216,0.00037211837,0.00007307585,0.00044911972,0.98782384,0.00006318472,0.0026701996,0.00001587238],"about_ca_topic_score_codex":0.0006531713,"about_ca_topic_score_gemma":0.001917187,"teacher_disagreement_score":0.00300997,"about_ca_system_score_codex":0.0003470307,"about_ca_system_score_gemma":0.0003735336,"threshold_uncertainty_score":0.01006937},"labels":[],"label_agreement":null},{"id":"W2194465442","doi":"10.1016/j.cyto.2015.11.025","title":"Protective role of G-CSF in dextran sulfate sodium-induced acute colitis through generating gut-homing macrophages","year":2015,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Colitis; Macrophage colony-stimulating factor; Tumor necrosis factor alpha; Chemistry; Immunology; Adoptive cell transfer; Cytokine; Immune system; Macrophage; Endocrinology; Biology; Internal medicine; Medicine; T cell; In vitro; Biochemistry","score_opus":0.020664358766570246,"score_gpt":0.25988460396532165,"score_spread":0.2392202451987514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2194465442","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99428517,0.0025909636,0.0012542758,0.00033201833,0.00011715339,0.00005036797,0.00012340536,0.00006542076,0.0011812495],"genre_scores_gemma":[0.99615604,0.0010032989,0.0015619277,0.00011200808,0.000063762425,0.00004663317,0.00007296182,0.00001073274,0.0009727371],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998591,0.000040941093,0.000008586419,0.000011553584,0.000020442152,0.000059295184],"domain_scores_gemma":[0.9998691,0.000010583864,0.000021523443,0.00001265503,0.000013655871,0.000072309034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021629127,0.00046653225,0.0003096868,0.00032318683,0.00016051887,0.00024358815,0.00016381094,0.00035875302,0.0007803192],"category_scores_gemma":[0.00014644106,0.00009629376,0.00027481889,0.00011054285,0.00039082175,0.0002289044,0.00022445853,0.00096756977,0.00018929585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004744272,0.00054559467,0.0010110534,0.00020527639,0.000015243071,0.00039395495,0.000062176456,0.0001732715,0.97495645,0.00035796224,0.0003115299,0.017223252],"study_design_scores_gemma":[0.001021958,0.006161893,0.015742846,0.000089913716,0.00016218013,0.0005965867,0.0002156704,0.0016899814,0.9676853,0.0004548884,0.006163709,0.000015102837],"about_ca_topic_score_codex":0.0003154339,"about_ca_topic_score_gemma":0.00049454736,"teacher_disagreement_score":0.0007803192,"about_ca_system_score_codex":0.0001628926,"about_ca_system_score_gemma":0.00046140613,"threshold_uncertainty_score":0.0026103854},"labels":[],"label_agreement":null},{"id":"W2197468298","doi":"10.1038/gene.2015.41","title":"Survival analysis and microarray profiling identify Cd40 as a candidate for the Salmonella susceptibility locus, Ity5","year":2015,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Congenic; Salmonella; Immunology; Microarray analysis techniques; Genetics; Gene; Gene expression profiling; Salmonella infection; CD40; Immune system; Gene expression; Cytotoxic T cell","score_opus":0.02634068967920332,"score_gpt":0.28909221772413346,"score_spread":0.2627515280449301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2197468298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99300027,0.00030866958,0.0037011076,0.00009240168,0.000021548123,0.000013325671,0.0016798903,0.000093638555,0.0010891946],"genre_scores_gemma":[0.9875958,0.00015462471,0.0034799872,0.00007665867,0.000011183301,0.000022298886,0.0029632165,0.00003406165,0.0056621945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998584,0.000011205428,0.000008231494,0.000037207366,0.000040441053,0.000044517885],"domain_scores_gemma":[0.99984586,0.000031209736,0.00003872021,0.000012825062,0.000024372182,0.000046992143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010834143,0.00025478017,0.00020543642,0.00054589857,0.00026296766,0.00041963693,0.000135174,0.0003141749,0.0023663582],"category_scores_gemma":[0.00018562019,0.00012349957,0.00035598275,0.00028225785,0.00014375262,0.00010667373,0.00022873862,0.00042282132,0.0006660542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012342444,0.000011397995,0.0017947073,0.000007975583,0.000003038875,0.000043056705,0.000012675875,0.00003047101,0.99691904,0.000065143526,0.0000458704,0.00094315707],"study_design_scores_gemma":[0.000013438864,0.0003100587,0.21477033,0.0000072107305,0.000032082906,0.00050577,0.00019787178,0.0035053347,0.7756372,0.00026494803,0.004741053,0.000014684716],"about_ca_topic_score_codex":0.0013408134,"about_ca_topic_score_gemma":0.001972975,"teacher_disagreement_score":0.0023663582,"about_ca_system_score_codex":0.00039333256,"about_ca_system_score_gemma":0.00017220402,"threshold_uncertainty_score":0.007916272},"labels":[],"label_agreement":null},{"id":"W2203291811","doi":"10.1371/journal.pone.0139856","title":"Leukotriene B4 Enhances NOD2-Dependent Innate Response against Influenza Virus Infection","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Leukotriene B4; Innate immune system; NOD2; Inflammation; IRF3; Immune system; Biology; Immunology; Secretion; Influenza A virus; Virus","score_opus":0.056156501739841116,"score_gpt":0.2589044943146387,"score_spread":0.2027479925747976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2203291811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941533,0.0021718,0.001144981,0.0001722638,0.000064647604,0.000051539697,0.00043520954,0.00010218027,0.001704145],"genre_scores_gemma":[0.99342865,0.00088886044,0.001016014,0.00011239608,0.00002251975,0.00008753291,0.0009055575,0.000018207229,0.0035202047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997023,0.00008931477,0.000036507143,0.00003851351,0.000053710257,0.00007970046],"domain_scores_gemma":[0.9998273,0.000016803933,0.000043572658,0.000018968707,0.000017629947,0.0000756603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026797774,0.0005259439,0.00045627568,0.00038707425,0.00016661957,0.00031896966,0.00024652484,0.0003677529,0.0020018704],"category_scores_gemma":[0.00015816497,0.00017653123,0.00052454334,0.00010815595,0.00025317667,0.00026603593,0.0003810933,0.0010018799,0.00060844695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004185164,0.00006841416,0.0001709507,0.00008064219,0.000009158411,0.00007311606,0.000017055816,0.000045157805,0.99837047,0.000042767722,0.000038244714,0.0006654555],"study_design_scores_gemma":[0.00013549394,0.0019002164,0.012688399,0.000035384222,0.000052657466,0.00047322217,0.00012223779,0.0012641319,0.98014426,0.00009621971,0.0030750264,0.00001260748],"about_ca_topic_score_codex":0.00040161135,"about_ca_topic_score_gemma":0.00064249017,"teacher_disagreement_score":0.0020018704,"about_ca_system_score_codex":0.00030457642,"about_ca_system_score_gemma":0.00022295714,"threshold_uncertainty_score":0.0066969395},"labels":[],"label_agreement":null},{"id":"W2217215084","doi":"10.1152/ajpregu.2000.278.5.r1140","title":"Role of endotoxin in the expression of endothelial selectins after cecal ligation and perforation","year":2000,"lang":"en","type":"article","venue":"American Journal of Physiology-Regulatory, Integrative and Comparative Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Selectin; Lipopolysaccharide; Sepsis; E-selectin; Perforation; Medicine; Immunology; Myeloperoxidase; Endothelial stem cell; Peritonitis; Small intestine; Cell adhesion molecule; Inflammation; Biology; Internal medicine; Cell adhesion; Cell; Biochemistry; In vitro","score_opus":0.007188841066829093,"score_gpt":0.2386879712311027,"score_spread":0.2314991301642736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2217215084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801564,0.0007440715,0.0007630417,0.000058591293,0.0000160105,0.000011444207,0.000022352438,0.000021778369,0.00034703503],"genre_scores_gemma":[0.99866843,0.00045534945,0.0003719207,0.000051997184,0.000018543684,0.000017623977,0.000061868486,0.0000049409264,0.00034931657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996793,0.00011090118,0.000025021931,0.00003052256,0.000055685752,0.00009856609],"domain_scores_gemma":[0.9993913,0.000077526114,0.0002788882,0.000058552152,0.00004715664,0.00014648045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003842734,0.00029003693,0.00041422094,0.00039346807,0.00019944273,0.0005403442,0.00013033919,0.0004437408,0.00079911936],"category_scores_gemma":[0.0007304571,0.00018020316,0.00024476874,0.00016069943,0.0005545724,0.0004184495,0.00036021814,0.0007872274,0.00016935213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039917184,0.00017171157,0.003994809,0.00009897875,0.0000109115335,0.0013006262,0.000135529,0.000116916446,0.983869,0.00024029448,0.00006751251,0.0060020224],"study_design_scores_gemma":[0.00021052497,0.009863835,0.19902751,0.000076635144,0.00010563956,0.0046413327,0.00076609134,0.0020321966,0.78106344,0.00041189085,0.00176565,0.000035246732],"about_ca_topic_score_codex":0.00010627381,"about_ca_topic_score_gemma":0.0001312415,"teacher_disagreement_score":0.00079911936,"about_ca_system_score_codex":0.0002321322,"about_ca_system_score_gemma":0.0001915341,"threshold_uncertainty_score":0.002673328},"labels":[],"label_agreement":null},{"id":"W2225153589","doi":"10.1016/j.ajhg.2015.11.014","title":"Genomic Signatures of Selective Pressures and Introgression from Archaic Hominins at Human Innate Immunity Genes","year":2016,"lang":"en","type":"article","venue":"The American Journal of Human Genetics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":273,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; Institut national de la recherche scientifique","keywords":"Biology; Innate immune system; Genome; Gene; Acquired immune system; Introgression; Genetics; Evolutionary biology; Natural selection; Candidate gene; Immunity; Genetic variation; Human genome; Selection (genetic algorithm); Immune system","score_opus":0.009216157674716311,"score_gpt":0.2528789486110946,"score_spread":0.2436627909363783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2225153589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99920684,0.00012404307,0.000112525035,0.000025987725,0.000004095981,0.0000026145915,0.00020276886,0.0000043249925,0.00031683603],"genre_scores_gemma":[0.999226,0.000085268846,0.00013727698,0.000052599935,0.0000092292385,0.000004374861,0.00022984615,0.000008352758,0.00024711838],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9996836,0.00005886079,0.000021731088,0.00011820065,0.000053421143,0.00006424987],"domain_scores_gemma":[0.99940884,0.00021051875,0.00015068847,0.00006943469,0.000043529384,0.00011703653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024054929,0.00025744125,0.00041938075,0.0010164358,0.000384341,0.0006159264,0.00023760967,0.0005186254,0.0028485723],"category_scores_gemma":[0.00055284717,0.0001868408,0.00037517186,0.0011001686,0.00056765374,0.00019879019,0.0005665689,0.0008363509,0.00031703935],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031666525,0.00010868097,0.28307053,0.0001480026,0.0006836878,0.0011768661,0.001511293,0.00056742446,0.6932749,0.0008191354,0.00023086646,0.015241879],"study_design_scores_gemma":[0.00004206894,0.00017115506,0.98879063,0.000018948691,0.00016857838,0.001468351,0.0005763805,0.0003607867,0.0071277153,0.0003283256,0.0009308966,0.00001613922],"about_ca_topic_score_codex":0.00083123427,"about_ca_topic_score_gemma":0.001475657,"teacher_disagreement_score":0.0028485723,"about_ca_system_score_codex":0.00017185546,"about_ca_system_score_gemma":0.00012836486,"threshold_uncertainty_score":0.009529412},"labels":[],"label_agreement":null},{"id":"W2231680205","doi":"10.4049/jimmunol.192.supp.47.9","title":"Aryl hydrocarbon receptor attenuation of sub-chronic cigarette smoke-induced pulmonary neutrophilia is associated with retention of nuclear RelB and suppression of intercellular adhesion molecule-1 (CAM1P.233)","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Aryl hydrocarbon receptor; Neutrophilia; RELB; Inflammation; Immunology; Lung; Medicine; Chemistry; Transcription factor; Internal medicine; NFKB1; Biochemistry","score_opus":0.009436132833241009,"score_gpt":0.2020335611293887,"score_spread":0.19259742829614768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2231680205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99759334,0.0006934906,0.00096799375,0.000057426107,0.000024366444,0.000019717198,0.0001634564,0.00004799065,0.00043213545],"genre_scores_gemma":[0.9954592,0.0004840903,0.0007879127,0.00005181882,0.0000140143775,0.000044289904,0.00036678105,0.000017171855,0.0027748286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980515,0.0000342491,0.000015814536,0.000027076298,0.00005534796,0.0000623564],"domain_scores_gemma":[0.99977416,0.000026252197,0.000066875335,0.000027624274,0.000022481412,0.00008252813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017282236,0.0003421977,0.00033182863,0.00021827826,0.00008822801,0.00020229506,0.00022714709,0.00027078003,0.0020670334],"category_scores_gemma":[0.00009930195,0.00013992505,0.000252262,0.000097347205,0.00031883953,0.00014482578,0.000222754,0.0008298936,0.00037674812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014813262,0.000060716044,0.00009265343,0.000016619419,0.0000020623645,0.000019916426,0.0000047022295,0.000007710717,0.999212,0.000019445417,0.00001261566,0.00040334614],"study_design_scores_gemma":[0.000054530214,0.0018642877,0.017902812,0.000008895532,0.000018039906,0.0002724548,0.00004807912,0.00044826212,0.97848696,0.000049151127,0.000842027,0.0000045334605],"about_ca_topic_score_codex":0.00043126772,"about_ca_topic_score_gemma":0.00072305993,"teacher_disagreement_score":0.0020670334,"about_ca_system_score_codex":0.00013559472,"about_ca_system_score_gemma":0.00017595298,"threshold_uncertainty_score":0.0069149137},"labels":[],"label_agreement":null},{"id":"W2233683956","doi":"10.1016/j.celrep.2015.12.079","title":"PI5P Triggers ICAM-1 Degradation in Shigella Infected Cells, Thus Dampening Immune Cell Recruitment","year":2016,"lang":"en","type":"article","venue":"Cell Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Advanced Foods and Materials Canada","keywords":"Shigella; Shigella flexneri; Internalization; Immune system; Microbiology; Cell biology; Biology; Pathogen; Secretion; Cell; Immunology; Bacteria; Salmonella; Biochemistry","score_opus":0.01851764647509304,"score_gpt":0.2353885998846627,"score_spread":0.21687095340956966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2233683956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911686,0.0024980332,0.004311186,0.0002002284,0.000045763263,0.000020157348,0.0001820404,0.00009467749,0.0014793021],"genre_scores_gemma":[0.9948815,0.0011413067,0.0021843202,0.000055659486,0.000012727086,0.000027521824,0.000247253,0.000011889984,0.0014379434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989414,0.000013585653,0.000008143229,0.000021176525,0.000025039913,0.000037902177],"domain_scores_gemma":[0.9999567,0.000009783713,0.000010158028,0.000007694536,0.000006503587,0.000009140041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009542729,0.00031737774,0.00030300286,0.00009535098,0.00013346467,0.00032004918,0.00014024522,0.00029882643,0.0013720302],"category_scores_gemma":[0.00009451515,0.00009108946,0.00022395936,0.000085830485,0.00019739552,0.00023663594,0.00023846212,0.0006204149,0.00033311613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006574678,0.000010055344,0.00007886358,0.000040222145,0.0000024795734,0.000058893293,0.000011016318,0.000021239126,0.99885154,0.000061024093,0.000023554205,0.00077535206],"study_design_scores_gemma":[0.000007408054,0.0001235764,0.0019636129,0.000003893133,0.0000060066845,0.00016368764,0.000019536355,0.00030397548,0.9964641,0.000033683893,0.0009087589,0.0000017711786],"about_ca_topic_score_codex":0.00031602057,"about_ca_topic_score_gemma":0.0003107562,"teacher_disagreement_score":0.0013720302,"about_ca_system_score_codex":0.00027016294,"about_ca_system_score_gemma":0.0001786029,"threshold_uncertainty_score":0.0045899153},"labels":[],"label_agreement":null},{"id":"W2235888773","doi":"10.1159/000410472","title":"Structure and Functions of Pseudomonas aeruginosa Lipopolysaccharide","year":2015,"lang":"en","type":"article","venue":"Antibiotics and chemotherapy/Antibiotica et chemotherapia","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Pseudomonas aeruginosa; Microbiology; Lipopolysaccharide; Pseudomonas; Biology; Bacteria; Immunology; Genetics","score_opus":0.011629619693165684,"score_gpt":0.24008414100851322,"score_spread":0.22845452131534755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2235888773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98509556,0.008917904,0.0032207603,0.00047022072,0.00003826376,0.00001815357,0.0001392178,0.000012997884,0.0020869442],"genre_scores_gemma":[0.99369144,0.0023788882,0.0010582071,0.000090517955,0.000020714104,0.00001138718,0.00033553428,0.000005429156,0.0024078954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99994636,0.000016455733,0.000003239742,0.000006763996,0.000010309565,0.000016934595],"domain_scores_gemma":[0.9998989,0.000018397608,0.00002692228,0.000009269479,0.000017674745,0.000028874467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021872432,0.00028860866,0.000103728526,0.00026710972,0.00025803913,0.00036308367,0.0002160217,0.00028914213,0.0009251627],"category_scores_gemma":[0.00018214417,0.00012468,0.00018356075,0.00013806016,0.0004025351,0.00036795856,0.00024159276,0.000453856,0.00034818146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004353107,0.00004768167,0.0009789978,0.00006990934,0.0000060392863,0.00018695084,0.000097570235,0.0003336432,0.99065465,0.002104164,0.000066066495,0.005018978],"study_design_scores_gemma":[0.000045342735,0.0008703468,0.036174092,0.00006801001,0.000029755583,0.0009680702,0.0006062502,0.003800609,0.93995094,0.004456911,0.012984922,0.00004462035],"about_ca_topic_score_codex":0.0006073291,"about_ca_topic_score_gemma":0.0003142177,"teacher_disagreement_score":0.0009251627,"about_ca_system_score_codex":0.00035781594,"about_ca_system_score_gemma":0.00029485478,"threshold_uncertainty_score":0.0030949712},"labels":[],"label_agreement":null},{"id":"W2236938929","doi":"10.1158/1055-9965.epi-15-0798","title":"Serum Endotoxins and Flagellin and Risk of Colorectal Cancer in the European Prospective Investigation into Cancer and Nutrition (EPIC) Cohort","year":2016,"lang":"en","type":"article","venue":"Cancer Epidemiology Biomarkers & Prevention","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"World Cancer Research Fund; Medical Research Council; Hellenic Health Foundation; Instituto de Salud Carlos III; Wereld Kanker Onderzoek Fonds; Institut Gustave-Roussy; Deutsche Krebshilfe; Mutuelle Générale de l'Education Nationale; Associazione Italiana per la Ricerca sul Cancro; Cancerfonden; Institut National de la Santé et de la Recherche Médicale; World Health Organization; European Commission; Bundesministerium für Bildung und Forschung; Ligue Contre le Cancer; National Institute for Health and Care Research; Cancer Research UK; Deutsches Krebsforschungszentrum; Centre International de Recherche sur le Cancer","keywords":"European Prospective Investigation into Cancer and Nutrition; Flagellin; Medicine; Cancer; Prospective cohort study; EPIC; Colorectal cancer; Internal medicine; Cohort; Oncology","score_opus":0.014840389022974626,"score_gpt":0.28365853632493093,"score_spread":0.2688181473019563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2236938929","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978884,0.00031526765,0.00019055339,0.000047004833,0.00001259442,0.000009766195,0.0011419568,0.000008322315,0.0003861904],"genre_scores_gemma":[0.9983038,0.00017570955,0.00015458048,0.000032746713,0.000010885116,0.000015004337,0.00095648185,0.000003966146,0.00034690602],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995586,0.00012956717,0.00003557709,0.00012812314,0.00006541213,0.00008265368],"domain_scores_gemma":[0.99899894,0.00014871387,0.00031225814,0.00020061454,0.00011276468,0.00022674947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000989947,0.00032769362,0.000373388,0.0006181832,0.0004088994,0.00061923725,0.0003624413,0.0005719393,0.0011913854],"category_scores_gemma":[0.0015009479,0.00047255048,0.00065244985,0.00096211483,0.00020985409,0.00032756213,0.0005215905,0.00066124863,0.0001826299],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045940577,0.000032871976,0.99818426,0.0000084384465,0.00013565685,0.000058173053,0.000029155108,0.00006512017,0.0003046129,0.000024324603,0.00015615083,0.0005418443],"study_design_scores_gemma":[0.000020388265,0.00008355012,0.9991911,0.000004559426,0.000084632185,0.00012582554,0.000038826485,0.00022123625,0.000042248572,0.000019008829,0.0001654212,0.0000032244159],"about_ca_topic_score_codex":0.01085267,"about_ca_topic_score_gemma":0.009619082,"teacher_disagreement_score":0.01085267,"about_ca_system_score_codex":0.00021985002,"about_ca_system_score_gemma":0.00033896635,"threshold_uncertainty_score":0.021578968},"labels":[],"label_agreement":null},{"id":"W2239789730","doi":"10.1080/21645515.2015.1114195","title":"Induction of mucosal immunity through systemic immunization: Phantom or reality?","year":2016,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; National Research Council Canada","funders":"","keywords":"Immunology; Immunity; Mucosal immunity; Immunization; Immune system; Medicine; Mucosal immunology; Humoral immunity","score_opus":0.0523191089041115,"score_gpt":0.3104717903929136,"score_spread":0.2581526814888021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2239789730","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002298294,0.9515692,0.0035605503,0.038132932,0.0017734267,0.000011729008,0.000031759544,0.00003513051,0.0025869005],"genre_scores_gemma":[0.02946756,0.9415682,0.004339519,0.01721297,0.0049498947,0.000033094948,0.000042046762,0.000033010347,0.0023536105],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99906474,0.00044138782,0.00009682148,0.00012264,0.00019156562,0.00008289727],"domain_scores_gemma":[0.9967981,0.002250384,0.0002169269,0.00015290773,0.0004513317,0.00013032227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0049034907,0.00038284517,0.0011523827,0.00092370366,0.0003550317,0.0026322058,0.0006850704,0.0027177886,0.0021273033],"category_scores_gemma":[0.002560089,0.00020022278,0.0006263861,0.00073860167,0.003489201,0.0074640624,0.00095238816,0.005328322,0.0008035822],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049235346,0.00021647755,0.0027372935,0.017191526,0.00020038856,0.0026317893,0.0021155805,0.00032377473,0.015737418,0.0859252,0.038719676,0.83370847],"study_design_scores_gemma":[0.000051811745,0.001058762,0.0020545921,0.0071510444,0.00025034545,0.010042873,0.0034776025,0.00037380957,0.008474261,0.06211515,0.9048204,0.00012935561],"about_ca_topic_score_codex":0.0004284563,"about_ca_topic_score_gemma":0.00070718763,"teacher_disagreement_score":0.0049034907,"about_ca_system_score_codex":0.00074890273,"about_ca_system_score_gemma":0.0014999985,"threshold_uncertainty_score":0.02593249},"labels":[],"label_agreement":null},{"id":"W2243694148","doi":"10.1371/journal.pone.0146333","title":"Expression and Polymorphism of Toll-Like Receptor 4 and Effect on NF-κB Mediated Inflammation in Colon Cancer Patients","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; McGill University; Montreal General Hospital","funders":"","keywords":"Colorectal cancer; TLR4; Inflammation; Single-nucleotide polymorphism; Internal medicine; Receptor; Medicine; Immunology; Population; Cancer; Biology; Oncology; Endocrinology; Gastroenterology; Genotype; Gene; Genetics","score_opus":0.009843395288978242,"score_gpt":0.2036558732652793,"score_spread":0.19381247797630108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2243694148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99883646,0.0006788117,0.00007874154,0.000029004905,0.0000057263314,0.0000035853611,0.00016124759,0.0000034182958,0.00020295987],"genre_scores_gemma":[0.99932134,0.00016611864,0.000091852184,0.000020877365,0.000008877146,0.0000061934948,0.00017217736,0.0000020290042,0.00021054107],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998424,0.000043367403,0.000020313762,0.00004631456,0.000021753865,0.000025798396],"domain_scores_gemma":[0.9996189,0.00011892249,0.00013457537,0.000028527245,0.00003225029,0.00006676408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019435078,0.00020161533,0.0003310813,0.0005259592,0.00022654321,0.00031246597,0.0001212,0.00036439113,0.0022895085],"category_scores_gemma":[0.0008483131,0.00014620917,0.00035753177,0.00056611275,0.00016108435,0.00014438358,0.00015011412,0.00026685034,0.00022192427],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013853989,0.000055287604,0.98969144,0.00005363945,0.00013878521,0.0005128607,0.00006786407,0.000055256554,0.0048711663,0.000032241504,0.000102263155,0.0030337174],"study_design_scores_gemma":[0.000032291424,0.00034750983,0.9970612,0.000011119577,0.00013416026,0.0012327234,0.00010881666,0.00016910059,0.00046811486,0.000077869205,0.0003516828,0.0000053329018],"about_ca_topic_score_codex":0.0007579994,"about_ca_topic_score_gemma":0.0007456725,"teacher_disagreement_score":0.0022895085,"about_ca_system_score_codex":0.00012544333,"about_ca_system_score_gemma":0.000118444914,"threshold_uncertainty_score":0.0076591372},"labels":[],"label_agreement":null},{"id":"W2259380452","doi":"10.1089/aid.2014.5252.abstract","title":"Activation of Toll-like Receptor 2 (TLR2) Heterodimers by HIV-1 Proteins Significantly Increases HIV Infection and Inflammation","year":2014,"lang":"en","type":"article","venue":"AIDS Research and Human Retroviruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"TLR2; Human immunodeficiency virus (HIV); Inflammation; Receptor; Toll; Toll-like receptor; Immunology; Biology; Medicine; Virology; Innate immune system; Internal medicine; TLR4","score_opus":0.024911999724151115,"score_gpt":0.28996918654380116,"score_spread":0.26505718681965007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2259380452","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849679,0.00953297,0.0010686906,0.00031311074,0.0002402137,0.00003721455,0.0004415561,0.00007817168,0.003320209],"genre_scores_gemma":[0.9923422,0.0023431056,0.00082389615,0.000220897,0.00011763019,0.000049205606,0.0006237966,0.000010205409,0.0034689906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931157,0.00022907734,0.00003549219,0.00006301388,0.00014198081,0.00021888167],"domain_scores_gemma":[0.9997621,0.00005085814,0.000049720587,0.000034378227,0.000029086046,0.00007387801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003416139,0.0005206237,0.00034212333,0.0003166032,0.00030147767,0.0007639443,0.00013793976,0.0005041293,0.0047281715],"category_scores_gemma":[0.0003541754,0.00023669799,0.0003676453,0.00022741513,0.00019327582,0.00035947934,0.00045420788,0.0011945445,0.0006024902],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095636025,0.00028272273,0.0023843483,0.00012461202,0.000037397764,0.00013923713,0.000033766257,0.000063770574,0.98906964,0.0001789401,0.00043063925,0.0062986915],"study_design_scores_gemma":[0.0001285276,0.0028077373,0.08170551,0.00007190785,0.000102155376,0.0013644575,0.0004598143,0.0010906461,0.9030904,0.0004012366,0.0087525705,0.000025064592],"about_ca_topic_score_codex":0.0002645169,"about_ca_topic_score_gemma":0.00039155156,"teacher_disagreement_score":0.0047281715,"about_ca_system_score_codex":0.0002306252,"about_ca_system_score_gemma":0.00023963385,"threshold_uncertainty_score":0.015817285},"labels":[],"label_agreement":null},{"id":"W2260709854","doi":"10.1155/2002/941087","title":"Intestinal Epithelial Cells as a Source of Inflammatory Cytokines and Chemokines","year":2002,"lang":"en","type":"review","venue":"Canadian Journal of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":207,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Nova Scotia Health Research Foundation; Crohn's and Colitis Foundation of Canada; Natural Sciences and Engineering Research Council of Canada; Crohn's and Colitis Foundation","keywords":"Chemokine; Secretion; Inflammation; Immunology; Enterocyte; Chemotaxis; Biology; Cell biology; Receptor; Small intestine; Endocrinology","score_opus":0.013781853442443011,"score_gpt":0.22787976613952957,"score_spread":0.21409791269708656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2260709854","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025045173,0.9974396,0.0001712114,0.00021617571,0.00028417603,0.0000036690262,0.000009731465,0.000008491974,0.0016165378],"genre_scores_gemma":[0.0018649073,0.9950813,0.00027723855,0.00015146572,0.0003098993,0.0000063696693,0.000023387485,0.0000014986707,0.00228387],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998522,0.000022707443,0.000018457376,0.00002619907,0.00006371837,0.000016662245],"domain_scores_gemma":[0.99984443,0.000042005122,0.000017995779,0.0000056151976,0.000063001076,0.000026827931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038753395,0.0007611448,0.0010913481,0.0016203298,0.00032397284,0.00094459835,0.00054613536,0.00091015367,0.0030560337],"category_scores_gemma":[0.00026699668,0.00021634532,0.00019890584,0.0013897675,0.00045115448,0.0010067722,0.0003801354,0.00088651717,0.0035599777],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001293485,0.000056909295,0.0003858248,0.0062619573,0.00003007295,0.00082293514,0.00007884498,0.00021476176,0.011921348,0.003249025,0.02513075,0.9517182],"study_design_scores_gemma":[0.000016437561,0.00007600905,0.0013771523,0.0007345032,0.00003070575,0.0025574972,0.000067779176,0.000050669652,0.0021275114,0.0011252383,0.99182546,0.000010968515],"about_ca_topic_score_codex":0.0009267384,"about_ca_topic_score_gemma":0.0017013039,"teacher_disagreement_score":0.0030560337,"about_ca_system_score_codex":0.00058987073,"about_ca_system_score_gemma":0.0007317241,"threshold_uncertainty_score":0.010223389},"labels":[],"label_agreement":null},{"id":"W2260776504","doi":"10.1096/fasebj.22.1_supplement.675.4","title":"Murine CD1d‐restricted gamma‐delta T cells respond to cardiolipin","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"CD1D; Cardiolipin; Biology; Natural killer T cell; Immune system; CD1; T cell; T-cell receptor; Antigen; Molecular biology; Interleukin 21; Splenocyte; Cell biology; Immunology; Phospholipid; Biochemistry","score_opus":0.015342721939383526,"score_gpt":0.2240796860101632,"score_spread":0.20873696407077968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2260776504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993323,0.0017790184,0.0012803528,0.00021834968,0.000052567448,0.000025198478,0.00034374234,0.000055948578,0.0029218835],"genre_scores_gemma":[0.9926197,0.0011827635,0.0012567138,0.0001877418,0.000041254654,0.000043893997,0.0006622833,0.000013867398,0.003991808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999835,0.00003131512,0.000015964086,0.00005229338,0.000023208035,0.00004213753],"domain_scores_gemma":[0.99989605,0.000026819544,0.000021425923,0.000012380238,0.000010718006,0.00003255748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014870583,0.000626524,0.0001737266,0.00034765608,0.0001218766,0.00024203128,0.0001633653,0.00038272038,0.002297573],"category_scores_gemma":[0.000121887984,0.00018389184,0.0001627915,0.00011074754,0.00019572116,0.0001831988,0.00018969028,0.0010396815,0.00088317925],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029469642,0.000054839616,0.0004698756,0.00005914029,0.0000029155267,0.000062558254,0.000019271125,0.000047711008,0.99717784,0.00008387161,0.00008707331,0.0016402099],"study_design_scores_gemma":[0.00020885387,0.0012255677,0.012684868,0.000042732765,0.000047122245,0.0008181457,0.0000772721,0.0016721335,0.97851837,0.00019908574,0.00449762,0.000008301261],"about_ca_topic_score_codex":0.00016988357,"about_ca_topic_score_gemma":0.00024025312,"teacher_disagreement_score":0.002297573,"about_ca_system_score_codex":0.00022850209,"about_ca_system_score_gemma":0.000102389444,"threshold_uncertainty_score":0.0076861978},"labels":[],"label_agreement":null},{"id":"W2270886897","doi":"10.1159/000443142","title":"Alterations in Monocyte Phenotypes and Functions after a Hip Fracture in Elderly Individuals: A 6-Month Longitudinal Study","year":2016,"lang":"en","type":"article","venue":"Gerontology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health and Social Services Centre University Institute of Geriatrics of Sherbrooke; Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"Economic and Social Research Council; Medical Research Council; Age UK; Wellcome Trust","keywords":"CCL2; Monocyte; Inflammation; Phagocytosis; Internal medicine; Chemokine; Endocrinology; Medicine; Immunology","score_opus":0.024402769696402208,"score_gpt":0.2744649858080883,"score_spread":0.2500622161116861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2270886897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992943,0.0002014464,0.00006901487,0.000019678542,0.000005988535,0.000017222088,0.00021266492,0.0000021198616,0.00017749495],"genre_scores_gemma":[0.99879825,0.00014239727,0.00009575549,0.000042467258,0.000014376458,0.000023441557,0.0003971893,0.0000013357137,0.00048468268],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999759,0.00003891815,0.000023805012,0.000055023902,0.000049926264,0.00007326819],"domain_scores_gemma":[0.99953794,0.000021102647,0.0001304297,0.000042628275,0.00011655462,0.00015132074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005745293,0.00031891096,0.0004548368,0.000526232,0.00070361025,0.00049883913,0.00019696668,0.00072286086,0.0007936482],"category_scores_gemma":[0.000585521,0.00025696968,0.0005564826,0.0005462877,0.00016204303,0.00048160172,0.00040748142,0.0007436792,0.00034065743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010137246,0.0003464082,0.9946514,0.00001488223,0.000102256716,0.00025688534,0.00026507847,0.000025597625,0.0011045736,0.000008375255,0.00011154586,0.0020991545],"study_design_scores_gemma":[0.000010473311,0.00080019736,0.9983975,0.000004856896,0.000042766886,0.0001794969,0.0002024391,0.00005015065,0.000081898404,0.000009033837,0.00021584271,0.000005349871],"about_ca_topic_score_codex":0.004383723,"about_ca_topic_score_gemma":0.0050470205,"teacher_disagreement_score":0.004383723,"about_ca_system_score_codex":0.0002085442,"about_ca_system_score_gemma":0.00020566945,"threshold_uncertainty_score":0.008716404},"labels":[],"label_agreement":null},{"id":"W2274892172","doi":"10.4049/jimmunol.190.supp.113.8","title":"GITR potentiates anti-viral T cell immunity by limiting regulatory T cells (P1015)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lymphocytic choriomeningitis; Immune system; FOXP3; Immunology; CD8; Biology; T cell; Spleen; Population; Cytotoxic T cell; Medicine; In vitro","score_opus":0.005158122039436836,"score_gpt":0.18748269144573548,"score_spread":0.18232456940629865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2274892172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941784,0.0012571469,0.0009663583,0.00023538807,0.00008647675,0.000052964868,0.00059966627,0.00030793756,0.0023155184],"genre_scores_gemma":[0.9935104,0.00064576697,0.0014698667,0.00016039971,0.00004157808,0.00006345889,0.0008215394,0.00005003493,0.0032369064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997086,0.000047734437,0.000022311488,0.000054201795,0.00006671368,0.00010040251],"domain_scores_gemma":[0.9998136,0.000017317874,0.000053561904,0.000022986234,0.000010458382,0.00008211184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015998208,0.00065184076,0.00038517892,0.00023400012,0.00010923544,0.000361784,0.00047531165,0.00057826476,0.0032154615],"category_scores_gemma":[0.000144476,0.000197375,0.00037047823,0.00015504814,0.000406116,0.00021293647,0.00024907693,0.0018848017,0.0013177419],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037494086,0.000104468425,0.00011462499,0.000051426676,0.000007469073,0.00008406514,0.00000866745,0.00009961756,0.99767894,0.000064708176,0.000103115235,0.0013079117],"study_design_scores_gemma":[0.0002722918,0.005460025,0.0033542581,0.000026572741,0.00004879772,0.000796822,0.000058732654,0.0010656334,0.98426455,0.00008767446,0.004551281,0.000013386012],"about_ca_topic_score_codex":0.0004928612,"about_ca_topic_score_gemma":0.00077136746,"teacher_disagreement_score":0.0032154615,"about_ca_system_score_codex":0.00026188203,"about_ca_system_score_gemma":0.00024555132,"threshold_uncertainty_score":0.010756791},"labels":[],"label_agreement":null},{"id":"W2281176409","doi":"10.1096/fasebj.27.1_supplement.lb435","title":"New anti‐inflammatory benefits of antibiotics: Tulathromycin promotes apoptosis and efferocytosis, and inhibits pro‐inflammatory CXCL8 production in a model of porcine pleuropneumonia","year":2013,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Pfizer","keywords":"Efferocytosis; Apoptosis; Inflammation; Pleuropneumonia; TUNEL assay; In vivo; Immunology; Interleukin 8; Medicine; Microbiology; Macrophage; Chemistry; Biology; In vitro; Biochemistry","score_opus":0.011776779812693006,"score_gpt":0.20582385454441768,"score_spread":0.19404707473172467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2281176409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696488,0.020938722,0.0040002945,0.00086652156,0.00013596319,0.000094949835,0.00032988194,0.00015415672,0.0038308292],"genre_scores_gemma":[0.9785507,0.008878077,0.005492661,0.00017792308,0.0000865677,0.00007515811,0.00049369753,0.000022437758,0.0062227687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986553,0.00004392995,0.000015001106,0.000020832615,0.000031065912,0.000023570561],"domain_scores_gemma":[0.99992025,0.000016494756,0.000019730307,0.000008677879,0.000012568394,0.0000222674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027969555,0.00035072755,0.0002740392,0.0003521194,0.00012004681,0.00027984814,0.0002239677,0.00039068298,0.0017428476],"category_scores_gemma":[0.000120295466,0.00010769755,0.00018267379,0.00012637801,0.00021639379,0.00035807033,0.00016131814,0.0006323614,0.0002515945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077649683,0.00022438713,0.00018087051,0.00016811254,0.000009571435,0.00011168718,0.00001642924,0.00006686781,0.98658216,0.00012895514,0.00016097836,0.011573628],"study_design_scores_gemma":[0.00040285868,0.006300304,0.007959842,0.00006122803,0.000085874235,0.0011179149,0.000030549487,0.0012812869,0.9705804,0.00012391094,0.012045603,0.0000102140675],"about_ca_topic_score_codex":0.00032291643,"about_ca_topic_score_gemma":0.0010533053,"teacher_disagreement_score":0.0017428476,"about_ca_system_score_codex":0.00026002375,"about_ca_system_score_gemma":0.00021672873,"threshold_uncertainty_score":0.005830407},"labels":[],"label_agreement":null},{"id":"W2297180757","doi":"10.4049/jimmunol.182.supp.134.55","title":"Exploring the development of endotoxin tolerance and anti-endotoxin activity of LL-37 in mammalian cells (134.55)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immune system; Innate immune system; Inflammation; Immunology; Biology; Sepsis; Immunity; Peripheral blood mononuclear cell; Genetics","score_opus":0.028405586838045185,"score_gpt":0.2369727428951441,"score_spread":0.2085671560570989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2297180757","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9879028,0.0037956089,0.004785042,0.00017445942,0.00007223198,0.000046243196,0.0013506287,0.00009085064,0.0017821642],"genre_scores_gemma":[0.98803574,0.0017246804,0.004016093,0.0001514093,0.000014750375,0.00006610956,0.0018100854,0.000017332948,0.0041638813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983454,0.00002022835,0.000014081024,0.00003300929,0.00005159764,0.000046544974],"domain_scores_gemma":[0.99993944,0.000009729763,0.000016139295,0.000009293657,0.000012925762,0.000012590132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021997308,0.0002176546,0.0002870215,0.00018340594,0.0001361682,0.00039909952,0.0001302234,0.0001669927,0.0012510193],"category_scores_gemma":[0.00010031183,0.000093987226,0.00027426242,0.00026556253,0.000264801,0.00015134238,0.00017946106,0.00041556073,0.00043807313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005766585,0.000008776827,0.00021726699,0.000023575913,0.0000012190874,0.000013159918,0.00000990573,0.00001551693,0.9990324,0.000030399884,0.000026307527,0.00056389475],"study_design_scores_gemma":[0.000009296349,0.0003991472,0.013696579,0.000008234939,0.000017591761,0.000095519455,0.000056620018,0.00034302942,0.981729,0.000048503112,0.0035917116,0.000004872521],"about_ca_topic_score_codex":0.0015916836,"about_ca_topic_score_gemma":0.00148504,"teacher_disagreement_score":0.0015916836,"about_ca_system_score_codex":0.0003816221,"about_ca_system_score_gemma":0.00029539192,"threshold_uncertainty_score":0.0041850805},"labels":[],"label_agreement":null},{"id":"W2304898873","doi":"10.1038/labinvest.2016.46","title":"Inhibition of endotoxin-induced airway epithelial cell injury by a novel family of pyrrol derivates","year":2016,"lang":"en","type":"article","venue":"Laboratory Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"Instituto de Salud Carlos III","keywords":"Downregulation and upregulation; ARDS; Lipopolysaccharide; Apoptosis; Inflammation; Pharmacology; A549 cell; Tumor necrosis factor alpha; Immunology; Medicine; Chemistry; Lung; Internal medicine; Biochemistry","score_opus":0.00909097882989065,"score_gpt":0.2048285837576111,"score_spread":0.19573760492772044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2304898873","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98427814,0.0049779154,0.0054056747,0.0002309858,0.00006493184,0.00007977709,0.00032441222,0.00017748406,0.004460707],"genre_scores_gemma":[0.98783714,0.003436479,0.00422911,0.00013885186,0.00003895391,0.00005480922,0.00037687595,0.000018030176,0.003869735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999502,0.000007988487,0.000004082806,0.000011414294,0.0000089670975,0.000017406544],"domain_scores_gemma":[0.9999558,0.000007650451,0.000013037968,0.000005670874,0.0000052328955,0.000012708474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012791815,0.00033124737,0.00022122837,0.00020014624,0.00016927577,0.00018375338,0.00027161234,0.00022639551,0.0015952794],"category_scores_gemma":[0.0000976895,0.00009177799,0.00022136004,0.000109512555,0.00020398929,0.00026804474,0.00017755677,0.00040737248,0.00030482392],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009960622,0.00019027847,0.00023765923,0.000108715176,0.000012765771,0.0002781567,0.000042470918,0.00047389296,0.9796203,0.00059977995,0.0002434755,0.017196491],"study_design_scores_gemma":[0.00021223593,0.00518496,0.0036540832,0.000017202237,0.00003653304,0.00091450615,0.00002962726,0.0013895953,0.97490054,0.000173549,0.013467913,0.000019288203],"about_ca_topic_score_codex":0.00024072203,"about_ca_topic_score_gemma":0.0003502836,"teacher_disagreement_score":0.0015952794,"about_ca_system_score_codex":0.00017435387,"about_ca_system_score_gemma":0.00015803774,"threshold_uncertainty_score":0.0053367615},"labels":[],"label_agreement":null},{"id":"W2309481737","doi":"10.14740/jh249w","title":"Quantitative Expression of Toll-Like Receptors TLR-7 and TLR-9 on Peripheral Blood Mononuclear Cells in Leukemias","year":2016,"lang":"en","type":"article","venue":"Journal of Hematology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Peripheral blood mononuclear cell; Immunology; Medicine; Leukemia; Toll-like receptor; Myeloid leukemia; Immune system; Innate immune system; Receptor; Chronic lymphocytic leukemia; Acute leukemia; Myeloid; Biology; Internal medicine; In vitro","score_opus":0.010319244929918245,"score_gpt":0.23927395278855315,"score_spread":0.22895470785863492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2309481737","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99335515,0.0029662028,0.0021142387,0.000037180358,0.000016069145,0.000034759774,0.00059093616,0.000023283457,0.0008622191],"genre_scores_gemma":[0.99561226,0.00092177774,0.0021586271,0.00004692043,0.000024410998,0.00007931922,0.0006375494,0.000007071776,0.00051206065],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99955934,0.000100978235,0.00005475732,0.00010809583,0.00010756008,0.00006911981],"domain_scores_gemma":[0.9996476,0.00007923042,0.00014642051,0.000022921087,0.00007248099,0.000031300475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003402994,0.00018124415,0.00018781604,0.0006700538,0.00015440166,0.00034561544,0.00012505768,0.00029838772,0.0019441249],"category_scores_gemma":[0.00048613857,0.00011404472,0.00017721596,0.0003502484,0.00019632337,0.00019160734,0.00021837486,0.0002488915,0.00039231262],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018314287,0.00009499497,0.081811026,0.00038514336,0.000050226678,0.00031068706,0.00026643087,0.000111043104,0.9009251,0.00013064487,0.00013265858,0.013950578],"study_design_scores_gemma":[0.00015068891,0.002703421,0.59799576,0.000120786,0.00032939547,0.005978289,0.00125569,0.0017224952,0.3829068,0.0006668859,0.006128169,0.00004162081],"about_ca_topic_score_codex":0.00011530222,"about_ca_topic_score_gemma":0.00009901657,"teacher_disagreement_score":0.0019441249,"about_ca_system_score_codex":0.00013636219,"about_ca_system_score_gemma":0.0000753358,"threshold_uncertainty_score":0.006503761},"labels":[],"label_agreement":null},{"id":"W2310387205","doi":"10.1093/jnen/59.2.129","title":"B7 Expression and Antigen Presentation by Human Brain Endothelial Cells: Requirement for Proinflammatory Cytokines","year":2000,"lang":"en","type":"article","venue":"Journal of Neuropathology & Experimental Neurology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Proinflammatory cytokine; Immune system; Biology; Immunology; Antigen presentation; Cytokine; Antigen; T cell; Microglia; Antigen-presenting cell; Cell biology; Inflammation","score_opus":0.011732426403722084,"score_gpt":0.27027853683185643,"score_spread":0.25854611042813436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2310387205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969734,0.001502951,0.0007027804,0.00005372997,0.00000829528,0.000009831049,0.00010843044,0.000008842499,0.0006316777],"genre_scores_gemma":[0.9962599,0.001118856,0.00088614627,0.000042744683,0.000013061454,0.00003415566,0.00068939495,0.000005087181,0.00095069077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981755,0.00005260734,0.000013936235,0.000020739715,0.00003079917,0.00006440536],"domain_scores_gemma":[0.99987197,0.000033549113,0.000018100116,0.000016430218,0.000031277414,0.000028735896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016468186,0.0001466378,0.00013856635,0.00013006381,0.0001407927,0.00043083463,0.00009428649,0.00020101585,0.001141228],"category_scores_gemma":[0.0002160491,0.00010563164,0.00009292024,0.000099614255,0.000111904104,0.00020559023,0.00011959607,0.0002199496,0.00043940142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024969067,0.000038587285,0.0004915611,0.000029618786,0.0000037938662,0.0000819413,0.000033417033,0.00002700249,0.9978836,0.000074356096,0.000030118284,0.0010562813],"study_design_scores_gemma":[0.000058940255,0.00081040687,0.026737029,0.000022821918,0.000032427142,0.0008880658,0.00024975007,0.0012644406,0.96654975,0.00013792638,0.0032389748,0.000009423545],"about_ca_topic_score_codex":0.000976461,"about_ca_topic_score_gemma":0.000809651,"teacher_disagreement_score":0.001141228,"about_ca_system_score_codex":0.00016436778,"about_ca_system_score_gemma":0.00016935826,"threshold_uncertainty_score":0.003817737},"labels":[],"label_agreement":null},{"id":"W2312165991","doi":"10.1007/s00441-016-2387-9","title":"The role of IL-1β in Pseudomonas aeruginosa in lung infection","year":2016,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Pseudomonas aeruginosa; Lung; Immune system; Lung infection; Inflammation; Microbiology; Cytokine; Immunology; Interleukin; Biology; Bacteria; Medicine; Internal medicine","score_opus":0.02970677337362158,"score_gpt":0.35902070920828455,"score_spread":0.32931393583466295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312165991","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000569293,0.99917966,0.000067723115,0.00018223596,0.00023530945,0.000001823747,0.000008746934,0.0000025898976,0.0002649546],"genre_scores_gemma":[0.00041182016,0.9986482,0.000096904965,0.00013772552,0.00040467991,0.0000033956733,0.000013924517,6.9938017e-7,0.00028257986],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997738,0.000030376148,0.00004222083,0.000035996753,0.000091930226,0.000025783811],"domain_scores_gemma":[0.9996511,0.00014248963,0.00006584782,0.000010730637,0.00008905981,0.000040730632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069302006,0.0009891301,0.0015131163,0.0017082097,0.00025598396,0.00130583,0.0008279762,0.0013244704,0.0023222475],"category_scores_gemma":[0.00078970793,0.0002999782,0.00045108807,0.0017237024,0.0007020151,0.0015384473,0.001012384,0.0023922815,0.0016965154],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001375147,0.000066679575,0.00021923859,0.014900356,0.000066799425,0.00033476885,0.000062317136,0.00026122323,0.0036043187,0.00236306,0.028432854,0.9495509],"study_design_scores_gemma":[0.000033295055,0.000119587196,0.00096793554,0.0037767533,0.0001331383,0.0015664258,0.000090702866,0.00009216717,0.00096242473,0.0024298267,0.9898031,0.000024667388],"about_ca_topic_score_codex":0.00069754897,"about_ca_topic_score_gemma":0.0012554403,"teacher_disagreement_score":0.0023222475,"about_ca_system_score_codex":0.00044915124,"about_ca_system_score_gemma":0.0012986535,"threshold_uncertainty_score":0.00776875},"labels":[],"label_agreement":null},{"id":"W2312601304","doi":"10.1152/physrev.00009.2014","title":"NOD-Like Receptors: Versatile Cytosolic Sentinels","year":2014,"lang":"en","type":"review","venue":"Physiological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":352,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Biology; Receptor; Pattern recognition receptor; Cell biology; Innate immune system; Nod; Effector; Immune receptor; Acquired immune system; Rhodopsin-like receptors; Immune system; Gene; Genetics","score_opus":0.09017998726601302,"score_gpt":0.34898901382871383,"score_spread":0.25880902656270083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312601304","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018835727,0.99708265,0.00037218313,0.0003415786,0.0004586614,0.0000063299854,0.000019790312,0.000016527381,0.0015139342],"genre_scores_gemma":[0.0015442051,0.9954169,0.00030313406,0.00038203134,0.00038547145,0.0000114292325,0.00006281416,0.0000031169593,0.0018909452],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998129,0.000035922512,0.000019231273,0.000033466862,0.00007315511,0.000025388525],"domain_scores_gemma":[0.9998615,0.000039051905,0.000023461094,0.0000058537344,0.00004055477,0.000029628089],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000525666,0.0008832213,0.001052346,0.001377082,0.00017195052,0.0010533826,0.0010474424,0.0012232052,0.0023194994],"category_scores_gemma":[0.00040720418,0.00030175,0.00030436073,0.0010407602,0.00058937166,0.0015204338,0.0006749433,0.001875865,0.0029223575],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012882157,0.00005316429,0.00019606654,0.008113738,0.000054061587,0.00033855523,0.000059437927,0.00035291185,0.009905051,0.009635173,0.04177364,0.9293895],"study_design_scores_gemma":[0.000012827678,0.000040307976,0.00024728698,0.00061696913,0.00001769244,0.0008094097,0.000026156758,0.00004327698,0.0009222616,0.0013272298,0.9959268,0.000009783896],"about_ca_topic_score_codex":0.00030705612,"about_ca_topic_score_gemma":0.00045478754,"teacher_disagreement_score":0.0023194994,"about_ca_system_score_codex":0.000666513,"about_ca_system_score_gemma":0.0005280798,"threshold_uncertainty_score":0.007759452},"labels":[],"label_agreement":null},{"id":"W2314252327","doi":"10.1097/ccm.0b013e31825f7ac7","title":"Location, location, location—Unraveling the nuances of innate immune regulation*","year":2012,"lang":"en","type":"letter","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Innate immune system; Gerontology; Immune system; Immunology","score_opus":0.01734067802641651,"score_gpt":0.28101758995840714,"score_spread":0.2636769119319906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2314252327","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029827373,0.01193182,0.0006242999,0.97167146,0.009990871,0.0000061754668,0.000021192094,0.000017444761,0.0027538552],"genre_scores_gemma":[0.12428648,0.030187745,0.0017297665,0.69797283,0.13771692,0.0000404299,0.000037410842,0.00004345805,0.007985053],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984665,0.0007227956,0.00019623923,0.00018470906,0.00026797003,0.00016178541],"domain_scores_gemma":[0.99411386,0.004366411,0.00037968572,0.00020042043,0.00063414226,0.00030552366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002335786,0.00043937797,0.0012502385,0.00041793066,0.0018527886,0.0022832875,0.00091019046,0.01191135,0.0021171696],"category_scores_gemma":[0.008037243,0.00047159047,0.0004402603,0.0004457214,0.0035059215,0.004927481,0.0010576914,0.020797016,0.0015100014],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028668958,0.00006550793,0.0077667804,0.00034396775,0.00006725027,0.03580553,0.0020888152,0.00023715594,0.0021001738,0.019889565,0.8477253,0.083623216],"study_design_scores_gemma":[0.00017787643,0.00016515204,0.0074611967,0.0011007974,0.00011624475,0.07913037,0.0054759555,0.002027918,0.0009984366,0.06637526,0.8368167,0.00015413872],"about_ca_topic_score_codex":0.0025624132,"about_ca_topic_score_gemma":0.00595788,"teacher_disagreement_score":0.01191135,"about_ca_system_score_codex":0.0025710147,"about_ca_system_score_gemma":0.0012094394,"threshold_uncertainty_score":0.018654108},"labels":[],"label_agreement":null},{"id":"W2316508618","doi":"10.1097/shk.0000000000000132","title":"Effect of Deletion of cIAP2 on Intestinal Microcirculation in Mouse Endotoxemia and Polybacterial Sepsis","year":2014,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Intravital microscopy; Microcirculation; Sepsis; Lipopolysaccharide; Immunology; Inflammation; Video microscopy; Biology; Medicine; Internal medicine; Cell biology","score_opus":0.0037712279684715046,"score_gpt":0.22240352209879963,"score_spread":0.21863229413032811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2316508618","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966627,0.0008781397,0.0015317964,0.00008653292,0.000027835214,0.00004398158,0.00034072317,0.000054138887,0.00037429866],"genre_scores_gemma":[0.9920021,0.0009677602,0.004053451,0.000089902394,0.000018330864,0.00024155965,0.0006621402,0.000041329648,0.0019234779],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994481,0.00011511871,0.000068043024,0.00013476645,0.00009795683,0.00013604188],"domain_scores_gemma":[0.9994235,0.000050966308,0.00020360641,0.000055965447,0.000037956703,0.00022792292],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038477467,0.0008913679,0.000536786,0.00069569773,0.00026888118,0.00041819247,0.0003915898,0.0008623284,0.0011963124],"category_scores_gemma":[0.00021923459,0.00043108728,0.00041692352,0.00028950817,0.0006589913,0.00048846577,0.0004039083,0.0012701664,0.0003012105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008648466,0.00012959943,0.00025363668,0.00004120761,0.000007653052,0.00009068239,0.00002621952,0.0000736174,0.9979119,0.00005979649,0.00002024579,0.00052063674],"study_design_scores_gemma":[0.00014016473,0.002290113,0.011850301,0.000021303125,0.000058489786,0.0005086391,0.000105005965,0.0012422046,0.98257357,0.000068666675,0.0011251377,0.000016382379],"about_ca_topic_score_codex":0.00046220445,"about_ca_topic_score_gemma":0.0005831592,"teacher_disagreement_score":0.0011963124,"about_ca_system_score_codex":0.00033986772,"about_ca_system_score_gemma":0.0002618346,"threshold_uncertainty_score":0.0040020943},"labels":[],"label_agreement":null},{"id":"W2316550831","doi":"10.1155/2006/195957","title":"Tweaking Innate Immunity: The Promise of Innate Immunologicals as Anti‐Infectives","year":2006,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research; Ontario HIV Treatment Network; Bill and Melinda Gates Foundation","keywords":"Innate immune system; Biology; Pattern recognition receptor; TLR3; Acquired immune system; Immune system; Intrinsic immunity; TLR7; Immunology; TLR9; Innate lymphoid cell; Toll-like receptor; Proinflammatory cytokine; Antimicrobial peptides; Immunity; Chemokine; Microbiology; Inflammation; Antimicrobial; Genetics; Gene; Gene expression","score_opus":0.00425192866404711,"score_gpt":0.21570593603995844,"score_spread":0.21145400737591133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2316550831","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008499518,0.91777605,0.015528939,0.034791674,0.008233291,0.00004361583,0.00012830559,0.00029764595,0.014700842],"genre_scores_gemma":[0.12378552,0.79997027,0.017232051,0.022820966,0.010884616,0.00014072527,0.00018028464,0.00013784016,0.024847722],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99932563,0.00021116354,0.000033937165,0.000090367146,0.00023004803,0.0001088866],"domain_scores_gemma":[0.9989532,0.00050167827,0.000097314885,0.0000803769,0.00018372033,0.00018370368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021477728,0.0005774816,0.000811192,0.0005529085,0.0004015574,0.0023277327,0.0008118505,0.0017312866,0.00476751],"category_scores_gemma":[0.0018212472,0.0002540631,0.00042238808,0.00032018012,0.0026458688,0.004481536,0.0015134744,0.004388674,0.0019949488],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007111221,0.00022451436,0.00093205075,0.0033692042,0.000097057826,0.00051219884,0.0005806916,0.0012053383,0.0705517,0.23943505,0.060283024,0.622098],"study_design_scores_gemma":[0.00007855632,0.0004735542,0.000547457,0.0006817331,0.00004238915,0.00059063593,0.00026527172,0.0010560731,0.01549055,0.092166476,0.8885424,0.00006495248],"about_ca_topic_score_codex":0.00033431555,"about_ca_topic_score_gemma":0.00048284832,"teacher_disagreement_score":0.00476751,"about_ca_system_score_codex":0.00081078126,"about_ca_system_score_gemma":0.00085255574,"threshold_uncertainty_score":0.015948892},"labels":[],"label_agreement":null},{"id":"W2317249620","doi":"10.1097/pcc.0b013e31825b84ce","title":"Effect of continuous blood purification on concentrations of plasma vasoactive substances and cardiac function in endotoxic shock","year":2012,"lang":"en","type":"article","venue":"Pediatric Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Lipopolysaccharide; Septic shock; Medicine; Shock (circulatory); Whole blood; Sepsis; Pharmacology; Internal medicine","score_opus":0.007088488126275218,"score_gpt":0.26238135138339286,"score_spread":0.25529286325711764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2317249620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968839,0.0019538049,0.0003846114,0.000068298286,0.00010345784,0.0003631495,0.000054961973,0.000017205324,0.00017053458],"genre_scores_gemma":[0.9950558,0.0015937487,0.0013067647,0.00018586204,0.0002741286,0.0010543071,0.00012893762,0.0000047069952,0.00039578183],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.99937636,0.00025962418,0.000064769454,0.00010217848,0.00009849544,0.00009856497],"domain_scores_gemma":[0.9990025,0.0002427725,0.00029249175,0.00007991935,0.000071655086,0.00031068464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010205825,0.00071883353,0.0014330995,0.0002657292,0.00023795203,0.00043790363,0.0005254223,0.00084118306,0.0014372962],"category_scores_gemma":[0.0010329304,0.00027142646,0.00053235894,0.00022028372,0.0007321349,0.0005259472,0.00032043448,0.0012509682,0.00014072921],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.82138354,0.07848351,0.004094678,0.0014101227,0.00061684527,0.00013430299,0.00008320736,0.00049174484,0.04188434,0.0001497805,0.00032939337,0.05093837],"study_design_scores_gemma":[0.10017701,0.8766422,0.010204136,0.00007554922,0.00039519268,0.00008406058,0.000050719074,0.00058398594,0.011031177,0.000057279245,0.0006797154,0.000019015173],"about_ca_topic_score_codex":0.0001802499,"about_ca_topic_score_gemma":0.00020514044,"teacher_disagreement_score":0.0014372962,"about_ca_system_score_codex":0.00019199634,"about_ca_system_score_gemma":0.0005028347,"threshold_uncertainty_score":0.005397439},"labels":[],"label_agreement":null},{"id":"W2319707062","doi":"10.1097/shk.0b013e318296e65b","title":"CD4+CD25+ Regulatory T Cells Attenuate Lipopolysaccharide-Induced Systemic Inflammatory Responses and Promotes Survival in Murine Escherichia coli Infection","year":2013,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Proinflammatory cytokine; IL-2 receptor; FOXP3; Immunology; Lipopolysaccharide; Immune system; Inflammation; Adoptive cell transfer; Immune tolerance; Biology; Medicine; T cell","score_opus":0.01099129124871094,"score_gpt":0.22170234765775254,"score_spread":0.2107110564090416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2319707062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98947984,0.0027922215,0.0042403024,0.00030507488,0.00021081216,0.00017323828,0.00032656797,0.0003779881,0.0020940232],"genre_scores_gemma":[0.9880725,0.0015897056,0.0034009395,0.00027158012,0.00010945624,0.0002243135,0.00040048198,0.00006228308,0.0058687557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997435,0.00005454578,0.000027100179,0.000039508253,0.000052576863,0.00008284038],"domain_scores_gemma":[0.9997497,0.000020951931,0.0000620178,0.000030268711,0.000028750117,0.0001083621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028327125,0.0010964564,0.00060143194,0.00056568475,0.00026348364,0.00029198432,0.00031094087,0.0005065693,0.001470128],"category_scores_gemma":[0.00023210452,0.00020340757,0.00029339493,0.00012947456,0.00036763406,0.0002478283,0.00023273208,0.0012576764,0.00039075487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017652102,0.0008435171,0.00025119938,0.00009191038,0.000013545653,0.00010086142,0.000049213766,0.0004405202,0.9898808,0.00013475002,0.00019025538,0.0062381774],"study_design_scores_gemma":[0.00043584805,0.012176261,0.0049316,0.00005541535,0.00009028488,0.00031119055,0.000073316085,0.0034119692,0.97290015,0.00018988602,0.005398185,0.000025961186],"about_ca_topic_score_codex":0.00061982713,"about_ca_topic_score_gemma":0.0010444048,"teacher_disagreement_score":0.001470128,"about_ca_system_score_codex":0.00020932712,"about_ca_system_score_gemma":0.00032740977,"threshold_uncertainty_score":0.004918039},"labels":[],"label_agreement":null},{"id":"W2319994857","doi":"10.1038/sj.gt.3301482","title":"Identification of methylated CpG motifs as inhibitors of the immune stimulatory CpG motifs","year":2001,"lang":"en","type":"article","venue":"Gene Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"CpG site; Biology; DNA methylation; DNA; Immune system; Molecular biology; Plasmid; Methylated DNA immunoprecipitation; Gene; Biochemistry; Gene expression; Immunology","score_opus":0.00990124411316648,"score_gpt":0.24110257281769265,"score_spread":0.23120132870452617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2319994857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9527179,0.01249459,0.025266642,0.00025575826,0.00012467183,0.00018043508,0.00032802013,0.00016092183,0.008471036],"genre_scores_gemma":[0.98295087,0.0030043945,0.008340707,0.000110543304,0.00003303843,0.00007762103,0.00035537683,0.000025815618,0.005101609],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999193,0.000017150343,0.0000041689605,0.000012207697,0.000023890003,0.000023333878],"domain_scores_gemma":[0.99991035,0.000029294175,0.000017565788,0.0000078213025,0.000016405296,0.000018504912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027375142,0.00036592403,0.0002527512,0.00024837523,0.00012836339,0.000285519,0.0003030699,0.00027707542,0.0017777485],"category_scores_gemma":[0.00027433303,0.0001672539,0.00019935964,0.000118455195,0.00016492039,0.00017126017,0.0001914481,0.00053857896,0.00030847156],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035129997,0.00004395894,0.00017429727,0.000047787747,0.000009666586,0.00003730686,0.000010341341,0.0003501821,0.9902042,0.00069992745,0.00006253601,0.00800853],"study_design_scores_gemma":[0.000023428684,0.00033278225,0.0005157244,0.000005029224,0.000017741371,0.000085267224,0.0000051941265,0.0010997378,0.99504197,0.000115866365,0.0027537476,0.0000033910023],"about_ca_topic_score_codex":0.00031347416,"about_ca_topic_score_gemma":0.00064565014,"teacher_disagreement_score":0.0017777485,"about_ca_system_score_codex":0.0002634633,"about_ca_system_score_gemma":0.00019985504,"threshold_uncertainty_score":0.005947113},"labels":[],"label_agreement":null},{"id":"W2320448647","doi":"10.1097/qad.0000000000000381","title":"Soluble Toll-like receptor 2 is significantly elevated in HIV-1 infected breast milk and inhibits HIV-1 induced cellular activation, inflammation and infection","year":2014,"lang":"en","type":"article","venue":"AIDS","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; National Institutes of Health; Ministerio de Economía y Competitividad","keywords":"TLR2; Proinflammatory cytokine; Breast milk; Gp41; Immunology; Chemokine; Inflammation; Receptor; Biology; Toll-like receptor; Innate immune system; Medicine; Immune system; Internal medicine; TLR4; Antigen","score_opus":0.007479409605612583,"score_gpt":0.2036631250640648,"score_spread":0.19618371545845223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320448647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947562,0.0041103773,0.0003303591,0.00007971333,0.000020353596,0.000013015276,0.000143814,0.000029509127,0.00051658077],"genre_scores_gemma":[0.9953833,0.0018138315,0.00090580067,0.00007094347,0.000030800464,0.00002502807,0.00047001912,0.0000073767806,0.0012928363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981433,0.000034253633,0.000012795154,0.000022770098,0.000056236702,0.00005967698],"domain_scores_gemma":[0.9998863,0.000017876759,0.00003800935,0.000008250728,0.000022689537,0.000026915726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001901158,0.00030355164,0.0002808229,0.00023881365,0.00016086838,0.0003848238,0.0001138955,0.00021332198,0.0011865891],"category_scores_gemma":[0.00030913722,0.00011636521,0.00014414024,0.00013626847,0.00016606475,0.00010601348,0.00019226086,0.0002910355,0.0002550378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051698217,0.00004233383,0.0026424695,0.000084285115,0.000014000949,0.00014525504,0.000028530736,0.000021934686,0.99367106,0.00001971831,0.00005868179,0.0027548335],"study_design_scores_gemma":[0.0000870452,0.0018654014,0.12711692,0.00007697992,0.00009029465,0.0024773811,0.00031141212,0.0008788815,0.86089385,0.000089101944,0.0061023454,0.000010391973],"about_ca_topic_score_codex":0.00040561226,"about_ca_topic_score_gemma":0.0005516846,"teacher_disagreement_score":0.0011865891,"about_ca_system_score_codex":0.00020477558,"about_ca_system_score_gemma":0.00023153804,"threshold_uncertainty_score":0.0039694905},"labels":[],"label_agreement":null},{"id":"W2320576932","doi":"10.1016/j.cjca.2011.07.216","title":"288 IL-10 induced cardiomyocyte survival is mediated by CD14 and MyD88 activation","year":2011,"lang":"en","type":"article","venue":"Canadian Journal of Cardiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Research Manitoba","funders":"","keywords":"TLR4; Apoptosis; Cell biology; Signal transduction; Medicine; Phosphorylation; Stimulation; Tumor necrosis factor alpha; Poly ADP ribose polymerase; Programmed cell death; Immunology; Internal medicine; Biology; Biochemistry; Enzyme; Polymerase","score_opus":0.02240895163792464,"score_gpt":0.2085454250634144,"score_spread":0.18613647342548975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320576932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876609,0.0042285114,0.0026932552,0.0005441236,0.00022387604,0.00008077166,0.00039960814,0.00005632063,0.0041127168],"genre_scores_gemma":[0.99074674,0.001109567,0.0016728012,0.00013608299,0.00005931932,0.00009251416,0.0004569498,0.000015726468,0.0057103634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959975,0.00006136211,0.000034055425,0.000059374175,0.00009199272,0.00015343989],"domain_scores_gemma":[0.9998511,0.000013748114,0.000040966075,0.000015463997,0.00002752539,0.00005107771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020840406,0.00041294727,0.0003500037,0.00023337359,0.00026297293,0.00030815587,0.00022239474,0.00037322697,0.0038931225],"category_scores_gemma":[0.00016080642,0.0002911396,0.0005505358,0.00008576373,0.00029564294,0.0002455855,0.0004637166,0.0011147535,0.0010873901],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013476583,0.00008427577,0.00059838063,0.00008522244,0.000016471411,0.00016386373,0.000021777458,0.000031282892,0.9949007,0.00012625198,0.00016959211,0.0024543938],"study_design_scores_gemma":[0.00049819954,0.0013729976,0.1074468,0.00007290916,0.00007665265,0.0010448622,0.0003048642,0.0012753408,0.8820329,0.00027361506,0.0055793463,0.000021552318],"about_ca_topic_score_codex":0.00055982056,"about_ca_topic_score_gemma":0.0012221513,"teacher_disagreement_score":0.0038931225,"about_ca_system_score_codex":0.00033891678,"about_ca_system_score_gemma":0.00035429632,"threshold_uncertainty_score":0.013023853},"labels":[],"label_agreement":null},{"id":"W2320886549","doi":"10.1016/j.vetimm.2016.04.002","title":"Characterization of host responses induced by Toll-like receptor ligands in chicken cecal tonsil cells","year":2016,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Poultry Industry Council; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Canadian Poultry Research Council","keywords":"Biology; TLR2; Innate immune system; TLR4; Toll-like receptor; TLR5; Immune system; Lipopolysaccharide; CpG Oligodeoxynucleotide; TLR9; Immunology; Cathelicidin; Context (archaeology); Microbiology; Pattern recognition receptor; Receptor; Pathogen-associated molecular pattern; Beta defensin; Cytokine; Gene expression; Gene","score_opus":0.011905736263087883,"score_gpt":0.23109074362068474,"score_spread":0.21918500735759686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320886549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971583,0.0005760831,0.0004930889,0.00003696261,0.00001292837,0.000028010498,0.00027298756,0.000006397445,0.001415104],"genre_scores_gemma":[0.9957229,0.00047667598,0.0008764395,0.00006426871,0.000016260587,0.00007619966,0.00094925397,0.0000048185116,0.0018131064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999902,0.000016806263,0.000013057673,0.000017845989,0.000015407797,0.000034847966],"domain_scores_gemma":[0.99992573,0.000019560523,0.000007974561,0.00001074649,0.000015894224,0.000020066866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000102344246,0.00017003235,0.0001413643,0.0002337602,0.00021919823,0.00032129345,0.00009815012,0.00020153171,0.0014339752],"category_scores_gemma":[0.000082869075,0.00008299514,0.00019640387,0.00018382419,0.0001731019,0.00023780346,0.00016770247,0.00040398553,0.0004210341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022234092,0.000023684834,0.0014141431,0.000032861317,0.0000024751675,0.00013677026,0.000062501225,0.000014690926,0.99730116,0.000063018764,0.00001696462,0.0007093957],"study_design_scores_gemma":[0.0000947275,0.0014795718,0.20952846,0.000036533387,0.0000822536,0.0016119923,0.00224647,0.0013120318,0.7755613,0.00017031205,0.007854141,0.000022183525],"about_ca_topic_score_codex":0.00046313592,"about_ca_topic_score_gemma":0.0007358659,"teacher_disagreement_score":0.0014339752,"about_ca_system_score_codex":0.00013360067,"about_ca_system_score_gemma":0.00013306401,"threshold_uncertainty_score":0.004797101},"labels":[],"label_agreement":null},{"id":"W2321317091","doi":"10.18632/oncotarget.8326","title":"XB130 deficiency enhances lipopolysaccharide-induced septic response and acute lung injury","year":2016,"lang":"en","type":"article","venue":"Oncotarget","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Medicine; Inflammatory response; Tumor necrosis factor alpha; Lipopolysaccharide; Apoptosis; Monocyte; Internal medicine; Immunology; Inflammation; Biology","score_opus":0.007103714149166277,"score_gpt":0.25752892572344727,"score_spread":0.250425211574281,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321317091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99407494,0.0022635038,0.0018252465,0.00023742864,0.00005626349,0.000055997338,0.00035030497,0.00007582634,0.0010603449],"genre_scores_gemma":[0.99182457,0.0020243695,0.0021109579,0.00014080059,0.00003109218,0.000106393825,0.00055878435,0.000028680113,0.0031743918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997993,0.000028266111,0.000025032885,0.000024420231,0.000059449212,0.000063496205],"domain_scores_gemma":[0.9998528,0.000009320624,0.000059338818,0.000006783259,0.0000123192385,0.000059484715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020341435,0.00048512206,0.0003520165,0.00042505778,0.00017156861,0.00027114945,0.00021165096,0.00036516768,0.0023439773],"category_scores_gemma":[0.00010584056,0.00020832379,0.0003466673,0.00021572386,0.00039426106,0.00030991065,0.00031850534,0.0010502808,0.00051236653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066297065,0.00010744202,0.0004435212,0.000077810444,0.0000068213035,0.00017537094,0.000019475146,0.000045081782,0.99692935,0.00009327498,0.000074866264,0.0013640565],"study_design_scores_gemma":[0.00032490375,0.0028926698,0.027817873,0.00005685929,0.00008822923,0.0014762749,0.00023923775,0.0022162504,0.96139723,0.00018329232,0.0032885328,0.000018672295],"about_ca_topic_score_codex":0.00037462363,"about_ca_topic_score_gemma":0.00046678865,"teacher_disagreement_score":0.0023439773,"about_ca_system_score_codex":0.00026650098,"about_ca_system_score_gemma":0.00032843865,"threshold_uncertainty_score":0.007841408},"labels":[],"label_agreement":null},{"id":"W2323017874","doi":"10.1055/s-0028-1089350","title":"Expression funktioneller TLR und NOD Proteine in humanen mesenterialen Präadipozyten","year":2008,"lang":"de","type":"article","venue":"Zeitschrift für Gastroenterologie","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"NOD2; NOD1; Molecular biology; Medicine; Biology; Receptor; Innate immune system; Genetics","score_opus":0.02450588623125845,"score_gpt":0.2759020481654188,"score_spread":0.25139616193416037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2323017874","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9747292,0.017730014,0.0028788284,0.0002547151,0.00015064179,0.00007223303,0.0014213461,0.000065735694,0.002697247],"genre_scores_gemma":[0.9668597,0.011790544,0.006461092,0.00023120124,0.0001282893,0.00028668554,0.0045906445,0.000027228878,0.0096246675],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998709,0.000024862322,0.000015473597,0.000035077075,0.00003208513,0.000021604055],"domain_scores_gemma":[0.9999107,0.000031493633,0.000012626625,0.000014223546,0.0000145383965,0.000016368076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025353537,0.00018427204,0.00013507003,0.00040415654,0.00014428394,0.00032640406,0.00008069024,0.00028643405,0.003114397],"category_scores_gemma":[0.00026368618,0.00011087475,0.00019290263,0.00034672828,0.00017127521,0.0002021888,0.0002289876,0.00032223735,0.0010918982],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049166346,0.000040156923,0.0036622726,0.00018944716,0.000011533384,0.00030533626,0.00009300061,0.000039824437,0.9885583,0.0001192556,0.0002512411,0.006237973],"study_design_scores_gemma":[0.00028460694,0.0026003646,0.1750594,0.00010642771,0.00018403638,0.0116434675,0.0007152633,0.0010966444,0.7195474,0.0005352489,0.08819645,0.000030610867],"about_ca_topic_score_codex":0.00011149924,"about_ca_topic_score_gemma":0.00011262885,"teacher_disagreement_score":0.003114397,"about_ca_system_score_codex":0.00011979433,"about_ca_system_score_gemma":0.00009508566,"threshold_uncertainty_score":0.010418713},"labels":[],"label_agreement":null},{"id":"W2323594393","doi":"10.1177/1753425916632304","title":"Enhancing actions of peptides derived from the γ-chain of fetal human hemoglobin on the immunostimulant activities of monophosphoryl lipid A","year":2016,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Chemistry; Hemoglobin; Peptide; Activator (genetics); Lipid A; Biochemistry; Biophysics; Biology; Immunology; Receptor; Lipopolysaccharide","score_opus":0.02072427003694455,"score_gpt":0.24640050271421826,"score_spread":0.2256762326772737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2323594393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99887043,0.00046280393,0.0003632418,0.000011399206,0.000005167559,0.0000081330145,0.000023042607,0.0000036755196,0.00025212715],"genre_scores_gemma":[0.9982693,0.00047539262,0.0008234778,0.000027811813,0.00000752015,0.000010875402,0.000062964726,0.0000023053778,0.0003203895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995637,0.000014324687,0.000002954412,0.000006131868,0.000008115546,0.000012114774],"domain_scores_gemma":[0.9999417,0.000020865378,0.000013996161,0.0000048027314,0.0000061079595,0.000012549728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011171049,0.00023187978,0.00008390574,0.00009517438,0.000037807353,0.000081484584,0.000066464934,0.000112374815,0.00050768664],"category_scores_gemma":[0.00010922586,0.000049102724,0.000089397836,0.00005012627,0.000098911165,0.00008245469,0.000094529845,0.00020279872,0.000072765186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010093267,0.00001927554,0.00005815466,0.000017195813,0.0000012169128,0.000018079601,0.0000065220283,0.000034299534,0.9987245,0.000013603656,0.000004368472,0.0010017501],"study_design_scores_gemma":[0.000015687574,0.0009925065,0.0031391731,0.000005328223,0.000009112165,0.00008043769,0.000012018598,0.00036665596,0.9948782,0.0000217785,0.0004771208,0.0000020192472],"about_ca_topic_score_codex":0.00011078176,"about_ca_topic_score_gemma":0.00013648343,"teacher_disagreement_score":0.00050768664,"about_ca_system_score_codex":0.00005175734,"about_ca_system_score_gemma":0.00006216587,"threshold_uncertainty_score":0.0016983747},"labels":[],"label_agreement":null},{"id":"W2324019217","doi":"10.1158/1538-7445.am10-5279","title":"Abstract 5279: LPS-TLR4 binding increases metastatic potential of colorectal cancer cells","year":2010,"lang":"en","type":"article","venue":"Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Fibronectin; Medicine; Colorectal cancer; TLR4; Cancer cell; Receptor; Cancer research; Lipopolysaccharide; Cancer; Flow cytometry; Extracellular matrix; Pathology; Immunology; Internal medicine; Biology; Cell biology","score_opus":0.033355040908143556,"score_gpt":0.36010976596776656,"score_spread":0.326754725059623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2324019217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98769987,0.0024383063,0.0017421263,0.0004484272,0.00014227814,0.00005735917,0.0016241004,0.00012617087,0.00572141],"genre_scores_gemma":[0.9810976,0.0014449372,0.0018019426,0.00026834823,0.000065504,0.00013469084,0.0040278863,0.000021909578,0.011137294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982363,0.000030411808,0.000010816325,0.000026796433,0.000051858628,0.00005644145],"domain_scores_gemma":[0.9999187,0.000017394645,0.0000112450825,0.0000063114458,0.000019433854,0.00002698152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000095929456,0.00035017362,0.00030067138,0.00027295473,0.00020277165,0.0002191815,0.00013448553,0.00034240767,0.012062806],"category_scores_gemma":[0.00010750025,0.00014465408,0.00036867082,0.0002264633,0.00011784736,0.00013506011,0.0002563227,0.00065045967,0.0018023726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003115435,0.00011826447,0.000374327,0.00010629261,0.000009296962,0.00008319001,0.000014324195,0.00003925359,0.9968086,0.000041719333,0.00044568614,0.0016475031],"study_design_scores_gemma":[0.00012502278,0.002478243,0.023485955,0.00003169686,0.000040478244,0.00075385656,0.000116159565,0.0015878334,0.9648445,0.000070399125,0.0064546727,0.00001122851],"about_ca_topic_score_codex":0.00085688237,"about_ca_topic_score_gemma":0.0006692242,"teacher_disagreement_score":0.012062806,"about_ca_system_score_codex":0.00019176159,"about_ca_system_score_gemma":0.00017729032,"threshold_uncertainty_score":0.040354133},"labels":[],"label_agreement":null},{"id":"W2325876195","doi":"10.3899/jrheum.110378","title":"Soluble CD14 and CD14 Polymorphisms in Rheumatoid Arthritis","year":2011,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Iowa City Veterans Affairs Medical Center; U.S. Department of Veterans Affairs","keywords":"Medicine; Rheumatoid arthritis; CD14; Internal medicine; Body mass index; SNP; Single-nucleotide polymorphism; Immunology; Disease; Logistic regression; Arthritis; Immune system; Genotype; Gene; Biology; Genetics","score_opus":0.012859939477212435,"score_gpt":0.20685181665895847,"score_spread":0.19399187718174604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2325876195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957235,0.0030298564,0.0005627267,0.00013787554,0.00001603328,0.000008137245,0.00019821555,0.000008053541,0.0003156508],"genre_scores_gemma":[0.99863476,0.00039932432,0.00053524703,0.000024396904,0.00002910766,0.000007680635,0.00013941064,0.0000017872808,0.00022817416],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99943894,0.00022420476,0.00007244113,0.000113329035,0.00010648267,0.000044503962],"domain_scores_gemma":[0.9979917,0.0008803549,0.0007156699,0.00006988531,0.00017649741,0.00016584192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008418081,0.0003603943,0.00031355544,0.0005189768,0.00021691581,0.00037171753,0.0002391559,0.00049804075,0.0016663134],"category_scores_gemma":[0.0026235164,0.00016965566,0.0003825263,0.0008283691,0.00025807356,0.00021914158,0.00030328464,0.00042011502,0.0002368147],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004993301,0.00002982599,0.9943402,0.000029232342,0.00012509913,0.000104871004,0.000017675242,0.00019860615,0.0012374619,0.00003617908,0.00007060845,0.0033108827],"study_design_scores_gemma":[0.000033386554,0.00023365245,0.99579984,0.000026174035,0.00012153376,0.0009930101,0.000027405888,0.0015810644,0.000615924,0.0001271185,0.00043536947,0.000005335428],"about_ca_topic_score_codex":0.0008725471,"about_ca_topic_score_gemma":0.00075356424,"teacher_disagreement_score":0.0016663134,"about_ca_system_score_codex":0.00014375604,"about_ca_system_score_gemma":0.00021647861,"threshold_uncertainty_score":0.0055743456},"labels":[],"label_agreement":null},{"id":"W2326217713","doi":"10.1097/ccm.0000000000000270","title":"Could Altered Leukocyte Gene Expression Profile in Trauma Patients Guide Immune Interventions to Prevent Gram-Negative Bacteremia?*","year":2014,"lang":"en","type":"letter","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St. Paul's Hospital","funders":"","keywords":"Medicine; Sirius; Genomics; Intensive care medicine; Family medicine; Genetics; Gene; Genome; Biology","score_opus":0.02728802010831433,"score_gpt":0.32445123878131527,"score_spread":0.29716321867300094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2326217713","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0057183984,0.003387924,0.00051044987,0.9785472,0.0057352055,0.00002053947,0.000051949228,0.000034279936,0.0059939898],"genre_scores_gemma":[0.15833531,0.009147323,0.0016641001,0.75202626,0.06525954,0.000070081165,0.00010552967,0.000041380277,0.013350434],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99938047,0.00023655679,0.0000908843,0.000082435385,0.00010545799,0.00010417769],"domain_scores_gemma":[0.99767953,0.0015023226,0.00014374475,0.00008955156,0.00040833253,0.0001764991],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012844409,0.00038112546,0.0008170989,0.00041487065,0.0009854457,0.0012245295,0.0007790513,0.012734519,0.003613061],"category_scores_gemma":[0.008812467,0.00021504759,0.000669361,0.00031409878,0.0015634736,0.0017770597,0.00043290254,0.011998789,0.002550193],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007888207,0.00030070482,0.03763303,0.00022380974,0.00010417514,0.08240641,0.00070340757,0.0005768329,0.0024190869,0.013233828,0.7518454,0.10976451],"study_design_scores_gemma":[0.0008581392,0.00095525227,0.037294615,0.0017267701,0.0003199421,0.15696786,0.0038252112,0.0072497735,0.0034736912,0.100929774,0.6861282,0.0002708],"about_ca_topic_score_codex":0.0018137402,"about_ca_topic_score_gemma":0.00217409,"teacher_disagreement_score":0.012734519,"about_ca_system_score_codex":0.0017881604,"about_ca_system_score_gemma":0.0009948029,"threshold_uncertainty_score":0.012974024},"labels":[],"label_agreement":null},{"id":"W2327033564","doi":"10.1097/00007890-200308271-00040","title":"COMBINATION OF RAPAMYCIN AND ANTI-LFA-1 PREVENTS REJECTION OF RAT ISLET XENOGRAFTS.","year":2003,"lang":"en","type":"article","venue":"Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Islet; Sirolimus; Medicine; Cancer research; Pharmacology; Internal medicine; Insulin","score_opus":0.007908454682439297,"score_gpt":0.22394133619737763,"score_spread":0.21603288151493832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327033564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811282,0.011873609,0.0012370726,0.00061752845,0.00059839553,0.000094355775,0.00040309675,0.0003973974,0.0036503894],"genre_scores_gemma":[0.9888215,0.0052817743,0.0017973125,0.00017199444,0.0003167259,0.00009150109,0.0006571309,0.000049284045,0.0028127867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960226,0.00009276,0.000021739681,0.000045111876,0.00008337519,0.00015481461],"domain_scores_gemma":[0.9995678,0.000053283227,0.00010830313,0.000037788548,0.000016667262,0.00021611199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038009085,0.00074298284,0.0013530247,0.00096309034,0.00026406307,0.0005008982,0.00056052586,0.00062258047,0.0013231252],"category_scores_gemma":[0.0002753059,0.00031248233,0.00048387673,0.00045611867,0.00055044243,0.00045292138,0.00025525867,0.0018876402,0.0007269152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.017877702,0.006395996,0.0015266817,0.00047276219,0.0004610241,0.00042707755,0.00007183517,0.0012924081,0.9261229,0.00039361903,0.003410606,0.041547496],"study_design_scores_gemma":[0.0042607365,0.0960984,0.028140148,0.00011486255,0.0008238609,0.0021583415,0.00021280747,0.0033588319,0.8489418,0.00041626242,0.01537627,0.000097646436],"about_ca_topic_score_codex":0.0010741216,"about_ca_topic_score_gemma":0.003624889,"teacher_disagreement_score":0.0013530247,"about_ca_system_score_codex":0.000376906,"about_ca_system_score_gemma":0.000866177,"threshold_uncertainty_score":0.0044263005},"labels":[],"label_agreement":null},{"id":"W2327125795","doi":"10.3748/wjg.v20.i48.18390","title":"Increased expression of tumor necrosis factor-α is associated with advanced colorectal cancer stages","year":2014,"lang":"en","type":"article","venue":"World Journal of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":155,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"","keywords":"Colorectal cancer; Tumor necrosis factor alpha; Immunohistochemistry; Tissue microarray; Medicine; Reverse transcription polymerase chain reaction; Cancer; Pathology; Gene expression; Cancer research; Oncology; Internal medicine; Biology; Gene","score_opus":0.005895687619245405,"score_gpt":0.22499953874366613,"score_spread":0.2191038511244207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327125795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99900913,0.0005932899,0.00012762868,0.000016041055,0.0000037707487,0.0000045109814,0.00009650912,0.0000038626295,0.0001451844],"genre_scores_gemma":[0.99927086,0.0002867706,0.00015599301,0.000008605477,0.000006302282,0.0000030077185,0.00014377535,7.2282927e-7,0.00012399035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998777,0.000020093745,0.0000198637,0.00002656901,0.000035745183,0.000019986568],"domain_scores_gemma":[0.9993105,0.00008304254,0.00041677538,0.000022470367,0.000089100984,0.000078101766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013969773,0.00017408228,0.00016110492,0.00044540412,0.00012121723,0.00025248,0.00007767961,0.00017812416,0.00093802135],"category_scores_gemma":[0.0005843079,0.000095769414,0.0001195995,0.00038584045,0.00016168418,0.00012366951,0.00013527574,0.00016553214,0.0001799959],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071332237,0.000021560487,0.9597902,0.000067355744,0.000029144754,0.00024008246,0.000082106155,0.000056990983,0.035164118,0.000012212,0.000054198823,0.0037686063],"study_design_scores_gemma":[0.000010138224,0.00022894618,0.99276054,0.000008309386,0.000030820338,0.0013496712,0.0001322157,0.00023296197,0.0046614707,0.00001486553,0.0005665721,0.0000035961723],"about_ca_topic_score_codex":0.0009205754,"about_ca_topic_score_gemma":0.00110046,"teacher_disagreement_score":0.00093802135,"about_ca_system_score_codex":0.00013522609,"about_ca_system_score_gemma":0.00010149996,"threshold_uncertainty_score":0.0031380057},"labels":[],"label_agreement":null},{"id":"W2327333444","doi":"10.1038/sj.gene.6363732","title":"LPS-hyporesponsiveness of mnd mice is associated with a mutation in Toll-like receptor 4","year":2001,"lang":"en","type":"article","venue":"Genes and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal General Hospital; McGill University","funders":"","keywords":"Biology; TLR4; Frameshift mutation; Mutation; Lipopolysaccharide; Transmembrane protein; Toll-like receptor; Innate immune system; Receptor; Immune system; Cell biology; Exon; TLR2; Signal transduction; Transmembrane domain; Genetics; Bacterial outer membrane; Immunology; Gene","score_opus":0.011428055866753332,"score_gpt":0.22604840610692636,"score_spread":0.21462035024017304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2327333444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99271095,0.0005608439,0.002671418,0.00039858103,0.00012775318,0.000063330226,0.0018454674,0.00037520114,0.0012463203],"genre_scores_gemma":[0.9917759,0.00041304878,0.0023026522,0.000244539,0.00007614817,0.00010744023,0.0011450426,0.00022586156,0.003709437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929905,0.00013676105,0.00010557398,0.00018496765,0.00013433039,0.0001392535],"domain_scores_gemma":[0.99816763,0.0002317321,0.00077516417,0.00013828294,0.00006584925,0.0006214716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003220657,0.0020168158,0.00071874453,0.0023821546,0.0004406218,0.0005764408,0.0009290989,0.0014640968,0.005742292],"category_scores_gemma":[0.000608215,0.0007601992,0.00088504265,0.00047443848,0.0016113597,0.00043299,0.0009263063,0.002457674,0.0013719113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077857357,0.000114000264,0.00032613764,0.000036357913,0.00001485624,0.0005375768,0.000020007466,0.000078796795,0.9974776,0.00016535641,0.00008476006,0.0003659338],"study_design_scores_gemma":[0.0008392058,0.001654698,0.0466905,0.00010631764,0.0001961809,0.010242122,0.00029770067,0.0037940224,0.9313819,0.0007183127,0.003980774,0.000098446435],"about_ca_topic_score_codex":0.00090356305,"about_ca_topic_score_gemma":0.0010278691,"teacher_disagreement_score":0.005742292,"about_ca_system_score_codex":0.00068465073,"about_ca_system_score_gemma":0.00038751788,"threshold_uncertainty_score":0.019209862},"labels":[],"label_agreement":null},{"id":"W2329233355","doi":"10.1016/j.jneuroim.2016.03.019","title":"TLR4 induces CCR7-dependent monocytes transmigration through the blood–brain barrier","year":2016,"lang":"en","type":"article","venue":"Journal of Neuroimmunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"CCL19; Monocyte; TLR4; Biology; Chemotaxis; Peptidoglycan; Toll-like receptor; Cell biology; Lipoteichoic acid; C-C chemokine receptor type 7; Receptor; Microbiology; Innate immune system; Immunology; Chemokine; Bacteria; Chemokine receptor; Immune system; Signal transduction; Staphylococcus aureus; Biochemistry; Genetics","score_opus":0.01680727230091822,"score_gpt":0.24359655922148535,"score_spread":0.22678928692056713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2329233355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895266,0.0033552514,0.0031002013,0.0007129878,0.0001666365,0.000061679566,0.0003550653,0.00011694482,0.0026046317],"genre_scores_gemma":[0.9891422,0.0016194738,0.002387846,0.00027337897,0.000069171154,0.000096877695,0.0006943794,0.000022852138,0.0056938324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994784,0.00013354894,0.000030556817,0.000046012465,0.00007092284,0.0002406241],"domain_scores_gemma":[0.9998447,0.000019697382,0.000028244544,0.00002103152,0.00003750071,0.00004883008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028167423,0.0004667117,0.000361558,0.0004464485,0.00032889016,0.00051613036,0.00036091625,0.00056914764,0.0035103073],"category_scores_gemma":[0.00025632075,0.00024133908,0.00066490436,0.00013680683,0.00030072356,0.00041724497,0.0004627562,0.0015135162,0.0012185762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015481722,0.00018091216,0.00026476645,0.00016330233,0.000031955802,0.0001810392,0.00004570426,0.00008904736,0.99217963,0.0003867814,0.000651272,0.0042775115],"study_design_scores_gemma":[0.00019954387,0.001246109,0.0077675423,0.000051127263,0.00007905359,0.0005152455,0.0002931964,0.0018356068,0.9837949,0.00038585687,0.0038154358,0.000016377933],"about_ca_topic_score_codex":0.001499475,"about_ca_topic_score_gemma":0.0023814733,"teacher_disagreement_score":0.0035103073,"about_ca_system_score_codex":0.00063028274,"about_ca_system_score_gemma":0.0008482917,"threshold_uncertainty_score":0.011743128},"labels":[],"label_agreement":null},{"id":"W2330566068","doi":"10.1097/ta.0b013e3182789489","title":"Lipopolysaccharide and hemorrhagic shock cause systemic inflammation by different mechanisms","year":2012,"lang":"en","type":"article","venue":"The Journal of Trauma: Injury, Infection, and Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Sept Iles","funders":"","keywords":"Systemic inflammation; Inflammation; Lipopolysaccharide; Shock (circulatory); Hemorrhagic shock; Medicine; Immunology; Internal medicine","score_opus":0.009957683858349367,"score_gpt":0.2581617700898263,"score_spread":0.24820408623147697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2330566068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9686054,0.02461897,0.0031958944,0.0004798745,0.00030581278,0.00014432891,0.0001905207,0.00004901336,0.0024102412],"genre_scores_gemma":[0.9855129,0.010655111,0.0019435892,0.00036241766,0.00022883284,0.00019940168,0.00032020695,0.0000064334445,0.00077110244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945074,0.00018848313,0.000060834132,0.000059991602,0.00012374095,0.000116081006],"domain_scores_gemma":[0.999468,0.000082152445,0.00020208182,0.000042947486,0.000054014203,0.00015079444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055204384,0.00069453014,0.00050515315,0.000332293,0.00013569393,0.00043328994,0.0002328173,0.0005613468,0.0016851593],"category_scores_gemma":[0.00032666026,0.00015237118,0.0005492527,0.0001857156,0.00067368057,0.00040488155,0.00054066157,0.0008022743,0.00028377268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006228414,0.00092153193,0.006258065,0.0010613021,0.0001504787,0.00093669497,0.00015071167,0.00020851553,0.9650351,0.0011131841,0.00023809451,0.01769792],"study_design_scores_gemma":[0.0017988025,0.044559266,0.24830714,0.00060658547,0.00089890306,0.008500379,0.0013678253,0.0028079138,0.6712283,0.004915437,0.014885172,0.00012426097],"about_ca_topic_score_codex":0.00006325863,"about_ca_topic_score_gemma":0.000067314235,"teacher_disagreement_score":0.0016851593,"about_ca_system_score_codex":0.00018959715,"about_ca_system_score_gemma":0.00022841888,"threshold_uncertainty_score":0.005637467},"labels":[],"label_agreement":null},{"id":"W2331376230","doi":"10.1097/shk.0b013e3181eecb7c","title":"WHAT'S NEW IN SHOCK, OCTOBER 2010?","year":2010,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Shock (circulatory); Medicine; Internal medicine","score_opus":0.00943794962697191,"score_gpt":0.2394380942981235,"score_spread":0.23000014467115157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2331376230","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00061883667,0.24843727,0.00061660283,0.07906022,0.6340612,0.00005071545,0.0005152371,0.00031963512,0.03632029],"genre_scores_gemma":[0.0032656456,0.2746727,0.0009322172,0.089458734,0.5057982,0.000082633196,0.0012644532,0.00015263108,0.124372765],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99922454,0.000118712895,0.00009365401,0.00010226355,0.00036782888,0.00009296419],"domain_scores_gemma":[0.99761164,0.00037782942,0.00018934858,0.00006642901,0.0009884967,0.00076628214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000930056,0.0014203982,0.0014212277,0.0019624617,0.00089091744,0.004369811,0.0013475701,0.003348367,0.05609987],"category_scores_gemma":[0.0038531264,0.00041877435,0.00095242535,0.0014095005,0.0007860617,0.003249075,0.0013638079,0.0047488264,0.032472596],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011886948,0.000048538717,0.00033040575,0.0007806114,0.00001564128,0.00012824938,0.00002033229,0.00007541247,0.0002630829,0.0005866376,0.8626334,0.13499884],"study_design_scores_gemma":[0.0000135675855,0.00004606646,0.00073826313,0.00068212865,0.000009409552,0.0002906532,0.00004991176,0.000043893662,0.00004197604,0.0003990826,0.9976744,0.000010664462],"about_ca_topic_score_codex":0.0014225311,"about_ca_topic_score_gemma":0.0038228978,"teacher_disagreement_score":0.05609987,"about_ca_system_score_codex":0.0014183377,"about_ca_system_score_gemma":0.0015235825,"threshold_uncertainty_score":0.18767273},"labels":[],"label_agreement":null},{"id":"W2331816454","doi":"10.1097/cji.0b013e31828eed62","title":"Identification of Synthetic Peptides that Inhibit Lipopolysaccharide (LPS) Binding to Myeloid Differentiation Protein-2 (MD-2)","year":2013,"lang":"en","type":"article","venue":"Journal of Immunotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Lipopolysaccharide; TLR4; Peptide; Peptide library; Tumor necrosis factor alpha; Phage display; Chemistry; Peptide sequence; Receptor; Molecular biology; Biology; Biochemistry; Immunology; Gene","score_opus":0.009315536270661534,"score_gpt":0.22712660890450412,"score_spread":0.21781107263384258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2331816454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9887694,0.002711886,0.0069045657,0.00009066571,0.000033075936,0.00013259528,0.00038178207,0.00004347277,0.0009324186],"genre_scores_gemma":[0.9713316,0.002786794,0.021734862,0.00021892965,0.00004047521,0.00018896075,0.0018839765,0.00002769023,0.001786678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988043,0.000018298091,0.000010460498,0.000022611295,0.000041305007,0.000026782882],"domain_scores_gemma":[0.9998791,0.000027805912,0.00003465158,0.0000066409893,0.000018043267,0.000033769626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015442653,0.00053848943,0.00046892444,0.00025946184,0.00014762675,0.0002686649,0.00023744344,0.00031416977,0.00085863756],"category_scores_gemma":[0.00019046306,0.0001596211,0.00032435142,0.0002266804,0.0001415796,0.00017545088,0.00021367942,0.00050567125,0.000357384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000840275,0.000047780228,0.00011825799,0.000034599623,0.000004208858,0.00004743196,0.0000044021676,0.000089593996,0.99819225,0.000018757153,0.000016737427,0.0013420888],"study_design_scores_gemma":[0.000057908255,0.0017762445,0.0049846354,0.000013326116,0.000039719678,0.0011945032,0.000024939616,0.0014399868,0.9873976,0.000051267823,0.003007529,0.0000123257105],"about_ca_topic_score_codex":0.00011007383,"about_ca_topic_score_gemma":0.00022240236,"teacher_disagreement_score":0.00085863756,"about_ca_system_score_codex":0.00017117072,"about_ca_system_score_gemma":0.00017145216,"threshold_uncertainty_score":0.0028724074},"labels":[],"label_agreement":null},{"id":"W2333785992","doi":"10.3899/jrheum.100732","title":"Expression of Toll-like Receptors and Their Signaling Pathways in Rheumatoid Synovitis","year":2011,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Sigrid Juséliuksen Säätiö","keywords":"Dendritic cell; Toll-like receptor; Medicine; Myeloid; Receptor; Immunology; Molecular biology; Biology; Immune system; Innate immune system; Internal medicine","score_opus":0.01628747560585269,"score_gpt":0.2044280239834356,"score_spread":0.1881405483775829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2333785992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90699786,0.089461245,0.001187194,0.00018701477,0.000039484337,0.000034140616,0.0001873518,0.000027554363,0.0018782195],"genre_scores_gemma":[0.98584706,0.011274843,0.001480357,0.00009267916,0.000040513398,0.000050020833,0.00019218553,0.000003275899,0.0010190771],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978894,0.00005559623,0.000030026316,0.000032785174,0.00005348381,0.000039191327],"domain_scores_gemma":[0.99991655,0.000009955371,0.000037151945,0.0000030842768,0.000016043765,0.000017067476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038215236,0.00030116484,0.00017175535,0.00064644293,0.00018700298,0.00032170417,0.00014969388,0.0003819586,0.00094777165],"category_scores_gemma":[0.0002021807,0.00015836114,0.00018384593,0.00032777298,0.0002263383,0.00030869045,0.00020586936,0.00026851022,0.00028902994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021560935,0.00010891366,0.024645383,0.0013120886,0.000059003876,0.001823344,0.00025291447,0.00018640475,0.9366927,0.00041686816,0.00029558068,0.03205072],"study_design_scores_gemma":[0.00046414582,0.0038232428,0.71279687,0.0009309451,0.0005327234,0.027578706,0.0023126318,0.003139249,0.22219403,0.0020032492,0.024131259,0.00009295301],"about_ca_topic_score_codex":0.00029745608,"about_ca_topic_score_gemma":0.0003320758,"teacher_disagreement_score":0.00094777165,"about_ca_system_score_codex":0.00023707043,"about_ca_system_score_gemma":0.00015437398,"threshold_uncertainty_score":0.0031706095},"labels":[],"label_agreement":null},{"id":"W2334599302","doi":"10.1097/ta.0b013e3182ab0723","title":"Interleukin 1β attenuates vascular α1 adrenergic receptors expression following lipopolysaccharide-induced endotoxemia in rabbits","year":2014,"lang":"en","type":"article","venue":"The Journal of Trauma: Injury, Infection, and Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Sept Iles","funders":"","keywords":"Phenylephrine; Lipopolysaccharide; Receptor; Nitric oxide; Mesenteric arteries; STAT protein; Agonist; Vascular smooth muscle; Internal medicine; Endocrinology; Messenger RNA; Signal transduction; Chemistry; STAT3; Biology; Cell biology; Medicine; Biochemistry; Artery; Blood pressure","score_opus":0.009798771958574766,"score_gpt":0.26583660890870237,"score_spread":0.2560378369501276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2334599302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952247,0.0021505246,0.001507614,0.00020102593,0.000083477426,0.000051483566,0.00009545521,0.000056388657,0.00062921125],"genre_scores_gemma":[0.9921875,0.0029157698,0.0015580653,0.00020437261,0.00007628548,0.00015036976,0.00034096767,0.000018472536,0.0025482133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999782,0.000032954784,0.000028989258,0.00004037319,0.000049426846,0.00006621496],"domain_scores_gemma":[0.9996321,0.00003228139,0.00018291707,0.000037846126,0.0000372923,0.000077473385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040634527,0.00058315095,0.00050123065,0.00041428313,0.00018112375,0.00033201466,0.0001869183,0.0003582549,0.00097309495],"category_scores_gemma":[0.00040521016,0.0002705978,0.00037544197,0.00016906751,0.00045914546,0.00031607327,0.00018986562,0.001043381,0.00036881707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021431907,0.00039835443,0.0010103538,0.00010110695,0.000015060473,0.00020299632,0.00012524168,0.000052875428,0.99299663,0.0000984201,0.0000621789,0.0027935605],"study_design_scores_gemma":[0.0005797525,0.015365255,0.028216308,0.00007045911,0.00016388517,0.0009865145,0.00033778985,0.0011983848,0.94920963,0.00023080985,0.0036126089,0.00002856934],"about_ca_topic_score_codex":0.00023611961,"about_ca_topic_score_gemma":0.0003181897,"teacher_disagreement_score":0.00097309495,"about_ca_system_score_codex":0.00023352585,"about_ca_system_score_gemma":0.00024711975,"threshold_uncertainty_score":0.0032553673},"labels":[],"label_agreement":null},{"id":"W2339474990","doi":"10.1080/21645515.2016.1168958","title":"Phosphate substitution in an AlOOH - TLR4 adjuvant system (SPA08) modulates the immunogenicity of Serovar E MOMP from <i>Chlamydia trachomatis</i>","year":2016,"lang":"en","type":"article","venue":"Human Vaccines & Immunotherapeutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Immunogenicity; Adjuvant; Chemistry; Microbiology; Chlamydia trachomatis; Phosphate; Splenocyte; Antigen; Biology; In vitro; Biochemistry; Virology; Immunology","score_opus":0.01702090506364479,"score_gpt":0.2458775999836089,"score_spread":0.2288566949199641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339474990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989981,0.00040415296,0.00033029538,0.000019626106,0.000010597339,0.000011154393,0.00003287667,0.000008048718,0.00018507196],"genre_scores_gemma":[0.99777645,0.00045823358,0.0011064057,0.000041761432,0.0000083345185,0.000017705092,0.00010137296,0.000004373758,0.00048539997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992085,0.000018650171,0.00000874281,0.000012229589,0.00001830721,0.000021198268],"domain_scores_gemma":[0.999918,0.000015343714,0.000034575944,0.0000045745637,0.000009577452,0.000017940141],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011967878,0.00024279217,0.00015050167,0.00009658602,0.000067123154,0.0001192509,0.00015654872,0.00019673617,0.0007060102],"category_scores_gemma":[0.00013026725,0.00008917986,0.00014943234,0.00006580111,0.00012915544,0.00016224588,0.00012887974,0.00029976747,0.000108505716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024204823,0.000055709705,0.00011420929,0.000030834315,0.0000037316163,0.00001134962,0.000003987102,0.000039963852,0.9989035,0.0000108857585,0.0000070481274,0.000576687],"study_design_scores_gemma":[0.000023197686,0.002230147,0.001359657,0.0000048040165,0.000016419264,0.000056845154,0.000008496985,0.0002762324,0.9955348,0.0000116801575,0.00047515024,0.000002729952],"about_ca_topic_score_codex":0.00022407086,"about_ca_topic_score_gemma":0.00029915734,"teacher_disagreement_score":0.0007060102,"about_ca_system_score_codex":0.00009745689,"about_ca_system_score_gemma":0.00013309384,"threshold_uncertainty_score":0.002361834},"labels":[],"label_agreement":null},{"id":"W2339897553","doi":"10.1189/jlb.69.5.815","title":"Peroxynitrite mediates cytokine-induced IL-8 gene expression and production by human leukocytes","year":2001,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Medical Research Council Canada","keywords":"Pyrrolidine dithiocarbamate; Peroxynitrite; Nitric oxide; Biology; Cytokine; Superoxide; Molecular biology; Tumor necrosis factor alpha; Peripheral blood mononuclear cell; Nitric oxide synthase; Gene expression; Interleukin; Immunology; Inflammation; Biochemistry; NF-κB; In vitro; Endocrinology; Enzyme; Gene","score_opus":0.016908154295143515,"score_gpt":0.26310878453938513,"score_spread":0.2462006302442416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339897553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852116,0.00971972,0.0029902363,0.00017005207,0.000041774678,0.000070061105,0.00015046552,0.000042440508,0.0016034442],"genre_scores_gemma":[0.99220467,0.0034503727,0.0017596162,0.000105641775,0.00005586289,0.000097927485,0.0003220407,0.000007629331,0.0019963104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984896,0.00005292224,0.000008911571,0.000022396895,0.000031245574,0.000035583922],"domain_scores_gemma":[0.9999218,0.00002051208,0.000026433803,0.0000053925955,0.000009980947,0.000015778596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016472473,0.00032632315,0.00019424224,0.00011835109,0.00009911897,0.00024134942,0.000103162805,0.000193697,0.0014977398],"category_scores_gemma":[0.000250482,0.00009385493,0.000118050826,0.00006079843,0.00013002599,0.00015674469,0.00017684206,0.00024485277,0.00046127135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049853383,0.000051883948,0.0009051423,0.00010819868,0.000005890943,0.00017802253,0.000113573486,0.000030911317,0.99349135,0.000075168784,0.00008692358,0.0044543534],"study_design_scores_gemma":[0.00016019908,0.0028185938,0.035213616,0.00006558988,0.000050757066,0.0014235823,0.00032934273,0.0013033245,0.94444406,0.0004239169,0.013757556,0.000009430708],"about_ca_topic_score_codex":0.00022392711,"about_ca_topic_score_gemma":0.00021758529,"teacher_disagreement_score":0.0014977398,"about_ca_system_score_codex":0.00013424376,"about_ca_system_score_gemma":0.000116606694,"threshold_uncertainty_score":0.0050104856},"labels":[],"label_agreement":null},{"id":"W2342083333","doi":"10.1089/vim.2015.0144","title":"Characterization of Immune Responses to an Inactivated Avian Influenza Virus Vaccine Adjuvanted with Nanoparticles Containing CpG ODN","year":2016,"lang":"en","type":"article","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Poultry Research Council","keywords":"Adjuvant; CpG Oligodeoxynucleotide; Immune system; Nasal administration; Virus; Antigen; PLGA; Antibody; Virology; Inactivated vaccine; Microbiology; Biology; Chemistry; Immunology; Biochemistry","score_opus":0.012560227154072741,"score_gpt":0.24803914938313246,"score_spread":0.23547892222905972,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2342083333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981219,0.0003208549,0.0011286098,0.000011881639,0.000010832912,0.000023508173,0.00005923542,0.0000076268134,0.00031559865],"genre_scores_gemma":[0.99598503,0.00032234754,0.0021014067,0.000053735042,0.0000066845673,0.000046050158,0.00033017906,0.000008323141,0.001146389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999913,0.000014710225,0.0000078726,0.000022161546,0.000022995251,0.000019271516],"domain_scores_gemma":[0.9998554,0.000046522247,0.000023591687,0.000009500457,0.00004342645,0.000021542905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018622098,0.00032424106,0.00018036355,0.00016406715,0.00006267451,0.00013028726,0.00010972307,0.00029929628,0.00033738272],"category_scores_gemma":[0.00020068187,0.00010354322,0.00022877657,0.0000618066,0.0001286748,0.0001383497,0.00007860172,0.00025055915,0.00013670941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046594596,0.000011556952,0.00015035585,0.000014412846,0.0000018173289,0.000008204286,0.0000062170284,0.000045405417,0.99939156,0.0000042627785,0.0000028291429,0.0003168683],"study_design_scores_gemma":[0.000014544185,0.0018558239,0.009863983,0.0000072784173,0.000026594214,0.000105864754,0.000031867832,0.0015856469,0.9858737,0.000016707034,0.00061334716,0.00000466216],"about_ca_topic_score_codex":0.0005963384,"about_ca_topic_score_gemma":0.0005148423,"teacher_disagreement_score":0.0005963384,"about_ca_system_score_codex":0.0001382595,"about_ca_system_score_gemma":0.00010424692,"threshold_uncertainty_score":0.0011857748},"labels":[],"label_agreement":null},{"id":"W2342389707","doi":"10.1016/j.tice.2016.04.002","title":"Effects of Toll-like receptor ligands on RAW 264.7 macrophage morphology and zymosan phagocytosis","year":2016,"lang":"en","type":"article","venue":"Tissue and Cell","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Douglas College","funders":"","keywords":"Zymosan; Phagocytosis; Scavenger receptor; Toll-like receptor; TLR2; Mannose receptor; TLR5; Receptor; Chemistry; Cell biology; Lipoteichoic acid; Microbiology; TLR4; Biology; Macrophage; Biochemistry; Innate immune system; In vitro; Bacteria","score_opus":0.003554094982423717,"score_gpt":0.20017163457184464,"score_spread":0.19661753958942094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2342389707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99501896,0.0010041186,0.0006302028,0.00020363975,0.00007425494,0.000030866657,0.00042446054,0.000030813488,0.0025827242],"genre_scores_gemma":[0.9938881,0.0006415655,0.0009557994,0.00017321832,0.00003452578,0.00005301099,0.0005325586,0.000017574645,0.0037037118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992861,0.00026206556,0.000056514928,0.000051955216,0.000099303485,0.00024402098],"domain_scores_gemma":[0.9995303,0.00018894629,0.00005847235,0.00005183457,0.000078151585,0.00009228199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006541063,0.0004961251,0.00049570436,0.00031134993,0.00038156426,0.00057133037,0.00031063272,0.0007601351,0.0021553903],"category_scores_gemma":[0.000462232,0.0004039141,0.00046146332,0.00028373292,0.00064707815,0.0004120264,0.00024093305,0.00096788415,0.0007074289],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005421372,0.00028424518,0.00037461784,0.000071772345,0.000010292062,0.00020663685,0.000110002184,0.00008595154,0.9917024,0.0001400796,0.00010112058,0.00149156],"study_design_scores_gemma":[0.00024519739,0.003427197,0.022835232,0.000018560322,0.000029349068,0.00034084078,0.00031228352,0.0009055971,0.9704699,0.00013349495,0.0012578282,0.000024628984],"about_ca_topic_score_codex":0.0012548299,"about_ca_topic_score_gemma":0.0018926394,"teacher_disagreement_score":0.0021553903,"about_ca_system_score_codex":0.00047001973,"about_ca_system_score_gemma":0.0006635421,"threshold_uncertainty_score":0.007210493},"labels":[],"label_agreement":null},{"id":"W2343573218","doi":"10.1016/j.vetimm.2016.04.011","title":"Longitudinal evaluation of leukocyte transcripts in killer whales (Orcinus Orca)","year":2016,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Curtin University of Technology; AGE-WELL","keywords":"Biology; Zoology; Whale; Evolutionary biology; Fishery","score_opus":0.04239609152991191,"score_gpt":0.2806635652586454,"score_spread":0.23826747372873347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343573218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992137,0.000074828065,0.00013692347,0.000011999433,0.0000036638212,0.000008906121,0.00024110194,0.000004130304,0.00030475322],"genre_scores_gemma":[0.9971726,0.00009603331,0.00021702121,0.000042260803,0.000007481903,0.000053343494,0.0006109846,0.0000048671372,0.0017953169],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989533,0.000009870992,0.0000043111536,0.00004374121,0.000015977952,0.00003073877],"domain_scores_gemma":[0.9996482,0.00003674555,0.000104646584,0.000019909507,0.00009916019,0.00009130554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014673248,0.00019761341,0.00018091024,0.00075685035,0.0004702178,0.00038314197,0.00020249594,0.0003564821,0.0011470376],"category_scores_gemma":[0.00035423588,0.00015147895,0.00012801721,0.00035415907,0.0003377847,0.00030579173,0.0003581434,0.00037519404,0.00036305026],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011436703,0.00017653877,0.544543,0.00005082116,0.00004703664,0.00048533213,0.0012518116,0.000060168808,0.44541728,0.00008413215,0.00021003441,0.0065300856],"study_design_scores_gemma":[0.000003917616,0.00040301238,0.9916044,0.000005149418,0.000027579954,0.00021312105,0.000934632,0.000073761694,0.006144669,0.0000278217,0.00055604515,0.000005870028],"about_ca_topic_score_codex":0.003215761,"about_ca_topic_score_gemma":0.006491636,"teacher_disagreement_score":0.003215761,"about_ca_system_score_codex":0.00019304872,"about_ca_system_score_gemma":0.00019286676,"threshold_uncertainty_score":0.0063940883},"labels":[],"label_agreement":null},{"id":"W2343918956","doi":"10.1016/j.vetimm.2015.09.007","title":"Toll-like receptor 10 expression in chicken, cattle, pig, dog, and rat lungs","year":2015,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; University of Saskatchewan","keywords":"Biology; Innate immune system; Receptor; Lipopolysaccharide; Immunity; Toll-like receptor; Immune system; Immunology; Cell biology; Biochemistry","score_opus":0.01801541490574818,"score_gpt":0.2533679917639565,"score_spread":0.23535257685820835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343918956","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981456,0.00056650426,0.00022354421,0.0000256899,0.000010191048,0.000004096488,0.0001550572,0.00000808421,0.0008612687],"genre_scores_gemma":[0.9947292,0.00045134305,0.00035045345,0.000029513589,0.000007915963,0.000012099941,0.00034185988,0.0000048333595,0.0040728115],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99988675,0.000014761399,0.0000068903923,0.000029979465,0.000014809383,0.00004674746],"domain_scores_gemma":[0.99983335,0.000040421226,0.000033102,0.0000127759495,0.000029448827,0.000050798844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017944616,0.00019699747,0.00016600253,0.0005513892,0.0001770403,0.00036586737,0.0001563345,0.00032621148,0.0018694479],"category_scores_gemma":[0.00016671857,0.00025685233,0.00019655356,0.00014516755,0.0003091493,0.00031193584,0.00015545377,0.00038016296,0.00035949016],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015528968,0.00005488331,0.0106329555,0.0000830632,0.000018203948,0.00044499617,0.00016869223,0.00008761617,0.9836083,0.00028710268,0.00011402559,0.0029473102],"study_design_scores_gemma":[0.000074488846,0.0021925562,0.5503559,0.000052313622,0.00013973122,0.0035823232,0.0019658278,0.0019849963,0.43563294,0.00026736656,0.0037238332,0.000027839571],"about_ca_topic_score_codex":0.0014310988,"about_ca_topic_score_gemma":0.0019205166,"teacher_disagreement_score":0.0018694479,"about_ca_system_score_codex":0.00026909943,"about_ca_system_score_gemma":0.0001934661,"threshold_uncertainty_score":0.006253898},"labels":[],"label_agreement":null},{"id":"W2343996994","doi":"10.1038/srep25298","title":"Bufexamac ameliorates LPS-induced acute lung injury in mice by targeting LTA4H","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Peking University; China Postdoctoral Science Foundation; Queen's University; National Natural Science Foundation of China; Louisiana State University","keywords":"Leukotriene B4; Bronchoalveolar lavage; Chemistry; Lipopolysaccharide; Pharmacology; Inflammation; Leukotriene; Mechanism of action; Lung; Immunology; Medicine; Biochemistry; Asthma; Internal medicine; In vitro","score_opus":0.006231211969742365,"score_gpt":0.24159109865202286,"score_spread":0.2353598866822805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343996994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884427,0.005363969,0.0031416742,0.0006266939,0.00011897427,0.00009864574,0.00036548666,0.00027193772,0.0015698697],"genre_scores_gemma":[0.9905764,0.0030056979,0.0025828972,0.00018248767,0.00005012122,0.000094565075,0.00037954724,0.000018585324,0.003109767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999043,0.000022999438,0.000009685004,0.000011123117,0.00002095677,0.000030930092],"domain_scores_gemma":[0.999936,0.0000045943953,0.000024263843,0.0000054263596,0.000008834216,0.000020838334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001582994,0.0005040517,0.00038425822,0.0003528427,0.00016889206,0.00020997817,0.00031599615,0.00042346815,0.0014374008],"category_scores_gemma":[0.00009576284,0.000113476286,0.00022516609,0.00011797194,0.00025599424,0.00032011356,0.00012957177,0.0009286715,0.00021777624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015240035,0.0006426647,0.00021144046,0.00017983848,0.000016304772,0.00009195874,0.000023353257,0.0001802193,0.98725116,0.00018619685,0.00025439973,0.009438445],"study_design_scores_gemma":[0.00032507553,0.0060750153,0.0040980335,0.0000326077,0.000054381555,0.00023472129,0.000042372434,0.0015594179,0.9809232,0.00014403035,0.006500224,0.000010968453],"about_ca_topic_score_codex":0.00050757127,"about_ca_topic_score_gemma":0.00065801194,"teacher_disagreement_score":0.0014374008,"about_ca_system_score_codex":0.00018574837,"about_ca_system_score_gemma":0.00025076277,"threshold_uncertainty_score":0.004808545},"labels":[],"label_agreement":null},{"id":"W2344278630","doi":"10.1093/jn/132.6.1655s","title":"Assessing Age-Related Changes in Peripheral Blood Leukocyte Phenotypes in Labrador Retriever Dogs Using Flow Cytometry","year":2002,"lang":"en","type":"article","venue":"Journal of Nutrition","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Labrador Retriever; Flow cytometry; Peripheral; Phenotype; Peripheral blood; Medicine; Pathology; Immunology; Biology; Internal medicine; Genetics","score_opus":0.02614030665010453,"score_gpt":0.2638138440684017,"score_spread":0.23767353741829716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2344278630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859065,0.00035185297,0.00045948368,0.00001981563,0.000008025748,0.00002054738,0.0002460796,0.000015695723,0.00028785018],"genre_scores_gemma":[0.99654204,0.00043538242,0.00085685786,0.00006804436,0.000013051529,0.000068506415,0.0006950567,0.000012272019,0.0013086478],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99978787,0.000029589764,0.000020389316,0.00007352782,0.00004265504,0.0000460261],"domain_scores_gemma":[0.99964833,0.000055526318,0.00015034,0.000030679166,0.00006317431,0.000051886094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004209952,0.00026246594,0.00038145133,0.00077663996,0.00018705899,0.0003251812,0.0001760139,0.000483918,0.0006927985],"category_scores_gemma":[0.00054640486,0.00017469334,0.00019263354,0.0003390546,0.00024198953,0.00043956022,0.00013082955,0.00046443674,0.00022705593],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039071934,0.0003758708,0.12518717,0.00007711551,0.00007145731,0.00038385828,0.0004188192,0.00015657683,0.8606765,0.00007901927,0.0002856284,0.008380767],"study_design_scores_gemma":[0.00003932438,0.0028065073,0.8855247,0.000012067016,0.0001332428,0.001124524,0.0002929926,0.00077818433,0.1077737,0.000068993795,0.0014219207,0.000023794051],"about_ca_topic_score_codex":0.0012205981,"about_ca_topic_score_gemma":0.0019667933,"teacher_disagreement_score":0.0012205981,"about_ca_system_score_codex":0.0002806096,"about_ca_system_score_gemma":0.00009257619,"threshold_uncertainty_score":0.002426982},"labels":[],"label_agreement":null},{"id":"W2344633273","doi":"10.4049/jimmunol.186.supp.102.22","title":"Activation of TLR4 on endothelium alone initiates neutrophil adhesion within the liver microcirulation during endotoxemia (102.22)","year":2011,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Intravital microscopy; Endothelium; TLR4; Biology; Immunology; Neutrophil extracellular traps; Inflammation; Endothelial stem cell; Cell biology; Pathology; Medicine; In vivo; Endocrinology; In vitro; Biochemistry","score_opus":0.019793761014791855,"score_gpt":0.21602199424613447,"score_spread":0.1962282332313426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2344633273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960318,0.0004433969,0.0023471839,0.000063219915,0.000019582636,0.000017069564,0.00016746251,0.000045271463,0.0008650014],"genre_scores_gemma":[0.99411786,0.0003217214,0.0025453938,0.000067755835,0.000013037797,0.000048675614,0.00034151378,0.000012816681,0.0025313676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976736,0.000053073993,0.000020544107,0.000040021758,0.000044027125,0.000075122865],"domain_scores_gemma":[0.99986553,0.000016084477,0.000047964593,0.000020473793,0.000013688341,0.000036225123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020848296,0.0003274388,0.00022121867,0.00018935777,0.00012493134,0.0003119516,0.00013839298,0.00037624422,0.0020166642],"category_scores_gemma":[0.00017141899,0.0001633463,0.0002539653,0.00009127588,0.00020463427,0.00024295288,0.0002953097,0.00069530663,0.0005392897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014099924,0.000015041079,0.00015705424,0.000014605283,0.0000018219669,0.00004364118,0.0000068425647,0.000011756252,0.9991844,0.000046700457,0.000015677537,0.00036136532],"study_design_scores_gemma":[0.000019998386,0.00041836008,0.007282464,0.0000070743295,0.000014703757,0.00029586055,0.000040718813,0.0009640173,0.98996615,0.000052756455,0.0009346558,0.0000032711416],"about_ca_topic_score_codex":0.00026186756,"about_ca_topic_score_gemma":0.00030330085,"teacher_disagreement_score":0.0020166642,"about_ca_system_score_codex":0.00025531612,"about_ca_system_score_gemma":0.00013077391,"threshold_uncertainty_score":0.0067464113},"labels":[],"label_agreement":null},{"id":"W2345333765","doi":"10.3390/vaccines4020014","title":"Effects of KLK Peptide on Adjuvanticity of Different ODN Sequences","year":2016,"lang":"en","type":"article","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pfizer (Canada)","funders":"","keywords":"CpG Oligodeoxynucleotide; TLR9; Adjuvant; TLR7; Nuclease; Endosome; Chemistry; CpG site; Antigen; Biology; Cell biology; Receptor; Molecular biology; Innate immune system; Biochemistry; Toll-like receptor; Immunology; DNA; Gene","score_opus":0.006588299633851692,"score_gpt":0.2186837181852074,"score_spread":0.21209541855135572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2345333765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9980415,0.00088951905,0.0002903387,0.00002513287,0.000028064735,0.000026542384,0.00012544522,0.000011977015,0.00056143204],"genre_scores_gemma":[0.99734145,0.00073494355,0.0009952552,0.000051800434,0.00002070355,0.000025247464,0.00018729562,0.000010859099,0.00063250866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976784,0.000057956328,0.0000306561,0.00003197205,0.00004686353,0.00006475306],"domain_scores_gemma":[0.9995782,0.00017668866,0.00007768095,0.000019535459,0.00004863398,0.00009933289],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037502346,0.00059675943,0.00026063036,0.00018771023,0.00007176371,0.00020243302,0.0001511882,0.00025941932,0.0009192734],"category_scores_gemma":[0.00040943237,0.000120168326,0.00017699912,0.00019663434,0.00020344384,0.00023964116,0.00016062085,0.0005008188,0.0001616213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010662542,0.00015951869,0.00015154695,0.000105883024,0.0000074930967,0.000027212256,0.000021633954,0.0002988689,0.9963624,0.00003167633,0.00001772244,0.0017498754],"study_design_scores_gemma":[0.000047490666,0.0032803002,0.0011233941,0.000011893134,0.000022198245,0.000034686647,0.000012185334,0.00043672023,0.9945103,0.000017961675,0.00049698364,0.0000057910174],"about_ca_topic_score_codex":0.0003662233,"about_ca_topic_score_gemma":0.00047529693,"teacher_disagreement_score":0.0009192734,"about_ca_system_score_codex":0.00013956153,"about_ca_system_score_gemma":0.00030908416,"threshold_uncertainty_score":0.0030753016},"labels":[],"label_agreement":null},{"id":"W2370988548","doi":"","title":"The induction of immune response in lymphoid tissues of different sites after intranasal immunization with shigella vaccines","year":2002,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"Immune system; Spleen; Immunology; Biology; Antigen; Lymphatic system; CD3; T cell; Splenocyte; Immunization; CD8","score_opus":0.007114076521880328,"score_gpt":0.20397377697179597,"score_spread":0.19685970044991563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2370988548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951149,0.0017534442,0.0008068455,0.00006723036,0.0000793305,0.00008591705,0.0003880896,0.000074722455,0.0016294748],"genre_scores_gemma":[0.9925208,0.0012229239,0.0010267809,0.00018803701,0.00004868444,0.00017674586,0.0006718319,0.000018473034,0.004125853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977094,0.000032216583,0.000016405607,0.000053237367,0.00003489308,0.00009226742],"domain_scores_gemma":[0.9998574,0.000019382525,0.000034701956,0.000012828452,0.00002029147,0.000055377623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020650515,0.0005392951,0.00037639344,0.0003414988,0.00016393188,0.00022212263,0.00013749734,0.0004775292,0.0019645893],"category_scores_gemma":[0.00013014644,0.00019686171,0.00044589394,0.00009772379,0.00023326858,0.00034788216,0.00020209861,0.001300678,0.00044500563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061946415,0.00012104386,0.0004612299,0.00011187149,0.0000061284472,0.00007277888,0.00003746611,0.000023459648,0.9974533,0.000018597426,0.000037360423,0.0010372603],"study_design_scores_gemma":[0.0001358905,0.008177641,0.053917143,0.00005413218,0.00010645549,0.0006302129,0.00028048916,0.00058355747,0.9336601,0.00009753294,0.0023407259,0.000016257783],"about_ca_topic_score_codex":0.00022061667,"about_ca_topic_score_gemma":0.0003939288,"teacher_disagreement_score":0.0019645893,"about_ca_system_score_codex":0.00016267823,"about_ca_system_score_gemma":0.0001251844,"threshold_uncertainty_score":0.0065722466},"labels":[],"label_agreement":null},{"id":"W2376947412","doi":"10.1371/journal.pone.0155030","title":"Lipopolysaccharide Is Cleared from the Circulation by Hepatocytes via the Low Density Lipoprotein Receptor","year":2016,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":143,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"LDL receptor; PCSK9; Lipopolysaccharide; Hepatocyte; Kexin; Receptor; Endocrinology; Internal medicine; Sepsis; Biology; Lipoprotein; Chemistry; Cholesterol; Medicine; Biochemistry; In vitro","score_opus":0.016989050482071114,"score_gpt":0.18930860215218817,"score_spread":0.17231955167011706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2376947412","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96965474,0.011576897,0.013411843,0.00087858475,0.0002292688,0.000055490305,0.0008458401,0.00055635255,0.0027910648],"genre_scores_gemma":[0.98767567,0.0035152598,0.0029523347,0.00018618153,0.000045695768,0.00006728004,0.0004003908,0.000049481052,0.0051076584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996544,0.00008082101,0.000032206008,0.00006438023,0.00010807664,0.000060124916],"domain_scores_gemma":[0.999739,0.000017753966,0.00012328266,0.000023443146,0.00004227246,0.000054323144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019538107,0.00035565792,0.00045458213,0.00023378739,0.00013298003,0.00053062534,0.0001479987,0.0002694635,0.0016514213],"category_scores_gemma":[0.00020992533,0.00018576838,0.00029794313,0.00012726165,0.0003085345,0.00024774988,0.00035199837,0.00066654064,0.0008483079],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010289398,0.000038867835,0.00084907695,0.00014654026,0.00001867289,0.00016187303,0.000022627362,0.000101620826,0.9919431,0.00025246365,0.00024378518,0.0051925397],"study_design_scores_gemma":[0.0001341152,0.0009945824,0.035527773,0.000036241243,0.000073639334,0.0009237583,0.00013673652,0.002668609,0.95082253,0.0004749752,0.008176978,0.000030114874],"about_ca_topic_score_codex":0.0003177865,"about_ca_topic_score_gemma":0.0002567975,"teacher_disagreement_score":0.0016514213,"about_ca_system_score_codex":0.00021791084,"about_ca_system_score_gemma":0.00024219426,"threshold_uncertainty_score":0.0055245757},"labels":[],"label_agreement":null},{"id":"W2377055049","doi":"","title":"Hepatic expressions of TLR4 and MD-2 genes in septic rats during the early phase and intervention with propofol","year":2011,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"TLR4; Messenger RNA; Lipopolysaccharide; Internal medicine; Propofol; Endocrinology; Medicine; Real-time polymerase chain reaction; Reverse transcription polymerase chain reaction; Chemistry; Receptor; Gene; Molecular biology; Biology; Anesthesia; Biochemistry","score_opus":0.011744519983199846,"score_gpt":0.2309893521037152,"score_spread":0.21924483212051538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2377055049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99771714,0.0007107371,0.0008842398,0.00005024717,0.000025272177,0.000032391807,0.00015505658,0.000020987527,0.00040402566],"genre_scores_gemma":[0.99538815,0.0009499032,0.0012031079,0.000082159495,0.00002846321,0.00017599668,0.00029393338,0.0000077670775,0.0018705329],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998368,0.000020104118,0.000014101145,0.000034118086,0.00003220193,0.00006271651],"domain_scores_gemma":[0.99971896,0.000017112896,0.000115385825,0.000015071446,0.000044812212,0.0000886584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020859687,0.00048085654,0.00050315115,0.00035945638,0.00022486188,0.00022446667,0.00010629479,0.00032124354,0.0013434516],"category_scores_gemma":[0.0002194705,0.00023711857,0.00035807682,0.00017661307,0.00047293896,0.00035262865,0.00021582058,0.00061809865,0.00022929104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011735534,0.00041636627,0.011458808,0.00023764878,0.00002745687,0.00041888375,0.00019471592,0.0001360301,0.9707035,0.00010441852,0.00009614569,0.004470514],"study_design_scores_gemma":[0.00050669373,0.023239462,0.28975055,0.00005855067,0.0002695736,0.0013481342,0.001598697,0.002195486,0.6780698,0.00037263668,0.002515348,0.00007508253],"about_ca_topic_score_codex":0.0002698332,"about_ca_topic_score_gemma":0.00039234874,"teacher_disagreement_score":0.0013434516,"about_ca_system_score_codex":0.00019183785,"about_ca_system_score_gemma":0.00029048524,"threshold_uncertainty_score":0.0044943094},"labels":[],"label_agreement":null},{"id":"W2379460184","doi":"","title":"The effects of granulocyte-colony stimulating factor on the expression of cytokines in systemic inflammatory response syndrome (SIRS)","year":2009,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"Systemic inflammatory response syndrome; Granulocyte colony-stimulating factor; Lipopolysaccharide; Immune system; Immunology; Medicine; Granulocyte; Lymphocyte; Internal medicine; Endocrinology; Sepsis","score_opus":0.0064695660189943915,"score_gpt":0.22363979958981073,"score_spread":0.21717023357081633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2379460184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987795,0.00939085,0.0009171399,0.00019731239,0.00008409602,0.000053703166,0.00014796913,0.00005505692,0.0013588879],"genre_scores_gemma":[0.9953048,0.0029470122,0.0008125644,0.00009677582,0.000039051396,0.00004837192,0.00016397392,0.000004275107,0.0005832498],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998605,0.00004248551,0.000010990301,0.000016112921,0.00003576288,0.00003413006],"domain_scores_gemma":[0.9999249,0.000012677191,0.00002209999,0.0000068671434,0.000009673314,0.00002389369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016223072,0.00049811054,0.0002269053,0.00020063117,0.00007866673,0.00011639607,0.00007395914,0.00021638801,0.0005651682],"category_scores_gemma":[0.00015516499,0.000054201173,0.00023731918,0.00007192278,0.0002895192,0.00009267901,0.00012978754,0.00044657176,0.00013931941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020664618,0.0003877257,0.0036092908,0.00043882398,0.000030994855,0.00051810994,0.000044173437,0.00015127606,0.9766765,0.00011041722,0.00024088833,0.015725432],"study_design_scores_gemma":[0.00045072415,0.012999972,0.09064339,0.00011730342,0.00024311208,0.0029933872,0.0001685714,0.0013020257,0.883276,0.0002478716,0.0075421478,0.000015430842],"about_ca_topic_score_codex":0.00014584964,"about_ca_topic_score_gemma":0.000203894,"teacher_disagreement_score":0.0005651682,"about_ca_system_score_codex":0.00010389918,"about_ca_system_score_gemma":0.00013664359,"threshold_uncertainty_score":0.0018906593},"labels":[],"label_agreement":null},{"id":"W2381833281","doi":"","title":"Preparation and properties of nepeta oil-oxymatrine lipidosome pro vagina thermosensitive gel","year":2014,"lang":"en","type":"article","venue":"Zhongcaoyao","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Science North","funders":"","keywords":"Nepeta; Chromatography; Chemistry; Emulsion; Essential oil; Organic chemistry","score_opus":0.009698810026594697,"score_gpt":0.2209999314544257,"score_spread":0.211301121427831,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2381833281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97170055,0.0064188554,0.01810933,0.0001816882,0.00005798288,0.00014305959,0.00041685216,0.000117223964,0.0028544273],"genre_scores_gemma":[0.978618,0.0031492864,0.0144894095,0.00012144185,0.00001850569,0.00015725817,0.00032963735,0.00004828965,0.0030681833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992454,0.0000079573065,0.000009181489,0.000020259014,0.000026617201,0.000011485489],"domain_scores_gemma":[0.99990666,0.00001324856,0.000038638715,0.0000073768883,0.000017618539,0.000016395024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015221522,0.0002925793,0.0001492085,0.00027214995,0.00011859036,0.00015564628,0.000092192546,0.00023119278,0.000661276],"category_scores_gemma":[0.0001687636,0.000106393454,0.0001931557,0.00010822568,0.00015365526,0.00029535167,0.00015310667,0.0002650915,0.00020571573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003672178,0.000009619326,0.00016013143,0.00008655471,0.0000036306367,0.00005893395,0.000022851968,0.00007601866,0.99668926,0.000052539654,0.000023742308,0.0027800144],"study_design_scores_gemma":[0.000009026924,0.00021420082,0.0016831866,0.000013673904,0.000019096644,0.0002479572,0.000018779847,0.00050599047,0.99498147,0.00002473737,0.002274651,0.0000072282705],"about_ca_topic_score_codex":0.00029786787,"about_ca_topic_score_gemma":0.0004979178,"teacher_disagreement_score":0.000661276,"about_ca_system_score_codex":0.000117655036,"about_ca_system_score_gemma":0.000118864795,"threshold_uncertainty_score":0.0022122264},"labels":[],"label_agreement":null},{"id":"W2396670243","doi":"10.1007/s00705-016-2904-x","title":"Activation of toll-like receptor signaling pathways leading to nitric oxide-mediated antiviral responses","year":2016,"lang":"en","type":"review","venue":"Archives of Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Agriculture and Agri-Food Canada; Ministry of Agriculture - Saskatchewan","keywords":"Biology; Innate immune system; Cell biology; Signal transduction; Receptor; Nitric oxide; Nitric oxide synthase; Cell signaling; Pattern recognition receptor; Pathogen-associated molecular pattern; Intracellular; Downregulation and upregulation; Toll-like receptor; Immune system; Immunology; Biochemistry; Gene","score_opus":0.029369445620841424,"score_gpt":0.2847099237761406,"score_spread":0.2553404781552992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396670243","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032545868,0.9972499,0.00035175626,0.0002332083,0.00033146812,0.0000058517003,0.000016307002,0.000010284716,0.0014758431],"genre_scores_gemma":[0.0028066258,0.99542737,0.00032717022,0.00014562797,0.0003649301,0.000008544132,0.00003959581,0.0000015054945,0.0008785473],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999853,0.000022348637,0.000021125916,0.000027174656,0.000053137344,0.000023216953],"domain_scores_gemma":[0.9998504,0.00004599282,0.00003719944,0.00000639717,0.000037624373,0.00002238245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046080616,0.0007983586,0.000789049,0.0010593423,0.00020247027,0.0010410665,0.00078198995,0.0008452112,0.002147088],"category_scores_gemma":[0.00035583918,0.00019188049,0.00032755057,0.00073665805,0.00050227565,0.0009327782,0.00061904016,0.0015579973,0.0015396005],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016860425,0.00008311622,0.00028535,0.0112137785,0.00006545916,0.00044525854,0.00006058152,0.00033107144,0.019414801,0.0056231045,0.014710708,0.94759816],"study_design_scores_gemma":[0.000031452804,0.00014814417,0.0017818166,0.0028377546,0.00010560625,0.0023557278,0.000094898845,0.00017373012,0.008171405,0.00449906,0.9797713,0.000029064355],"about_ca_topic_score_codex":0.00029697976,"about_ca_topic_score_gemma":0.0005023178,"teacher_disagreement_score":0.002147088,"about_ca_system_score_codex":0.00043616846,"about_ca_system_score_gemma":0.0007935461,"threshold_uncertainty_score":0.0071827173},"labels":[],"label_agreement":null},{"id":"W2396860094","doi":"10.4049/jimmunol.1502466","title":"A Novel Role for TL1A/DR3 in Protection against Intestinal Injury and Infection","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Medicine; Business","score_opus":0.011197272619163257,"score_gpt":0.23299066055188386,"score_spread":0.2217933879327206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396860094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97490406,0.012331117,0.008062714,0.00057923765,0.0000835289,0.000040443007,0.00052262656,0.00028534248,0.0031908834],"genre_scores_gemma":[0.9939423,0.001815008,0.0022378217,0.00023146106,0.000039172126,0.00002104046,0.0002595427,0.000020692973,0.001432826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999864,0.00002790439,0.000011558269,0.000032782187,0.00001985644,0.00004381374],"domain_scores_gemma":[0.9998424,0.000010008739,0.000066712426,0.00001775013,0.00001534311,0.000047691912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019876157,0.0004126185,0.00024678517,0.0001942363,0.0001625032,0.00045766984,0.00025404157,0.00038206967,0.0016705261],"category_scores_gemma":[0.00014945911,0.00010842008,0.0003041049,0.00012283085,0.00025274782,0.00029013984,0.00028249022,0.00065187865,0.0005490826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047278294,0.000023563274,0.001288064,0.0000834276,0.000012121724,0.00028738703,0.00002440396,0.00007093141,0.9921495,0.00047475175,0.000107499254,0.005005651],"study_design_scores_gemma":[0.00028196705,0.003217778,0.09078953,0.00012893385,0.00025328714,0.012597546,0.00032859825,0.0035976213,0.86115587,0.0019215844,0.025675872,0.00005140396],"about_ca_topic_score_codex":0.00017917943,"about_ca_topic_score_gemma":0.00025223216,"teacher_disagreement_score":0.0016705261,"about_ca_system_score_codex":0.00028187386,"about_ca_system_score_gemma":0.00020806552,"threshold_uncertainty_score":0.0055885315},"labels":[],"label_agreement":null},{"id":"W2399306507","doi":"10.1159/000445772","title":"Critical Role of Cx40 in Reduced Endothelial Electrical Coupling by Lipopolysaccharide and Hypoxia-Reoxygenation","year":2015,"lang":"en","type":"article","venue":"Journal of Vascular Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"Heart and Stroke Foundation of Canada","keywords":"Hypoxia (environmental); Lipopolysaccharide; Medicine; Cardiology; Chemistry; Internal medicine; Oxygen","score_opus":0.03305976934502907,"score_gpt":0.33607808038867076,"score_spread":0.3030183110436417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399306507","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99699867,0.0007104535,0.0016246391,0.0000998859,0.000016501737,0.000017424922,0.00011827507,0.000032920816,0.00038121137],"genre_scores_gemma":[0.9976417,0.0002620931,0.0014638364,0.000039161387,0.000008112024,0.00002502211,0.00014177397,0.000008101162,0.00041023717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998493,0.000036285837,0.000018742621,0.00002805279,0.000035998517,0.000031598887],"domain_scores_gemma":[0.99969554,0.000051179075,0.00011974969,0.00002313131,0.000030510684,0.0000798709],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026087178,0.00032435296,0.00017791639,0.00015632184,0.00012829878,0.00018503368,0.00020074043,0.00030753453,0.0013065588],"category_scores_gemma":[0.0002138229,0.00010550661,0.00020633,0.00007211969,0.00033686543,0.00020853146,0.00026552886,0.00045230356,0.00020144835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022177932,0.000019848922,0.00032182893,0.000035092155,0.000004627964,0.00016335788,0.000012142385,0.00003822606,0.9985765,0.00015250826,0.00002245581,0.00043166685],"study_design_scores_gemma":[0.000044417447,0.00045462235,0.017952051,0.000015598325,0.000033841578,0.0015149707,0.00003789412,0.0011797404,0.9775648,0.00024326789,0.00095336564,0.0000054967477],"about_ca_topic_score_codex":0.00017178353,"about_ca_topic_score_gemma":0.000110701396,"teacher_disagreement_score":0.0013065588,"about_ca_system_score_codex":0.00023018563,"about_ca_system_score_gemma":0.00018155584,"threshold_uncertainty_score":0.004370868},"labels":[],"label_agreement":null},{"id":"W2400307825","doi":"10.1038/srep19360","title":"The proprotein convertase PC1/3 regulates TLR9 trafficking and the associated signaling pathways","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Direction Générale de l’offre de Soins; Université Lille 1 - Sciences et Technologies; Institut National Du Cancer; Ministère de l'Education Nationale, de l'Enseignement Supérieur et de la Recherche; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Université de Lille","keywords":"TLR9; Endosome; Cell biology; TLR4; Signalling; Inflammation; Signal transduction; Chemistry; Biology; Immunology; Biochemistry; Intracellular; Gene","score_opus":0.008628992481445207,"score_gpt":0.19427466033359608,"score_spread":0.18564566785215086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400307825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98410946,0.008171619,0.0036029934,0.00035323534,0.000046577978,0.000050298193,0.0009445903,0.000120133685,0.0026010978],"genre_scores_gemma":[0.99194056,0.0031311323,0.0015650572,0.00009808318,0.000017030718,0.000037914713,0.0006566447,0.000019321886,0.0025342782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998355,0.000015789306,0.000009419956,0.000031081396,0.00004160503,0.0000666004],"domain_scores_gemma":[0.999892,0.000008009382,0.000039950555,0.0000067624164,0.000023201388,0.00003002065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009758717,0.00034198244,0.00020012526,0.00030122313,0.00028624732,0.0005662196,0.0001602268,0.00032683313,0.0009907995],"category_scores_gemma":[0.00010903812,0.00012256573,0.00034252246,0.00021623439,0.00026002005,0.00026555723,0.00023117867,0.0007959173,0.00038575364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041068523,0.00003226982,0.0007911108,0.00008187489,0.000008125598,0.0001803366,0.000022222383,0.00012075689,0.99436474,0.00020258647,0.0001603947,0.0036247703],"study_design_scores_gemma":[0.000035950092,0.00019521703,0.03966215,0.00003059348,0.000048478563,0.0009928022,0.00013986997,0.0020467283,0.94919705,0.00031851942,0.0073155933,0.000016995244],"about_ca_topic_score_codex":0.0014140839,"about_ca_topic_score_gemma":0.00094093627,"teacher_disagreement_score":0.0014140839,"about_ca_system_score_codex":0.0005538854,"about_ca_system_score_gemma":0.0003381562,"threshold_uncertainty_score":0.0040187836},"labels":[],"label_agreement":null},{"id":"W2400844733","doi":"10.1152/ajpgi.2001.280.2.g291","title":"Endothelial E- and P-selectin expression in iNOS- deficient mice exposed to polymicrobial sepsis","year":2001,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Sepsis; Nitric oxide synthase; Lipopolysaccharide; E-selectin; Myeloperoxidase; Endothelium; Selectin; Peritonitis; Peritoneum; Cell adhesion molecule; In vivo; VCAM-1; Biology; Nitric oxide; Lung; Immunology; Inflammation; Chemistry; Medicine; Adhesion; Cell adhesion; Internal medicine; Endocrinology; ICAM-1; Pathology","score_opus":0.007065399625514914,"score_gpt":0.21546373370755403,"score_spread":0.20839833408203912,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400844733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99807274,0.00047368335,0.00090068695,0.00005801509,0.00001487835,0.000008810844,0.00018754364,0.000023826584,0.00025985163],"genre_scores_gemma":[0.9952449,0.00084740616,0.0015773436,0.00007935207,0.000021204496,0.00004758171,0.0005472906,0.000025892708,0.0016088575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979633,0.000052105377,0.000027792317,0.000036977537,0.000038029928,0.00004875964],"domain_scores_gemma":[0.99963677,0.000035480214,0.00011880707,0.00003422332,0.00002822284,0.00014646433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026214108,0.00052765664,0.00040753308,0.00041755676,0.00017419684,0.00034044118,0.00018742355,0.00041588413,0.0013063058],"category_scores_gemma":[0.00026013385,0.00036442623,0.00022208852,0.00015667341,0.0003566769,0.00031433246,0.00016805655,0.0009629871,0.0003371514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075841544,0.000095320494,0.0004922868,0.00003439148,0.0000063705456,0.00007768303,0.000021383115,0.000053873082,0.99773645,0.00007130791,0.000030385765,0.00062217226],"study_design_scores_gemma":[0.00021759697,0.002842622,0.030378465,0.000033408614,0.00007829555,0.001295407,0.00018406853,0.0019209423,0.9614881,0.00027036332,0.0012736869,0.000016986782],"about_ca_topic_score_codex":0.00016366558,"about_ca_topic_score_gemma":0.0001806603,"teacher_disagreement_score":0.0013063058,"about_ca_system_score_codex":0.00016873688,"about_ca_system_score_gemma":0.000109431334,"threshold_uncertainty_score":0.004369974},"labels":[],"label_agreement":null},{"id":"W2401355484","doi":"10.14670/hh-16.771","title":"Earliest lymphoid colonization of neonatal rat lymph nodes: an antigen-specific process?","year":2001,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Lymph node; Lymph; Antigen; Lymphatic system; Pathology; Population; Biology; Cell; Afferent; Immunology; Medicine; Anatomy","score_opus":0.014350984724687307,"score_gpt":0.21648212145337467,"score_spread":0.20213113672868738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401355484","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995789,0.0015102695,0.0014376192,0.000018258845,0.00000825539,0.000009273911,0.00009963454,0.000027005366,0.0011006285],"genre_scores_gemma":[0.99601823,0.0014409084,0.0010257664,0.000018427223,0.000009170267,0.000019818677,0.00013859446,0.0000075353755,0.0013216739],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999058,0.000015247895,0.000005398952,0.000028090624,0.000015682543,0.000029786415],"domain_scores_gemma":[0.99979156,0.000038497194,0.00005917013,0.00003095213,0.000039014554,0.000040906565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002221184,0.00022621016,0.00017772021,0.00027725115,0.00012989562,0.00021232948,0.00013620494,0.00017151627,0.0010469846],"category_scores_gemma":[0.0002829282,0.00012686169,0.00015777921,0.00009736651,0.0002833982,0.00032205004,0.00020364278,0.0002852592,0.0004585985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033633562,0.000015455144,0.006820443,0.00008734242,0.0000038683092,0.00040084514,0.00014921586,0.00004377489,0.9873825,0.00017219546,0.000018499166,0.0045695407],"study_design_scores_gemma":[0.000014092085,0.0020293114,0.1661934,0.0000558042,0.000054123306,0.0026851736,0.0006062899,0.000278611,0.8251089,0.00024883618,0.0027068765,0.000018684119],"about_ca_topic_score_codex":0.000554851,"about_ca_topic_score_gemma":0.0011607617,"teacher_disagreement_score":0.0010469846,"about_ca_system_score_codex":0.00019137344,"about_ca_system_score_gemma":0.00022438212,"threshold_uncertainty_score":0.0035024881},"labels":[],"label_agreement":null},{"id":"W2401394690","doi":"10.1128/microbiolspec.mchd-0007-2015","title":"Evolution of Myeloid Cells","year":2016,"lang":"en","type":"review","venue":"Microbiology Spectrum","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health","keywords":"Myeloid; Biology; Innate immune system; Context (archaeology); Immunity; Myeloid cells; Acquired immune system; Immune system; Immunology","score_opus":0.010823846033815518,"score_gpt":0.2454099163483151,"score_spread":0.23458607031449957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401394690","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011096897,0.9893305,0.0009917822,0.0013301149,0.00066843483,0.000013628178,0.0000331405,0.000019770721,0.006502887],"genre_scores_gemma":[0.015518505,0.9718693,0.001246056,0.001488702,0.00079579605,0.00003548725,0.000099826364,0.00001114457,0.008935258],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996644,0.00006330831,0.000036051253,0.00008923333,0.00010320867,0.000043770204],"domain_scores_gemma":[0.999835,0.000042363536,0.000021504162,0.000011555113,0.00006024921,0.000029348506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006807093,0.00056616106,0.00068168057,0.0013827368,0.0004445772,0.001195761,0.0006390778,0.0014113178,0.001910907],"category_scores_gemma":[0.00054371834,0.0002794216,0.00028723967,0.0008145968,0.0014109765,0.0017851995,0.001258194,0.0023049507,0.0018907764],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018314627,0.000042116368,0.00067054055,0.0042225765,0.000042850734,0.000572967,0.0004357785,0.00045106406,0.015305787,0.073718436,0.017709736,0.886645],"study_design_scores_gemma":[0.0000068177283,0.000040798335,0.00059930305,0.00049305975,0.0000106516345,0.0010777573,0.000039534767,0.000037028713,0.0020324,0.0039743767,0.99167824,0.000010043225],"about_ca_topic_score_codex":0.00086231687,"about_ca_topic_score_gemma":0.00073541724,"teacher_disagreement_score":0.001910907,"about_ca_system_score_codex":0.0013535247,"about_ca_system_score_gemma":0.001218036,"threshold_uncertainty_score":0.0098205805},"labels":[],"label_agreement":null},{"id":"W2404326603","doi":"10.1385/1-59259-367-4:219","title":"Superantigen-Induced Changes in Epithelial Ion Transport and Barrier Function: Use of an In Vitro Model","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Medical Research Council; Canadian Institutes of Health Research","keywords":"Cell biology; Immune system; Microfold cell; Enteroendocrine cell; Intestinal epithelium; Barrier function; Small intestine; Epithelium; Biology; Microbiology; Microvillus; Glycocalyx; In vitro; Chemistry; Immunology; Biochemistry; Endocrine system; Hormone; Membrane","score_opus":0.053184103000745754,"score_gpt":0.2429269963715194,"score_spread":0.18974289337077366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404326603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9832856,0.0056639668,0.0056696413,0.00037153278,0.00024297427,0.00018303319,0.00062591344,0.00010794726,0.0038493418],"genre_scores_gemma":[0.9834759,0.0048738657,0.0062558316,0.00017619443,0.00008559241,0.00021928358,0.001028985,0.000051791878,0.003832585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896014,0.00038468462,0.00012047712,0.00013035879,0.00019618821,0.00020819895],"domain_scores_gemma":[0.9989785,0.00039997182,0.00014979116,0.0002510689,0.00009070592,0.00012991588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001316438,0.001138584,0.0009201641,0.0006461971,0.0005923866,0.0009912754,0.0011324206,0.0013924794,0.0021164948],"category_scores_gemma":[0.00065045373,0.00053656043,0.001501925,0.0006454127,0.0007903471,0.0013503078,0.00068260886,0.0026791908,0.0007166779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008817685,0.00067414617,0.00032936072,0.00018097875,0.000022250546,0.00035835485,0.00012090993,0.00033565328,0.9956145,0.000486904,0.000089365865,0.0009058871],"study_design_scores_gemma":[0.00009844491,0.004412005,0.0029800825,0.000022546097,0.000070024056,0.00052897603,0.00015806161,0.0028756307,0.9867841,0.00025956452,0.0017881321,0.000022443188],"about_ca_topic_score_codex":0.0026454206,"about_ca_topic_score_gemma":0.0024247195,"teacher_disagreement_score":0.0026454206,"about_ca_system_score_codex":0.0011661141,"about_ca_system_score_gemma":0.0005630911,"threshold_uncertainty_score":0.00846082},"labels":[],"label_agreement":null},{"id":"W2404362072","doi":"10.1097/mib.0000000000000408","title":"Type 3 Muscarinic Receptors Contribute to Clearance of Citrobacter rodentium","year":2015,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Fonds Wetenschappelijk Onderzoek; Hospital for Sick Children; Agricultural Research Service; U.S. Department of Veterans Affairs; National Institute of Allergy and Infectious Diseases; Vlaamse regering; U.S. Department of Agriculture","keywords":"Citrobacter rodentium; Biology; Immunology; Macrophage; Immune system; Muscarinic acetylcholine receptor; Receptor; In vitro; Biochemistry","score_opus":0.012897176699653205,"score_gpt":0.24120128613084793,"score_spread":0.22830410943119472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404362072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99354243,0.0036061322,0.0015822337,0.00019812668,0.000026735877,0.00004081512,0.00019659984,0.000074519325,0.0007322726],"genre_scores_gemma":[0.9958759,0.0011004948,0.0018485292,0.00014615561,0.000016958349,0.000048941245,0.00017292205,0.00001952192,0.0007705831],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975353,0.00004100296,0.000029699428,0.000049202707,0.00004663593,0.000080022226],"domain_scores_gemma":[0.99941945,0.000043113316,0.00030727906,0.000053005006,0.00005394147,0.00012325232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030924805,0.00058003806,0.00035535765,0.00019574299,0.00014429081,0.0002906886,0.0002993525,0.0006431058,0.0010692303],"category_scores_gemma":[0.0003698337,0.00020292871,0.00050150807,0.000067596695,0.00035470544,0.00023408448,0.00035178388,0.00073194614,0.00031888482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007277795,0.000032830507,0.0022846654,0.000098494864,0.000011009729,0.00017641237,0.000024135315,0.0000485283,0.9947284,0.000048727903,0.00006780236,0.001751332],"study_design_scores_gemma":[0.00019292395,0.0038030378,0.14414148,0.00010638363,0.00020091684,0.0044985265,0.00025497773,0.0016891747,0.83999234,0.0003834582,0.004697791,0.000039009206],"about_ca_topic_score_codex":0.00054314267,"about_ca_topic_score_gemma":0.00053303776,"teacher_disagreement_score":0.0010692303,"about_ca_system_score_codex":0.00037545685,"about_ca_system_score_gemma":0.0002774463,"threshold_uncertainty_score":0.0035768747},"labels":[],"label_agreement":null},{"id":"W2405650697","doi":"10.1016/j.molimm.2016.05.005","title":"A mutated cholera toxin without the ADP-ribosyltransferase activity induces cytokine production and inhibits apoptosis of splenocytes in mice possibly via toll-like receptor-4 signaling","year":2016,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Splenocyte; Apoptosis; Cytokine; Tumor necrosis factor alpha; Cholera toxin; In vivo; Biology; Immunology; Signal transduction; Ex vivo; Toll-like receptor; Cancer research; Immune system; Cell biology; Endocrinology; Innate immune system; Biochemistry","score_opus":0.007581275717264654,"score_gpt":0.21789998557219684,"score_spread":0.21031870985493217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405650697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99767023,0.0006124948,0.0009401727,0.00007245831,0.000027311115,0.000020549794,0.00018724591,0.000043380867,0.000425957],"genre_scores_gemma":[0.9959246,0.00056667597,0.0012017535,0.00007744367,0.000010449682,0.00004356036,0.00050856435,0.000016073542,0.0016509085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982893,0.000020435338,0.000016522594,0.000032016906,0.000045185105,0.000056878627],"domain_scores_gemma":[0.9998766,0.000010490308,0.000048785696,0.000014009498,0.0000107253845,0.000039391947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011574559,0.0004786238,0.00030069804,0.00027107965,0.000080916696,0.00025938964,0.00019922112,0.00035649876,0.00060408295],"category_scores_gemma":[0.00010011822,0.00016994223,0.0003384405,0.00015135521,0.00025252815,0.0001858405,0.00015166959,0.00091668527,0.00017141244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016614981,0.00004140737,0.00008328778,0.000017666316,0.0000034883515,0.00002337828,0.000005423938,0.000032659227,0.999383,0.000020056013,0.000009096772,0.00021438522],"study_design_scores_gemma":[0.00006601264,0.0017385206,0.0041511375,0.000010270035,0.000021152315,0.00022478045,0.000029831652,0.000614745,0.9921881,0.000045147408,0.00090562983,0.000004777103],"about_ca_topic_score_codex":0.00063379895,"about_ca_topic_score_gemma":0.00088419305,"teacher_disagreement_score":0.00063379895,"about_ca_system_score_codex":0.00028589353,"about_ca_system_score_gemma":0.00025633664,"threshold_uncertainty_score":0.0020743012},"labels":[],"label_agreement":null},{"id":"W2406528391","doi":"10.14670/hh-15.199","title":"Current understanding of macrophage type 1 cytokine responses during intracellular infections.","year":2000,"lang":"en","type":"review","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Macrophage; Intracellular; Cytokine; Cell biology; Intracellular parasite; Biology; Immunology; Immunity; Acquired immune system; Effector; Interferon gamma; Tumor necrosis factor alpha; Interleukin 4; Immune system; In vitro; Genetics","score_opus":0.06214497866475928,"score_gpt":0.2836735255825787,"score_spread":0.22152854691781942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406528391","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014375038,0.9962088,0.0004826775,0.00034871453,0.000492648,0.0000053625386,0.000019421355,0.00002150878,0.0022771475],"genre_scores_gemma":[0.00089544425,0.9958448,0.0006653758,0.0004323207,0.00041310696,0.000013372664,0.00005056585,0.0000028584027,0.0016821],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997408,0.00005237684,0.000034834175,0.000047614307,0.00010250291,0.000021883989],"domain_scores_gemma":[0.99948263,0.00021433138,0.00008418886,0.000020872552,0.00012319171,0.00007475348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086683757,0.0015935949,0.0014268096,0.0018450998,0.00040694512,0.0013348368,0.0011525083,0.0016286379,0.0054889857],"category_scores_gemma":[0.00070186966,0.00027837392,0.0003586908,0.0028453872,0.0009195476,0.002997833,0.00075293833,0.0015945884,0.007951938],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012843074,0.000056429635,0.00023162065,0.01949592,0.00006215695,0.0004106467,0.00017265245,0.00039687476,0.0066569354,0.0043601636,0.03393195,0.9340962],"study_design_scores_gemma":[0.0000109849925,0.00008959276,0.0008507611,0.0030557755,0.00007682563,0.0018885158,0.000109042114,0.0000742236,0.00074405834,0.0031831695,0.98990154,0.000015513306],"about_ca_topic_score_codex":0.0007295937,"about_ca_topic_score_gemma":0.0009895426,"teacher_disagreement_score":0.0054889857,"about_ca_system_score_codex":0.0008135212,"about_ca_system_score_gemma":0.0015955702,"threshold_uncertainty_score":0.018362522},"labels":[],"label_agreement":null},{"id":"W2406928924","doi":"10.1021/nn505634h","title":"Amino Acid-Dependent Attenuation of Toll-like Receptor Signaling by Peptide-Gold Nanoparticle Hybrids","year":2015,"lang":"en","type":"article","venue":"ACS Nano","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of Toronto; BC Children's Hospital; University Health Network; University of British Columbia","funders":"Canadian Institutes of Health Research; Burroughs Wellcome Fund; Michael Smith Health Research BC; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; Crohn's and Colitis Foundation of Canada; University of British Columbia","keywords":"TLR4; Receptor; Signal transduction; Innate immune system; Lipopolysaccharide; Inflammation; Immune system; Toll-like receptor; Cell biology; Pattern recognition receptor; Peptide; Biology; Chemistry; Biochemistry; Immunology","score_opus":0.0171304021507204,"score_gpt":0.23392128704738632,"score_spread":0.21679088489666593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406928924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99427927,0.0007934632,0.0031285903,0.00006441134,0.000025845686,0.000019032803,0.000044590273,0.00006297088,0.0015817455],"genre_scores_gemma":[0.9970252,0.0002546461,0.0018626159,0.00004207774,0.0000052113137,0.00001402366,0.000037679667,0.000008546403,0.0007501215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992645,0.000014012789,0.0000053174886,0.00001656763,0.000021966742,0.000015637197],"domain_scores_gemma":[0.99995255,0.000014911805,0.0000140607835,0.000004000366,0.0000070109386,0.000007456752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009873174,0.00020315677,0.00012820534,0.0001024926,0.0000842117,0.00014371274,0.00013504851,0.00024318509,0.00050402764],"category_scores_gemma":[0.00013475484,0.000093284245,0.00011658547,0.000052511823,0.00013025868,0.00015355449,0.00013191852,0.00021762078,0.00011903152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031249296,0.0000080692835,0.000025024197,0.000016449989,0.000002766245,0.000017300776,0.0000046181203,0.00010414159,0.9989341,0.00008308484,0.000015277947,0.0007580086],"study_design_scores_gemma":[0.000004681683,0.000117377305,0.00020673711,0.0000010801266,0.0000031207944,0.00003433357,0.0000029747862,0.0005389584,0.99859875,0.000017264021,0.0004729437,0.0000018317323],"about_ca_topic_score_codex":0.00012504766,"about_ca_topic_score_gemma":0.00023204877,"teacher_disagreement_score":0.00050402764,"about_ca_system_score_codex":0.0001590867,"about_ca_system_score_gemma":0.000068405716,"threshold_uncertainty_score":0.0016860962},"labels":[],"label_agreement":null},{"id":"W2409158180","doi":"10.1038/srep21244","title":"Hyporesponsiveness to the anti-inflammatory action of interleukin-10 in type 2 diabetes","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":131,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Interleukin 10; Inflammation; Cytokine; Immunology; Tumor necrosis factor alpha; Type 2 diabetes; Medicine; Receptor; Diabetes mellitus; Endocrinology; Internal medicine; Biology","score_opus":0.013446752286614287,"score_gpt":0.24648466539919903,"score_spread":0.23303791311258473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409158180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900581,0.00688579,0.001316744,0.00018500774,0.0001129299,0.000013517686,0.00012995735,0.00003973664,0.0012581042],"genre_scores_gemma":[0.99407566,0.003839563,0.00069210085,0.00015133343,0.00008746771,0.000024771032,0.00020295003,0.000012295714,0.0009139156],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998548,0.00004114269,0.000017634231,0.000023826622,0.00003113516,0.000031439147],"domain_scores_gemma":[0.9998807,0.000019408502,0.000031389747,0.000013221747,0.00001234009,0.000042906333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030708747,0.0004091848,0.0003229235,0.00031850504,0.000102273225,0.00036500444,0.00014056358,0.00028467423,0.0010421145],"category_scores_gemma":[0.00020756561,0.00012685057,0.00028822452,0.00018654298,0.0002727336,0.00017888787,0.00018892458,0.00077106216,0.00020665152],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001047285,0.000103363425,0.003224238,0.000105636456,0.000014008088,0.00030565404,0.000028110317,0.000053400556,0.98817635,0.00006473044,0.00011164075,0.0067656054],"study_design_scores_gemma":[0.00021581822,0.004503395,0.27231625,0.000058858834,0.00018576098,0.0055603804,0.00034344714,0.001400864,0.7048944,0.00061638316,0.009870721,0.000033732067],"about_ca_topic_score_codex":0.00026706516,"about_ca_topic_score_gemma":0.0002556681,"teacher_disagreement_score":0.0010421145,"about_ca_system_score_codex":0.00018973423,"about_ca_system_score_gemma":0.00014771362,"threshold_uncertainty_score":0.0034862757},"labels":[],"label_agreement":null},{"id":"W2409254493","doi":"10.1385/1-59259-688-6:169","title":"Immunostimulatory CpG Motifs and DNA Vaccines","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"CpG site; Immune system; Secretion; Innate immune system; Biology; CpG Oligodeoxynucleotide; Lytic cycle; Cell biology; DNA; Immunology; Gene; DNA methylation; Gene expression; Genetics; Biochemistry","score_opus":0.022946687836951984,"score_gpt":0.23453114809758838,"score_spread":0.2115844602606364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409254493","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35837305,0.47070903,0.056130715,0.0071597584,0.004053201,0.0005849169,0.0010394888,0.00097045914,0.10097947],"genre_scores_gemma":[0.7499676,0.1399958,0.023884956,0.003249655,0.0021262486,0.00039416674,0.0010079117,0.00006970614,0.07930395],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9998878,0.000025369804,0.0000044257645,0.000016276239,0.00003927292,0.000026869553],"domain_scores_gemma":[0.999941,0.0000135452765,0.000012510297,0.0000028889326,0.0000058694272,0.00002425411],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016614949,0.00045508335,0.00025128262,0.00039171212,0.0000911841,0.0002556208,0.00026499876,0.00074954535,0.005846839],"category_scores_gemma":[0.00016106993,0.00008726143,0.000093977185,0.00016212912,0.00021020592,0.00027423783,0.0002622601,0.00050856476,0.0014091985],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070416107,0.0007274956,0.00046461186,0.0017528842,0.00003669752,0.00041969217,0.00006333426,0.0014287045,0.6068209,0.017330227,0.007136305,0.36311507],"study_design_scores_gemma":[0.00028631728,0.0037032992,0.0027519085,0.00042657854,0.00009869339,0.0020149124,0.00009922358,0.0023710723,0.5077095,0.015468062,0.46504474,0.000025631423],"about_ca_topic_score_codex":0.00011634159,"about_ca_topic_score_gemma":0.00022543356,"teacher_disagreement_score":0.005846839,"about_ca_system_score_codex":0.00021373098,"about_ca_system_score_gemma":0.00016989265,"threshold_uncertainty_score":0.019559562},"labels":[],"label_agreement":null},{"id":"W2410421212","doi":"10.1385/1-59259-688-6:95","title":"DNA-Based Immunization of Neonatal Mice","year":2003,"lang":"en","type":"article","venue":"Humana Press eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Immunization; Immune system; Offspring; Antigen; Immunology; Antibody; Medicine; Biology; Pregnancy; Genetics","score_opus":0.02219566843722509,"score_gpt":0.2321605482427678,"score_spread":0.2099648798055427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410421212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95347506,0.0044966307,0.027699418,0.0012404073,0.00081332383,0.00052758,0.0018435032,0.0009967039,0.008907261],"genre_scores_gemma":[0.95296156,0.005070418,0.02208943,0.00075060833,0.00017691802,0.0005310591,0.0023688881,0.0001172424,0.015933953],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962413,0.00007001685,0.000037141755,0.00011428067,0.00006731271,0.00008699522],"domain_scores_gemma":[0.99958974,0.000103059625,0.000114775445,0.00007240281,0.00003584175,0.00008413889],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006429437,0.0008175627,0.0005364305,0.00090486393,0.00023742467,0.00043220425,0.00090877194,0.0014787307,0.002704679],"category_scores_gemma":[0.00043396335,0.00034183805,0.0004012048,0.00026693,0.0006307187,0.0004842962,0.00037784263,0.0025651348,0.0014556707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029245226,0.00020279706,0.00018844682,0.00011999,0.000014756594,0.00008367127,0.000053018393,0.00019802223,0.99344397,0.00067704386,0.00015918729,0.0045667286],"study_design_scores_gemma":[0.00012192025,0.0015179147,0.001386308,0.00006635261,0.00004044153,0.00029520114,0.00003779414,0.00097249245,0.9887822,0.00044821703,0.006319596,0.000011500867],"about_ca_topic_score_codex":0.000455368,"about_ca_topic_score_gemma":0.0004541858,"teacher_disagreement_score":0.002704679,"about_ca_system_score_codex":0.0006708349,"about_ca_system_score_gemma":0.00035400782,"threshold_uncertainty_score":0.009048045},"labels":[],"label_agreement":null},{"id":"W2415630562","doi":"10.1097/shk.0000000000000474","title":"What's New in Shock? November 2015","year":2015,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Single-nucleotide polymorphism; Medicine; Pleasure; Bioinformatics; Psychology; Biology; Genetics; Neuroscience; Gene","score_opus":0.023969214853151195,"score_gpt":0.2739569629423766,"score_spread":0.2499877480892254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415630562","genre_codex":"editorial","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00070484454,0.21990389,0.00091079104,0.2290122,0.519941,0.000075372904,0.0007463975,0.0002875501,0.028418059],"genre_scores_gemma":[0.006013444,0.34806186,0.0011395427,0.1721434,0.40178218,0.000119896344,0.0014326379,0.00019472143,0.06911223],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99847656,0.00032043827,0.00024306017,0.00020357438,0.0005533195,0.00020303442],"domain_scores_gemma":[0.9949116,0.0012190369,0.00042906211,0.00012763176,0.0019107783,0.0014017854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022788674,0.00081262016,0.0011786725,0.0017568651,0.0013612676,0.0055343825,0.0013717533,0.0040424503,0.06910957],"category_scores_gemma":[0.011558351,0.0004134757,0.0010833581,0.0011346877,0.0011273989,0.0044169542,0.0017303828,0.0066666133,0.029028492],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010170478,0.000039568527,0.00046895625,0.0013551813,0.000022900396,0.00018130647,0.000059391576,0.00006435892,0.00016050627,0.0018369769,0.8552951,0.14041406],"study_design_scores_gemma":[0.00001633487,0.00005739799,0.00096009206,0.0021181272,0.000014315298,0.0004440306,0.00013354866,0.000048187732,0.00007043522,0.001440718,0.99467635,0.000020421372],"about_ca_topic_score_codex":0.0012092533,"about_ca_topic_score_gemma":0.0026396147,"teacher_disagreement_score":0.06910957,"about_ca_system_score_codex":0.0020788447,"about_ca_system_score_gemma":0.0024395948,"threshold_uncertainty_score":0.2311945},"labels":[],"label_agreement":null},{"id":"W2416781505","doi":"10.1111/imm.12627","title":"Toll‐like receptor‐2 exacerbates murine acute viral hepatitis","year":2016,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TLR2; Mouse hepatitis virus; Virology; Immunology; Biology; Microbiology; Medicine; Innate immune system; Immune system; Pathology; Infectious disease (medical specialty)","score_opus":0.0049271856337570015,"score_gpt":0.21293584186169875,"score_spread":0.20800865622794176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416781505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972646,0.0005656179,0.0005589216,0.0001034705,0.000050486105,0.00007250349,0.00026373102,0.00011549013,0.0010051124],"genre_scores_gemma":[0.9958405,0.00044744337,0.000643491,0.00012076853,0.00003453427,0.00007368969,0.000385903,0.000034357276,0.0024192587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99951744,0.00011911063,0.000059759648,0.00008206232,0.00008676589,0.00013481836],"domain_scores_gemma":[0.99941695,0.000057117355,0.00017414003,0.000048861864,0.000033614313,0.00026931294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037931296,0.0011950321,0.0005173171,0.0006418276,0.00027255891,0.00037253558,0.00023895144,0.00077927177,0.0017295823],"category_scores_gemma":[0.00021104519,0.00041436922,0.0004512519,0.00018437713,0.00035962518,0.0003746186,0.00038792056,0.0016231464,0.00049593643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017262485,0.0005924373,0.0013370147,0.000094574825,0.000016094617,0.00053989555,0.00008980205,0.00016304234,0.99371403,0.00012559228,0.00011708878,0.001484277],"study_design_scores_gemma":[0.0005348816,0.02068138,0.06053007,0.000078554076,0.00010763499,0.0042769355,0.00040754446,0.003842935,0.9049871,0.00036148675,0.004139227,0.000052102714],"about_ca_topic_score_codex":0.0003729158,"about_ca_topic_score_gemma":0.00063446275,"teacher_disagreement_score":0.0017295823,"about_ca_system_score_codex":0.00043792935,"about_ca_system_score_gemma":0.00023150888,"threshold_uncertainty_score":0.0057860017},"labels":[],"label_agreement":null},{"id":"W2417041468","doi":"10.14288/1.0073595","title":"Ontogeny and genetic correlates of the TLR mediated pediatric innate immune response","year":2013,"lang":"en","type":"article","venue":"cIRcle (University of British Columbia)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Innate immune system; Immune system; Immunology; Biology; Medicine","score_opus":0.003808826019984841,"score_gpt":0.14995442177111068,"score_spread":0.14614559575112585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417041468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995739,0.0008281637,0.00025054172,0.00011777355,0.000007619287,0.000010267274,0.00051354786,0.000009926587,0.002523208],"genre_scores_gemma":[0.9955017,0.0015695625,0.00038651723,0.000034970457,0.000012431474,0.000022909091,0.00042161613,0.00001186137,0.002038372],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975604,0.000049327147,0.000010269611,0.00005470937,0.0000716209,0.000058063964],"domain_scores_gemma":[0.9994981,0.00007385512,0.00018505285,0.000029731653,0.00010875221,0.00010440172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027988604,0.00018870656,0.00015655438,0.0010401822,0.0004452371,0.0006493757,0.00027435343,0.00031447486,0.0020181953],"category_scores_gemma":[0.00085606176,0.0001426987,0.00012585788,0.00066698034,0.0004453551,0.00017287493,0.00039471049,0.0004998935,0.00036638253],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009294528,0.00016402047,0.8741414,0.00006492338,0.00004467253,0.0018408837,0.001343197,0.00033985265,0.080503486,0.0022222223,0.00069557194,0.037710212],"study_design_scores_gemma":[0.0000017658307,0.000056151686,0.99676454,0.000014202271,0.000006889779,0.0004521792,0.0002792846,0.00005692194,0.0014035606,0.00012581165,0.0008349045,0.000003911145],"about_ca_topic_score_codex":0.021028575,"about_ca_topic_score_gemma":0.02254916,"teacher_disagreement_score":0.021028575,"about_ca_system_score_codex":0.0007835089,"about_ca_system_score_gemma":0.0008550899,"threshold_uncertainty_score":0.04181236},"labels":[],"label_agreement":null},{"id":"W2418325077","doi":"","title":"Inflammation 2003-Sixth World Congress. 2-6 August 2003, Vancouver, Canada.","year":2003,"lang":"en","type":"other","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Political science; History","score_opus":0.007947158337005612,"score_gpt":0.1834091014683226,"score_spread":0.175461943131317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418325077","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022743393,0.17642118,0.0018833693,0.01137238,0.016120313,0.00047044645,0.019153817,0.0013771628,0.77092695],"genre_scores_gemma":[0.0014837962,0.042432114,0.0003179359,0.0004097617,0.00038247608,0.00006759583,0.0019943414,0.00013412532,0.95277786],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99957734,0.000022661163,0.000023888666,0.000054722444,0.00021753753,0.00010386248],"domain_scores_gemma":[0.9987583,0.000084546,0.000056160596,0.000028999786,0.00067032315,0.00040157742],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00070587895,0.0021547065,0.0018151625,0.0020196827,0.0026659553,0.0044395253,0.0015054295,0.002825254,0.43929175],"category_scores_gemma":[0.00089391053,0.0006255231,0.00076760945,0.004098349,0.00071865483,0.0010904907,0.0012263984,0.002203914,0.25008893],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020675213,0.000043466036,0.00018684751,0.00058797403,0.000015346506,0.00010134145,0.00003705762,0.00016774895,0.00062054745,0.0005786097,0.9030085,0.09444581],"study_design_scores_gemma":[0.00002984269,0.000033739434,0.0019073675,0.00047699423,0.000017998345,0.00008006076,0.000105036845,0.00007102473,0.00029675715,0.0002606283,0.99670416,0.000016417134],"about_ca_topic_score_codex":0.20050174,"about_ca_topic_score_gemma":0.66692096,"teacher_disagreement_score":0.79949826,"about_ca_system_score_codex":0.0039033454,"about_ca_system_score_gemma":0.007213086,"threshold_uncertainty_score":0.7997823},"labels":[],"label_agreement":null},{"id":"W2419402007","doi":"","title":"[Role of progesterone in acylation stimulating protein-receptor C5L2 pathway in adipocytes and preadipocytes].","year":2008,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"","keywords":"Internal medicine; Endocrinology; Receptor; Messenger RNA; Progesterone receptor; Western blot; Adipocyte; Chemistry; Mole; Protein kinase A; Blot; Phosphorylation; Biology; Adipose tissue; Medicine; Biochemistry; Gene","score_opus":0.013612935445275538,"score_gpt":0.1934232413279415,"score_spread":0.17981030588266597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419402007","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7608514,0.2216332,0.0049296157,0.0016045794,0.00046818997,0.0001806907,0.0021125437,0.00012992178,0.00808984],"genre_scores_gemma":[0.9407258,0.046570506,0.0020005417,0.00051352935,0.00010619818,0.00011257551,0.0018365394,0.000012842647,0.008121388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999063,0.000008963831,0.000006515016,0.000025579546,0.000024765513,0.000027789461],"domain_scores_gemma":[0.9999666,0.0000037119542,0.000009121079,0.0000032014275,0.0000075179437,0.000009729286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011709373,0.00041300952,0.00019901947,0.00021100233,0.00032218054,0.000263983,0.00027836437,0.00042251294,0.0013947058],"category_scores_gemma":[0.00012544596,0.00013092165,0.00029120842,0.0002528124,0.000300374,0.00025294552,0.00021270415,0.00033271592,0.00046633036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002447884,0.000059411068,0.0042846017,0.001256968,0.000057722456,0.0016768486,0.00015341844,0.00025799393,0.9583979,0.0011232552,0.0013883671,0.02889554],"study_design_scores_gemma":[0.000366214,0.0022510544,0.1617769,0.0001795004,0.0003177977,0.006612059,0.00056702376,0.001516792,0.75307643,0.0010126319,0.07227188,0.000051811665],"about_ca_topic_score_codex":0.0056826565,"about_ca_topic_score_gemma":0.004935664,"teacher_disagreement_score":0.0056826565,"about_ca_system_score_codex":0.00063819985,"about_ca_system_score_gemma":0.00044795038,"threshold_uncertainty_score":0.011299133},"labels":[],"label_agreement":null},{"id":"W2420202036","doi":"10.1016/j.imbio.2016.06.009","title":"Toll-like receptor stimulation in cancer: A pro- and anti-tumor double-edged sword","year":2016,"lang":"en","type":"review","venue":"Immunobiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":218,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Université Pierre et Marie Curie; Université Paris Descartes; Fondation ARC pour la Recherche sur le Cancer; Institut National de la Santé et de la Recherche Médicale","keywords":"Immune system; Receptor; Inflammation; Innate immune system; Toll-like receptor; Biology; Tumor microenvironment; Cancer research; Stimulation; Immunology; Cell biology; Cancer cell; Cancer; Neuroscience","score_opus":0.03658804820500713,"score_gpt":0.3305327066975541,"score_spread":0.293944658492547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2420202036","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006523768,0.99862087,0.0000928162,0.00036064177,0.00048092357,0.0000020163516,0.00001002368,0.000005091161,0.0003623552],"genre_scores_gemma":[0.0006133196,0.9976598,0.00011766979,0.0003435408,0.0007073666,0.0000028929696,0.000019743142,0.0000010586994,0.00053470203],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998124,0.00002818433,0.000026703174,0.000032844775,0.000074600925,0.000025248517],"domain_scores_gemma":[0.9997236,0.00010396024,0.000042579628,0.000009185073,0.00007540725,0.000045266857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006410033,0.0008728311,0.0013453779,0.0011806958,0.00022285747,0.0011284798,0.00084994023,0.0013444192,0.0030416963],"category_scores_gemma":[0.00064342737,0.00022659678,0.00037320988,0.0013766316,0.0006208858,0.0017597149,0.00091440673,0.0022068005,0.0019629279],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014579343,0.000055054483,0.00016032322,0.008986515,0.000056212124,0.000156146,0.0000404462,0.00021182292,0.0025219114,0.0032522616,0.04596142,0.9384522],"study_design_scores_gemma":[0.00003074435,0.00013234433,0.000637938,0.0022110408,0.00009022938,0.0012342526,0.00007258291,0.000093458104,0.00061444595,0.0024297524,0.99243164,0.000021492247],"about_ca_topic_score_codex":0.0004170028,"about_ca_topic_score_gemma":0.00084482227,"teacher_disagreement_score":0.0030416963,"about_ca_system_score_codex":0.00046734873,"about_ca_system_score_gemma":0.00093439844,"threshold_uncertainty_score":0.010175467},"labels":[],"label_agreement":null},{"id":"W2422086590","doi":"10.4142/jvs.2017.18.1.17","title":"Expression of von Willebrand factor, pulmonary intravascular macrophages, and Toll-like receptors in lungs of septic foals","year":2017,"lang":"en","type":"article","venue":"Journal of Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"University of Saskatchewan","keywords":"Inflammation; Medicine; Foal; Sepsis; Pathology; Lung; Von Willebrand factor; Peripheral blood mononuclear cell; Immunology; Biology; Internal medicine; Platelet","score_opus":0.01679335951282181,"score_gpt":0.2762504070323517,"score_spread":0.2594570475195299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422086590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981248,0.00086186,0.0005575072,0.000031678177,0.0000060692705,0.000010011671,0.0000841547,0.000011020024,0.00031295308],"genre_scores_gemma":[0.9975569,0.0004934239,0.0008972477,0.00004126483,0.000008961065,0.000032455613,0.00016453049,0.0000051661214,0.0007999385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980956,0.00002973967,0.000018956815,0.000043795684,0.000052289204,0.000045630473],"domain_scores_gemma":[0.999718,0.000038768052,0.00010777052,0.000017228913,0.000038153914,0.000080130725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021398772,0.00021434855,0.00019805688,0.0007967903,0.00023310809,0.00026882865,0.00013344838,0.0003663916,0.00076945603],"category_scores_gemma":[0.0004331913,0.00019852331,0.00012382645,0.00012824852,0.0004307751,0.00026057893,0.00022796201,0.0003468144,0.00019707582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005300164,0.00004079143,0.011818136,0.00007310025,0.000011582729,0.00064492837,0.00019325566,0.000032699278,0.9844082,0.00006186691,0.000042520787,0.0021427807],"study_design_scores_gemma":[0.00004100014,0.0021944896,0.6274761,0.0000622992,0.00009088024,0.0075621963,0.0019787482,0.001047748,0.357253,0.00030215367,0.001958898,0.00003247987],"about_ca_topic_score_codex":0.0004453585,"about_ca_topic_score_gemma":0.0006981409,"teacher_disagreement_score":0.0007967903,"about_ca_system_score_codex":0.0002424602,"about_ca_system_score_gemma":0.00014794592,"threshold_uncertainty_score":0.0025741458},"labels":[],"label_agreement":null},{"id":"W2463284495","doi":"10.1152/ajpgi.2001.281.3.g654","title":"NO-mesalamine protects colonic epithelial cells against apoptotic damage induced by proinflammatory cytokines","year":2001,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":true,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Proinflammatory cytokine; Apoptosis; Cell biology; Chemistry; Cancer research; Inflammation; Immunology; Medicine; Biology; Biochemistry","score_opus":0.005814206408391632,"score_gpt":0.20353659005371724,"score_spread":0.1977223836453256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463284495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961056,0.002278379,0.0005002438,0.00009308368,0.000033655913,0.000017230857,0.000105847954,0.000038718365,0.00082726893],"genre_scores_gemma":[0.99595994,0.00105635,0.0010079867,0.000059606326,0.000013246765,0.000015769978,0.0002963303,0.000004981038,0.0015857464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989307,0.000023779952,0.0000143083535,0.000015224482,0.00002554842,0.000028065737],"domain_scores_gemma":[0.9998809,0.00002009153,0.00002498498,0.000021082406,0.000018564322,0.000034332046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001146009,0.0002601616,0.0002911632,0.00014182647,0.00015106959,0.00020257398,0.00017383017,0.00026802887,0.0007469744],"category_scores_gemma":[0.0001699134,0.00014828982,0.00015148762,0.000072126226,0.00016016052,0.00018079505,0.00014293907,0.00041980116,0.00024394398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005445945,0.00006344098,0.00018278278,0.00004643969,0.0000059643594,0.00003668847,0.00000947315,0.000035942532,0.99718875,0.000028208335,0.000024606892,0.0018332037],"study_design_scores_gemma":[0.000090097215,0.0025008204,0.005030062,0.000010067181,0.000018097922,0.0002331817,0.000029852805,0.00041484577,0.9900248,0.00003081424,0.001613182,0.0000042762554],"about_ca_topic_score_codex":0.00051824865,"about_ca_topic_score_gemma":0.0014650946,"teacher_disagreement_score":0.0007469744,"about_ca_system_score_codex":0.00016300399,"about_ca_system_score_gemma":0.00028752626,"threshold_uncertainty_score":0.0024988651},"labels":[],"label_agreement":null},{"id":"W2463321422","doi":"10.3899/jrheum.151386","title":"Cell Membrane-bound TLR2 and TLR4: Potential Predictors of Active Systemic Lupus Erythematosus and Lupus Nephritis","year":2016,"lang":"en","type":"letter","venue":"The Journal of Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"TLR2; Lupus nephritis; Immunology; Medicine; TLR4; TLR9; Immune system; Rheumatology; Innate immune system; Receptor; Nephritis; Peripheral blood mononuclear cell; Anti-nuclear antibody; Lupus erythematosus; Internal medicine; Autoantibody; Biology; Antibody; Gene; Biochemistry; Gene expression","score_opus":0.004571530769910778,"score_gpt":0.19014169191417482,"score_spread":0.18557016114426406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463321422","genre_codex":"editorial","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02195858,0.09317557,0.0017579857,0.34155574,0.5376349,0.00007958529,0.0009726108,0.00017215736,0.0026928363],"genre_scores_gemma":[0.07761216,0.027721455,0.0011052866,0.07655318,0.806218,0.00007504407,0.0005034914,0.0000720568,0.010139247],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99899083,0.00030091277,0.00019896081,0.00020051174,0.00020246633,0.000106230604],"domain_scores_gemma":[0.9927753,0.003032933,0.0005752573,0.00017460891,0.0024511272,0.0009907671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030588869,0.0011155747,0.0015736971,0.0010019261,0.000500687,0.0016920859,0.0015965725,0.0036991655,0.0049380297],"category_scores_gemma":[0.009133074,0.000411917,0.000470266,0.00065188174,0.00083693885,0.001430795,0.00041517286,0.004052971,0.0020328977],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039826776,0.0002140163,0.02405381,0.002751451,0.00046563524,0.0046057906,0.00021499657,0.00022671164,0.0024458484,0.0010862178,0.8534735,0.106479414],"study_design_scores_gemma":[0.0011692741,0.0013743571,0.07840019,0.0030105617,0.0015976542,0.019200116,0.0011053353,0.006239695,0.003469765,0.0044030966,0.87978375,0.0002462001],"about_ca_topic_score_codex":0.0006782251,"about_ca_topic_score_gemma":0.0008387691,"teacher_disagreement_score":0.0049380297,"about_ca_system_score_codex":0.00042356466,"about_ca_system_score_gemma":0.0006746295,"threshold_uncertainty_score":0.016519368},"labels":[],"label_agreement":null},{"id":"W2467146152","doi":"10.1016/j.chom.2016.06.002","title":"CRIg Functions as a Macrophage Pattern Recognition Receptor to Directly Bind and Capture Blood-Borne Gram-Positive Bacteria","year":2016,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":231,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipoteichoic acid; Peptidoglycan; Biology; Microbiology; Staphylococcus aureus; Complement receptor; Bacteria; Macrophage; Complement system; Gram-negative bacteria; Complement receptor 1; Phagocytosis; Immunology; Antibody; In vitro; Escherichia coli; Biochemistry","score_opus":0.005206324256600556,"score_gpt":0.19760113417150757,"score_spread":0.192394809914907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467146152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89082503,0.039072532,0.036175683,0.0012200036,0.00064537296,0.00065307383,0.002023216,0.0017958246,0.02758927],"genre_scores_gemma":[0.9380685,0.008038679,0.027967976,0.0013506323,0.00018745888,0.00019099672,0.002158441,0.00012638578,0.021911101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99951494,0.000068159294,0.000015925665,0.000110948204,0.00010365237,0.0001863646],"domain_scores_gemma":[0.9996853,0.00003234885,0.00007247529,0.000030851268,0.000059878595,0.00011921246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003440229,0.0013016986,0.0007281333,0.0010373237,0.00042891354,0.0007809574,0.0008738713,0.0011922097,0.003377394],"category_scores_gemma":[0.00047784724,0.00029867774,0.00070029387,0.0005505355,0.0005108903,0.00043225556,0.00095451745,0.0009952585,0.003594313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003847877,0.000052928397,0.0018912319,0.00021769729,0.000031877942,0.0005631204,0.00003775335,0.00015717128,0.9814559,0.00059717277,0.001595272,0.0130151035],"study_design_scores_gemma":[0.000084793406,0.0007687667,0.014451788,0.00005528204,0.00007149124,0.0033427123,0.00019613114,0.0035729073,0.94422644,0.00031612857,0.032860927,0.000052613683],"about_ca_topic_score_codex":0.0021417162,"about_ca_topic_score_gemma":0.0030588196,"teacher_disagreement_score":0.003377394,"about_ca_system_score_codex":0.0009755981,"about_ca_system_score_gemma":0.00054946844,"threshold_uncertainty_score":0.011298537},"labels":[],"label_agreement":null},{"id":"W2473378026","doi":"10.1038/cmi.2016.32","title":"Sam68 is a regulator of Toll-like receptor signaling","year":2016,"lang":"en","type":"article","venue":"Cellular and Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Eye Institute; McGill University; National Institutes of Health; Case Western Reserve University","keywords":"TLR3; TLR2; Cell biology; MAPK/ERK pathway; Signal transduction; Kinase; Biology; Toll-like receptor; Innate immune system; Regulator; TLR4; Receptor; Gene; Biochemistry","score_opus":0.005046705889021481,"score_gpt":0.19273598909152656,"score_spread":0.18768928320250508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473378026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9195749,0.05241752,0.013211344,0.00041880872,0.0003499211,0.00010454128,0.0015669884,0.0007148083,0.011641216],"genre_scores_gemma":[0.982475,0.0057274085,0.0035929107,0.00013113605,0.000118303564,0.000053153864,0.0015119673,0.000040673094,0.0063494835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998616,0.000025359946,0.000009310808,0.000033605633,0.000037451347,0.00003267041],"domain_scores_gemma":[0.9998772,0.00000853317,0.00005165016,0.0000065302534,0.000020480906,0.000035644505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010582309,0.00064893486,0.000239041,0.00037902503,0.00028032082,0.00027289227,0.00019398828,0.00024992664,0.0021154375],"category_scores_gemma":[0.00011341343,0.00013729533,0.00025830226,0.0001956497,0.00013903633,0.00017888958,0.0002921971,0.00032397255,0.0011546649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026480548,0.000017785413,0.0005817598,0.00013448461,0.0000122843985,0.00024817095,0.000015216414,0.00004350532,0.9916163,0.00021208209,0.00023904433,0.0066145486],"study_design_scores_gemma":[0.000045595814,0.000659624,0.016846523,0.000038178056,0.000050664796,0.0021130403,0.00005933514,0.00079820066,0.94093966,0.00042234696,0.0380052,0.000021653848],"about_ca_topic_score_codex":0.00014481749,"about_ca_topic_score_gemma":0.0001279883,"teacher_disagreement_score":0.0021154375,"about_ca_system_score_codex":0.00016793048,"about_ca_system_score_gemma":0.000113844784,"threshold_uncertainty_score":0.0070768},"labels":[],"label_agreement":null},{"id":"W2475715907","doi":"10.1016/j.immuni.2016.07.015","title":"Lyn Kinase Suppresses the Transcriptional Activity of IRF5 in the TLR-MyD88 Pathway to Restrain the Development of Autoimmunity","year":2016,"lang":"en","type":"article","venue":"Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":106,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Japan Science and Technology Agency; Yokohama City University; Eisai Canada; Eisai; Ministry of Education, Culture, Sports, Science and Technology; Japan Society for the Promotion of Science","keywords":"LYN; IRF5; Interferon regulatory factors; Immunology; Transcription factor; Biology; Kinase; Autoimmunity; Cancer research; Immune system; Innate immune system; Cell biology; Proto-oncogene tyrosine-protein kinase Src; Gene; Genetics","score_opus":0.027364403916062263,"score_gpt":0.2567315130405002,"score_spread":0.22936710912443792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475715907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924428,0.0020741695,0.0026743882,0.00036924632,0.00017200231,0.000025329366,0.00023442786,0.0001565778,0.0018509917],"genre_scores_gemma":[0.9965312,0.0004607928,0.00075741444,0.00007630117,0.000023492923,0.000024691666,0.00019628314,0.000025008945,0.0019047571],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99939466,0.000119123935,0.00006399114,0.00007970755,0.000094683775,0.00024782497],"domain_scores_gemma":[0.999726,0.000027523836,0.00005855702,0.000048215585,0.000023999368,0.00011582145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005563518,0.00045432136,0.0005053672,0.00037961593,0.00030716884,0.00052462233,0.00040621377,0.00047307016,0.0032509055],"category_scores_gemma":[0.0003265245,0.00035365918,0.0005787627,0.00016812676,0.0005219929,0.00038402234,0.00046064018,0.0019732923,0.00088630343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010802228,0.00012873812,0.00031874113,0.000068771464,0.000013862102,0.00007759826,0.000020420382,0.00011792264,0.99538344,0.0003655279,0.00015378252,0.002270908],"study_design_scores_gemma":[0.00022723606,0.0008521677,0.0057897246,0.000021307444,0.00006180855,0.0003397092,0.000098456425,0.0017106308,0.98742306,0.00028224292,0.00317834,0.00001541606],"about_ca_topic_score_codex":0.0003088447,"about_ca_topic_score_gemma":0.00072090776,"teacher_disagreement_score":0.0032509055,"about_ca_system_score_codex":0.0003534455,"about_ca_system_score_gemma":0.0006323288,"threshold_uncertainty_score":0.010875344},"labels":[],"label_agreement":null},{"id":"W2475790156","doi":"10.3390/v8070207","title":"Local Innate Responses to TLR Ligands in the Chicken Trachea","year":2016,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Innate immune system; Biology; Interferon; Receptor; Immunology; RIG-I; Pattern recognition receptor; Immune system; Respiratory tract; Toll-like receptor; Microbiology; Respiratory system; Virology; Anatomy","score_opus":0.023986713476053502,"score_gpt":0.27453208100815096,"score_spread":0.25054536753209744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475790156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967618,0.0011102577,0.0011257891,0.00004680843,0.000012762636,0.000021102016,0.00014985756,0.000012928432,0.0007587096],"genre_scores_gemma":[0.9966852,0.0004330959,0.0012427289,0.000056104822,0.000008375781,0.00003613932,0.00023250302,0.0000048319666,0.0013011565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990606,0.000019843095,0.0000092748605,0.000029128434,0.000014036123,0.000021593323],"domain_scores_gemma":[0.9999201,0.000016651256,0.000019429492,0.000008904713,0.000015029863,0.000019800123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009189999,0.00017793132,0.00015736542,0.00016558456,0.00012452315,0.0002804523,0.00007170898,0.00025587514,0.0005334996],"category_scores_gemma":[0.00008917067,0.00014960785,0.00018943092,0.000048770547,0.00019971884,0.00015462795,0.00015416612,0.0003786303,0.0002574594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004015914,0.0000031764994,0.00018841993,0.00001775442,7.5892865e-7,0.000022889211,0.00001398253,0.000011248638,0.9995521,0.000011730368,0.0000045874135,0.00013331497],"study_design_scores_gemma":[0.000018905408,0.0006270569,0.03304827,0.000030736035,0.000023640507,0.000371557,0.00035904985,0.0007048557,0.9635229,0.00007556497,0.0012083687,0.000008946624],"about_ca_topic_score_codex":0.00037976902,"about_ca_topic_score_gemma":0.0007043731,"teacher_disagreement_score":0.0005334996,"about_ca_system_score_codex":0.00020495745,"about_ca_system_score_gemma":0.0001301683,"threshold_uncertainty_score":0.0017846823},"labels":[],"label_agreement":null},{"id":"W2482594761","doi":"10.1002/glia.23033","title":"TGFβ regulates persistent neuroinflammation by controlling Th1 polarization and ROS production via monocyte‐derived dendritic cells","year":2016,"lang":"en","type":"article","venue":"Glia","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"ASTER","funders":"Multiple Sclerosis Society; Uppsala Multidisciplinary Center for Advanced Computational Science; Schweizerische Multiple Sklerose Gesellschaft; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Experimental autoimmune encephalomyelitis; Biology; Immunology; Microglia; Neuroinflammation; Multiple sclerosis; Myeloid; Transforming growth factor; Monocyte; Cancer research; Cell biology; Inflammation","score_opus":0.005848499389767862,"score_gpt":0.18514775407752515,"score_spread":0.1792992546877573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2482594761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9958079,0.0022939043,0.0008366271,0.00007463876,0.000021130169,0.000010583523,0.00009772634,0.00002925216,0.0008282695],"genre_scores_gemma":[0.9973423,0.0012623671,0.00049910805,0.000035338096,0.000013625493,0.000010829778,0.00007519321,0.0000066983703,0.00075461564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999188,0.000017699369,0.000005789124,0.000012722386,0.000018083778,0.000026833535],"domain_scores_gemma":[0.9999411,0.000004877458,0.000025043048,0.0000044722487,0.0000075041066,0.000017012964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011065665,0.0002489727,0.0001557817,0.00018104727,0.00009828189,0.00026154716,0.00007010195,0.000121439705,0.00050302525],"category_scores_gemma":[0.00008661743,0.00009778429,0.00010870622,0.000095817464,0.00017588137,0.000091946094,0.00014785482,0.00033136265,0.00019689175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002604058,0.000027962798,0.0015624951,0.000025982716,0.000006138951,0.00007844351,0.000029907436,0.00003338828,0.9950872,0.000062163555,0.000043755965,0.0027821818],"study_design_scores_gemma":[0.00019342503,0.00097228534,0.07841404,0.00004509715,0.000103606435,0.00093275413,0.00024781493,0.0019432924,0.9107427,0.00058959523,0.005804741,0.000010620464],"about_ca_topic_score_codex":0.00036433764,"about_ca_topic_score_gemma":0.00059943245,"teacher_disagreement_score":0.00050302525,"about_ca_system_score_codex":0.00015005545,"about_ca_system_score_gemma":0.00018732903,"threshold_uncertainty_score":0.0016828179},"labels":[],"label_agreement":null},{"id":"W2500944829","doi":"10.3389/fimmu.2016.00291","title":"Insights into Soluble Toll-Like Receptor 2 as a Downregulator of Virally Induced Inflammation","year":2016,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Immune system; Pathogen-associated molecular pattern; Biology; Toll-like receptor; TLR2; Inflammation; Cell biology; Pattern recognition receptor; Innate immune system; Antigen; Receptor; Immunology; Signal transduction; Acquired immune system; Genetics","score_opus":0.011182941430450587,"score_gpt":0.25444854952659113,"score_spread":0.24326560809614053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2500944829","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008128492,0.98493236,0.0016298667,0.0011711181,0.00054134295,0.000016226239,0.000099979494,0.000044554185,0.0034360453],"genre_scores_gemma":[0.044121083,0.94932127,0.0016391625,0.00095429947,0.00088478316,0.000037586196,0.00021376231,0.000010606548,0.0028175404],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998933,0.000021983638,0.000015527929,0.000020752288,0.000027986147,0.000020468231],"domain_scores_gemma":[0.9999255,0.00001875936,0.000017342076,0.0000036976123,0.000020441465,0.000014318973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003000194,0.00047443013,0.00062815513,0.0007411117,0.00012251758,0.0007828525,0.00034624175,0.0005579654,0.0012917657],"category_scores_gemma":[0.00018044612,0.00014217947,0.0005019129,0.00038008814,0.00025549435,0.0006559094,0.0002985072,0.0010801398,0.00045776993],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094990764,0.00030601257,0.002171722,0.020297853,0.00034869963,0.0030589702,0.00044842652,0.0010522002,0.26996616,0.019690754,0.017587712,0.6641216],"study_design_scores_gemma":[0.00015269748,0.0017055123,0.015390574,0.002845838,0.0007305354,0.007501718,0.0004665022,0.0017759505,0.05757899,0.012477771,0.89926976,0.000104060244],"about_ca_topic_score_codex":0.00022955592,"about_ca_topic_score_gemma":0.00033082196,"teacher_disagreement_score":0.0012917657,"about_ca_system_score_codex":0.0003714451,"about_ca_system_score_gemma":0.0005359256,"threshold_uncertainty_score":0.0043213367},"labels":[],"label_agreement":null},{"id":"W2507511859","doi":"10.1016/j.imbio.2016.08.013","title":"Pneumococcal DnaJ modulates dendritic cell-mediated Th1 and Th17 immune responses through Toll-like receptor 4 signaling pathway","year":2016,"lang":"en","type":"article","venue":"Immunobiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China; McGill University Health Centre","keywords":"Toll-like receptor; Immune system; Cell biology; Signal transduction; Dendritic cell; Immunology; Receptor; Biology; Toll; Innate immune system; Genetics","score_opus":0.010417361124593499,"score_gpt":0.22203654419115104,"score_spread":0.21161918306655755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2507511859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99419844,0.002001985,0.0011235566,0.00020411338,0.00012667452,0.00002880076,0.00040150512,0.00006157442,0.0018532267],"genre_scores_gemma":[0.9955379,0.00077977136,0.0007309743,0.00008759303,0.000024317722,0.000029376275,0.00033693254,0.000013811466,0.0024592981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996264,0.000059999624,0.000025980644,0.000047450667,0.00008062874,0.00015946369],"domain_scores_gemma":[0.9998481,0.00001746526,0.00004725889,0.00001339643,0.0000243576,0.000049458027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017360422,0.00042454008,0.00029719528,0.00039319793,0.00024546005,0.0004659891,0.00018620126,0.0004320057,0.0022205918],"category_scores_gemma":[0.00024289566,0.00020423548,0.00036789666,0.00016023827,0.00044671993,0.00040960533,0.0003066492,0.00093396765,0.00050960924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006900886,0.000087215274,0.0005042456,0.000066239685,0.000007947007,0.0000682944,0.000017078519,0.0000657138,0.9967198,0.00012087182,0.00007194873,0.001580549],"study_design_scores_gemma":[0.000077659555,0.0006588018,0.015577956,0.000016872631,0.00004905907,0.00019311525,0.00015770929,0.0010272572,0.97908634,0.00022021394,0.0029182136,0.000016880982],"about_ca_topic_score_codex":0.00076294795,"about_ca_topic_score_gemma":0.0011541124,"teacher_disagreement_score":0.0022205918,"about_ca_system_score_codex":0.0005727578,"about_ca_system_score_gemma":0.00054628897,"threshold_uncertainty_score":0.007428646},"labels":[],"label_agreement":null},{"id":"W2517398070","doi":"10.1038/srep31695","title":"Curcumin suppresses NTHi-induced CXCL5 expression via inhibition of positive IKKβ pathway and up-regulation of negative MKP-1 pathway","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of General Medical Sciences; National Institute on Deafness and Other Communication Disorders; Georgia Research Alliance","keywords":"Wogonin; MAPK/ERK pathway; p38 mitogen-activated protein kinases; Chemokine; CXCL5; Signal transduction; Curcumin; NF-κB; Phosphorylation; Biology; Medicine; Immunology; Pharmacology; Inflammation; Cell biology; Traditional Chinese medicine","score_opus":0.009318754403471564,"score_gpt":0.21947603907456656,"score_spread":0.21015728467109498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2517398070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9817583,0.0103078,0.003127413,0.0005889743,0.00019029644,0.00008513295,0.0004436785,0.00020118602,0.0032972204],"genre_scores_gemma":[0.991565,0.0038298438,0.0014062279,0.00013050527,0.000030083758,0.0000846569,0.00034328352,0.000017701139,0.002592633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999318,0.000013086212,0.000008355725,0.000009647806,0.000013788131,0.000023232604],"domain_scores_gemma":[0.99994993,0.000008570925,0.000013312092,0.000005352894,0.000008843982,0.000013960895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000086779066,0.00045186316,0.00028124783,0.00026305893,0.00013420639,0.00013714694,0.00014110237,0.0001739575,0.0016800243],"category_scores_gemma":[0.00009466731,0.0000968474,0.00027168458,0.00008182306,0.00021900624,0.0002013646,0.00017492087,0.0005442076,0.0003247379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072559493,0.00018802677,0.00019866574,0.0003435802,0.000017540577,0.000086540866,0.000023173578,0.000060544866,0.99393684,0.000051877272,0.0002412454,0.0041264277],"study_design_scores_gemma":[0.000134561,0.0013950707,0.0066971374,0.00003058995,0.000056125107,0.00034402247,0.000062241714,0.0007365755,0.9851195,0.00009893089,0.0053151716,0.0000100170055],"about_ca_topic_score_codex":0.0006477035,"about_ca_topic_score_gemma":0.0013231888,"teacher_disagreement_score":0.0016800243,"about_ca_system_score_codex":0.00020116063,"about_ca_system_score_gemma":0.00028879885,"threshold_uncertainty_score":0.005620241},"labels":[],"label_agreement":null},{"id":"W2518307266","doi":"10.1002/eji.201546178","title":"Aging of the immune system: Focus on inflammation and vaccination","year":2016,"lang":"en","type":"review","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":444,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health and Social Services Centre University Institute of Geriatrics of Sherbrooke; Université de Sherbrooke","funders":"National Institute on Aging; National Institutes of Health; Agence Nationale de la Recherche; Agency for Science, Technology and Research; Canadian Institutes of Health Research; Ministero dell’Istruzione, dell’Università e della Ricerca; National Institute of Allergy and Infectious Diseases; European Commission; Université de Sherbrooke","keywords":"Biology; Immune system; Inflammation; Vaccination; Focus (optics); Immunology","score_opus":0.01424197475623569,"score_gpt":0.24565635564640498,"score_spread":0.2314143808901693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2518307266","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007092916,0.9986681,0.00007900256,0.00024248625,0.00040979718,0.0000026860955,0.0000064764827,0.0000045980664,0.0005159326],"genre_scores_gemma":[0.00040306922,0.9984865,0.0001050379,0.00018385178,0.00035655202,0.0000043758987,0.000013736777,0.0000011505127,0.00044568875],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978083,0.00003772487,0.000036408688,0.000041337185,0.000075411,0.000028365097],"domain_scores_gemma":[0.9995627,0.00021268005,0.00005034703,0.000014666654,0.000110460984,0.0000491333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067453436,0.0009804617,0.0014495288,0.0021127055,0.00033240806,0.0010491771,0.0009054961,0.0014697417,0.0032025974],"category_scores_gemma":[0.0008690469,0.00027564444,0.00046125727,0.0018134562,0.00057081843,0.0019263679,0.0008813483,0.0023900156,0.0020799013],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009410537,0.000098677934,0.00018620252,0.018496558,0.0000709545,0.00022564353,0.00011225482,0.00027776684,0.0022255525,0.0052067605,0.03661133,0.9363942],"study_design_scores_gemma":[0.000013842388,0.00014335976,0.000797373,0.0047834804,0.00006689355,0.0014308494,0.00008356751,0.000071189,0.00042583086,0.002040789,0.99012774,0.000014933016],"about_ca_topic_score_codex":0.0005525653,"about_ca_topic_score_gemma":0.0010284994,"teacher_disagreement_score":0.0032025974,"about_ca_system_score_codex":0.00054662576,"about_ca_system_score_gemma":0.0010432648,"threshold_uncertainty_score":0.0107136965},"labels":[],"label_agreement":null},{"id":"W2519298775","doi":"","title":"Novel signaling paradigm regulating TOLL-like receptors in innate immune cells","year":2014,"lang":"en","type":"article","venue":"Journal of Clinical & Cellular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Ectodomain; Cell biology; TLR9; Innate immune system; Receptor; Biology; Toll-like receptor; Signal transduction; Biochemistry","score_opus":0.02488642588983156,"score_gpt":0.2923888281559245,"score_spread":0.2675024022660929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2519298775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63081723,0.226021,0.0874347,0.006829775,0.0036713465,0.00046633082,0.0016275382,0.0010528519,0.04207917],"genre_scores_gemma":[0.89621276,0.05775352,0.02477986,0.0021402966,0.0011461165,0.00030685813,0.0014572772,0.000049629874,0.016153643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976104,0.000033846685,0.00001588194,0.00006942413,0.00006466624,0.000055160723],"domain_scores_gemma":[0.9999517,0.0000038961807,0.000009463916,0.000003620809,0.00001290737,0.00001848913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020413655,0.00057280995,0.0003806128,0.0002844591,0.00035988944,0.0007868673,0.00034621003,0.0006284548,0.0023956639],"category_scores_gemma":[0.00007462935,0.000117764794,0.00035024007,0.0001697856,0.00033627456,0.0007740957,0.00035822997,0.0010860509,0.0010655619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019852213,0.000040509152,0.00017047526,0.000374112,0.000009985801,0.0005256233,0.00006178481,0.000066580986,0.98407656,0.006692287,0.00049147796,0.0072921347],"study_design_scores_gemma":[0.00018377081,0.0011362,0.006318942,0.0002459728,0.00011946282,0.006964206,0.00049835653,0.0031783092,0.85233396,0.012411897,0.1165385,0.00007034192],"about_ca_topic_score_codex":0.00008250456,"about_ca_topic_score_gemma":0.0001010504,"teacher_disagreement_score":0.0023956639,"about_ca_system_score_codex":0.00043502013,"about_ca_system_score_gemma":0.00028124894,"threshold_uncertainty_score":0.008014262},"labels":[],"label_agreement":null},{"id":"W2520338817","doi":"10.1097/01.jto.0000282978.73370.61","title":"M17-04: TLR9 agonists","year":2007,"lang":"en","type":"article","venue":"Journal of Thoracic Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"TLR9; Toll-Like Receptor 9; Innate immune system; CpG Oligodeoxynucleotide; CpG site; Toll-like receptor; Immune system; Proinflammatory cytokine; Biology; Receptor; Immunology; Gene; Cancer research; Genetics; Inflammation; DNA methylation; Gene expression","score_opus":0.016522163634744052,"score_gpt":0.38079443214208913,"score_spread":0.36427226850734507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2520338817","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95499474,0.011188035,0.003797179,0.0035163427,0.0021095532,0.0002469562,0.0037956021,0.00062838057,0.019723292],"genre_scores_gemma":[0.9628281,0.004537277,0.0054455576,0.0012842383,0.00033294677,0.00033504187,0.0032896115,0.00011056366,0.02183669],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99945635,0.00013510369,0.00004078854,0.00006394092,0.000067739806,0.00023602825],"domain_scores_gemma":[0.9998099,0.000032171814,0.00003240973,0.000029766892,0.000016848071,0.00007890085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042967658,0.00072200916,0.00048783922,0.0006566406,0.00054648996,0.00068409473,0.0006931631,0.0009685317,0.01566865],"category_scores_gemma":[0.0003171908,0.00035105168,0.0005944122,0.00037686274,0.0004350755,0.00047028033,0.0005812864,0.0024883624,0.005327638],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015840461,0.0024914695,0.0018574338,0.0005920903,0.00015157307,0.00085208373,0.00006832859,0.0011687627,0.90971583,0.0021886765,0.01083303,0.054240216],"study_design_scores_gemma":[0.0017224991,0.0076027666,0.003904,0.000084458785,0.00014483485,0.002912828,0.00015786263,0.0014087504,0.928673,0.0006164937,0.052727386,0.000045185807],"about_ca_topic_score_codex":0.0005321456,"about_ca_topic_score_gemma":0.0006855756,"teacher_disagreement_score":0.01566865,"about_ca_system_score_codex":0.00047190973,"about_ca_system_score_gemma":0.0007704132,"threshold_uncertainty_score":0.05241692},"labels":[],"label_agreement":null},{"id":"W2522253433","doi":"10.1371/journal.ppat.1005807","title":"Heptose Sounds the Alarm: Innate Sensing of a Bacterial Sugar Stimulates Immunity","year":2016,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Immunity; ALARM; Microbiology; Biology; Chemistry; Immunology; Immune system; Engineering","score_opus":0.015861869415587194,"score_gpt":0.2218219285653549,"score_spread":0.2059600591497677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2522253433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6375783,0.13317086,0.038093034,0.021036673,0.021288317,0.00042294725,0.0037386757,0.003015198,0.14165603],"genre_scores_gemma":[0.865588,0.03533778,0.012604912,0.0061057014,0.0026182886,0.00010659775,0.0014141536,0.000142793,0.076081835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979,0.000032655396,0.000009155877,0.000037165388,0.00007985948,0.000051209983],"domain_scores_gemma":[0.9998629,0.00001662755,0.000021869844,0.000009432053,0.000023849821,0.000065335706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002483951,0.0005021656,0.00034455265,0.00039759406,0.0005364888,0.001560459,0.0002427232,0.0008750453,0.007820801],"category_scores_gemma":[0.00028741307,0.00014959315,0.00025138038,0.0003243094,0.000684396,0.0008549885,0.0011052202,0.001226261,0.002217126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002604904,0.00019766243,0.0024484254,0.0008796995,0.000053320095,0.001939694,0.00026584973,0.0002838891,0.81602055,0.020366963,0.02037678,0.13456225],"study_design_scores_gemma":[0.00019902675,0.0021656295,0.025010122,0.00044574752,0.00014962872,0.0071970983,0.001095353,0.0017260974,0.56792724,0.02819241,0.36572835,0.00016325951],"about_ca_topic_score_codex":0.00017978699,"about_ca_topic_score_gemma":0.00018934351,"teacher_disagreement_score":0.007820801,"about_ca_system_score_codex":0.0003481245,"about_ca_system_score_gemma":0.00044794395,"threshold_uncertainty_score":0.02616322},"labels":[],"label_agreement":null},{"id":"W2526967329","doi":"10.1038/ni.3564","title":"CCL19-CCR7–dependent reverse transendothelial migration of myeloid cells clears Chlamydia muridarum from the arterial intima","year":2016,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"CCL19; Chemokine; Myeloid; C-C chemokine receptor type 7; Chemokine receptor; Immunology; Monocyte; Biology; Cell biology; Medicine; Inflammation","score_opus":0.0035797384772302465,"score_gpt":0.1974134368422385,"score_spread":0.19383369836500824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2526967329","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875444,0.0019576952,0.0040784483,0.0006746079,0.0002751922,0.00012740065,0.00065492326,0.00015453249,0.0045327065],"genre_scores_gemma":[0.9841209,0.0011718525,0.004715367,0.00030341305,0.00011123104,0.000111164234,0.0011497465,0.000043823955,0.008272618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99940765,0.00010046173,0.000034826087,0.00006908461,0.000100013494,0.00028806317],"domain_scores_gemma":[0.9998103,0.000017972543,0.00003277833,0.000033774704,0.000037110996,0.000068163376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030756238,0.00046264392,0.0003329434,0.00038436812,0.0002993057,0.00055876985,0.00036992307,0.00047862198,0.003381131],"category_scores_gemma":[0.00018803573,0.00022992943,0.0004284516,0.00015961486,0.00026008178,0.0002950924,0.00041112438,0.001381193,0.002012379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027149115,0.00013177021,0.00019857202,0.00006148847,0.0000073723945,0.00007448561,0.000025597346,0.000044286073,0.9957482,0.00023072837,0.0004772089,0.0027288091],"study_design_scores_gemma":[0.00022139582,0.00079845794,0.009111939,0.000024604346,0.000042020056,0.00041075153,0.00017322326,0.0032047485,0.9766371,0.00013582518,0.009228069,0.0000118184735],"about_ca_topic_score_codex":0.0015683785,"about_ca_topic_score_gemma":0.0032518327,"teacher_disagreement_score":0.003381131,"about_ca_system_score_codex":0.00047229766,"about_ca_system_score_gemma":0.00068342814,"threshold_uncertainty_score":0.011310995},"labels":[],"label_agreement":null},{"id":"W2528401552","doi":"10.1007/978-1-4939-6445-1_22","title":"Screening Vaccine Formulations in Fresh Human Whole Blood","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Adjuvant; Human blood; Human use; Whole blood; Animal model; Computer science; Computational biology; Medicine; Biochemical engineering; Biology; Biotechnology; Immunology; Engineering; Physiology","score_opus":0.020754651406155546,"score_gpt":0.3653431810429386,"score_spread":0.34458852963678305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528401552","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9380046,0.005364667,0.04659943,0.00039710544,0.00035480966,0.001706045,0.0022960145,0.00029267988,0.0049846764],"genre_scores_gemma":[0.9281917,0.004028713,0.047160324,0.00053273124,0.00011305709,0.0009696831,0.0050045853,0.00011185348,0.013887195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995092,0.00014932505,0.000045490648,0.00008801075,0.00014068236,0.00006718647],"domain_scores_gemma":[0.999681,0.00015133315,0.000035661036,0.000028477289,0.00008328735,0.000020256435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009783113,0.0006651953,0.00031825856,0.0005147642,0.00019942218,0.0004494568,0.00042451153,0.00064001407,0.0029881245],"category_scores_gemma":[0.001247732,0.0003161197,0.0003594,0.00036844824,0.00022411402,0.00044111646,0.00022820992,0.0007390822,0.0010390739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034004924,0.00025557858,0.00047052317,0.00014080039,0.000022086704,0.000054156597,0.000055316454,0.00053419534,0.991598,0.00015400995,0.00032795256,0.006047249],"study_design_scores_gemma":[0.00006656962,0.002624095,0.0011096112,0.000028858189,0.00006150797,0.00011073557,0.000070821705,0.0011967145,0.99082386,0.00010554065,0.0037920428,0.000009578691],"about_ca_topic_score_codex":0.0006373151,"about_ca_topic_score_gemma":0.0008871289,"teacher_disagreement_score":0.0029881245,"about_ca_system_score_codex":0.00019247252,"about_ca_system_score_gemma":0.00034715395,"threshold_uncertainty_score":0.009996295},"labels":[],"label_agreement":null},{"id":"W2528496275","doi":"10.1016/j.bbrc.2016.10.007","title":"MyD88 contributes to neuroinflammatory responses induced by cerebral ischemia/reperfusion in mice","year":2016,"lang":"en","type":"article","venue":"Biochemical and Biophysical Research Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"American Stroke Association; Stroke Association; Heart and Stroke Foundation of Canada; American Heart Association","keywords":"IRF3; NFKB1; Ischemia; Receptor; IκBα; Knockout mouse; Signal transduction; Pharmacology; Inflammation; NF-κB; Chemistry; Medicine; Endocrinology; Transcription factor; Internal medicine; Biochemistry; Innate immune system","score_opus":0.04560598892434828,"score_gpt":0.3354312080770401,"score_spread":0.28982521915269177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528496275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912732,0.0023916168,0.0033096366,0.00060784945,0.00007483664,0.000101926424,0.0007761075,0.00019241213,0.0012724309],"genre_scores_gemma":[0.98561573,0.002968963,0.0048156455,0.00042701783,0.00006403951,0.00037803894,0.0011238063,0.00007836549,0.004528311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997433,0.000040018123,0.00003696401,0.00006842355,0.00004213515,0.000069141955],"domain_scores_gemma":[0.9997607,0.000008848652,0.000100658166,0.000022788861,0.000017366805,0.00008952331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003396468,0.0009497929,0.0005266136,0.00079963886,0.00026532388,0.00037320209,0.0003636641,0.0006712452,0.0021797523],"category_scores_gemma":[0.00017335378,0.00046286933,0.0006855864,0.00025102828,0.0005012612,0.00046943827,0.00042585292,0.001573065,0.00072007324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018302574,0.00041720376,0.0012384761,0.00018518548,0.000033253513,0.0003737756,0.00007344606,0.000101903956,0.99080515,0.00041999857,0.00024845585,0.0042728586],"study_design_scores_gemma":[0.0011689299,0.007265724,0.08804049,0.0002299051,0.00041066512,0.0064551234,0.00042540804,0.0041825688,0.87848145,0.0014511422,0.011821788,0.000066836044],"about_ca_topic_score_codex":0.00025370825,"about_ca_topic_score_gemma":0.00031545555,"teacher_disagreement_score":0.0021797523,"about_ca_system_score_codex":0.00035048136,"about_ca_system_score_gemma":0.00031995922,"threshold_uncertainty_score":0.0072919726},"labels":[],"label_agreement":null},{"id":"W2529690880","doi":"10.1111/mmi.13544","title":"A novel glycan modifies the flagellar filament proteins of the oral bacterium <i><scp>T</scp>reponema denticola</i>","year":2016,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases","keywords":"Treponema denticola; Glycan; Biology; Borrelia burgdorferi; Flagellin; Glycosylation; Microbiology; Treponema; Pathogen; Biochemistry; Bacteria; Gene; Genetics; Porphyromonas gingivalis; Virology; Antibody; Glycoprotein","score_opus":0.007471769010435788,"score_gpt":0.19668593620723845,"score_spread":0.18921416719680267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529690880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970571,0.0006820805,0.001119241,0.00005921411,0.0000152438,0.0000114001605,0.0001279431,0.000010756667,0.0009171204],"genre_scores_gemma":[0.99523634,0.0006761673,0.0022559834,0.000102484235,0.000012830061,0.00000887728,0.00051549583,0.0000053408576,0.0011865426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999503,0.000008035434,0.0000024788092,0.000011168348,0.000014087382,0.000013973008],"domain_scores_gemma":[0.9999578,0.0000037424722,0.00001814661,0.0000037545983,0.0000064108544,0.000010122114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060261333,0.0003240881,0.00008012765,0.00011272179,0.00013222794,0.0001612514,0.000107579624,0.00020812446,0.0002900751],"category_scores_gemma":[0.00008661537,0.000060448783,0.000184365,0.00012371597,0.00013885535,0.00014314544,0.00020204987,0.00025687,0.000084351625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006604256,0.000006891992,0.00082472863,0.00002400436,0.000006273711,0.0002136981,0.000012044623,0.000021572641,0.9969783,0.000055779827,0.0000356803,0.0017548873],"study_design_scores_gemma":[0.000014261308,0.00060052285,0.07736312,0.000016204052,0.00006554343,0.0031645861,0.000106465224,0.0010164173,0.91021657,0.0001227323,0.0072983685,0.000015234702],"about_ca_topic_score_codex":0.0005950678,"about_ca_topic_score_gemma":0.0007436919,"teacher_disagreement_score":0.0005950678,"about_ca_system_score_codex":0.0001445595,"about_ca_system_score_gemma":0.00015311528,"threshold_uncertainty_score":0.0011832714},"labels":[],"label_agreement":null},{"id":"W2529744408","doi":"10.1016/j.biomaterials.2016.09.032","title":"Endosomal pH modulation by peptide-gold nanoparticle hybrids enables potent anti-inflammatory activity in phagocytic immune cells","year":2016,"lang":"en","type":"article","venue":"Biomaterials","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of British Columbia; Child and Family Research Institute; University of Toronto; BC Children's Hospital","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Cystic Fibrosis Canada; Child and Family Research Institute; Crohn's and Colitis Foundation of Canada; Michael Smith Health Research BC","keywords":"Inflammation; Immune system; Innate immune system; Endosome; In vivo; Receptor; Signal transduction; Cell biology; Materials science; Immunology; Biology; Biochemistry","score_opus":0.008242195816294408,"score_gpt":0.21021472663307258,"score_spread":0.20197253081677818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529744408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99374133,0.0011300318,0.0033180634,0.00008266531,0.0000288741,0.000016714872,0.000041298394,0.00005132013,0.0015896439],"genre_scores_gemma":[0.9969517,0.00030203795,0.0014550387,0.000056174656,0.000008865959,0.000012809408,0.000035872286,0.000011114486,0.0011663918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983203,0.000030965428,0.000010053214,0.000039668892,0.000035003206,0.000052205127],"domain_scores_gemma":[0.9999238,0.0000250265,0.000017723105,0.000008855432,0.000010948512,0.000013555383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020896515,0.00029454066,0.00022345576,0.000113899296,0.00012526236,0.00037277912,0.00016883136,0.00047919172,0.00077271566],"category_scores_gemma":[0.00018305895,0.0001430817,0.00016796029,0.00008171686,0.00019316011,0.00030695164,0.0003030569,0.000339057,0.00025822446],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047444857,0.000007965635,0.000025382738,0.000016497404,0.0000023806735,0.000026201464,0.000008142303,0.000041830746,0.99911994,0.00007355239,0.000015560034,0.0006151203],"study_design_scores_gemma":[0.000005299171,0.00008562908,0.00028857373,0.0000017692757,0.000004460018,0.00006258678,0.0000074135583,0.00031493354,0.99870634,0.000017631875,0.0005029495,0.0000023601785],"about_ca_topic_score_codex":0.00011211269,"about_ca_topic_score_gemma":0.00023925715,"teacher_disagreement_score":0.00077271566,"about_ca_system_score_codex":0.00022231205,"about_ca_system_score_gemma":0.00011034812,"threshold_uncertainty_score":0.0025849938},"labels":[],"label_agreement":null},{"id":"W253076228","doi":"","title":"In vitro expression of tumor necrosis factor-alpha, interleukin 1beta, and interleukin 8 mRNA by bovine macrophages following exposure to Porphyromonas levii.","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tumor necrosis factor alpha; Lipopolysaccharide; Molecular biology; Biology; Interleukin; Cytokine; Proinflammatory cytokine; Macrophage; Interleukin 8; Immunology; In vitro; Microbiology; Inflammation; Biochemistry","score_opus":0.011128686409905771,"score_gpt":0.20481445745095547,"score_spread":0.1936857710410497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W253076228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99228704,0.004228042,0.0018978328,0.00007908492,0.000038571336,0.000019650586,0.0003364767,0.00001678843,0.0010965504],"genre_scores_gemma":[0.99380165,0.0016934774,0.0018862429,0.000089893176,0.000035039626,0.00006173532,0.0006741998,0.000009716391,0.0017479842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997516,0.00005301453,0.000020202573,0.000041407,0.000045508972,0.00008820377],"domain_scores_gemma":[0.9998229,0.000052343792,0.000049010123,0.00001776897,0.00003565059,0.00002235647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002512785,0.0002757204,0.00020935765,0.00015283594,0.00013138098,0.0003116665,0.000089300105,0.00021494264,0.0005561933],"category_scores_gemma":[0.00020631387,0.00016776197,0.00017404609,0.0001321057,0.00015922906,0.0001559269,0.00015731367,0.0002761463,0.00042855678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017019565,0.000012982838,0.0004150886,0.000031545755,0.0000017002027,0.00004387298,0.000043669523,0.000015320999,0.9988242,0.000008080747,0.000009123284,0.0004243506],"study_design_scores_gemma":[0.000041801002,0.0018780052,0.026662191,0.000028624854,0.000040462714,0.0006568301,0.0003474381,0.00080671225,0.96659684,0.00006321816,0.0028680163,0.000009853805],"about_ca_topic_score_codex":0.00075037155,"about_ca_topic_score_gemma":0.00092540076,"teacher_disagreement_score":0.00075037155,"about_ca_system_score_codex":0.00018775319,"about_ca_system_score_gemma":0.00012663254,"threshold_uncertainty_score":0.0018606782},"labels":[],"label_agreement":null},{"id":"W2533068958","doi":"10.5539/jmbr.v6n1p71","title":"Effect of a Mushroom (Coriolus versicolor) Based Probiotic on the Expression of Toll-like Receptors and Signal Transduction in Goat Neutrophils","year":2016,"lang":"en","type":"article","venue":"Journal of Molecular Biology Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Department of Agriculture","keywords":"Innate immune system; Biology; Trizol; Signal transduction; Gene expression; Receptor; Molecular biology; Gene; Toll-like receptor; Complementary DNA; Microbiology; Immunology; Andrology; RNA extraction; Cell biology; Biochemistry; Medicine","score_opus":0.01749927831260344,"score_gpt":0.3040329840762239,"score_spread":0.28653370576362047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2533068958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990282,0.0005312889,0.00008225794,0.000043135253,0.000017107432,0.000015270105,0.000082640865,0.0000071882764,0.00019286285],"genre_scores_gemma":[0.9974412,0.00057454983,0.0005861663,0.000062966574,0.000016126414,0.00003398461,0.00018945656,0.000006310168,0.0010893017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998455,0.000033150736,0.000014444207,0.000035471687,0.000022185528,0.00004921953],"domain_scores_gemma":[0.9997805,0.00004153182,0.000040191193,0.000014358929,0.000021508466,0.00010197005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027146967,0.00032928423,0.00047804523,0.00019626123,0.00015347428,0.0003024963,0.00022157562,0.00031175595,0.000786116],"category_scores_gemma":[0.00026674682,0.0001506553,0.0002506865,0.00015910628,0.0003462432,0.00022776125,0.00020043807,0.0005425657,0.00015131698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0058002686,0.00069676276,0.00050156534,0.00013942772,0.000015314447,0.00010623096,0.00009262008,0.0000633312,0.9906729,0.000024118892,0.000048181075,0.0018393581],"study_design_scores_gemma":[0.000440705,0.052012816,0.037604693,0.000051939103,0.0001784679,0.0003119882,0.000447093,0.0007960803,0.9058835,0.000063165324,0.0021714594,0.000038008195],"about_ca_topic_score_codex":0.0012441012,"about_ca_topic_score_gemma":0.0024345245,"teacher_disagreement_score":0.0012441012,"about_ca_system_score_codex":0.00019999286,"about_ca_system_score_gemma":0.00030366745,"threshold_uncertainty_score":0.0026298761},"labels":[],"label_agreement":null},{"id":"W2534384987","doi":"10.1038/srep35343","title":"Disabled-2 is a negative immune regulator of lipopolysaccharide-stimulated Toll-like receptor 4 internalization and signaling","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, New York University; Chang Gung Medical Foundation; York University","keywords":"TRIF; Cell biology; TLR4; Toll-like receptor; Endocytosis; Internalization; Biology; Signal transducing adaptor protein; Signal transduction; Endocytic cycle; Gene knockdown; Clathrin; Immune system; Receptor; Innate immune system; Immunology; Biochemistry; Gene","score_opus":0.008086630405928254,"score_gpt":0.22474630279389252,"score_spread":0.21665967238796427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2534384987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9724005,0.009429179,0.011091712,0.00026230534,0.00019312906,0.000048739257,0.0015037803,0.0002865762,0.0047840676],"genre_scores_gemma":[0.9924798,0.0013445183,0.0018565999,0.000074887794,0.000023756442,0.000024307707,0.0011123851,0.000023938086,0.0030598643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985194,0.000017604121,0.000009382571,0.000039383012,0.0000450883,0.000036566587],"domain_scores_gemma":[0.99989796,0.000007980244,0.00003834636,0.0000061731735,0.000014662174,0.0000348563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011376057,0.00043602378,0.00021370186,0.00022753139,0.00026564635,0.00037174832,0.00020369502,0.00021142745,0.0013639196],"category_scores_gemma":[0.00013780304,0.0001180012,0.00022703038,0.00014529469,0.00023578666,0.00023275916,0.0003968055,0.0003573881,0.0004630121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021039548,0.00001121039,0.0008356676,0.00008172663,0.000009470483,0.00023256164,0.0000123634345,0.00008576386,0.9961629,0.00030302757,0.0001654662,0.0018893321],"study_design_scores_gemma":[0.000071184804,0.00022542734,0.028061237,0.000025138059,0.00004943484,0.0025809018,0.00009578634,0.0036867189,0.94281006,0.00035050622,0.0220118,0.000031787913],"about_ca_topic_score_codex":0.00032526368,"about_ca_topic_score_gemma":0.00037399202,"teacher_disagreement_score":0.0013639196,"about_ca_system_score_codex":0.0003347876,"about_ca_system_score_gemma":0.00020680072,"threshold_uncertainty_score":0.004562795},"labels":[],"label_agreement":null},{"id":"W2537814831","doi":"10.1182/blood.v108.11.1093.1093","title":"Lipopolysaccharide Binds Platelet Toll-Like Receptor 4 and Mediates the Activation of Phagocytes in the Reticuloendothelial System (RES): A Novel Mechanism of Host Immunity.","year":2006,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"TLR4; Innate immune system; Biology; Lipopolysaccharide; Phagocytosis; Cell biology; Toll-like receptor; Platelet; Platelet activation; Receptor; Immune system; Tumor necrosis factor alpha; Phagocyte; Immunology; Biochemistry","score_opus":0.006343975100569715,"score_gpt":0.1947064103643068,"score_spread":0.18836243526373708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2537814831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94385695,0.027625864,0.021951001,0.0010419145,0.0003306574,0.00014741252,0.00039081837,0.00024859654,0.0044066897],"genre_scores_gemma":[0.987531,0.0038372248,0.004808134,0.00019480057,0.00010845149,0.00006297069,0.0003951815,0.000012674916,0.0030494859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974066,0.00011837571,0.000015555424,0.000036554495,0.000040436564,0.000048378464],"domain_scores_gemma":[0.99989796,0.000010785166,0.000045680008,0.000011369785,0.000014029679,0.000020195937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002477586,0.0006119227,0.00029270566,0.0002909864,0.00015740444,0.0003778122,0.00027470232,0.0005320784,0.0019261038],"category_scores_gemma":[0.00017569297,0.0001837173,0.00043520035,0.000089030145,0.0002538728,0.0004010719,0.0005493847,0.00051649427,0.0009302842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026092518,0.00003034874,0.0006287431,0.00020643107,0.000027738508,0.000657065,0.000019879495,0.00005328346,0.9934946,0.0005676175,0.00026781356,0.0037856528],"study_design_scores_gemma":[0.00012922734,0.0020226638,0.019574666,0.000062478706,0.00014535285,0.0054137683,0.00014385383,0.0029338135,0.9526212,0.0011328108,0.015794761,0.000025426772],"about_ca_topic_score_codex":0.00008085838,"about_ca_topic_score_gemma":0.00008664585,"teacher_disagreement_score":0.0019261038,"about_ca_system_score_codex":0.0002070894,"about_ca_system_score_gemma":0.00011668879,"threshold_uncertainty_score":0.006443441},"labels":[],"label_agreement":null},{"id":"W2547219477","doi":"10.1007/978-1-4939-6581-6_20","title":"Bacterial Binding, Phagocytosis, and Killing: Measurements Using Colony Forming Units","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"","keywords":"Phagocytosis; Opsonin; Bacterial colony; Microbiology; Colony-forming unit; Bacteria; Immunofluorescence; Phagocyte; Biology; Chemistry; Immunology; Antibody; Genetics","score_opus":0.07046223113161823,"score_gpt":0.3755385636216773,"score_spread":0.30507633249005905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2547219477","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4348734,0.01825944,0.49241778,0.0015527005,0.0018488148,0.0074882787,0.00973049,0.008130202,0.025698908],"genre_scores_gemma":[0.42495012,0.008312341,0.5191343,0.0009566541,0.00066659384,0.011747099,0.010323114,0.0009646893,0.022945022],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9821644,0.0049818987,0.0019200897,0.0019396556,0.007648121,0.0013459622],"domain_scores_gemma":[0.99130005,0.0032814697,0.0009532024,0.0013637583,0.002016829,0.0010846741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005012429,0.0053728665,0.003234264,0.0046676565,0.0016955812,0.0022837883,0.0031148915,0.0043311752,0.005523735],"category_scores_gemma":[0.005681929,0.0019650683,0.0014942319,0.006670514,0.0030091559,0.0018934727,0.0028281277,0.007183769,0.0043493207],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032151442,0.0022345537,0.0072806086,0.0010886042,0.00021727974,0.00019252104,0.0011086779,0.00086700503,0.9429355,0.0017952482,0.002327454,0.036737382],"study_design_scores_gemma":[0.00015524616,0.0028768324,0.014641981,0.00008628103,0.0001365188,0.00062561966,0.00034791435,0.0066854716,0.9696935,0.0008275087,0.003782111,0.00014096875],"about_ca_topic_score_codex":0.0013402937,"about_ca_topic_score_gemma":0.0013465547,"teacher_disagreement_score":0.005523735,"about_ca_system_score_codex":0.0007826243,"about_ca_system_score_gemma":0.0014727715,"threshold_uncertainty_score":0.02650857},"labels":[],"label_agreement":null},{"id":"W2548273177","doi":"10.1016/j.yhbeh.2016.10.022","title":"Local glucocorticoid production in lymphoid organs of mice and birds: Functions in lymphocyte development","year":2016,"lang":"en","type":"review","venue":"Hormones and Behavior","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Immune system; Biology; Immunology; Lymphocyte; T-cell receptor; Acquired immune system; Lymphatic system; Glucocorticoid; Spleen; Antigen; T lymphocyte; T cell; Lymphopoiesis; Immunity; Thymocyte; Cell biology; Haematopoiesis; Stem cell","score_opus":0.018763974254641453,"score_gpt":0.26418834787483225,"score_spread":0.2454243736201908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548273177","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00037936398,0.9985475,0.0002043311,0.00014664486,0.00014886486,0.0000024323629,0.000034186352,0.000007419048,0.00052928797],"genre_scores_gemma":[0.0023050383,0.9966042,0.0002291965,0.00011064231,0.00015254112,0.000004128142,0.000049471448,0.00000196414,0.0005427529],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99991024,0.00000841594,0.000013940957,0.0000247675,0.000031018277,0.000011679005],"domain_scores_gemma":[0.9998673,0.00003743535,0.00003151507,0.0000051269485,0.000033674034,0.000024847819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026161925,0.0006885319,0.00106495,0.0008529477,0.00012477954,0.00074398215,0.0005613872,0.0005554064,0.0013150608],"category_scores_gemma":[0.00030282064,0.0001775356,0.00022218026,0.0009898522,0.00046531108,0.0006795045,0.0005024643,0.0010032782,0.0006053284],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015921709,0.000027357126,0.0005273775,0.010523687,0.00007903163,0.00023980816,0.000049943454,0.00029088772,0.016160777,0.0015038152,0.009179115,0.96125895],"study_design_scores_gemma":[0.000030438227,0.00016635492,0.0061547393,0.0022972145,0.00035145233,0.0018989589,0.00020090186,0.00010056984,0.0056814216,0.0020630152,0.9810114,0.000043546017],"about_ca_topic_score_codex":0.0011481877,"about_ca_topic_score_gemma":0.0023386546,"teacher_disagreement_score":0.0013150608,"about_ca_system_score_codex":0.00044083965,"about_ca_system_score_gemma":0.00088485883,"threshold_uncertainty_score":0.0043992996},"labels":[],"label_agreement":null},{"id":"W2549312266","doi":"10.2147/ott.s109650","title":"Effect of smoking on the genetic makeup of toll-like receptors 2 and 6","year":2016,"lang":"en","type":"article","venue":"OncoTargets and Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"TLR2; Single-nucleotide polymorphism; Genotype; SNP; Medicine; Population; Innate immune system; Cotinine; Immunology; Saliva; Receptor; Nicotine; Internal medicine; Biology; Gene; Genetics; Environmental health","score_opus":0.006602049319220464,"score_gpt":0.22510039657051953,"score_spread":0.21849834725129907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2549312266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988574,0.00040839295,0.00010122384,0.000038472666,0.000017648741,0.0000044984913,0.0001069351,0.000004846512,0.00046066815],"genre_scores_gemma":[0.99916434,0.00011057355,0.00007991963,0.000023568258,0.00001013892,0.000005001279,0.00011255405,0.0000041878448,0.00048976095],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99964404,0.00012473438,0.000024153207,0.000093002156,0.000057489084,0.00005661583],"domain_scores_gemma":[0.9990295,0.00038544252,0.0001858975,0.00010910814,0.00009162103,0.00019840576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005234912,0.0004014294,0.00024969893,0.00032774798,0.00023476509,0.00037433198,0.00021503224,0.000490253,0.0039482787],"category_scores_gemma":[0.0012491888,0.00019217526,0.00067555084,0.0002398867,0.00021946905,0.00014912289,0.00021346929,0.00048367685,0.00031176637],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004865172,0.00026808764,0.970256,0.000031733784,0.0005622271,0.00032279707,0.00008808956,0.00005596457,0.01736683,0.000083023624,0.00013934729,0.005960669],"study_design_scores_gemma":[0.00003920792,0.000846161,0.99663025,0.000007685054,0.00034857634,0.00046188798,0.000039900213,0.00023138335,0.0010322344,0.00007782947,0.0002799082,0.000005000989],"about_ca_topic_score_codex":0.0013424314,"about_ca_topic_score_gemma":0.00076326646,"teacher_disagreement_score":0.0039482787,"about_ca_system_score_codex":0.00013004323,"about_ca_system_score_gemma":0.0001847472,"threshold_uncertainty_score":0.01320827},"labels":[],"label_agreement":null},{"id":"W2551648381","doi":"10.4049/jimmunol.1601024","title":"IL-17–Producing Innate and Pathogen-Specific Tissue Resident Memory γδ T Cells Expand in the Lungs of <i>Bordetella pertussis</i>–Infected Mice","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Bordetella pertussis; Innate immune system; Pathogen; Immunology; Microbiology; Biology; Whooping cough; Medicine; Bacteria; Immune system; Vaccination","score_opus":0.007875546339675231,"score_gpt":0.21665326938244167,"score_spread":0.20877772304276643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2551648381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946291,0.0011486018,0.0012129674,0.00019865022,0.000059339123,0.000054385484,0.0008487014,0.00017744525,0.0016708351],"genre_scores_gemma":[0.99135745,0.00074966106,0.0014916969,0.00032016603,0.00004733564,0.000102452,0.0012162087,0.00009250641,0.004622443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996165,0.000044526936,0.000040486833,0.00009790823,0.000063175736,0.00013731362],"domain_scores_gemma":[0.9995827,0.000063154075,0.00010154147,0.000046826262,0.000037742684,0.0001679605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000243984,0.0008301669,0.0005180205,0.0007785028,0.00032749437,0.0005372387,0.00024397191,0.0006969921,0.0020282413],"category_scores_gemma":[0.00019104381,0.00050741597,0.00055539684,0.00014650894,0.0005347268,0.00037888956,0.0002550473,0.0025729144,0.0008713756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002720521,0.00005143311,0.00046323583,0.000029899044,0.0000057382726,0.00007559067,0.00004240924,0.000033672583,0.99841774,0.000031524556,0.000047043584,0.000529567],"study_design_scores_gemma":[0.00010311292,0.0019172365,0.029548576,0.00006471524,0.000079347206,0.0010445745,0.00034750416,0.00094917277,0.96308,0.00012870273,0.0027134258,0.000023599912],"about_ca_topic_score_codex":0.00078507065,"about_ca_topic_score_gemma":0.00065927807,"teacher_disagreement_score":0.0020282413,"about_ca_system_score_codex":0.00043971295,"about_ca_system_score_gemma":0.0002384371,"threshold_uncertainty_score":0.0067850947},"labels":[],"label_agreement":null},{"id":"W2552852246","doi":"10.1136/bmjopen-2016-012908","title":"Polymyxin B-immobilised haemoperfusion and mortality in critically ill patients with sepsis/septic shock: a protocol for a systematic review and meta-analysis","year":2016,"lang":"en","type":"review","venue":"BMJ Open","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Japan Society for the Promotion of Science; Ministry of Education, Science and Technology; McGill University; Eli Lilly and Company; Ministry of Health, Labour and Welfare; McGill University Health Centre; Pfizer","keywords":"Medicine; Septic shock; Cochrane Library; Sepsis; Intensive care medicine; Adverse effect; Meta-analysis; Internal medicine","score_opus":0.11041851238264418,"score_gpt":0.4390656060051729,"score_spread":0.32864709362252875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2552852246","genre_codex":"protocol","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":"protocol","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016635129,0.0494855,0.0046656313,0.0011665502,0.00070839573,0.933238,0.0077286726,0.0003055816,0.0010380861],"genre_scores_gemma":[0.0022776243,0.013699091,0.0069294525,0.00057403126,0.00006266992,0.9747873,0.0010338334,0.000026052208,0.00060996925],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9719516,0.011927807,0.009958289,0.0020970728,0.003057735,0.0010075193],"domain_scores_gemma":[0.97445256,0.010945467,0.0073700347,0.0018222858,0.0045955526,0.0008141346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.051228065,0.0055249063,0.02691268,0.013557558,0.0025553398,0.007135526,0.0057474035,0.0063178865,0.036359135],"category_scores_gemma":[0.07082981,0.0038235027,0.03271086,0.01330835,0.002973849,0.0060975994,0.0048462306,0.0044206902,0.0029866262],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024124696,0.000072603565,0.0004144685,0.9672906,0.013107262,0.00019811522,0.00030827793,0.0004618052,0.00040407447,0.00087948656,0.00470773,0.009743086],"study_design_scores_gemma":[0.023727152,0.0017483537,0.00508694,0.70984745,0.17733863,0.00048259486,0.00073122175,0.0014843415,0.0012264717,0.00523949,0.072686546,0.0004008135],"about_ca_topic_score_codex":0.0065006563,"about_ca_topic_score_gemma":0.013436761,"teacher_disagreement_score":0.051228065,"about_ca_system_score_codex":0.013295139,"about_ca_system_score_gemma":0.036164187,"threshold_uncertainty_score":0.27092314},"labels":[],"label_agreement":null},{"id":"W2554235706","doi":"10.1183/13993003.congress-2015.oa3491","title":"LSC Abstract – Toll-like receptor 10: Expression and functional role in LPS mediated inflammation","year":2015,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Cell biology; TLR4; Innate immune system; Biology; Pattern recognition receptor; Toll-like receptor; Chemotaxis; Inflammation; Receptor; Immunology; Immune system; Signal transduction; Biochemistry","score_opus":0.0153303319918528,"score_gpt":0.2198453264279968,"score_spread":0.20451499443614402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2554235706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8305516,0.072670296,0.016559301,0.00630615,0.004407649,0.00031319674,0.017778808,0.0015066835,0.04990645],"genre_scores_gemma":[0.8396809,0.016178219,0.009232068,0.0019289061,0.001479965,0.00025210358,0.019082649,0.00022084214,0.111944295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997514,0.000038126047,0.000020704747,0.000051197945,0.00007641498,0.000062138504],"domain_scores_gemma":[0.9998356,0.000016129354,0.000030427838,0.000008944403,0.000046340927,0.00006252617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025773203,0.0007554042,0.00029002034,0.00057603937,0.00025056343,0.00041155863,0.00033534918,0.0008312378,0.02504381],"category_scores_gemma":[0.00015125035,0.00016723316,0.00043263353,0.00040374242,0.00028235692,0.00032352775,0.0003396531,0.0007621279,0.0069323657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010467218,0.000059968013,0.00037525862,0.00041175264,0.0000097775655,0.00036193634,0.000017657536,0.00006323171,0.98751825,0.00027214966,0.0029254144,0.0069378247],"study_design_scores_gemma":[0.00017293732,0.0015815345,0.022073407,0.00018324009,0.000073204625,0.0032427423,0.00010635295,0.00092250615,0.89674073,0.00054615753,0.07432059,0.00003644368],"about_ca_topic_score_codex":0.000880511,"about_ca_topic_score_gemma":0.00063624274,"teacher_disagreement_score":0.02504381,"about_ca_system_score_codex":0.0007919098,"about_ca_system_score_gemma":0.0003852957,"threshold_uncertainty_score":0.08377993},"labels":[],"label_agreement":null},{"id":"W2555913190","doi":"10.3389/fimmu.2016.00533","title":"Peptide IDR-1002 Inhibits NF-κB Nuclear Translocation by Inhibition of IκBα Degradation and Activates p38/ERK1/2–MSK1-Dependent CREB Phosphorylation in Macrophages Stimulated with Lipopolysaccharide","year":2016,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"CREB; Phosphorylation; Cell biology; CREB-binding protein; p38 mitogen-activated protein kinases; Inflammation; Signal transduction; Innate immune system; Transcription factor; NF-κB; Cyclic AMP Response Element-Binding Protein; Chemistry; Lipopolysaccharide; Coactivator; Biology; Immune system; Protein kinase A; Biochemistry; Immunology","score_opus":0.003990597474235667,"score_gpt":0.18747718406021985,"score_spread":0.18348658658598418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555913190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952998,0.0021234092,0.0009636426,0.00009829772,0.000048461436,0.000029754976,0.00017195233,0.00005921746,0.0012054467],"genre_scores_gemma":[0.9934151,0.0019934576,0.0011975766,0.000100578756,0.00002810893,0.00008561926,0.0006775719,0.00001722826,0.002484754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999143,0.0000180332,0.000009613122,0.000012347968,0.000020712901,0.00002494962],"domain_scores_gemma":[0.99994445,0.000012487965,0.000012749312,0.0000069730804,0.0000042971214,0.00001907739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011784972,0.0005370472,0.00034834133,0.00017425083,0.000091954775,0.00018052133,0.00019564372,0.00026797137,0.0015861266],"category_scores_gemma":[0.000109850276,0.00017680127,0.00024743497,0.00012810905,0.00026937693,0.00016734801,0.00013163379,0.0007666624,0.0005040363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000546383,0.00017343122,0.00006157764,0.000073422576,0.0000062280938,0.000064653905,0.000009674471,0.00007336393,0.9977581,0.000027142505,0.000042235522,0.0011638809],"study_design_scores_gemma":[0.00033130203,0.0029279212,0.003708537,0.000013313517,0.000018519419,0.00053966517,0.000036157155,0.00097253046,0.9893113,0.000071447255,0.002058681,0.00001068939],"about_ca_topic_score_codex":0.00022181131,"about_ca_topic_score_gemma":0.00031049442,"teacher_disagreement_score":0.0015861266,"about_ca_system_score_codex":0.00015272974,"about_ca_system_score_gemma":0.00018142606,"threshold_uncertainty_score":0.0053061843},"labels":[],"label_agreement":null},{"id":"W2557385370","doi":"10.1182/blood.v104.11.1887.1887","title":"Stimulation of Precursor-B Acute Lymphoblastic Leukemia Cells with Toll-Like Receptor Ligands Alters Their Immunogenicity.","year":2004,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Immune system; TLR2; Immunology; Immunogenicity; Toll-like receptor; Antigen; TLR3; Biology; B cell; T cell; TLR9; Cancer research; TLR4; Innate immune system; Antibody; DNA methylation","score_opus":0.005009751337599002,"score_gpt":0.19402109599224848,"score_spread":0.18901134465464947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2557385370","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653614,0.0006911139,0.00089389965,0.000039024984,0.000027545208,0.000040577277,0.00047191803,0.000028324639,0.0012715197],"genre_scores_gemma":[0.9948277,0.0005452705,0.0013036032,0.00005116466,0.000008912283,0.000083198196,0.0013819579,0.00000792359,0.001790237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983394,0.000046525638,0.00001929283,0.000020511256,0.000035803965,0.000043986496],"domain_scores_gemma":[0.9999175,0.000029222172,0.000012905931,0.000012461338,0.000013182875,0.000014664796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010637083,0.00027374984,0.00014808225,0.00015395501,0.00009284115,0.00020384345,0.000109991044,0.00017317008,0.0018717626],"category_scores_gemma":[0.000113170805,0.00010232161,0.00021595416,0.00013841964,0.000102941594,0.00013800159,0.00014503225,0.0004322712,0.0005563643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015727992,0.00004416726,0.00027317903,0.00003945389,0.000002553207,0.000031918935,0.000012818824,0.000024398176,0.9987488,0.00002482651,0.000026943937,0.0006137326],"study_design_scores_gemma":[0.000027662403,0.0010769763,0.009487607,0.000009453741,0.000018900062,0.0002605863,0.00006352964,0.0003851855,0.985941,0.000026783517,0.0026987547,0.0000035894025],"about_ca_topic_score_codex":0.00023432207,"about_ca_topic_score_gemma":0.00024651072,"teacher_disagreement_score":0.0018717626,"about_ca_system_score_codex":0.00012242695,"about_ca_system_score_gemma":0.0001016655,"threshold_uncertainty_score":0.0062617064},"labels":[],"label_agreement":null},{"id":"W2557439120","doi":"10.1182/blood.v116.21.870.870","title":"Therapeutic Potential for Toll-Like Receptor 2 Agonists In Pediatric Acute Lymphoblastic Leukemia (pre-B ALL): Induction of Apoptosis and Anti-ALL Immunogenicity","year":2010,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Immunology; Medicine; Leukemia; Minimal residual disease; Immunogenicity; Immune system; TLR9; Transplantation; Cancer research; Biology; Internal medicine","score_opus":0.006792298349318342,"score_gpt":0.22731221588079678,"score_spread":0.22051991753147843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2557439120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96508926,0.02656848,0.0038327395,0.00061922614,0.00021973067,0.00019788522,0.00022304665,0.00013643947,0.0031132444],"genre_scores_gemma":[0.98617953,0.009162332,0.0027733573,0.00018740934,0.00007776318,0.00014343885,0.00022369102,0.000008736378,0.001243763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999305,0.000023984736,0.000004967831,0.000007781328,0.000012783297,0.000019972855],"domain_scores_gemma":[0.999956,0.000011162682,0.000012967586,0.000004167997,0.0000053813797,0.000010351013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020944809,0.00026812547,0.00022136403,0.00019884574,0.00007503868,0.00021241675,0.00013811389,0.00022166649,0.001482834],"category_scores_gemma":[0.000104571,0.000071458526,0.000252249,0.00011481463,0.00014598724,0.00017521766,0.00016160235,0.0006660599,0.00027610682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033358329,0.001269313,0.0010707965,0.00083608605,0.000043289307,0.00028056756,0.000052278556,0.00050225575,0.9174544,0.0006858625,0.0007453613,0.07372383],"study_design_scores_gemma":[0.0012553544,0.041154504,0.009248727,0.000094323725,0.00026612703,0.002494212,0.00011108351,0.0014131615,0.9196843,0.00041769553,0.023847383,0.000013202372],"about_ca_topic_score_codex":0.00006538989,"about_ca_topic_score_gemma":0.000121971934,"teacher_disagreement_score":0.001482834,"about_ca_system_score_codex":0.000119706856,"about_ca_system_score_gemma":0.00015674648,"threshold_uncertainty_score":0.0049605966},"labels":[],"label_agreement":null},{"id":"W2557987245","doi":"10.1139/cjpp-2016-0303","title":"Chloroquine attenuates lipopolysaccharide-induced inflammatory responses through upregulation of USP25","year":2016,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"IRF3; TLR4; Downregulation and upregulation; TRIF; Cell biology; Signal transduction; Tumor necrosis factor alpha; Gene silencing; Lipopolysaccharide; Proinflammatory cytokine; Interferon regulatory factors; Chemistry; IκB kinase; NF-κB; Biology; Toll-like receptor; Receptor; Immunology; Inflammation; Biochemistry; Innate immune system","score_opus":0.016669957240469803,"score_gpt":0.2605634360440415,"score_spread":0.24389347880357168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2557987245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878323,0.0075251325,0.0024188298,0.00019747384,0.00006136889,0.00005821299,0.0002817869,0.00015586407,0.001469089],"genre_scores_gemma":[0.9956216,0.0017154131,0.0013069629,0.00007313056,0.000019657216,0.000029740224,0.00022857978,0.000014771773,0.0009901394],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999902,0.000025009396,0.000011576581,0.0000172791,0.000020423875,0.000023783658],"domain_scores_gemma":[0.99989617,0.000016502478,0.00003535693,0.000008942428,0.000017673668,0.000025360026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001671635,0.00034303352,0.000363842,0.00021221329,0.00013307568,0.00023308986,0.00016423149,0.00020164627,0.0011726225],"category_scores_gemma":[0.00014541596,0.000105132014,0.00025616807,0.00010159436,0.0003135435,0.00021571812,0.00013395069,0.0004009175,0.00016399394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056249567,0.000054564047,0.000118031225,0.00011437906,0.000009074376,0.00005263888,0.000015347843,0.000045220688,0.9972107,0.000069874186,0.00007941407,0.0016683497],"study_design_scores_gemma":[0.000101704856,0.0014290004,0.0041367505,0.000012000395,0.00005162977,0.00018712116,0.000028018625,0.0006478573,0.9904975,0.00004493413,0.0028557272,0.000007751141],"about_ca_topic_score_codex":0.0005664307,"about_ca_topic_score_gemma":0.0007706394,"teacher_disagreement_score":0.0011726225,"about_ca_system_score_codex":0.00019111487,"about_ca_system_score_gemma":0.0002211497,"threshold_uncertainty_score":0.00392282},"labels":[],"label_agreement":null},{"id":"W2560039482","doi":"10.1182/blood.v104.11.2167.2167","title":"Revising the Genomic Structure of the Human GM-CSF Receptor Alpha (GMRα) Subunit: Characterization of a Novel Membrane-Spanning GMRα Isoform Which Contains a Previously Undescribed Exon.","year":2004,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Exon; Alternative splicing; Biology; Molecular biology; Gene isoform; Alu element; RNA splicing; Gene; Cell biology; Genetics; Human genome; RNA; Genome","score_opus":0.01335511950904263,"score_gpt":0.2211947783076706,"score_spread":0.20783965879862795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560039482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873028,0.0023557628,0.007948804,0.00025580512,0.00010335214,0.00009589161,0.0010480066,0.000035286914,0.0008543834],"genre_scores_gemma":[0.9792213,0.0012423082,0.012526926,0.00029653817,0.00014365355,0.000054964854,0.0046932716,0.00004025992,0.0017807058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986863,0.000019347044,0.0000150887745,0.000041750896,0.000037071313,0.000018057744],"domain_scores_gemma":[0.99968207,0.00009828288,0.00008664489,0.000036696434,0.000043673408,0.00005270732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016453573,0.00027514293,0.00034823606,0.00023927336,0.00016058271,0.00044608527,0.0003132737,0.00047610473,0.00092801254],"category_scores_gemma":[0.00046662826,0.00021015703,0.0005558321,0.0001948512,0.00022651016,0.00016217782,0.0001634965,0.000575929,0.0014167582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000155356,0.000022292836,0.0012566692,0.00008236225,0.000010986546,0.0013260647,0.0000674513,0.00010664741,0.99419606,0.00015257011,0.000053679665,0.0025698508],"study_design_scores_gemma":[0.00019097925,0.0012945343,0.13971925,0.00026062105,0.0003760025,0.02548565,0.0004525368,0.0076277405,0.78284436,0.00084162597,0.040842727,0.00006398229],"about_ca_topic_score_codex":0.00030491606,"about_ca_topic_score_gemma":0.00045851368,"teacher_disagreement_score":0.00092801254,"about_ca_system_score_codex":0.000234327,"about_ca_system_score_gemma":0.00022430213,"threshold_uncertainty_score":0.003104508},"labels":[],"label_agreement":null},{"id":"W2560189532","doi":"10.1182/blood.v112.11.469.469","title":"The Zinc Finger Protein Gfi1 Controls TLR4-Mediated Inflammatory Response by Directly Antagonizing NF-κB Transcription Factor","year":2008,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Transcription factor; Cell biology; TLR4; Biology; Signal transduction; NF-κB; Innate immune system; NFKB1; Tumor necrosis factor alpha; Receptor; Immune system; Immunology; Gene; Biochemistry","score_opus":0.009527238851922358,"score_gpt":0.20076060450066266,"score_spread":0.1912333656487403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560189532","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9892378,0.0031590445,0.0042560096,0.00029504971,0.0000946128,0.000026811023,0.00076710555,0.00022832597,0.0019353313],"genre_scores_gemma":[0.99423087,0.0005692362,0.0019796176,0.00008743308,0.000018523187,0.000028064003,0.0004576718,0.000026515534,0.0026021793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998516,0.000015964837,0.0000065664435,0.00003575526,0.000030612915,0.000059450675],"domain_scores_gemma":[0.9998399,0.000014474409,0.000065481414,0.000011059129,0.0000135496175,0.000055502645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121219426,0.00037875702,0.00021529052,0.00022754289,0.00021045361,0.00021715296,0.0003646589,0.0002704861,0.0021432615],"category_scores_gemma":[0.00012675444,0.00011232158,0.00025625454,0.00010814213,0.00037418818,0.0001416467,0.0002823728,0.0005604855,0.0007070474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020740728,0.000018573164,0.00023785487,0.000035713103,0.0000030076187,0.000047212703,0.0000062755335,0.00004524831,0.998528,0.00008881471,0.000080390666,0.00070157857],"study_design_scores_gemma":[0.0000596906,0.00026430353,0.0085360715,0.000015021485,0.000016949618,0.00034881712,0.000051869836,0.0017823662,0.98384374,0.00014944348,0.0049222778,0.000009343114],"about_ca_topic_score_codex":0.00065323757,"about_ca_topic_score_gemma":0.00065782666,"teacher_disagreement_score":0.0021432615,"about_ca_system_score_codex":0.0005386313,"about_ca_system_score_gemma":0.00020242897,"threshold_uncertainty_score":0.0071699023},"labels":[],"label_agreement":null},{"id":"W2562421369","doi":"10.2147/ott.s106024","title":"Association between &lt;em&gt;TLR-9&lt;/em&gt; polymorphisms and colon cancer susceptibility in Saudi Arabian female patients","year":2016,"lang":"en","type":"article","venue":"OncoTargets and Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Medicine; Colorectal cancer; Internal medicine; Association (psychology); Cancer; Oncology; Psychology","score_opus":0.011239788867495772,"score_gpt":0.2406227111290439,"score_spread":0.22938292226154813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562421369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999448,0.00025709873,0.000050997118,0.000021467116,0.000002790067,0.0000017753866,0.00009952978,0.0000011145828,0.00011731658],"genre_scores_gemma":[0.9995509,0.0000907008,0.00007485638,0.000017760174,0.000005920106,0.0000021823844,0.000102285034,6.487814e-7,0.00015460716],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998795,0.00002771723,0.000014765811,0.000037321377,0.00001771948,0.000022971446],"domain_scores_gemma":[0.9996613,0.00005342754,0.00019993803,0.000018702676,0.000032047767,0.000034565488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019609924,0.00023241033,0.00017012755,0.00032055945,0.00021052426,0.00022223977,0.000117988595,0.0002499667,0.002125849],"category_scores_gemma":[0.00047100414,0.00012150725,0.00025187386,0.0003263032,0.00010832005,0.00009660703,0.00014881705,0.0001831314,0.00016287286],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044609056,0.000021201406,0.99445194,0.000026786705,0.00007557385,0.00018507503,0.000059023016,0.000045473775,0.002432423,0.00002207663,0.00006860516,0.002165694],"study_design_scores_gemma":[0.000015268912,0.00014327266,0.99766004,0.000010598902,0.000075826334,0.0009031868,0.00012694745,0.00024920536,0.000452437,0.000022096792,0.00033756916,0.0000036544109],"about_ca_topic_score_codex":0.0019057046,"about_ca_topic_score_gemma":0.0019398486,"teacher_disagreement_score":0.002125849,"about_ca_system_score_codex":0.000109512766,"about_ca_system_score_gemma":0.000101766476,"threshold_uncertainty_score":0.007111728},"labels":[],"label_agreement":null},{"id":"W2565686091","doi":"10.1016/s1525-0016(16)33991-0","title":"382. Osteopetrosis: An Unusual Presentation of a Rare Disease as a Candidate for Gene Therapy","year":2015,"lang":"en","type":"article","venue":"Molecular Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Osteopetrosis; TCIRG1; Medicine; Bone resorption; Osteoclast; Loss function; Pathology; Internal medicine; Pediatrics; Immunology; Phenotype; Genetics; Biology; Gene","score_opus":0.023622688052913742,"score_gpt":0.2912765444210489,"score_spread":0.26765385636813516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2565686091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7884554,0.017283516,0.009326519,0.00629722,0.0018094262,0.0004318976,0.0024202515,0.0014023005,0.17257346],"genre_scores_gemma":[0.9563511,0.0038368595,0.0032760063,0.0019052612,0.0017302164,0.000071882205,0.0010575734,0.00016125383,0.03160972],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9998227,0.000014061116,0.000014655772,0.000039538252,0.000041374537,0.00006770733],"domain_scores_gemma":[0.9997347,0.000042260912,0.00007917251,0.000015132359,0.000032281783,0.000096445285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008414122,0.0010808196,0.0006187043,0.00078934035,0.0007934867,0.0006744537,0.0005243134,0.0021447723,0.011395202],"category_scores_gemma":[0.0004788814,0.00024382563,0.00036191338,0.00057082495,0.0004468456,0.00056210044,0.00052325724,0.00086219446,0.005100469],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004885832,0.000026139782,0.0040664435,0.000046787914,0.0000051632305,0.9803201,0.000059829705,0.000042748004,0.005079076,0.0007112285,0.002342442,0.0072511104],"study_design_scores_gemma":[0.000008568084,0.000036248515,0.0025965504,0.000018317949,0.000008792023,0.98980683,0.000029895571,0.0000796896,0.0007038474,0.00019376923,0.0065119956,0.000005588486],"about_ca_topic_score_codex":0.001127435,"about_ca_topic_score_gemma":0.001151218,"teacher_disagreement_score":0.011395202,"about_ca_system_score_codex":0.00042456252,"about_ca_system_score_gemma":0.0003562618,"threshold_uncertainty_score":0.038120806},"labels":[],"label_agreement":null},{"id":"W2568285820","doi":"10.1371/journal.pone.0169154","title":"Characterization of Innate Responses Induced by PLGA Encapsulated- and Soluble TLR Ligands In Vitro and In Vivo in Chickens","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Agriculture and Agri-Food Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; Canadian Poultry Research Council","keywords":"Innate immune system; Lipopolysaccharide; In vivo; Cytokine; TLR4; Adjuvant; Toll-like receptor; In vitro; PLGA; Splenocyte; Chemistry; Immune system; Immunology; Biology; Pharmacology; Biochemistry","score_opus":0.022887488421451767,"score_gpt":0.2267714994272292,"score_spread":0.20388401100577744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2568285820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961146,0.0010878368,0.0020804727,0.00003397153,0.000012389415,0.0000330242,0.00021107018,0.000023383454,0.0004032671],"genre_scores_gemma":[0.99364144,0.0008963801,0.0029937197,0.00005356449,0.0000075655953,0.00008467851,0.00037620557,0.000017611183,0.0019288351],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986005,0.0000209838,0.00001560672,0.000049238086,0.000025287576,0.000028857845],"domain_scores_gemma":[0.9998196,0.00004900136,0.00006151748,0.000014130626,0.00002565301,0.000030136336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019996539,0.0003382123,0.00018268771,0.00018678755,0.0000776488,0.00020719465,0.00014105528,0.0003084854,0.0003683208],"category_scores_gemma":[0.00015833639,0.00016917137,0.00022881583,0.000060447408,0.00018290296,0.00019281344,0.00010498824,0.00038535672,0.0001850658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064138556,0.000009492513,0.00014000229,0.000023893184,0.000001447578,0.000019003981,0.000014878264,0.000037450136,0.99945945,0.0000060610114,0.0000026844862,0.00022157695],"study_design_scores_gemma":[0.000010130099,0.0010079085,0.004128139,0.000008950855,0.000020215779,0.00010234727,0.000049535633,0.00044615075,0.9937186,0.000014629724,0.00048683456,0.000006441184],"about_ca_topic_score_codex":0.00062254164,"about_ca_topic_score_gemma":0.0007673088,"teacher_disagreement_score":0.00062254164,"about_ca_system_score_codex":0.00020768894,"about_ca_system_score_gemma":0.00010930202,"threshold_uncertainty_score":0.0015069246},"labels":[],"label_agreement":null},{"id":"W2578600399","doi":"","title":"Rosiglitazone prevents stretch-induced monocytes recruitment by inhibiting the NFkB-MCP1 pathway in human mesangial cells.","year":2003,"lang":"en","type":"article","venue":"Research Portal (King's College London)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Rosiglitazone; Mesangial cell; Cell biology; Cancer research; Macrophage; Chemistry; Monocyte; Internal medicine; Medicine; Biology; Receptor; In vitro; Kidney; Biochemistry","score_opus":0.06377815008855285,"score_gpt":0.3334916012336715,"score_spread":0.26971345114511863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2578600399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9904185,0.005199574,0.00092973205,0.0004449427,0.00017076553,0.00004565769,0.0008905026,0.00020321812,0.0016971334],"genre_scores_gemma":[0.9893911,0.0038027046,0.0008526155,0.000107443055,0.00005140294,0.00008205296,0.0008326554,0.0000193716,0.0048606684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998766,0.000017166054,0.000011809304,0.000015227832,0.000025404966,0.000053771593],"domain_scores_gemma":[0.9999076,0.000018637444,0.000023273598,0.000018565474,0.0000051887055,0.00002674466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012733835,0.00030085148,0.00028763126,0.00023010181,0.00023248458,0.00032463172,0.00026085833,0.00038169872,0.0027731103],"category_scores_gemma":[0.00012915654,0.00017561928,0.00026324132,0.00022179757,0.00019746818,0.00018296925,0.0001567541,0.0011280086,0.00073148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037778902,0.0005143863,0.0005612672,0.00021818695,0.000028388733,0.00022160917,0.0000634173,0.00015691874,0.9832077,0.00019029679,0.00091398845,0.010146007],"study_design_scores_gemma":[0.0010643883,0.0042701075,0.020633629,0.00003748241,0.0000920365,0.0005063666,0.00020590724,0.001017646,0.96004313,0.0002315583,0.011877298,0.000020590676],"about_ca_topic_score_codex":0.0014962814,"about_ca_topic_score_gemma":0.0035824191,"teacher_disagreement_score":0.0027731103,"about_ca_system_score_codex":0.00017647687,"about_ca_system_score_gemma":0.00042707863,"threshold_uncertainty_score":0.009276986},"labels":[],"label_agreement":null},{"id":"W2586120920","doi":"10.2147/ott.s111971","title":"Two SNPs in the promoter region of Toll-like receptor 4 gene are not associated with smoking in Saudi Arabia","year":2017,"lang":"en","type":"article","venue":"OncoTargets and Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Single-nucleotide polymorphism; Genotype; TLR4; Saliva; Gene; SNP; Polymerase chain reaction; Biology; Polymorphism (computer science); Toll-like receptor; Population; Genetics; Immunology; Receptor; Medicine; Innate immune system; Internal medicine; Environmental health","score_opus":0.023291453695013554,"score_gpt":0.25611847112623537,"score_spread":0.2328270174312218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586120920","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99973863,0.00007231429,0.00006404345,0.000018813285,0.0000017096014,0.0000012800501,0.000026494119,7.822058e-7,0.00007593607],"genre_scores_gemma":[0.9996984,0.000062998246,0.00007693961,0.000019710396,0.0000027769313,0.0000012768421,0.000054873002,9.4495016e-7,0.00008215579],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997478,0.000067568675,0.000047741094,0.000057428304,0.000046516,0.00003295787],"domain_scores_gemma":[0.9995753,0.0001031185,0.00017567599,0.00003699645,0.0000642464,0.000044747867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039424587,0.0002176021,0.00022879729,0.0003560255,0.00027089365,0.00033668434,0.00022250776,0.00028003924,0.0013465072],"category_scores_gemma":[0.0007064493,0.00015217386,0.00029518726,0.00037802386,0.00022316856,0.00012461617,0.00020629851,0.0002032951,0.00015053597],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086020137,0.000084894455,0.9737191,0.00004133434,0.00016941696,0.0005448856,0.0006150802,0.000109039276,0.015605943,0.000119944816,0.000104889354,0.008025123],"study_design_scores_gemma":[0.00005625726,0.00034748335,0.9921749,0.000023478056,0.00019980305,0.002153505,0.00080942386,0.0008205561,0.002523053,0.00010680946,0.00077325676,0.000011425596],"about_ca_topic_score_codex":0.004147018,"about_ca_topic_score_gemma":0.0030333975,"teacher_disagreement_score":0.004147018,"about_ca_system_score_codex":0.00016931079,"about_ca_system_score_gemma":0.0002728946,"threshold_uncertainty_score":0.008245766},"labels":[],"label_agreement":null},{"id":"W2586225063","doi":"10.1007/s10495-017-1348-4","title":"Surfactant protein D delays Fas- and TRAIL-mediated extrinsic pathway of apoptosis in T cells","year":2017,"lang":"en","type":"article","venue":"APOPTOSIS","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University Health Network; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Cystic Fibrosis Canada","keywords":"Jurkat cells; Apoptosis; Fas ligand; Cell biology; Inhibitor of apoptosis domain; Fas receptor; Phosphatidylserine; Intrinsic apoptosis; Caspase; Biology; Programmed cell death; Immune system; Receptor; T cell; Immunology; Biochemistry","score_opus":0.013089962848419042,"score_gpt":0.21957108801201056,"score_spread":0.20648112516359152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586225063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909231,0.0038216528,0.0025495524,0.00034356126,0.00015847247,0.000047765785,0.00023458019,0.000107118365,0.001814083],"genre_scores_gemma":[0.99555665,0.0008278948,0.00088043965,0.000072370276,0.00003117666,0.000029446503,0.00025155063,0.000010095435,0.0023403736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954754,0.00012289708,0.000062199644,0.000041703828,0.00007487506,0.00015083217],"domain_scores_gemma":[0.99971896,0.00005193283,0.00005337928,0.000047692072,0.00005162608,0.00007637964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035311191,0.00040701634,0.00040249384,0.0003371993,0.00028023368,0.0004901446,0.00024908857,0.00042110318,0.0018600471],"category_scores_gemma":[0.0004069682,0.0001538727,0.0003465072,0.0002000501,0.00038006474,0.00042507035,0.00035071315,0.0013146983,0.00048074406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003338275,0.00021269398,0.00068501424,0.00016166359,0.000029100127,0.00014121314,0.00006468255,0.00014715231,0.98601204,0.00056498643,0.00032055916,0.008322586],"study_design_scores_gemma":[0.0002817744,0.0014923881,0.003936496,0.00002258616,0.000060059756,0.00034252674,0.00011239702,0.0009975728,0.9874306,0.00028831323,0.00502697,0.0000082889455],"about_ca_topic_score_codex":0.0006726983,"about_ca_topic_score_gemma":0.0015322587,"teacher_disagreement_score":0.0018600471,"about_ca_system_score_codex":0.0005208719,"about_ca_system_score_gemma":0.001002831,"threshold_uncertainty_score":0.0062224865},"labels":[],"label_agreement":null},{"id":"W2586528952","doi":"10.1016/j.cyto.2017.01.017","title":"Type I interferon signalling is not required for the induction of endotoxin tolerance","year":2017,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Health Canada; Canada Research Chairs","keywords":"Interferon; Lipopolysaccharide; TLR4; Cytokine; Biology; Immunology; Sepsis; Wild type; Function (biology); Immune system; Microbiology; Cell biology; Biochemistry; Gene","score_opus":0.04608572980879512,"score_gpt":0.29041044328425175,"score_spread":0.24432471347545665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586528952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99040025,0.0021787826,0.0031244461,0.00034982228,0.00019430614,0.000019844701,0.00063271966,0.00012588024,0.0029739144],"genre_scores_gemma":[0.9961444,0.00031199784,0.0010956469,0.00015229128,0.000019170762,0.00001617001,0.0006723852,0.00004297138,0.0015449676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994041,0.00011583596,0.0000571902,0.000079543825,0.00016054859,0.00018273639],"domain_scores_gemma":[0.9991379,0.00015479479,0.00023050501,0.000208549,0.00007215155,0.00019604858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040273796,0.00033166067,0.00049480295,0.0003452555,0.0002585748,0.0008096645,0.00035757112,0.000690301,0.002766738],"category_scores_gemma":[0.00066501746,0.00023115685,0.0004545132,0.00019175006,0.00044405306,0.0006455914,0.0003875757,0.0014496013,0.0011894335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049515866,0.000026743886,0.00058963837,0.000030242403,0.0000069595344,0.00014144291,0.000010765905,0.00003628337,0.9969175,0.00029305948,0.00007742254,0.0013746369],"study_design_scores_gemma":[0.00008956786,0.00042438525,0.034641724,0.000060648243,0.00004843644,0.0020101876,0.0001345884,0.0014058874,0.95554423,0.001067116,0.0045502433,0.0000230768],"about_ca_topic_score_codex":0.00017428507,"about_ca_topic_score_gemma":0.0003512053,"teacher_disagreement_score":0.002766738,"about_ca_system_score_codex":0.00043659465,"about_ca_system_score_gemma":0.0003984673,"threshold_uncertainty_score":0.009255648},"labels":[],"label_agreement":null},{"id":"W2587329107","doi":"10.1177/0960327116685889","title":"Concomitant effect of low dose of lindane and intranasal lipopolysaccharide on respiratory system of mice","year":2017,"lang":"en","type":"article","venue":"Human & Experimental Toxicology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Department of Science and Technology, Ministry of Science and Technology, India","keywords":"Lindane; Lipopolysaccharide; Respiratory system; Saline; Pharmacology; Inhalation; Inflammation; Tumor necrosis factor alpha; Toxicity; Lung; Medicine; Chemistry; Immunology; Internal medicine; Biology; Pesticide; Anesthesia","score_opus":0.016400953004712504,"score_gpt":0.2972404098109635,"score_spread":0.280839456806251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587329107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99033326,0.0038568298,0.0018364468,0.0004916637,0.00016265013,0.00016050274,0.0012985178,0.00016393066,0.0016960982],"genre_scores_gemma":[0.9829296,0.0032429218,0.0033290056,0.0005129922,0.0000756416,0.000383246,0.0013743193,0.00003499192,0.008117292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995691,0.00006747501,0.00003465412,0.000118378426,0.000090561734,0.00011982719],"domain_scores_gemma":[0.999579,0.00004408647,0.00010750938,0.000036495683,0.000048253107,0.00018464842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028250125,0.00075217744,0.00062290096,0.0007864618,0.00026418344,0.00038003322,0.00039193398,0.0008383016,0.0016949374],"category_scores_gemma":[0.00022861411,0.00032988406,0.0006048774,0.00024162712,0.000435534,0.00037788175,0.0003653188,0.0017308976,0.0004487273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024563225,0.0009186238,0.0008260529,0.00014105668,0.000024100997,0.00018975024,0.000079188736,0.00018762457,0.9929142,0.0000825791,0.00014394415,0.0020365668],"study_design_scores_gemma":[0.0002787706,0.02367497,0.012483902,0.00006169312,0.00012726332,0.0004696007,0.00023134315,0.0010004768,0.9578193,0.0002485574,0.0035600588,0.000044064444],"about_ca_topic_score_codex":0.0008055484,"about_ca_topic_score_gemma":0.0014861391,"teacher_disagreement_score":0.0016949374,"about_ca_system_score_codex":0.0003589638,"about_ca_system_score_gemma":0.0005077179,"threshold_uncertainty_score":0.00567019},"labels":[],"label_agreement":null},{"id":"W2590714162","doi":"10.1038/ncomms14811","title":"The comparative immunology of wild and laboratory mice, Mus musculus domesticus","year":2017,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":292,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre for Ecology and Hydrology; University of Bristol; McGill University; National Centre for the Replacement, Refinement and Reduction of Animals in Research; Natural Environment Research Council; Sight Research UK","keywords":"Immune system; Biology; Immunology; Laboratory mouse; Population; Antigen; Cytokine; Cell biology; Genetics; Medicine; Gene","score_opus":0.015197741217744509,"score_gpt":0.3056367750129647,"score_spread":0.2904390337952202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590714162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99277216,0.0014095092,0.002686797,0.000122059246,0.000037605623,0.00003256675,0.0010576084,0.0000701942,0.0018114178],"genre_scores_gemma":[0.9854649,0.00085385155,0.007878321,0.00031273352,0.000043494983,0.00015227089,0.0026040184,0.00006756903,0.0026229334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995468,0.00012738854,0.000054896558,0.0001384369,0.00006706806,0.000065353124],"domain_scores_gemma":[0.999597,0.000040160066,0.0001280102,0.000084823354,0.000029219631,0.00012080378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005211415,0.0004453791,0.0001806746,0.001255717,0.00029518697,0.0004456666,0.00031828677,0.00039743318,0.001226372],"category_scores_gemma":[0.00028131114,0.00019458814,0.00025552238,0.00027673302,0.0005560865,0.00047864844,0.00040625696,0.0005534316,0.00041777213],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051391084,0.0002101719,0.008237381,0.000055884782,0.000029677129,0.00009192761,0.00010855753,0.000048637565,0.98487663,0.0007952266,0.00016924982,0.0048627546],"study_design_scores_gemma":[0.00012617775,0.006636367,0.41209573,0.000083873616,0.0002450452,0.0053696954,0.0007017072,0.0010465607,0.5544724,0.0016509807,0.017510174,0.000061379345],"about_ca_topic_score_codex":0.00022912148,"about_ca_topic_score_gemma":0.0005300935,"teacher_disagreement_score":0.001255717,"about_ca_system_score_codex":0.00027308878,"about_ca_system_score_gemma":0.00013804135,"threshold_uncertainty_score":0.0041025877},"labels":[],"label_agreement":null},{"id":"W2591423018","doi":"10.1016/j.nbd.2017.02.002","title":"Laquinimod enhances central nervous system barrier functions","year":2017,"lang":"en","type":"article","venue":"Neurobiology of Disease","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft; Teva Pharmaceutical Industries","keywords":"ALCAM; Experimental autoimmune encephalomyelitis; Multiple sclerosis; Blood–brain barrier; Central nervous system; Cell adhesion molecule; Neuroinflammation; Myelin; Chemokine; Effector; Cell biology; Immunology; Biology; Inflammation; Neuroscience","score_opus":0.008994402876913957,"score_gpt":0.22764298711751488,"score_spread":0.2186485842406009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591423018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9875881,0.0029990762,0.0018649119,0.0009494429,0.00060248823,0.0001326635,0.0008960908,0.000485443,0.0044817813],"genre_scores_gemma":[0.9919526,0.0014909719,0.001240823,0.00024384915,0.0001487042,0.00012429962,0.00045818667,0.000046439538,0.0042939866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997788,0.00005956677,0.000020839032,0.00003987516,0.000022751014,0.0000781986],"domain_scores_gemma":[0.99971217,0.00007174032,0.000042656855,0.0000363572,0.000040580242,0.000096421965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036018086,0.0005792378,0.0007975461,0.00032216366,0.00033223632,0.00062323856,0.0005897223,0.0008063152,0.00642749],"category_scores_gemma":[0.00043717102,0.0002310621,0.00041129155,0.00013140793,0.0007150147,0.00080025475,0.00020687607,0.0016793398,0.00084174634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010521286,0.0011137975,0.00033899068,0.00034665866,0.00008693291,0.00021070683,0.0001276659,0.00022364181,0.9742072,0.000735315,0.0015459538,0.01054171],"study_design_scores_gemma":[0.0035419762,0.024945835,0.009264035,0.00009197733,0.0003227718,0.00064550975,0.00039492085,0.0020426505,0.94451,0.0007082263,0.013438768,0.00009322319],"about_ca_topic_score_codex":0.001236498,"about_ca_topic_score_gemma":0.0021277547,"teacher_disagreement_score":0.00642749,"about_ca_system_score_codex":0.00039014037,"about_ca_system_score_gemma":0.0005694719,"threshold_uncertainty_score":0.021502137},"labels":[],"label_agreement":null},{"id":"W2592172886","doi":"10.2147/ott.s112165","title":"Toll-like receptor-4 as a predictor of clinical outcomes of estrogen receptor-negative breast cancer in Saudi women","year":2017,"lang":"en","type":"article","venue":"OncoTargets and Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Breast cancer; Medicine; Estrogen receptor; Toll-like receptor; Oncology; Receptor; Internal medicine; Estrogen; Cancer; Innate immune system","score_opus":0.019198467815052953,"score_gpt":0.32422625563115176,"score_spread":0.3050277878160988,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592172886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99944,0.00032333864,0.000025214717,0.000026136024,0.000004270423,0.000001690862,0.000096709526,6.5840624e-7,0.000081939594],"genre_scores_gemma":[0.9996302,0.00010731052,0.00003386476,0.000013145747,0.0000051836555,0.000001711176,0.00012140538,4.483905e-7,0.00008678991],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984264,0.000048401165,0.00002282157,0.00002897175,0.00003273844,0.00002443995],"domain_scores_gemma":[0.99940896,0.00011239205,0.00026546212,0.00003275818,0.000101277124,0.0000792146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035625565,0.0002239709,0.00019666359,0.00043068576,0.00018057125,0.00028566553,0.00019477858,0.0002716315,0.0013601519],"category_scores_gemma":[0.0008636753,0.00010369489,0.00028366313,0.0004427987,0.00011717314,0.00012526798,0.0002294273,0.00023823419,0.000162197],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023089371,0.000013064249,0.99776065,0.000013718297,0.000042650878,0.000049849383,0.0000265078,0.000024163264,0.0006126221,0.000006823392,0.000036859266,0.0011821769],"study_design_scores_gemma":[0.0000142737745,0.00012140139,0.9984189,0.000009713458,0.00007266692,0.00039039602,0.00015053074,0.00031264135,0.000272352,0.000021094065,0.00021278788,0.0000031912548],"about_ca_topic_score_codex":0.0025461246,"about_ca_topic_score_gemma":0.0023636466,"teacher_disagreement_score":0.0025461246,"about_ca_system_score_codex":0.00016419172,"about_ca_system_score_gemma":0.00021133435,"threshold_uncertainty_score":0.0050626397},"labels":[],"label_agreement":null},{"id":"W2592644749","doi":"10.1097/pcc.0000000000001048","title":"Specific Etiologies Associated With the Multiple Organ Dysfunction Syndrome in Children: Part 1","year":2017,"lang":"en","type":"review","venue":"Pediatric Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Medicine; Organ dysfunction; Multiple organ dysfunction syndrome; Intensive care medicine; Sepsis; Disease; MEDLINE; Bioinformatics; Pathology; Immunology","score_opus":0.0486258381713306,"score_gpt":0.3141417185248398,"score_spread":0.2655158803535092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2592644749","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023837677,0.9973748,0.00021341053,0.00054752483,0.00024942964,0.000024687693,0.00007386441,0.000006617044,0.0012712827],"genre_scores_gemma":[0.0029948924,0.9949852,0.00050506525,0.00041491567,0.0005753797,0.000036472156,0.000109743625,0.0000022475747,0.00037606806],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.99929273,0.00016556398,0.00019198486,0.00010189386,0.00018065727,0.0000669963],"domain_scores_gemma":[0.99875605,0.00053462735,0.0004351728,0.00002316217,0.0001874488,0.000063607324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008271013,0.0011714173,0.0012956058,0.0042662425,0.00039802634,0.0010640281,0.0007934315,0.0012321151,0.0035994772],"category_scores_gemma":[0.0023787278,0.00024767383,0.0007795317,0.0031378157,0.00077596796,0.0013116567,0.0009473496,0.0012890581,0.001010894],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001263778,0.00007114115,0.0054754443,0.10567732,0.0002577556,0.0030817445,0.00034115365,0.00035420834,0.0011759641,0.0066290996,0.052192032,0.82461786],"study_design_scores_gemma":[0.00003625263,0.00015260222,0.021249896,0.11302903,0.0006665696,0.048473686,0.00074861106,0.0001942553,0.0010458706,0.004526783,0.8097984,0.00007794768],"about_ca_topic_score_codex":0.0015341114,"about_ca_topic_score_gemma":0.0022973751,"teacher_disagreement_score":0.0042662425,"about_ca_system_score_codex":0.00074716343,"about_ca_system_score_gemma":0.002283621,"threshold_uncertainty_score":0.01204139},"labels":[],"label_agreement":null},{"id":"W2594458751","doi":"10.1016/j.imlet.2017.02.015","title":"MiR-146a potentially promotes IVIg-mediated inhibition of TLR4 signaling in LPS-activated human monocytes","year":2017,"lang":"en","type":"article","venue":"Immunology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Héma-Québec","funders":"","keywords":"IRF3; TLR4; Sepsis; Immunology; Monocyte; Inflammation; Lipopolysaccharide; microRNA; Medicine; Signal transduction; Receptor; Downregulation and upregulation; Chemistry; Biology; Innate immune system; Cell biology; Gene; Immune system; Internal medicine","score_opus":0.014548431080350406,"score_gpt":0.24695779243963656,"score_spread":0.23240936135928617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594458751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97962016,0.007351632,0.004997136,0.00047109937,0.0003981825,0.000088758585,0.0008023944,0.00034579902,0.0059247916],"genre_scores_gemma":[0.99328434,0.0011496377,0.0021214557,0.00022830626,0.00004733899,0.00007082709,0.0005654812,0.00003882774,0.0024937985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997124,0.000066290406,0.000031376025,0.000057316684,0.00006141722,0.000071302115],"domain_scores_gemma":[0.99990666,0.000021240625,0.00002704382,0.000013288736,0.000013106877,0.000018603898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026257982,0.00040470346,0.00045061854,0.00022499182,0.00024902658,0.0006273629,0.00017978545,0.00032390893,0.0021518213],"category_scores_gemma":[0.0002968512,0.0002459098,0.0004251998,0.00011603613,0.0002726109,0.00013600131,0.00024175039,0.00085652154,0.00075221655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010168736,0.000074808,0.0005445799,0.00013216799,0.000029566248,0.00012933086,0.00002969652,0.00009174841,0.99241465,0.0002353212,0.00032778003,0.004973459],"study_design_scores_gemma":[0.00018979146,0.0007137324,0.010208887,0.000019052128,0.00012670527,0.0005269882,0.00007057418,0.0014747963,0.97567344,0.00016844654,0.010816345,0.000011275425],"about_ca_topic_score_codex":0.0004175338,"about_ca_topic_score_gemma":0.00072604907,"teacher_disagreement_score":0.0021518213,"about_ca_system_score_codex":0.00023353653,"about_ca_system_score_gemma":0.00034811822,"threshold_uncertainty_score":0.007198572},"labels":[],"label_agreement":null},{"id":"W2595432088","doi":"10.71781/29640","title":"Étude de la fonction de l'interleukine-21 dans le système immunitaire","year":2003,"lang":"fr","type":"dissertation","venue":"Papyrus : Institutional Repository (Université de Montréal)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Humanities; Philosophy","score_opus":0.0028557850672649965,"score_gpt":0.17039262938471628,"score_spread":0.16753684431745128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2595432088","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92898804,0.054353587,0.004758695,0.0010234565,0.00030593996,0.00008387505,0.00055787456,0.000048800535,0.009879551],"genre_scores_gemma":[0.9675385,0.0139336875,0.0032423036,0.0001575818,0.00012572782,0.00008869524,0.00038590172,0.000017623106,0.014509899],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977046,0.000052899068,0.000012338611,0.000044786408,0.00006903196,0.000050493683],"domain_scores_gemma":[0.9997397,0.00011713681,0.00002356861,0.000014196018,0.00007704669,0.000028315795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071679876,0.0002849523,0.0003106709,0.0004884541,0.00035354088,0.0009085248,0.00025298723,0.00042472285,0.0017087847],"category_scores_gemma":[0.00062431017,0.00017451138,0.0004158276,0.00030317335,0.00042268215,0.0003477174,0.00018395622,0.0006696918,0.00033460127],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020247851,0.00022512583,0.015831819,0.0002984023,0.000100211,0.0018150846,0.000565495,0.0005633083,0.87787884,0.0019093093,0.0008956356,0.09789189],"study_design_scores_gemma":[0.00025046716,0.0023166162,0.21075566,0.00012274313,0.0003108873,0.005312022,0.0006860356,0.0021259428,0.7291049,0.0012008238,0.047756217,0.00005772992],"about_ca_topic_score_codex":0.007001683,"about_ca_topic_score_gemma":0.005437323,"teacher_disagreement_score":0.007001683,"about_ca_system_score_codex":0.0007049734,"about_ca_system_score_gemma":0.00064577634,"threshold_uncertainty_score":0.0139219165},"labels":[],"label_agreement":null},{"id":"W2600139037","doi":"","title":"Infiltration Of Rorγt+ Lineage Negative Lymphocytes Into The Lung During Lipopolysaacharide-Induced Acute Lung Injury","year":2012,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lung; Infiltration (HVAC); Lineage (genetic); Medicine; Pathology; Immunology; Biology; Internal medicine; Genetics; Gene; Physics","score_opus":0.012655506215946558,"score_gpt":0.280210774786459,"score_spread":0.26755526857051243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2600139037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945251,0.001387335,0.0011488842,0.0001594099,0.00009183704,0.000056027504,0.00020980532,0.00009728849,0.002324253],"genre_scores_gemma":[0.9940103,0.00053655513,0.0007114861,0.00012789552,0.000059223876,0.000082768005,0.00022009901,0.000018218323,0.0042333025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996611,0.00006513347,0.000041000498,0.000049907572,0.000064422056,0.000118368436],"domain_scores_gemma":[0.99973685,0.00003999196,0.00007240994,0.000039259947,0.000028286026,0.00008323213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038616703,0.00047712153,0.00039516794,0.00056042115,0.00034633616,0.00047794063,0.00018133249,0.000836066,0.002864924],"category_scores_gemma":[0.00021327133,0.00030886,0.00034340852,0.00020583856,0.00041854984,0.00047725774,0.00026766572,0.0010749528,0.0009481107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002451096,0.00024503618,0.0010185625,0.00015067776,0.000014510127,0.001379147,0.00020637816,0.00012241385,0.99112415,0.0002221945,0.00016682628,0.0028990505],"study_design_scores_gemma":[0.00040303965,0.0057149855,0.065674715,0.00008763629,0.0001328957,0.0052180816,0.0011104482,0.002025292,0.9148819,0.00055400986,0.0041596224,0.000037370803],"about_ca_topic_score_codex":0.0003217321,"about_ca_topic_score_gemma":0.0004076648,"teacher_disagreement_score":0.002864924,"about_ca_system_score_codex":0.00029607708,"about_ca_system_score_gemma":0.00022873077,"threshold_uncertainty_score":0.009584129},"labels":[],"label_agreement":null},{"id":"W2603204315","doi":"10.1155/2017/7353252","title":"All-Trans Retinoic Acid Modulates TLR4/NF-<i>κ</i>B Signaling Pathway Targeting TNF-<i>α</i>and Nitric Oxide Synthase 2 Expression in Colonic Mucosa during Ulcerative Colitis and Colitis Associated Cancer","year":2017,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agence Thématique de Recherche en Sciences de la Santé; Agence Universitaire de la Francophonie","keywords":"Colitis; Retinoic acid; Tumor necrosis factor alpha; TLR4; Cancer research; NF-κB; Ulcerative colitis; Signal transduction; Nitric oxide synthase; Inflammatory bowel disease; Medicine; Immunology; Biology; Nitric oxide; Inflammation; Internal medicine; Biochemistry; Disease","score_opus":0.007483751435285026,"score_gpt":0.2314779822305915,"score_spread":0.22399423079530648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2603204315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915366,0.0053344625,0.0017367264,0.00014339804,0.000049439404,0.000023482538,0.00018291455,0.00003108713,0.0009618374],"genre_scores_gemma":[0.99339336,0.0024826152,0.0018530854,0.000095722186,0.00002086125,0.000051199422,0.00022410981,0.000007730052,0.001871326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998534,0.00003893935,0.000016208236,0.00002626219,0.000023734829,0.000041440013],"domain_scores_gemma":[0.99991167,0.000009665642,0.0000336834,0.0000097147695,0.000013295927,0.000021882968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014439791,0.00019924258,0.00023891524,0.00017758741,0.00011714175,0.00019101868,0.00010480639,0.00026330331,0.000922395],"category_scores_gemma":[0.00010744174,0.00012129747,0.00032471248,0.00013090641,0.00020837365,0.0002209107,0.00012365678,0.00063200196,0.0002206194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004528475,0.00002708262,0.0002784024,0.00005791494,0.000005056576,0.000040129824,0.000015318179,0.000028876682,0.9982596,0.000016905546,0.00001744706,0.00080046034],"study_design_scores_gemma":[0.00005192971,0.0015026781,0.015365809,0.000019573812,0.000048446575,0.00036828365,0.00018169174,0.0006381548,0.9792342,0.00007406118,0.0025072598,0.000007851348],"about_ca_topic_score_codex":0.0002236299,"about_ca_topic_score_gemma":0.00042201296,"teacher_disagreement_score":0.000922395,"about_ca_system_score_codex":0.00012676652,"about_ca_system_score_gemma":0.00015067068,"threshold_uncertainty_score":0.0030856729},"labels":[],"label_agreement":null},{"id":"W2604296355","doi":"10.1021/acs.analchem.6b04799","title":"Detection of the Lipopeptide Pam3CSK4 Using a Hybridized Toll-like Receptor Electrochemical Sensor","year":2017,"lang":"en","type":"article","venue":"Analytical Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; Royal Military College of Canada; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipopeptide; Chemistry; Analyte; Detection limit; Electrochemistry; Innate immune system; Electrochemical gas sensor; TLR2; In vivo; Nanotechnology; Receptor; Combinatorial chemistry; Biophysics; Chromatography; Electrode; Materials science; Biochemistry; Bacteria; Biology","score_opus":0.012608305177116029,"score_gpt":0.247776074561242,"score_spread":0.23516776938412598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604296355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9078674,0.0020166922,0.0868654,0.00024557573,0.00012362227,0.00010379684,0.00045431388,0.0004187711,0.0019044436],"genre_scores_gemma":[0.8979173,0.0014747356,0.096786804,0.00024102538,0.000032271142,0.00017738536,0.0003691821,0.000023294006,0.0029780748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994925,0.000115112634,0.000030306093,0.00014422697,0.00016313346,0.00005478521],"domain_scores_gemma":[0.99982196,0.00005257733,0.00003593202,0.00001526473,0.000052194944,0.00002213699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003832403,0.0005698538,0.00046248498,0.00039614618,0.00018008775,0.00033096137,0.00066093705,0.0009457358,0.00072939484],"category_scores_gemma":[0.00049256487,0.00028485205,0.00024612207,0.00035221624,0.00028133206,0.00034549786,0.00046757644,0.00057042553,0.00046724096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022965163,0.0000092927485,0.00008411796,0.00003207232,0.0000063208195,0.000025162692,0.000006590249,0.000075930926,0.99887997,0.000027510643,0.000019639738,0.00081043865],"study_design_scores_gemma":[0.000004051093,0.00009339604,0.00047783784,0.0000030608664,0.000010275842,0.00012130063,0.000014870195,0.0018818468,0.9970054,0.000023125851,0.0003583112,0.0000066058496],"about_ca_topic_score_codex":0.000229895,"about_ca_topic_score_gemma":0.00042970647,"teacher_disagreement_score":0.0009457358,"about_ca_system_score_codex":0.0002777411,"about_ca_system_score_gemma":0.00018801636,"threshold_uncertainty_score":0.0024400353},"labels":[],"label_agreement":null},{"id":"W2604753011","doi":"10.1038/ncomms14805","title":"Constitutive smooth muscle tumour necrosis factor regulates microvascular myogenic responsiveness and systemic blood pressure","year":2017,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; St. Michael's Hospital; University of Toronto; University Health Network; Canada Research Chairs; York University","funders":"Canadian Institutes of Health Research; University of Toronto; Russian Science Foundation; Canadian Stroke Network; Heart and Stroke Foundation of Canada","keywords":"Tumor necrosis factor alpha; Myogenic contraction; Vasoconstriction; Cytokine; Biology; Cell biology; Medicine; Internal medicine; Endocrinology; Smooth muscle","score_opus":0.01331089385442895,"score_gpt":0.2602064101438004,"score_spread":0.24689551628937145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604753011","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99599326,0.001365403,0.0016732097,0.0000793722,0.000019171619,0.0000059322583,0.00003672639,0.000031325402,0.00079562544],"genre_scores_gemma":[0.99843127,0.00047802017,0.0005479765,0.000021340395,0.000010600523,0.000006651793,0.000030736526,0.0000041471994,0.0004693338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986804,0.000033679422,0.0000070655915,0.00002635727,0.000025911197,0.000039072576],"domain_scores_gemma":[0.99985564,0.000023372946,0.00005351468,0.000016427977,0.000013167083,0.000037922156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012026566,0.0001102215,0.00014995004,0.00009687806,0.000089339876,0.00026324007,0.00008716646,0.00016582946,0.0006602011],"category_scores_gemma":[0.00016492621,0.000070815506,0.00010546979,0.000065145476,0.00029431132,0.00016195189,0.00018010354,0.00041944196,0.00017696689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012881542,0.000009902288,0.0002936192,0.000010668644,9.317037e-7,0.000038083217,0.000010892351,0.0000192669,0.99849105,0.000068111425,0.000013961336,0.00091460225],"study_design_scores_gemma":[0.00004244852,0.0008993781,0.03564242,0.000014927842,0.000022391741,0.00069651264,0.000118519885,0.0013429038,0.9585265,0.00037461918,0.0023119352,0.0000075029625],"about_ca_topic_score_codex":0.00012879902,"about_ca_topic_score_gemma":0.00017954715,"teacher_disagreement_score":0.0006602011,"about_ca_system_score_codex":0.00013444822,"about_ca_system_score_gemma":0.00009120871,"threshold_uncertainty_score":0.00220865},"labels":[],"label_agreement":null},{"id":"W2604801981","doi":"10.71781/32192","title":"Investigating the thymopoiesis stimulating property of interleukin-21 in aging mice","year":2016,"lang":"en","type":"dissertation","venue":"Open MIND","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Cancer Research Society","keywords":"Interleukin 1β; Interleukin; Immunology; Medicine; Cytokine","score_opus":0.027386176157736416,"score_gpt":0.298271357385101,"score_spread":0.2708851812273646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604801981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932637,0.0024229868,0.0023145177,0.00006568941,0.000052152664,0.00003667922,0.00032429627,0.000047227208,0.0014727145],"genre_scores_gemma":[0.9881115,0.0021361134,0.0033810036,0.000117559204,0.00004338836,0.00012757315,0.0005217981,0.000027051614,0.0055341586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998865,0.000016444126,0.000009104272,0.00002991962,0.00002210846,0.000035973633],"domain_scores_gemma":[0.9998227,0.00004184113,0.000043101023,0.000019222294,0.000024858704,0.000048178044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019965963,0.00029757406,0.00018872654,0.0003271645,0.00011959504,0.00019457682,0.000120915116,0.0002981912,0.0012662695],"category_scores_gemma":[0.00012558348,0.000102781814,0.00028792102,0.000157401,0.00019447165,0.00025195768,0.000105309904,0.0006798507,0.00026783114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002180345,0.000052369163,0.00044464934,0.000029673438,0.0000027140213,0.00003293292,0.000027807457,0.000042203188,0.99769527,0.000048851987,0.000012698091,0.0013927744],"study_design_scores_gemma":[0.000033330798,0.002461904,0.009092702,0.000009252486,0.000037683654,0.00022615519,0.000048628153,0.0005762174,0.9843969,0.00010085197,0.00301007,0.0000063319753],"about_ca_topic_score_codex":0.0002467668,"about_ca_topic_score_gemma":0.0002719256,"teacher_disagreement_score":0.0012662695,"about_ca_system_score_codex":0.00014070024,"about_ca_system_score_gemma":0.0001238294,"threshold_uncertainty_score":0.004236102},"labels":[],"label_agreement":null},{"id":"W2605687312","doi":"10.1152/ajpheart.00800.2016","title":"Toll-like receptor 2 dominance over Toll-like receptor 4 in stressful conditions for its detrimental role in the heart","year":2017,"lang":"en","type":"article","venue":"American Journal of Physiology-Heart and Circulatory Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"TLR4; Receptor; TLR2; Toll-like receptor; Downregulation and upregulation; Tumor necrosis factor alpha; Signal transduction; Biology; Cell biology; Apoptosis; Knockout mouse; Endocrinology; Immunology; Innate immune system; Biochemistry; Gene","score_opus":0.009893668860105733,"score_gpt":0.26443910421666983,"score_spread":0.2545454353565641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605687312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856893,0.008937472,0.0029061807,0.0003292867,0.00015442295,0.00002424048,0.00012689868,0.000044500703,0.0017876904],"genre_scores_gemma":[0.99413055,0.0026869029,0.0012790757,0.00018544836,0.000090495014,0.00003383297,0.00011880699,0.000008077094,0.0014666396],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998474,0.000038879083,0.000012937595,0.0000290986,0.000023698363,0.00004785927],"domain_scores_gemma":[0.9998852,0.000012504041,0.00003633198,0.000009508319,0.0000127926205,0.0000436585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002815282,0.00051774795,0.0002388797,0.0002225067,0.00016751818,0.00032802683,0.00012557738,0.00031150877,0.0017408396],"category_scores_gemma":[0.00013324888,0.00013180284,0.0003099606,0.0000793168,0.00024758128,0.0002451534,0.00025450898,0.00059909944,0.00024860835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040872244,0.000021251764,0.0010869561,0.00010800608,0.000007752143,0.00022872498,0.00002321941,0.000033493143,0.9961534,0.00012239533,0.000039486775,0.0017666064],"study_design_scores_gemma":[0.00012460067,0.0033404964,0.107924365,0.0000925094,0.00018759209,0.0041321185,0.00045485568,0.001256597,0.8728297,0.0011524651,0.008463696,0.000040947492],"about_ca_topic_score_codex":0.000083414154,"about_ca_topic_score_gemma":0.00014748322,"teacher_disagreement_score":0.0017408396,"about_ca_system_score_codex":0.00012267867,"about_ca_system_score_gemma":0.00014382474,"threshold_uncertainty_score":0.005823672},"labels":[],"label_agreement":null},{"id":"W2605767208","doi":"10.1002/cyto.a.23109","title":"<scp>OMIP</scp>‐038: Innate immune assessment with a 14 color flow cytometry panel","year":2017,"lang":"en","type":"article","venue":"Cytometry Part A","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Innate immune system; Immune system; Immunology; Innate lymphoid cell; Acquired immune system; Cytokine; Biology; Flow cytometry; Pattern recognition receptor; Medicine","score_opus":0.024276411669872048,"score_gpt":0.27721889216457624,"score_spread":0.2529424804947042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605767208","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04955943,0.004975463,0.20607732,0.012350572,0.0053520403,0.00463643,0.17620312,0.05881546,0.4820302],"genre_scores_gemma":[0.1263484,0.0058370046,0.21303937,0.014745904,0.003180819,0.00971217,0.25238535,0.012856832,0.36189413],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984145,0.00025833352,0.00015169884,0.00021063788,0.0007641188,0.00020065288],"domain_scores_gemma":[0.9986558,0.0002236781,0.00009472572,0.00021408299,0.0006483656,0.00016334406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016368647,0.0016413766,0.0009182544,0.004080841,0.001222249,0.0016036028,0.0018736031,0.0017904328,0.17976026],"category_scores_gemma":[0.0020068467,0.00051943556,0.0005786833,0.0019479842,0.00043977186,0.0010780437,0.0013723366,0.001547164,0.087924816],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005413373,0.00016278241,0.0012157374,0.0003296022,0.000027001854,0.00025173408,0.000039712988,0.00036473444,0.20054638,0.003954153,0.7337949,0.058771938],"study_design_scores_gemma":[0.00014541957,0.00027592285,0.010289532,0.00014512808,0.000027583774,0.001614801,0.00004644486,0.004750414,0.24200192,0.0028980197,0.7376918,0.00011296326],"about_ca_topic_score_codex":0.0009013746,"about_ca_topic_score_gemma":0.0019828056,"teacher_disagreement_score":0.17976026,"about_ca_system_score_codex":0.0009993165,"about_ca_system_score_gemma":0.0010614444,"threshold_uncertainty_score":0.601358},"labels":[],"label_agreement":null},{"id":"W2606821149","doi":"10.1096/fasebj.30.1_supplement.1262.6","title":"The Src Family Tyrosine Kinase fyn Protects Mice from Inflammation‐induced Lung Injury","year":2016,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"FYN; Proto-oncogene tyrosine-protein kinase Src; Src family kinase; Tyrosine kinase; Tyrosine-protein kinase CSK; Inflammation; Lung; Cancer research; Bruton's tyrosine kinase; Medicine; Kinase; Chemistry; Cell biology; Immunology; Receptor; Biology; Internal medicine; SH3 domain","score_opus":0.011208731049133903,"score_gpt":0.23082961267675242,"score_spread":0.21962088162761853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606821149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99209386,0.001473626,0.002934743,0.00044132324,0.00016287419,0.000090121466,0.0012241332,0.00035494607,0.0012244502],"genre_scores_gemma":[0.980456,0.0017711645,0.004604828,0.00029501168,0.00007777168,0.0002652128,0.0022769456,0.00014037392,0.01011276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948716,0.000065137174,0.00007886967,0.00012321612,0.000102376296,0.00014318354],"domain_scores_gemma":[0.99909043,0.00007276907,0.00030904406,0.000086100765,0.00006539757,0.00037629905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005207078,0.0011495491,0.00096250325,0.0014047541,0.00041568236,0.0005597491,0.0007013475,0.0014375513,0.0029448646],"category_scores_gemma":[0.00028594455,0.00064849807,0.00069949345,0.000325443,0.00072945224,0.000692321,0.00036162505,0.0024779025,0.0007753175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019033295,0.0006711009,0.00038857758,0.00008253115,0.000036494017,0.00015610828,0.00004987322,0.00017241355,0.99344563,0.00029564,0.00022247995,0.0025758492],"study_design_scores_gemma":[0.00091690075,0.009333249,0.011405254,0.00010933412,0.0001250631,0.0012491381,0.00018690464,0.0031934401,0.96816474,0.00051146146,0.0047579277,0.000046660032],"about_ca_topic_score_codex":0.0010833379,"about_ca_topic_score_gemma":0.0012388357,"teacher_disagreement_score":0.0029448646,"about_ca_system_score_codex":0.00051955687,"about_ca_system_score_gemma":0.000561827,"threshold_uncertainty_score":0.009851515},"labels":[],"label_agreement":null},{"id":"W2607856708","doi":"10.2147/ott.s121618","title":"No genetic relationship between &lt;em&gt;TLR2&lt;/em&gt; rs4696480, rs3804100, and rs3804099 gene polymorphisms and female breast cancer in Saudi populations","year":2017,"lang":"en","type":"article","venue":"OncoTargets and Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Breast cancer; Medicine; Gene; Cancer; Oncology; Biology; Genetics; Internal medicine","score_opus":0.027574646184753974,"score_gpt":0.27573385777176,"score_spread":0.24815921158700605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607856708","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990534,0.00029544876,0.00008315612,0.000053006715,0.0000073832284,0.0000028937495,0.00021496054,0.0000017468519,0.000287938],"genre_scores_gemma":[0.9993734,0.00007177705,0.000071775685,0.000025032674,0.000007570283,0.000003524076,0.00017984961,0.0000014828249,0.0002655456],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997868,0.00004283775,0.000031180196,0.000074838295,0.000035563728,0.000028812174],"domain_scores_gemma":[0.99943167,0.00014981639,0.00023793847,0.000051790026,0.000056115125,0.000072619194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002647606,0.00029811414,0.00017008747,0.00029859174,0.00024795832,0.0002872145,0.00021492504,0.0003417766,0.0049457042],"category_scores_gemma":[0.00095839176,0.00015031423,0.0003828689,0.00038421844,0.0001783762,0.00014168413,0.00019087357,0.00025429577,0.00030751753],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010845894,0.000041554697,0.9879624,0.000051902916,0.000280278,0.0003793261,0.00019166162,0.00007719504,0.0056817746,0.0000765364,0.00021651515,0.0039563705],"study_design_scores_gemma":[0.0000415088,0.00018501944,0.9955318,0.000018966633,0.00022524883,0.0014753737,0.00016573824,0.0005175896,0.00078149186,0.000093132054,0.00095666375,0.000007400833],"about_ca_topic_score_codex":0.003076139,"about_ca_topic_score_gemma":0.0030685398,"teacher_disagreement_score":0.0049457042,"about_ca_system_score_codex":0.00013988503,"about_ca_system_score_gemma":0.000168889,"threshold_uncertainty_score":0.016544998},"labels":[],"label_agreement":null},{"id":"W2608670027","doi":"10.4049/jimmunol.1602131","title":"Cutting Edge: A Dual TLR2 and TLR7 Ligand Induces Highly Potent Humoral and Cell-Mediated Immune Responses","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Wellcome Trust","keywords":"TLR7; TLR2; Immune system; Dual (grammatical number); Ligand (biochemistry); Enhanced Data Rates for GSM Evolution; Cell biology; Immunology; Biology; Chemistry; Receptor; Toll-like receptor; Innate immune system; Genetics; Computer science","score_opus":0.014038376691591175,"score_gpt":0.24359632017047,"score_spread":0.22955794347887884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608670027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843778,0.0034727885,0.009235915,0.00022968106,0.00011135455,0.000092723276,0.0001931038,0.00011785458,0.0021686626],"genre_scores_gemma":[0.9890416,0.00096445024,0.0075245253,0.00018076872,0.00007046372,0.00005267417,0.00024677,0.0000197236,0.0018989188],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997466,0.00006670247,0.000018205623,0.000039432492,0.00006991012,0.000059077534],"domain_scores_gemma":[0.99986565,0.000029283034,0.000030240624,0.000015431353,0.000025591318,0.000033766657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041219746,0.0005086334,0.00030510625,0.00018996469,0.000088437584,0.00032771676,0.0001709908,0.000470071,0.0017404981],"category_scores_gemma":[0.00014372315,0.00011945565,0.00020305645,0.000088590445,0.0001849097,0.0002695056,0.00030363444,0.0006513228,0.00054207514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011557335,0.000054041826,0.00006235245,0.000054948483,0.0000050944304,0.00001768085,0.0000036181327,0.00004085879,0.9978528,0.00006283554,0.000033504042,0.0016967346],"study_design_scores_gemma":[0.000034107088,0.0012545893,0.0004502074,0.00000889975,0.000019912484,0.00017362538,0.000008132952,0.00035618074,0.99578494,0.00003984003,0.0018666844,0.000002884035],"about_ca_topic_score_codex":0.000055920642,"about_ca_topic_score_gemma":0.000116002935,"teacher_disagreement_score":0.0017404981,"about_ca_system_score_codex":0.0001516599,"about_ca_system_score_gemma":0.00019221357,"threshold_uncertainty_score":0.0058224797},"labels":[],"label_agreement":null},{"id":"W2609274154","doi":"10.1097/ta.0000000000001539","title":"C-peptide attenuates acute lung inflammation in a murine model of hemorrhagic shock and resuscitation by reducing gut injury","year":2017,"lang":"en","type":"article","venue":"The Journal of Trauma: Injury, Infection, and Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Armed Forces; Western University","funders":"","keywords":"Lipopolysaccharide; Lung; Resuscitation; Medicine; Evans Blue; Shock (circulatory); HMGB1; Vascular permeability; Inflammation; Circulatory system; Internal medicine; Pharmacology; Endocrinology; Anesthesia; Immunology","score_opus":0.011393682257894024,"score_gpt":0.29224932311710256,"score_spread":0.28085564085920856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2609274154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99524456,0.0021644952,0.0013470646,0.00019792459,0.000081482176,0.00009172547,0.00018199823,0.00007002732,0.0006207152],"genre_scores_gemma":[0.99219656,0.0020101178,0.0034005484,0.00018884488,0.00007528821,0.00017141458,0.00035721436,0.000013431939,0.0015865848],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981993,0.0000339256,0.000018990397,0.000026055428,0.000044162585,0.000056928908],"domain_scores_gemma":[0.9997553,0.0000137785855,0.0000970321,0.000019549676,0.000023123386,0.00009115592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029576162,0.0007880545,0.00050572696,0.00038203964,0.0001956288,0.00026664435,0.00030190742,0.0005863925,0.001207483],"category_scores_gemma":[0.00015714126,0.00015257137,0.00028963102,0.00016111984,0.0004386009,0.00033602136,0.00021334192,0.0011473539,0.00024475847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004353422,0.0011189114,0.0005915114,0.00023411981,0.00002413419,0.00017617398,0.000025247733,0.0001742406,0.98745537,0.00008421299,0.00012212123,0.005640501],"study_design_scores_gemma":[0.001196443,0.03823359,0.017804613,0.00009531141,0.00013618593,0.001118846,0.00012458759,0.0018084436,0.9360451,0.00013695855,0.0032727434,0.000027165745],"about_ca_topic_score_codex":0.0002458894,"about_ca_topic_score_gemma":0.00034288788,"teacher_disagreement_score":0.001207483,"about_ca_system_score_codex":0.00021677792,"about_ca_system_score_gemma":0.00036137158,"threshold_uncertainty_score":0.004039407},"labels":[],"label_agreement":null},{"id":"W2610160369","doi":"10.1016/j.lfs.2017.04.025","title":"Toll like receptor 4 and hepatocellular carcinoma; A systematic review","year":2017,"lang":"en","type":"review","venue":"Life Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Zabol University of Medical Sciences","keywords":"Hepatocellular carcinoma; Toll-like receptor; Cancer research; Receptor; Toll; Medicine; Internal medicine; Biology; Oncology; Immunology; Innate immune system","score_opus":0.08262321824551995,"score_gpt":0.33071042637360126,"score_spread":0.24808720812808133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610160369","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001916204,0.9993647,0.000032360127,0.00010820731,0.00005761032,0.000016247288,0.00010820298,0.0000023643327,0.000118846],"genre_scores_gemma":[0.0018442535,0.997689,0.0001001224,0.00017034903,0.000056019308,0.000021413422,0.00005803699,8.176297e-7,0.000060041395],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9992229,0.00017776227,0.0002826818,0.00010975486,0.00015807564,0.00004885014],"domain_scores_gemma":[0.99779797,0.0013358091,0.0005705031,0.000034180113,0.00019182937,0.00006979509],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015559796,0.001080867,0.004365314,0.0052198335,0.00026240514,0.0015622624,0.0010109508,0.0013806144,0.00493944],"category_scores_gemma":[0.005520695,0.00058140495,0.00290516,0.0069744643,0.00044379407,0.0012336422,0.0010326634,0.0009844773,0.000380697],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003641793,0.000044483517,0.0012636761,0.78902453,0.007029088,0.00030283947,0.00012484565,0.0003342683,0.00040779184,0.0005209848,0.012404157,0.18817912],"study_design_scores_gemma":[0.00091883686,0.000442698,0.011843664,0.62674093,0.12046623,0.0021721288,0.0005534284,0.00031033688,0.00036802384,0.0014671563,0.234558,0.00015861329],"about_ca_topic_score_codex":0.005597314,"about_ca_topic_score_gemma":0.015991325,"teacher_disagreement_score":0.005597314,"about_ca_system_score_codex":0.00095397566,"about_ca_system_score_gemma":0.0045417957,"threshold_uncertainty_score":0.016524076},"labels":[],"label_agreement":null},{"id":"W2611155373","doi":"10.1139/bcb-2016-0210","title":"<i>TLR2</i> affects <i>CD86</i> expression and inflammatory response in burn injury mice through regulation of <i>p38</i>","year":2017,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"TLR2; Agonist; CD86; TUNEL assay; Western blot; p38 mitogen-activated protein kinases; Tumor necrosis factor alpha; Inflammation; Chemistry; Apoptosis; Signal transduction; Pharmacology; Biology; Immunology; Receptor; Cell biology; TLR4; Biochemistry; MAPK/ERK pathway; Immune system","score_opus":0.0058818922498678,"score_gpt":0.22864344102828354,"score_spread":0.22276154877841575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611155373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98642516,0.0031546291,0.0063435216,0.0005267329,0.00017613762,0.000077400284,0.0008813556,0.00024841042,0.0021665886],"genre_scores_gemma":[0.983133,0.0024253782,0.0051627536,0.00042907562,0.00007196884,0.00028726214,0.0013733215,0.00009680458,0.0070204106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995788,0.00005526133,0.000042434025,0.00008365335,0.000105103776,0.0001347396],"domain_scores_gemma":[0.9997453,0.000012522253,0.00011432821,0.000025073892,0.000028739601,0.0000740815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029663704,0.0007829305,0.00060488057,0.00051036006,0.000330915,0.00049246085,0.0003112523,0.00062841346,0.0033499012],"category_scores_gemma":[0.00015007576,0.00030626205,0.00074394495,0.0002882899,0.00051692175,0.00057631946,0.00028127225,0.0020069,0.000980663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007616783,0.00014504681,0.00028865627,0.00010807105,0.000013529285,0.00007340941,0.00001609191,0.00006007785,0.99732983,0.00009953817,0.00009977568,0.0010042487],"study_design_scores_gemma":[0.00011296378,0.0018986847,0.008506571,0.00003601423,0.00007255286,0.0008459181,0.00013511062,0.0010981006,0.983265,0.00016669177,0.003844913,0.000017506445],"about_ca_topic_score_codex":0.00028908259,"about_ca_topic_score_gemma":0.0004524983,"teacher_disagreement_score":0.0033499012,"about_ca_system_score_codex":0.00026844905,"about_ca_system_score_gemma":0.00025358977,"threshold_uncertainty_score":0.011206508},"labels":[],"label_agreement":null},{"id":"W2612562059","doi":"10.3389/fimmu.2017.00530","title":"CXCL9-Derived Peptides Differentially Inhibit Neutrophil Migration In Vivo through Interference with Glycosaminoglycan Interactions","year":2017,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CXCL9; Chemistry; Glycosaminoglycan; Chemokine; Chondroitin sulfate; In vivo; Heparan sulfate; Cell biology; Chemokine receptor; Pharmacology; Biochemistry; Receptor; Biology","score_opus":0.01181247463907709,"score_gpt":0.23589587483191962,"score_spread":0.22408340019284254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2612562059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99454063,0.0013933068,0.0022753796,0.00011433768,0.0000665219,0.0001277873,0.000253797,0.000055726185,0.0011725967],"genre_scores_gemma":[0.9883922,0.0016223561,0.00619175,0.00014957074,0.000035058096,0.00021374019,0.0007642729,0.000021510257,0.0026095116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997359,0.000058538837,0.000024394194,0.000039764385,0.000057448546,0.000083935665],"domain_scores_gemma":[0.9999013,0.000021535941,0.000027880295,0.000010181819,0.000011849588,0.000027319458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023649857,0.00054731907,0.0003568796,0.00017764534,0.00013411889,0.00018094578,0.00027503673,0.00033435476,0.0012176712],"category_scores_gemma":[0.0001497113,0.00015376665,0.0002816525,0.00012840562,0.00019336965,0.00015390571,0.00014726655,0.00080039736,0.00039267444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035372248,0.00021811733,0.00005650515,0.00005217471,0.0000072736284,0.000026406358,0.000008788878,0.00013379022,0.9973616,0.00006279491,0.000065320724,0.0016534452],"study_design_scores_gemma":[0.00018874047,0.0030301479,0.0012645317,0.000009224703,0.000028855044,0.0001424693,0.000014260804,0.0013037208,0.99186456,0.000037281283,0.0021098314,0.000006453861],"about_ca_topic_score_codex":0.00029458842,"about_ca_topic_score_gemma":0.0005067972,"teacher_disagreement_score":0.0012176712,"about_ca_system_score_codex":0.00024370781,"about_ca_system_score_gemma":0.00023262227,"threshold_uncertainty_score":0.0040735006},"labels":[],"label_agreement":null},{"id":"W2614500237","doi":"10.1038/s41598-017-01513-w","title":"Lack of inflammatory gene expression in bats: a unique role for a transcription repressor","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":122,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Wildlife Health Cooperative; University of Saskatchewan","keywords":"Biology; Repressor; Interferon; RNA; Gene; Gene expression; Inflammation; Transcription (linguistics); Tumor necrosis factor alpha; Receptor; Molecular biology; Cell biology; Immunology; Genetics","score_opus":0.025529146385783612,"score_gpt":0.2808963822931258,"score_spread":0.25536723590734217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2614500237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97195846,0.009808234,0.0141414115,0.0004835954,0.000066939145,0.000035343885,0.00047367904,0.00018315569,0.0028491872],"genre_scores_gemma":[0.98882383,0.0019044294,0.0044840886,0.00023728475,0.00004105948,0.00004589738,0.00072193536,0.000049040966,0.0036924612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973303,0.00003548062,0.000022290766,0.000100624864,0.00006989918,0.000038564238],"domain_scores_gemma":[0.99969673,0.00008240849,0.00006960422,0.000048369053,0.000045137007,0.000057717298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002654261,0.00021156699,0.00036829285,0.00020883829,0.00017959543,0.0004991357,0.00023828553,0.00032365025,0.0013729824],"category_scores_gemma":[0.00023510982,0.00014593199,0.00019809918,0.00009791548,0.0005687792,0.00020912023,0.00020511972,0.0004251958,0.0005095874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042800755,0.000003152102,0.00040635286,0.000021912858,0.0000019585702,0.000046441393,0.000015999454,0.000010985772,0.99902916,0.000059389993,0.000009219874,0.000352696],"study_design_scores_gemma":[0.00002751027,0.0007458996,0.060095225,0.000041099313,0.00005094446,0.004642441,0.0003565044,0.0012266438,0.9239767,0.00042652062,0.008390196,0.000020197358],"about_ca_topic_score_codex":0.00036263364,"about_ca_topic_score_gemma":0.00048768017,"teacher_disagreement_score":0.0013729824,"about_ca_system_score_codex":0.00020011837,"about_ca_system_score_gemma":0.00024825803,"threshold_uncertainty_score":0.004593134},"labels":[],"label_agreement":null},{"id":"W2616469279","doi":"10.1016/j.ymeth.2017.05.004","title":"Measurement of bacterial capture and phagosome maturation of Kupffer cells by intravital microscopy","year":2017,"lang":"en","type":"article","venue":"Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"International Osteoporosis Foundation; FP7 People: Marie-Curie Actions; Canadian Institutes of Health Research; Alberta Innovates - Health Solutions","keywords":"Phagolysosome; Phagocytosis; Phagosome; Bacteria; Microbiology; Cell biology; Intravital microscopy; Biology; Macrophage; Phagocyte; Fluorescence microscope; Context (archaeology); Chemistry; In vivo; Biochemistry; In vitro; Fluorescence","score_opus":0.016409009779950214,"score_gpt":0.3177936293089065,"score_spread":0.3013846195289563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2616469279","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8530416,0.0037616838,0.13351983,0.00032070442,0.00014929198,0.00031424093,0.0011496713,0.0005858857,0.0071570403],"genre_scores_gemma":[0.9095317,0.0021632307,0.07722629,0.0002142247,0.00010626769,0.0008158736,0.0011547693,0.00020689976,0.0085808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990816,0.00015731284,0.00006920131,0.00022138274,0.00019520737,0.00027523926],"domain_scores_gemma":[0.99939,0.0002251771,0.00009587072,0.000086463835,0.00012842519,0.00007400377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009313541,0.0006567968,0.00047814864,0.00054017553,0.0006728134,0.00096266693,0.00061915314,0.00078968727,0.0016200121],"category_scores_gemma":[0.0006687788,0.00036186905,0.00036523942,0.00050146505,0.000493768,0.0006778399,0.0005317392,0.0017390971,0.0007359297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014047373,0.00006386396,0.0006364808,0.00006082312,0.000011752682,0.00002367636,0.00006577921,0.000054759006,0.99639976,0.0005192673,0.0000649,0.001958365],"study_design_scores_gemma":[0.000012140333,0.00012244089,0.0065283133,0.0000073675224,0.00001868396,0.00006230595,0.000048817456,0.0026067023,0.98943895,0.00012457359,0.0010197789,0.00000993343],"about_ca_topic_score_codex":0.0022902568,"about_ca_topic_score_gemma":0.0028428382,"teacher_disagreement_score":0.0022902568,"about_ca_system_score_codex":0.0009898904,"about_ca_system_score_gemma":0.00058966724,"threshold_uncertainty_score":0.0071821213},"labels":[],"label_agreement":null},{"id":"W2616728660","doi":"10.1016/j.celrep.2017.04.063","title":"Innate Recognition of Intracellular Bacterial Growth Is Driven by the TIFA-Dependent Cytosolic Surveillance Pathway","year":2017,"lang":"en","type":"article","venue":"Cell Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Toronto","funders":"Canadian Institutes of Health Research; Agence Nationale de la Recherche","keywords":"Biology; Cytosol; Shigella flexneri; Intracellular; Cell biology; Shigella; Microbiology; Bacteria; Proinflammatory cytokine; Peptidoglycan; Inflammation; NOD1; Innate immune system; Immunology; Escherichia coli; Immune system; Biochemistry; NOD2; Salmonella; Enzyme","score_opus":0.010648053596048352,"score_gpt":0.21004776818507873,"score_spread":0.19939971458903039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2616728660","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920293,0.001859418,0.004102166,0.00011924927,0.00004203866,0.000013966703,0.00018943583,0.0000759354,0.0015685123],"genre_scores_gemma":[0.99695253,0.0004541931,0.0014577219,0.000038603375,0.000015347543,0.000012192738,0.0001806229,0.0000074195846,0.0008813513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998344,0.00002343461,0.000009618471,0.000042921947,0.000033489898,0.00005610268],"domain_scores_gemma":[0.99985313,0.000015860152,0.000045888497,0.00002017986,0.000024255032,0.000040663952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001795617,0.00041405196,0.00020402721,0.00017911522,0.00013270238,0.00039723713,0.00014054617,0.00019889543,0.0008132934],"category_scores_gemma":[0.0001338562,0.00007769657,0.00021669277,0.00011165352,0.0003537929,0.00032088847,0.00034722363,0.00048880576,0.00028276964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001114683,0.0000071569925,0.0003335753,0.000022334558,0.0000015326831,0.000038546666,0.000009219984,0.000017127702,0.9985668,0.00008742265,0.00001581516,0.0007889879],"study_design_scores_gemma":[0.00002091479,0.0002986459,0.016434433,0.000012473591,0.000013945068,0.00052628765,0.00010538981,0.0011222224,0.97949743,0.000187866,0.00177185,0.000008554598],"about_ca_topic_score_codex":0.00022621188,"about_ca_topic_score_gemma":0.00035117703,"teacher_disagreement_score":0.0008132934,"about_ca_system_score_codex":0.00028100476,"about_ca_system_score_gemma":0.00025134417,"threshold_uncertainty_score":0.0027207732},"labels":[],"label_agreement":null},{"id":"W2620786451","doi":"10.11606/t.46.2017.tde-11042017-082711","title":"Vias de transdução de sinal e polimorfismo de &lt;i&gt;Toll-like Receptors&lt;/i&gt; na carcinogenese por HPV","year":2017,"lang":"pt","type":"dissertation","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research; McGill University; Fundação de Amparo à Pesquisa do Estado de São Paulo; Universidade do Minho; Ludwig Institute for Cancer Research","keywords":"Molecular biology; Biology; Receptor; Genetics","score_opus":0.013488792271009634,"score_gpt":0.2641589184527575,"score_spread":0.2506701261817479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620786451","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9598761,0.014161351,0.012997555,0.0008409873,0.00029528668,0.00013872236,0.00045745148,0.00019253523,0.011040006],"genre_scores_gemma":[0.98434806,0.0060000247,0.0028223484,0.00031395783,0.000063019535,0.00010021058,0.00030562398,0.00002443664,0.0060223565],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99941504,0.00014180726,0.000035967507,0.00015183378,0.00013078621,0.00012454108],"domain_scores_gemma":[0.99962795,0.000104884544,0.00010972085,0.00005717874,0.00006363906,0.00003653947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056693295,0.0004938834,0.00036100333,0.00039008568,0.00030667958,0.0011662436,0.00026951564,0.0006411945,0.004054827],"category_scores_gemma":[0.00072373176,0.00026922312,0.00060932996,0.00021030859,0.00066994206,0.00084886944,0.00072206836,0.0008283767,0.00088672416],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004862588,0.00015846983,0.009382922,0.0007364659,0.000057859284,0.0006264457,0.00058499904,0.00025093413,0.9592883,0.0017613099,0.00038317,0.026282854],"study_design_scores_gemma":[0.0000850383,0.0024693923,0.05300491,0.00032188598,0.00024740442,0.0037879492,0.002186194,0.0023617258,0.89721626,0.0023393263,0.035921514,0.0000584458],"about_ca_topic_score_codex":0.0004392574,"about_ca_topic_score_gemma":0.00034975604,"teacher_disagreement_score":0.004054827,"about_ca_system_score_codex":0.0004244792,"about_ca_system_score_gemma":0.00037382235,"threshold_uncertainty_score":0.013564706},"labels":[],"label_agreement":null},{"id":"W2620877422","doi":"10.1016/j.bbi.2017.05.020","title":"Live imaging of the innate immune response in neonates reveals differential TLR2 dependent activation patterns in sterile inflammation and infection","year":2017,"lang":"en","type":"article","venue":"Brain Behavior and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut Universitaire en Santé Mentale de Québec","funders":"National Institute of Neurological Disorders and Stroke","keywords":"TLR2; Inflammation; Innate immune system; Microglia; Biology; Immunology; Chemokine; Immune system; Neuroinflammation; In vivo; Genetically modified mouse; Cell biology; Neuroscience; Transgene","score_opus":0.013300821087968031,"score_gpt":0.26403055875289433,"score_spread":0.2507297376649263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620877422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96102935,0.004315199,0.03032029,0.00021058819,0.00005387308,0.00006154165,0.00083846966,0.0002458037,0.0029249352],"genre_scores_gemma":[0.95035666,0.004869743,0.03770056,0.00023251194,0.000039152812,0.00035406568,0.001109053,0.000102438375,0.0052357693],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99985814,0.000012038382,0.000010325766,0.00004589249,0.000032606644,0.000040883704],"domain_scores_gemma":[0.9998903,0.000021717638,0.000032264517,0.000009458471,0.000018502122,0.000027754932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002664517,0.00040634698,0.0002470175,0.00044933427,0.00017773159,0.0002874205,0.0002706445,0.0005219904,0.0012103042],"category_scores_gemma":[0.00017912188,0.0002722265,0.00027807074,0.0001810659,0.00028190127,0.0002903573,0.00033954432,0.0008849435,0.00030580105],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058465932,0.000007681469,0.0002535772,0.000027392738,0.0000019789316,0.00012539593,0.000028902079,0.000036906546,0.99860126,0.00009000966,0.000023298562,0.00074512756],"study_design_scores_gemma":[0.000011696235,0.00025713886,0.019683134,0.00003581503,0.000018840465,0.0015056389,0.00013248548,0.0014912658,0.9751463,0.0001871244,0.0015176852,0.000012836396],"about_ca_topic_score_codex":0.000534512,"about_ca_topic_score_gemma":0.00069761416,"teacher_disagreement_score":0.0012103042,"about_ca_system_score_codex":0.00024622394,"about_ca_system_score_gemma":0.00019795794,"threshold_uncertainty_score":0.004048884},"labels":[],"label_agreement":null},{"id":"W2620971443","doi":"10.3390/nu9060567","title":"Feeding a Mixture of Choline Forms to Lactating Dams Improves the Development of the Immune System in Sprague-Dawley Rat Offspring","year":2017,"lang":"en","type":"article","venue":"Nutrients","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Environmental Health Sciences; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Killam Trusts; Dairy Farmers of Canada","keywords":"Offspring; Choline; Lactation; Immune system; Weaning; Endocrinology; Internal medicine; Biology; Phosphatidylcholine; Lipopolysaccharide; Stimulation; Immunology; Medicine; Phospholipid; Biochemistry; Pregnancy","score_opus":0.011523598629682798,"score_gpt":0.25323949062597706,"score_spread":0.24171589199629426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620971443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985942,0.0005250295,0.00030163818,0.00009004706,0.000022841079,0.000011243839,0.00016042584,0.000050437648,0.00024406445],"genre_scores_gemma":[0.9908695,0.0013133647,0.002333761,0.00023335304,0.000018480363,0.00007992128,0.00046691624,0.000048791255,0.0046360535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997348,0.000040066134,0.000027793256,0.000076700286,0.000056251327,0.00006439462],"domain_scores_gemma":[0.99927884,0.000056272875,0.00019163026,0.000062543986,0.00007623732,0.00033438922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002256759,0.0006747427,0.00062432355,0.0006507641,0.0002382108,0.00032928673,0.00039014485,0.00043537543,0.0013126333],"category_scores_gemma":[0.0003352498,0.00030043584,0.00029300695,0.00014465216,0.0004335697,0.00032668142,0.00039120382,0.0011953544,0.00027160585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037597036,0.0008376797,0.0010683233,0.00007860009,0.0000346762,0.00010116833,0.000068679976,0.0000449148,0.989237,0.000040654297,0.000073087416,0.004655605],"study_design_scores_gemma":[0.0002547314,0.024731128,0.032665495,0.000045286983,0.00022290483,0.00032319548,0.00033421823,0.00054520596,0.93794155,0.00012205246,0.0027729685,0.000041206124],"about_ca_topic_score_codex":0.001746584,"about_ca_topic_score_gemma":0.0037479177,"teacher_disagreement_score":0.001746584,"about_ca_system_score_codex":0.0004047453,"about_ca_system_score_gemma":0.0005115335,"threshold_uncertainty_score":0.004391253},"labels":[],"label_agreement":null},{"id":"W2622269495","doi":"10.1159/000475982","title":"Novel Insights into the Direct Removal of Endotoxin by Polymyxin B Hemoperfusion","year":2017,"lang":"en","type":"article","venue":"Blood Purification","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Hemoperfusion; Chromatography; Chemistry; Polymyxin B; Lipopolysaccharide; Perfusion; Pharmacology; Biochemistry; Medicine; Immunology; Internal medicine; Antibiotics","score_opus":0.010026786577156294,"score_gpt":0.22926794670986247,"score_spread":0.21924116013270617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2622269495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90188664,0.019735016,0.072867826,0.0014511364,0.00012643788,0.0000852435,0.0001821767,0.00024203569,0.0034235278],"genre_scores_gemma":[0.9589928,0.00981274,0.02715717,0.0007308587,0.0001411071,0.00007116441,0.00017672805,0.00003228469,0.0028852813],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99987197,0.000028256953,0.000005440308,0.00002386519,0.000037685586,0.0000327687],"domain_scores_gemma":[0.99993014,0.000024459789,0.000021190886,0.0000058434043,0.000009049882,0.000009213837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002919874,0.00047667554,0.00024276554,0.00016388374,0.00008987187,0.00042801723,0.00034931954,0.0005701812,0.0013291397],"category_scores_gemma":[0.00021671344,0.00012952964,0.0002234104,0.00007051852,0.000323529,0.0005703097,0.00030836012,0.0007316846,0.00032899706],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082414124,0.00003288321,0.000111301684,0.00010338152,0.0000039594825,0.0000965362,0.000012963133,0.00008881483,0.9951952,0.0003311447,0.000057434612,0.0038839031],"study_design_scores_gemma":[0.000033983935,0.0006549307,0.0036494073,0.000027138187,0.000017985158,0.0008918902,0.000036868318,0.004053953,0.9857448,0.0005693193,0.004309199,0.000010593013],"about_ca_topic_score_codex":0.00016780019,"about_ca_topic_score_gemma":0.00008847841,"teacher_disagreement_score":0.0013291397,"about_ca_system_score_codex":0.00028729392,"about_ca_system_score_gemma":0.00015244863,"threshold_uncertainty_score":0.004446447},"labels":[],"label_agreement":null},{"id":"W2624070386","doi":"10.1016/j.vaccine.2017.05.067","title":"A novel combination adjuvant platform for human and animal vaccines","year":2017,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Saskatchewan Health Research Foundation; Canadian Institutes of Health Research; Krembil Foundation; Alberta Livestock and Meat Agency; Natural Sciences and Engineering Research Council of Canada; Bill and Melinda Gates Foundation","keywords":"Adjuvant; Immunogenicity; Immunization; CpG Oligodeoxynucleotide; Antigen; Immunology; Immune system; Immunity; Biology; Medicine; Virology","score_opus":0.02310627691317881,"score_gpt":0.2796740020068504,"score_spread":0.2565677250936716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2624070386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75550586,0.026313059,0.19082458,0.0017808956,0.0019691926,0.0012442138,0.0013559398,0.002109549,0.018896725],"genre_scores_gemma":[0.8570118,0.0068891663,0.11819072,0.00076010305,0.00033799114,0.0008420982,0.0012492723,0.00015380363,0.0145651],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997652,0.000040309496,0.000010228448,0.000039454775,0.0000818263,0.000062932675],"domain_scores_gemma":[0.99992263,0.0000111767,0.00001610297,0.000011852259,0.0000146019875,0.00002374023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033682436,0.0007915029,0.00053797715,0.00047015367,0.00021744594,0.00059090805,0.000542859,0.00079002103,0.0027536494],"category_scores_gemma":[0.00020546619,0.00032306265,0.00040548024,0.00019567116,0.00015882768,0.0007350967,0.00095899927,0.00091756263,0.0016277729],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027769117,0.00020853658,0.00013682869,0.000098025055,0.000024245715,0.00009265792,0.000012789895,0.0008716098,0.9728803,0.0008697992,0.001052196,0.023475315],"study_design_scores_gemma":[0.0002641121,0.003958675,0.0008891548,0.00004713112,0.00015262881,0.00097487064,0.000030610307,0.011965571,0.93413043,0.0010507692,0.04650038,0.000035539237],"about_ca_topic_score_codex":0.00013139464,"about_ca_topic_score_gemma":0.00037179797,"teacher_disagreement_score":0.0027536494,"about_ca_system_score_codex":0.00027225973,"about_ca_system_score_gemma":0.00041298702,"threshold_uncertainty_score":0.009211838},"labels":[],"label_agreement":null},{"id":"W2730214486","doi":"","title":"The toll-like receptors as the primary sensors of the innate immune system","year":2000,"lang":"en","type":"article","venue":"Immunologist","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Toll; Innate immune system; Primary (astronomy); Receptor; Toll-like receptor; Immune system; Immunology; Biology; Genetics; Physics","score_opus":0.0052794723221316255,"score_gpt":0.202298548064267,"score_spread":0.19701907574213537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2730214486","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18867849,0.7148269,0.041651342,0.017736664,0.0035148433,0.00010685561,0.0009100795,0.00029618407,0.03227871],"genre_scores_gemma":[0.7209303,0.22617294,0.017780181,0.0040073474,0.0029237976,0.000082187675,0.00046659613,0.00003246312,0.02760418],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.999658,0.00007945158,0.000022722808,0.000046699737,0.000118524746,0.00007455569],"domain_scores_gemma":[0.9997813,0.000039035964,0.00004366163,0.0000124433,0.00006813346,0.000055435918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007776546,0.0004987177,0.000469377,0.00080518815,0.00034787404,0.0018272966,0.00045295595,0.0008214153,0.002061104],"category_scores_gemma":[0.0007519055,0.00022460773,0.00026646594,0.00035744792,0.00081222533,0.001768728,0.00066006265,0.0014245863,0.0010946863],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002474333,0.00015449325,0.0041283704,0.0020749716,0.00008147304,0.0013220048,0.0007094669,0.0015514368,0.5542664,0.11599778,0.015733255,0.30150604],"study_design_scores_gemma":[0.00022602185,0.0013073109,0.013998874,0.0010546835,0.00022165474,0.0062400927,0.0014107571,0.004481714,0.3413853,0.11817191,0.51132125,0.00018033615],"about_ca_topic_score_codex":0.00020974004,"about_ca_topic_score_gemma":0.00030301182,"teacher_disagreement_score":0.002061104,"about_ca_system_score_codex":0.0007075506,"about_ca_system_score_gemma":0.00070352014,"threshold_uncertainty_score":0.0068950653},"labels":[],"label_agreement":null},{"id":"W2732383228","doi":"10.1371/journal.pone.0180073","title":"Combination of poly I:C and Pam3CSK4 enhances activation of B cells in vitro and boosts antibody responses to protein vaccines in vivo","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen Elizabeth II Health Sciences Centre; Immunovaccine (Canada); Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Dalhousie University","keywords":"TLR2; Antigen; Antibody; TLR3; Adjuvant; Immune system; Biology; T cell; Antigen-presenting cell; Toll-like receptor; Immunology; Innate immune system","score_opus":0.017417108701273547,"score_gpt":0.2539976870163661,"score_spread":0.23658057831509255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2732383228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9928236,0.0020840182,0.0024457483,0.0000940675,0.00008264475,0.0000800521,0.00028749453,0.00012157831,0.0019807303],"genre_scores_gemma":[0.99147147,0.0012157054,0.0041708797,0.00012423673,0.000042745574,0.000094066505,0.0006154439,0.000027650069,0.0022377793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997491,0.000060164457,0.0000310812,0.00003410706,0.000046666686,0.000078782075],"domain_scores_gemma":[0.9998191,0.00004779771,0.000039846163,0.000019117177,0.000015470137,0.000058699858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002494698,0.0007197085,0.00037286317,0.0003730354,0.00010643983,0.0003107026,0.00023908955,0.0003586503,0.0013216259],"category_scores_gemma":[0.0001512163,0.00021742085,0.00036593663,0.00020315328,0.00020280802,0.0001644802,0.0002165959,0.00079660426,0.00057015836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025332978,0.00010683667,0.000058714773,0.000049197086,0.000006746125,0.000015125981,0.0000049674545,0.00009701528,0.9984445,0.000014559365,0.000030306901,0.0009187396],"study_design_scores_gemma":[0.000057756424,0.0014315787,0.001680081,0.000007974831,0.000029016477,0.0000728808,0.000005975236,0.00066605455,0.9950299,0.00001404512,0.0009998844,0.0000047239437],"about_ca_topic_score_codex":0.00045937617,"about_ca_topic_score_gemma":0.0006965671,"teacher_disagreement_score":0.0013216259,"about_ca_system_score_codex":0.0002221792,"about_ca_system_score_gemma":0.00024042433,"threshold_uncertainty_score":0.004421234},"labels":[],"label_agreement":null},{"id":"W2732715425","doi":"10.1038/cdd.2017.112","title":"Culling of APCs by inflammatory cell death pathways restricts TIM3 and PD-1 expression and promotes the survival of primed CD8 T cells","year":2017,"lang":"en","type":"article","venue":"Cell Death and Differentiation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Ottawa","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Genentech; National Institutes of Health","keywords":"Priming (agriculture); Cell biology; Cytotoxic T cell; CD8; Programmed cell death; Pyroptosis; Biology; T cell; Apoptosis; Immunology; Immune system","score_opus":0.014080283696813863,"score_gpt":0.20984991541318032,"score_spread":0.19576963171636647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2732715425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99110365,0.0023154574,0.0028998186,0.00029154107,0.00007792692,0.000023197563,0.0003346962,0.00017679489,0.0027769038],"genre_scores_gemma":[0.994557,0.00046219857,0.0012415065,0.00008399772,0.000025316866,0.000017963563,0.00028636833,0.000039930415,0.0032856409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970955,0.000031877604,0.00001803804,0.00005234005,0.000050099407,0.00013815831],"domain_scores_gemma":[0.99977654,0.000026011025,0.0000616736,0.00003387059,0.000024953159,0.000077012206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018514716,0.00035241674,0.0003461168,0.0002684959,0.0004506978,0.00094436074,0.00024172182,0.0003468961,0.003921281],"category_scores_gemma":[0.00023445034,0.00017938955,0.00025895672,0.000117921445,0.00028342012,0.00053967326,0.0005031679,0.0012275442,0.0010599258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006643474,0.000056422898,0.00088673545,0.000083319115,0.000011311872,0.000117134055,0.000052522257,0.00025935777,0.99000365,0.000774741,0.00062011206,0.006470346],"study_design_scores_gemma":[0.000055026056,0.000261453,0.007301475,0.00001985142,0.00002301128,0.00039959743,0.00014321458,0.00167206,0.98312414,0.00030108244,0.0066882875,0.000010738963],"about_ca_topic_score_codex":0.00036920913,"about_ca_topic_score_gemma":0.0010470459,"teacher_disagreement_score":0.003921281,"about_ca_system_score_codex":0.0005798034,"about_ca_system_score_gemma":0.00042120132,"threshold_uncertainty_score":0.013117969},"labels":[],"label_agreement":null},{"id":"W2734603799","doi":"10.1021/acs.jafc.7b02109","title":"Intervention of Dietary Dipeptide Gamma-<scp>l</scp>-Glutamyl-<scp>l</scp>-Valine (γ-EV) Ameliorates Inflammatory Response in a Mouse Model of LPS-Induced Sepsis","year":2017,"lang":"en","type":"article","venue":"Journal of Agricultural and Food Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"University of Guelph","keywords":"Sepsis; Dipeptide; Inflammation; Immune system; Chemistry; Receptor; Signal transduction; Phosphorylation; Pharmacology; Peptide; Immunology; Medicine; Biochemistry","score_opus":0.01699769866099588,"score_gpt":0.23700316399375176,"score_spread":0.2200054653327559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2734603799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952615,0.0019988338,0.0011069961,0.00021558724,0.00008972129,0.000056578254,0.00027224905,0.00008634529,0.000912255],"genre_scores_gemma":[0.9930616,0.0019194398,0.0019504327,0.00018723519,0.000025620648,0.00009602545,0.0003345057,0.000022845292,0.0024023084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999082,0.000017704078,0.000010084613,0.00002105939,0.000015831438,0.000027033984],"domain_scores_gemma":[0.9999248,0.000006236085,0.000026113214,0.0000047321437,0.000008203451,0.000029975916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010668208,0.0004938551,0.0005309942,0.00028997558,0.0001315605,0.00021203612,0.000247231,0.0004567317,0.0011816083],"category_scores_gemma":[0.000094916795,0.00013046901,0.00023532848,0.00015064121,0.00030445796,0.00029214504,0.00018658336,0.0010129479,0.00018775571],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055432827,0.0009230011,0.0002127628,0.00028427996,0.000040303326,0.00009273792,0.000019750654,0.00020784288,0.98518884,0.00012382503,0.00013084829,0.007232476],"study_design_scores_gemma":[0.0008138689,0.017820263,0.0059226747,0.00007224875,0.0001492419,0.0003715619,0.00011616842,0.0013445638,0.9673044,0.00019061078,0.00587222,0.000022175234],"about_ca_topic_score_codex":0.00043270428,"about_ca_topic_score_gemma":0.00056709215,"teacher_disagreement_score":0.0011816083,"about_ca_system_score_codex":0.00019971808,"about_ca_system_score_gemma":0.00028190072,"threshold_uncertainty_score":0.003952861},"labels":[],"label_agreement":null},{"id":"W2737868829","doi":"10.3389/fphys.2017.00508","title":"Inhibition of Toll-Like Receptor Signaling as a Promising Therapy for Inflammatory Diseases: A Journey from Molecular to Nano Therapeutics","year":2017,"lang":"en","type":"review","venue":"Frontiers in Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":351,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Shanghai General Hospital; Crohn's and Colitis Foundation of Canada; Program for Professor of Special Appointment (Eastern Scholar) at Shanghai Institutions of Higher Learning; National Natural Science Foundation of China; Crohn's and Colitis Foundation","keywords":"Toll-like receptor; Receptor; Medicine; Inflammation; Signal transduction; Bioinformatics; Pharmacology; Computational biology; Immunology; Biology; Cell biology; Internal medicine; Innate immune system","score_opus":0.0335664284092887,"score_gpt":0.3131000186628145,"score_spread":0.2795335902535258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2737868829","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028507807,0.982605,0.0058386433,0.004372077,0.00087344146,0.000022213359,0.000052516152,0.00006379654,0.0033214425],"genre_scores_gemma":[0.018441124,0.970941,0.004089502,0.002788669,0.0009748446,0.000049139235,0.00008502312,0.00002362088,0.002607081],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975806,0.00007058097,0.000023477625,0.000036581954,0.00008477822,0.000026615739],"domain_scores_gemma":[0.99981433,0.000083246356,0.000029718689,0.000010466012,0.000041915064,0.000020310208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005273935,0.00049644226,0.0008084695,0.0008427797,0.00020670846,0.001198903,0.00037763073,0.0008956519,0.0016482272],"category_scores_gemma":[0.00045847372,0.00022648295,0.00043694623,0.0004828258,0.0006955148,0.0016357026,0.00052939064,0.002342223,0.0008868661],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044069605,0.00035492488,0.00053140835,0.012435871,0.00015885838,0.00070070283,0.000316204,0.0015663559,0.14540929,0.071091056,0.032682125,0.73431253],"study_design_scores_gemma":[0.00006403141,0.00088364305,0.0007379341,0.0015863879,0.00013133729,0.0017995709,0.00020396603,0.0013103049,0.027580665,0.02107665,0.9445603,0.0000651656],"about_ca_topic_score_codex":0.00018831328,"about_ca_topic_score_gemma":0.0004538039,"teacher_disagreement_score":0.0016482272,"about_ca_system_score_codex":0.00047655858,"about_ca_system_score_gemma":0.0006199622,"threshold_uncertainty_score":0.005513847},"labels":[],"label_agreement":null},{"id":"W2738956768","doi":"10.3791/56075","title":"Screening Bioactive Nanoparticles in Phagocytic Immune Cells for Inhibitors of Toll-like Receptor Signaling","year":2017,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Shanghai General Hospital; Crohn's and Colitis Foundation of Canada; Program for Professor of Special Appointment (Eastern Scholar) at Shanghai Institutions of Higher Learning; Crohn's and Colitis Foundation","keywords":"Reporter gene; Luciferase; Cell biology; Toll-like receptor; Biology; Immune system; Signal transduction; Cell culture; Innate immune system; Transfection; Chemistry; Gene expression; Immunology; Gene; Biochemistry","score_opus":0.032985868921810144,"score_gpt":0.38785584757153263,"score_spread":0.3548699786497225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738956768","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9575623,0.003386211,0.035664707,0.00016541845,0.0000734021,0.00039551666,0.0004781313,0.00025095104,0.0020233137],"genre_scores_gemma":[0.95501727,0.002714138,0.038105,0.00017212404,0.000025154473,0.00037120937,0.0007853873,0.000036714628,0.0027731317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997384,0.000049296556,0.000020120935,0.000057071244,0.00009730967,0.000037671605],"domain_scores_gemma":[0.9998946,0.00003619813,0.00002242228,0.000009434018,0.000023601144,0.000013735003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033081404,0.00065760285,0.0005109948,0.0003147934,0.00014472735,0.00026838688,0.00025887648,0.0006142819,0.00050354266],"category_scores_gemma":[0.0002279594,0.00023591863,0.0003916268,0.00018403286,0.00014638688,0.00019556856,0.0002449653,0.00032166645,0.00031865234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003326088,0.000029922674,0.000051837767,0.000039384788,0.000004312509,0.00002482433,0.000005263092,0.00017684669,0.99834776,0.000022541051,0.000019648356,0.0012445236],"study_design_scores_gemma":[0.000012923879,0.00047875897,0.00033994336,0.0000043114223,0.000013958714,0.000074214855,0.0000061649757,0.0010246959,0.99740905,0.0000136465615,0.0006190983,0.0000032202615],"about_ca_topic_score_codex":0.00015490437,"about_ca_topic_score_gemma":0.00034498094,"teacher_disagreement_score":0.00065760285,"about_ca_system_score_codex":0.00021931448,"about_ca_system_score_gemma":0.00018376372,"threshold_uncertainty_score":0.0017495751},"labels":[],"label_agreement":null},{"id":"W2745648472","doi":"10.1038/s41598-017-09909-4","title":"Expression and role of VLA-1 in resident memory CD8 T cell responses to respiratory mucosal viral-vectored immunization against tuberculosis","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Respiratory system; Tuberculosis; Immunization; Virology; Immunology; Medicine; Biology; Pathology; Immune system; Internal medicine","score_opus":0.00891099262811296,"score_gpt":0.24122123552559832,"score_spread":0.23231024289748536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2745648472","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998312,0.000638751,0.00052152586,0.00003658482,0.00001115157,0.0000053984386,0.00004382348,0.000015798178,0.00041491215],"genre_scores_gemma":[0.99894184,0.00014038947,0.0002551366,0.000022130436,0.0000054505394,0.000007663735,0.00008231328,0.000004218817,0.00054081174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986637,0.000024668916,0.000010234597,0.000027165535,0.000017385213,0.000054160635],"domain_scores_gemma":[0.9999279,0.000017794682,0.000017107823,0.00000750116,0.000009273391,0.000020318521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000125116,0.00016810816,0.00016288948,0.00012589978,0.000099552344,0.00029625438,0.00014031879,0.0003330631,0.0008430262],"category_scores_gemma":[0.00015471719,0.00009607612,0.000119019394,0.00005438129,0.00018143124,0.00018863982,0.00013835642,0.00057654554,0.0002382912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013437954,0.00004263864,0.0005163559,0.000017694803,0.0000016338857,0.00004087022,0.0000165971,0.000035176094,0.9977094,0.00006467165,0.000018821584,0.0014017434],"study_design_scores_gemma":[0.000052185384,0.0014424864,0.029636612,0.000031685617,0.00004389541,0.0007110826,0.00018877677,0.0021170618,0.9635599,0.00021481959,0.0019944953,0.000007115031],"about_ca_topic_score_codex":0.00017291219,"about_ca_topic_score_gemma":0.00015940345,"teacher_disagreement_score":0.0008430262,"about_ca_system_score_codex":0.00021629747,"about_ca_system_score_gemma":0.00012481882,"threshold_uncertainty_score":0.0028201938},"labels":[],"label_agreement":null},{"id":"W2748313123","doi":"10.1016/j.oooo.2017.06.020","title":"COMPOSITION OF IMMUNE CELL AGGREGATES AT THE INVASION FRONTS OF ORAL CANCER ASSOCIATED WITH CLINICAL OUTCOMES","year":2017,"lang":"en","type":"article","venue":"Oral Surgery Oral Medicine Oral Pathology and Oral Radiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia","funders":"","keywords":"Immune system; Cancer; Tumor microenvironment; Cancer cell; Cell; Biology; Immunology; Medicine; Cancer research; Internal medicine; Genetics","score_opus":0.04060457457748977,"score_gpt":0.31307778859962737,"score_spread":0.2724732140221376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2748313123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998806,0.0005037678,0.00012113949,0.000025622163,0.000008953233,0.000010092305,0.00008928629,0.0000065917725,0.0004286345],"genre_scores_gemma":[0.99931395,0.0001262125,0.00010478022,0.000016195583,0.000016493923,0.000013545926,0.00012190776,0.0000033896447,0.00028355216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99954873,0.00007283017,0.00004406975,0.000070600516,0.00012969408,0.00013408017],"domain_scores_gemma":[0.9989937,0.00016907469,0.00040759612,0.00004437283,0.00019279512,0.00019244188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047120018,0.00023057112,0.00043515099,0.0015058038,0.00046271228,0.0012594585,0.00023554712,0.0004943779,0.0020620045],"category_scores_gemma":[0.0013351331,0.00021827078,0.0002819346,0.0006973855,0.0003177998,0.000508525,0.0005691639,0.00050160656,0.0003871211],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042988732,0.00022355274,0.90155244,0.00010171304,0.00014552043,0.00076732674,0.0006716705,0.00023096756,0.0791352,0.0002872095,0.00038039265,0.012205112],"study_design_scores_gemma":[0.000021320204,0.0003374941,0.9870444,0.000020561949,0.00012701873,0.0009520965,0.0016401783,0.0010592979,0.007364736,0.0003476538,0.0010669894,0.000018328948],"about_ca_topic_score_codex":0.0008776548,"about_ca_topic_score_gemma":0.0007002258,"teacher_disagreement_score":0.0020620045,"about_ca_system_score_codex":0.000366404,"about_ca_system_score_gemma":0.00025975564,"threshold_uncertainty_score":0.0068980455},"labels":[],"label_agreement":null},{"id":"W2752198291","doi":"10.3389/fimmu.2017.01075","title":"The Toll for Trafficking: Toll-Like Receptor 7 Delivery to the Endosome","year":2017,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":174,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Endosome; Toll; Toll-like receptor; Cell biology; Receptor; Chemistry; Biology; Immunology; Innate immune system; Biochemistry","score_opus":0.036189496863662435,"score_gpt":0.29751263666404876,"score_spread":0.26132313980038635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752198291","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04649012,0.51871955,0.076883405,0.027631829,0.037868388,0.0021918851,0.0144700045,0.008807208,0.26693758],"genre_scores_gemma":[0.14703585,0.28170627,0.046236284,0.019076204,0.0053343815,0.0011907002,0.018014278,0.0011432837,0.48026273],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9996131,0.0000754569,0.00003415733,0.00007163136,0.00011916055,0.00008650549],"domain_scores_gemma":[0.9998228,0.000014849958,0.000032227534,0.000012668718,0.00006395795,0.00005357619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038715694,0.0014191124,0.0006801416,0.00068560895,0.0008850187,0.0016317002,0.0008488056,0.0016949349,0.05534255],"category_scores_gemma":[0.00043922183,0.00022456361,0.00086279557,0.0005268445,0.0004249788,0.0011333973,0.0017630359,0.0018373784,0.043566234],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013164397,0.00021532446,0.00067274267,0.0085262945,0.00013255929,0.0022444248,0.00016026876,0.0003743632,0.3391391,0.024471356,0.21938688,0.40336034],"study_design_scores_gemma":[0.00009990742,0.00037071927,0.0014510758,0.0006682295,0.00008831535,0.0038333195,0.00010104009,0.00044072518,0.072344296,0.0026114732,0.9179509,0.0000399859],"about_ca_topic_score_codex":0.00037873682,"about_ca_topic_score_gemma":0.00032621832,"teacher_disagreement_score":0.05534255,"about_ca_system_score_codex":0.0007709769,"about_ca_system_score_gemma":0.0011470289,"threshold_uncertainty_score":0.1851393},"labels":[],"label_agreement":null},{"id":"W2752845417","doi":"10.1139/cjpp-2017-0186","title":"Recombinant protein rMBP-NAP restricts tumor progression by triggering antitumor immunity in mouse metastatic lung cancer","year":2017,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Nap; Immune system; Cancer research; Cytotoxic T cell; Immunotherapy; Immunology; Melanoma; Cancer; Tumor progression; Lung cancer; Medicine; Biology; Pathology; Internal medicine; In vitro","score_opus":0.015035789695392963,"score_gpt":0.30593441041168035,"score_spread":0.29089862071628736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2752845417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99542916,0.0015563588,0.0017413476,0.00010768606,0.000020960057,0.0000374853,0.0002301789,0.000068971865,0.0008079185],"genre_scores_gemma":[0.9949151,0.00091421854,0.0017813218,0.000036268833,0.000010807813,0.000045163775,0.000464688,0.000012871233,0.0018196238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998927,0.000020276422,0.0000060381044,0.00001756851,0.000025512836,0.000037792466],"domain_scores_gemma":[0.9999417,0.000009530991,0.0000140374395,0.0000061348956,0.0000060568104,0.000022468012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012914989,0.00028453313,0.00023082914,0.00018774961,0.00008235073,0.00013996335,0.00016703778,0.00028451686,0.0008076706],"category_scores_gemma":[0.0000726672,0.00010072649,0.00016472001,0.00010944115,0.00015093108,0.00015284891,0.00012087799,0.0005685231,0.00026797113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007493436,0.00004363386,0.000048736776,0.000021623677,0.0000017893769,0.000022976155,0.0000043925556,0.00003135584,0.99919313,0.000024525958,0.000018154275,0.0005148145],"study_design_scores_gemma":[0.000040274965,0.0015136632,0.003056612,0.0000074747577,0.000019192694,0.00022137843,0.000019919422,0.0010641407,0.99226165,0.000037500213,0.0017548966,0.00000341506],"about_ca_topic_score_codex":0.0004850453,"about_ca_topic_score_gemma":0.0007239559,"teacher_disagreement_score":0.0008076706,"about_ca_system_score_codex":0.00020100686,"about_ca_system_score_gemma":0.00015902195,"threshold_uncertainty_score":0.0027019382},"labels":[],"label_agreement":null},{"id":"W2754310988","doi":"10.1371/journal.pone.0183662","title":"Inflammatory cytokine production in tumor cells upon chemotherapy drug exposure or upon selection for drug resistance","year":2017,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences North; University of Ottawa; NOSM University; Laurentian University","funders":"","keywords":"Docetaxel; Cytokine; Tumor necrosis factor alpha; Pharmacology; TLR4; Drug resistance; Cancer research; Medicine; Immunology; Biology; Inflammation; Internal medicine; Chemotherapy","score_opus":0.017828110035879943,"score_gpt":0.22684791319315104,"score_spread":0.2090198031572711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2754310988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99656016,0.0009627823,0.0009560358,0.000045556928,0.000026177238,0.000034473705,0.0005457769,0.000023154134,0.00084589294],"genre_scores_gemma":[0.9941788,0.00090120884,0.0015013719,0.00008175784,0.000019765992,0.000114863964,0.0011869639,0.000008642612,0.0020066772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981946,0.000031426283,0.000021945527,0.000038659928,0.000047319998,0.00004123527],"domain_scores_gemma":[0.99986994,0.000025038282,0.00003238906,0.00002256896,0.000028039005,0.000022025852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105411375,0.00019187665,0.0002974586,0.00016017028,0.00010570238,0.00026070964,0.00006572498,0.0002047793,0.0011140406],"category_scores_gemma":[0.00014475136,0.00011099271,0.00017803042,0.00023826076,0.00014366917,0.00021362626,0.00014369232,0.00038259377,0.0004148287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002542562,0.00003460756,0.0010446614,0.000032912758,0.0000035378168,0.00009075369,0.000053215415,0.000031101612,0.9974335,0.000018047744,0.000027093467,0.0009764003],"study_design_scores_gemma":[0.000036079284,0.0018095373,0.045101017,0.000011127767,0.0000291613,0.0007763087,0.00024037182,0.00080146897,0.94873774,0.000048825183,0.0023963833,0.000011999087],"about_ca_topic_score_codex":0.0001780177,"about_ca_topic_score_gemma":0.00022158027,"teacher_disagreement_score":0.0011140406,"about_ca_system_score_codex":0.00012658305,"about_ca_system_score_gemma":0.00009376968,"threshold_uncertainty_score":0.00372684},"labels":[],"label_agreement":null},{"id":"W2755875967","doi":"10.1038/labinvest.2017.90","title":"Neutrophils: a cornerstone of liver ischemia and reperfusion injury","year":2017,"lang":"en","type":"review","venue":"Laboratory Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":212,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Chemokine; Inflammation; Liver injury; Reperfusion injury; Liver transplantation; Medicine; Immunology; Ischemia; Cell adhesion molecule; Transplantation; Pathology; Internal medicine","score_opus":0.0613326044062604,"score_gpt":0.3199468690057895,"score_spread":0.2586142645995291,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755875967","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008375963,0.9974433,0.0002845953,0.00084434287,0.0006858534,0.000004996827,0.000016196871,0.000008819677,0.0006281395],"genre_scores_gemma":[0.0008484587,0.9962573,0.0002980919,0.0005619148,0.0014252696,0.000008740211,0.000026946815,0.0000014491569,0.0005717301],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996679,0.000055817716,0.000057209556,0.0000544655,0.00013344361,0.000031147636],"domain_scores_gemma":[0.9990086,0.00039818857,0.00014991174,0.000027982993,0.0003145908,0.00010067006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010294357,0.0010343519,0.001277349,0.0015642905,0.0002239299,0.0013227044,0.0007395487,0.0015906041,0.0020663263],"category_scores_gemma":[0.0016646112,0.00023378427,0.00030019847,0.0011375726,0.00091206864,0.0013935043,0.0011190019,0.002454153,0.0015012423],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009926608,0.000047673962,0.0004559386,0.007489657,0.000045769015,0.00022793506,0.000041804036,0.00019459057,0.0014864842,0.0034094304,0.041624498,0.9448769],"study_design_scores_gemma":[0.000032281474,0.00012010963,0.0012559334,0.0045424756,0.00014456174,0.0017020449,0.0000958131,0.00014649612,0.000901019,0.0039084996,0.98712486,0.000025880972],"about_ca_topic_score_codex":0.0006964225,"about_ca_topic_score_gemma":0.0014615727,"teacher_disagreement_score":0.0020663263,"about_ca_system_score_codex":0.0005187878,"about_ca_system_score_gemma":0.0019360947,"threshold_uncertainty_score":0.0069125295},"labels":[],"label_agreement":null},{"id":"W2757927998","doi":"10.1016/j.ejmech.2017.09.070","title":"Design, synthesis and immunological evaluation of novel amphiphilic desmuramyl peptides","year":2017,"lang":"en","type":"article","venue":"European Journal of Medicinal Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Energy; NOSM University; Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada; Lakehead University","keywords":"Muramyl dipeptide; Chemistry; Muramic acid; Immune system; Peptide; Dipeptide; Amphiphile; Secretion; Biochemistry; Glycoprotein; Moiety; Stereochemistry; In vitro; Cell wall; Immunology; Peptidoglycan; Biology","score_opus":0.06797099220841797,"score_gpt":0.2865033531906085,"score_spread":0.21853236098219053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2757927998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9918806,0.001558003,0.0051214853,0.00010075098,0.000032564232,0.0001369982,0.00010132991,0.000020412504,0.0010478508],"genre_scores_gemma":[0.9906,0.0011503401,0.0064219832,0.00009460793,0.000014907959,0.00008296132,0.00016507597,0.0000075907997,0.001462506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991775,0.000017196075,0.00000816061,0.000013350898,0.000019203891,0.000024359295],"domain_scores_gemma":[0.99989843,0.000014762373,0.00003675825,0.0000064737164,0.000015439648,0.000028101938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026927935,0.0002850618,0.00014661711,0.00010655834,0.00009951486,0.00023035884,0.00017841687,0.00027523635,0.0006588353],"category_scores_gemma":[0.00021740093,0.00010161462,0.00015863909,0.000072585615,0.00014271504,0.0002603589,0.00022771652,0.0004262186,0.00018050584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026400274,0.000112091,0.00013685916,0.00009545574,0.0000065572776,0.00014293152,0.000032698583,0.0008280955,0.99172664,0.00025222066,0.000049468028,0.0063530323],"study_design_scores_gemma":[0.00013737584,0.0025203775,0.00072443124,0.000011014341,0.00002018346,0.00029438504,0.000023824923,0.0013252072,0.9903716,0.00009687478,0.004465461,0.000009242547],"about_ca_topic_score_codex":0.00009430772,"about_ca_topic_score_gemma":0.00014690244,"teacher_disagreement_score":0.0006588353,"about_ca_system_score_codex":0.000174733,"about_ca_system_score_gemma":0.00014512174,"threshold_uncertainty_score":0.0022040606},"labels":[],"label_agreement":null},{"id":"W2759237315","doi":"10.1016/j.chom.2017.08.008","title":"O-Acetylation of Peptidoglycan Limits Helper T Cell Priming and Permits Staphylococcus aureus Reinfection","year":2017,"lang":"en","type":"article","venue":"Cell Host & Microbe","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Cedars-Sinai Medical Center","keywords":"Peptidoglycan; Staphylococcus aureus; Biology; Immunity; Microbiology; Priming (agriculture); Immunology; Immune system; Bacteria; Cell wall; Biochemistry","score_opus":0.01077949718934589,"score_gpt":0.23183380766805367,"score_spread":0.22105431047870777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2759237315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983455,0.00015264262,0.00040633415,0.000044671546,0.000026440199,0.000012043083,0.000045249013,0.000024172517,0.0009430943],"genre_scores_gemma":[0.9984068,0.00007754937,0.00036622823,0.000037932517,0.0000082138395,0.000008486294,0.00008477634,0.000013329084,0.0009966596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959964,0.00006157291,0.00003413489,0.000061937986,0.00006633826,0.00017641984],"domain_scores_gemma":[0.9996458,0.00007625848,0.00009114159,0.000068664085,0.00002333822,0.00009471751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023265842,0.00038525456,0.00025415447,0.00017468636,0.00015111151,0.00051293,0.00033023424,0.00055545557,0.0016646485],"category_scores_gemma":[0.00028406558,0.00023626644,0.00023836596,0.00008375944,0.00059052324,0.0003111354,0.0003323881,0.0006699395,0.0004602377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003423718,0.00007188026,0.00019313194,0.0000080700975,0.0000026033197,0.00003318172,0.000013944821,0.000047658163,0.9985967,0.00011647585,0.000022366647,0.0005516326],"study_design_scores_gemma":[0.000027092823,0.0010282972,0.004795881,0.000005031763,0.000008912429,0.00012891312,0.00006385376,0.000601363,0.9924465,0.00009964817,0.0007878888,0.0000067772185],"about_ca_topic_score_codex":0.0011159185,"about_ca_topic_score_gemma":0.0022848381,"teacher_disagreement_score":0.0016646485,"about_ca_system_score_codex":0.0003268462,"about_ca_system_score_gemma":0.00039028173,"threshold_uncertainty_score":0.0055687428},"labels":[],"label_agreement":null},{"id":"W2760887315","doi":"10.4049/jimmunol.1700985","title":"Mechanisms of the Innate Defense Regulator Peptide-1002 Anti-Inflammatory Activity in a Sterile Inflammation Mouse Model","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Regulator; Innate immune system; Inflammatory response; Cell biology; Peptide; Biology; Immunology; Biochemistry; Immune system; Gene","score_opus":0.012938086978071792,"score_gpt":0.23112038345730146,"score_spread":0.21818229647922965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760887315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98655266,0.0033557708,0.0066318093,0.00028922263,0.00008388626,0.00012220567,0.0006989983,0.00021791688,0.0020475925],"genre_scores_gemma":[0.990377,0.0020069883,0.0037272493,0.0002158716,0.000026316104,0.00018531017,0.0007727353,0.0000253946,0.002663153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981266,0.00003243867,0.000013955983,0.000042811127,0.00005103417,0.000047152906],"domain_scores_gemma":[0.9999199,0.0000067991805,0.00002826828,0.0000098061255,0.0000071462637,0.000028119754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021877313,0.00061764225,0.00040370165,0.00042325404,0.00011949199,0.00028751558,0.00023486133,0.0003762801,0.00082370045],"category_scores_gemma":[0.000075026524,0.00014866998,0.00031045655,0.00015191623,0.00032096068,0.00026006962,0.00014489942,0.0011020955,0.0003035447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016719624,0.000079402045,0.000072096154,0.000029599605,0.0000035374858,0.00005549381,0.000005234216,0.00005244962,0.99858594,0.00008929336,0.000032510972,0.00082714524],"study_design_scores_gemma":[0.000118350836,0.002603938,0.0049533388,0.000014807228,0.000042191285,0.00057945814,0.00004579375,0.0018504757,0.986403,0.0002492173,0.0031259928,0.000013421327],"about_ca_topic_score_codex":0.00013044984,"about_ca_topic_score_gemma":0.0001562649,"teacher_disagreement_score":0.00082370045,"about_ca_system_score_codex":0.00018268038,"about_ca_system_score_gemma":0.00017859474,"threshold_uncertainty_score":0.0027555823},"labels":[],"label_agreement":null},{"id":"W2763257724","doi":"10.1126/science.aam9690","title":"Visualizing the function and fate of neutrophils in sterile injury and repair","year":2017,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":516,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Intravital microscopy; Ischemia; Bone marrow; Function (biology); Immunology; Perspective (graphical); Medicine; Pathology; Cell biology; Biology; Microcirculation; Internal medicine; Computer science","score_opus":0.013778182113207249,"score_gpt":0.2843897827824833,"score_spread":0.27061160066927603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763257724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.888215,0.011567041,0.08463597,0.0016450377,0.00026048982,0.00013067259,0.00042097358,0.00037251154,0.0127523355],"genre_scores_gemma":[0.89879256,0.0063496716,0.077134386,0.00045245595,0.00007433521,0.00014017032,0.00033063273,0.00009083201,0.016634919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998443,0.00004172305,0.000009889945,0.000028640876,0.000031642667,0.000043866887],"domain_scores_gemma":[0.9999094,0.00001722656,0.00001510553,0.000011530531,0.0000147759165,0.0000319692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003840101,0.00021682939,0.00013037176,0.000505962,0.00035385447,0.00048518262,0.0002590735,0.00068633,0.0019155017],"category_scores_gemma":[0.00023803007,0.00024415995,0.00013884132,0.00016816941,0.00037725092,0.0007284355,0.0004805995,0.0010085506,0.0004252728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022115569,0.000039061695,0.0009310154,0.00006043581,0.0000054640172,0.00024929858,0.00012800851,0.0003395618,0.983991,0.0031859193,0.00036727852,0.010481873],"study_design_scores_gemma":[0.00010307974,0.0010268494,0.017572215,0.0001676534,0.000040715073,0.0038668332,0.0007691997,0.012877881,0.9273654,0.0054328046,0.030729108,0.000048311675],"about_ca_topic_score_codex":0.0007668936,"about_ca_topic_score_gemma":0.0012718303,"teacher_disagreement_score":0.0019155017,"about_ca_system_score_codex":0.00030579555,"about_ca_system_score_gemma":0.00038667186,"threshold_uncertainty_score":0.0064080358},"labels":[],"label_agreement":null},{"id":"W2765889424","doi":"10.1016/j.imbio.2017.10.042","title":"Adenoviral vector-mediated GM-CSF gene transfer improves anti-mycobacterial immunity in mice – role of regulatory T cells","year":2017,"lang":"en","type":"article","venue":"Immunobiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Deutsches Zentrum für Lungenforschung; Bundesministerium für Bildung und Forschung","keywords":"Immunology; Immunity; Immunopathology; Mycobacterium bovis; Immune system; Biology; Granulocyte macrophage colony-stimulating factor; Medicine; Tuberculosis; Cytokine; Mycobacterium tuberculosis; Pathology","score_opus":0.006019750920172677,"score_gpt":0.21095138274627215,"score_spread":0.20493163182609947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765889424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98920166,0.0025735374,0.004299392,0.00059413846,0.00023545962,0.00008777398,0.00051916525,0.00052882155,0.0019600908],"genre_scores_gemma":[0.98895895,0.0011464587,0.0040461496,0.00018327085,0.0000901031,0.0000708879,0.00043407417,0.00010506579,0.0049650734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995018,0.000090884576,0.000046564284,0.000093722,0.00011306509,0.0001539321],"domain_scores_gemma":[0.9995907,0.00006408944,0.000117331874,0.000054050204,0.000030583167,0.00014323158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038438075,0.0010372882,0.0006338714,0.0009077784,0.00022584316,0.0006049578,0.00049651443,0.0010091561,0.0016101887],"category_scores_gemma":[0.00023954934,0.00030264806,0.00047890723,0.00027465727,0.0008804883,0.00074535666,0.0002255376,0.002500985,0.00046819748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000606296,0.00016518487,0.0000760731,0.000032645137,0.0000061760375,0.000045378558,0.000014577409,0.00007579394,0.9969875,0.00015360053,0.000046749785,0.0017901117],"study_design_scores_gemma":[0.0002223197,0.0012980351,0.0013275247,0.000012786186,0.00004663199,0.00016519647,0.000026982067,0.00093536504,0.9941578,0.00013636322,0.0016625801,0.000008437511],"about_ca_topic_score_codex":0.0006167103,"about_ca_topic_score_gemma":0.00060157524,"teacher_disagreement_score":0.0016101887,"about_ca_system_score_codex":0.0003578726,"about_ca_system_score_gemma":0.00047828743,"threshold_uncertainty_score":0.0053866506},"labels":[],"label_agreement":null},{"id":"W2766757941","doi":"10.1016/j.jim.2017.10.004","title":"Comparison of RAW264.7, human whole blood and PBMC assays to screen for immunomodulators","year":2017,"lang":"en","type":"article","venue":"Journal of Immunological Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; BC Cancer Agency","funders":"Lotte and John Hecht Memorial Foundation","keywords":"Peripheral blood mononuclear cell; Lipopolysaccharide; Macrophage; Whole blood; In vitro; Immunology; Biology; Cell culture; Inflammation; Blood cell; Nitric oxide; Biochemistry; Endocrinology","score_opus":0.08572300628353867,"score_gpt":0.4621935135482927,"score_spread":0.376470507264754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766757941","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9460541,0.018905519,0.024591507,0.00050308293,0.0005765993,0.0004434465,0.0025902912,0.00026658614,0.006068856],"genre_scores_gemma":[0.93237835,0.008274309,0.047169924,0.0006551631,0.0003476825,0.00073944987,0.0039968425,0.000059393773,0.0063788625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861157,0.00061814045,0.0001319528,0.00012951516,0.00032626654,0.00018250532],"domain_scores_gemma":[0.999086,0.00044739875,0.000092071525,0.00007855582,0.00021748824,0.000078486475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015242731,0.00087440235,0.0006752344,0.0009453587,0.00020553928,0.00067693775,0.00036195133,0.0005309051,0.0014330168],"category_scores_gemma":[0.0010554594,0.00024476266,0.00043127124,0.0006228835,0.00024081754,0.00029527338,0.0002603569,0.0008958218,0.00057859416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013379263,0.00033724046,0.0026939863,0.00028344884,0.000049410053,0.000079256846,0.00004277242,0.00012095084,0.9857028,0.00009543057,0.00021317466,0.009043668],"study_design_scores_gemma":[0.00010226658,0.0039494215,0.021433493,0.00004714716,0.0001769963,0.00063083525,0.00009054754,0.0012450288,0.96937996,0.00014520396,0.0027767168,0.00002231639],"about_ca_topic_score_codex":0.00019144353,"about_ca_topic_score_gemma":0.0004784427,"teacher_disagreement_score":0.0015242731,"about_ca_system_score_codex":0.00011477479,"about_ca_system_score_gemma":0.0003292748,"threshold_uncertainty_score":0.00806123},"labels":[],"label_agreement":null},{"id":"W2767082490","doi":"10.1016/j.rvsc.2017.10.002","title":"Characterization of innate responses induced by in ovo administration of encapsulated and free forms of ligands of Toll-like receptor 4 and 21 in chicken embryos","year":2017,"lang":"en","type":"article","venue":"Research in Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"In ovo; Toll-like receptor; Toll; Innate immune system; Cell biology; Receptor; Chemistry; Embryo; Biology; Immunology; Biochemistry","score_opus":0.06197052296149443,"score_gpt":0.36343653541125687,"score_spread":0.30146601244976245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767082490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9981628,0.00049244054,0.0006000324,0.000028325323,0.000020536425,0.000014989447,0.00015789695,0.0000072483263,0.00051572215],"genre_scores_gemma":[0.9950464,0.00057288265,0.00077003887,0.000052843832,0.0000093190965,0.000046358662,0.00030885637,0.000008768678,0.0031845758],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999312,0.000008918561,0.000006971884,0.000021077798,0.000010482389,0.000021340007],"domain_scores_gemma":[0.9999019,0.000032561707,0.000023922692,0.000010136607,0.000011314471,0.00002006193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001039874,0.00021802368,0.00017789299,0.00014411207,0.00010322381,0.00018663034,0.000109797074,0.00020758618,0.00084596296],"category_scores_gemma":[0.000120905075,0.00012286528,0.00019101905,0.000060210783,0.00029971378,0.00017513284,0.00009188044,0.00046427344,0.00012774675],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033981173,0.000017098431,0.00024054738,0.000019843153,0.0000020384466,0.000047230318,0.00002406707,0.0000215494,0.99884915,0.000044031094,0.000008010007,0.00038660478],"study_design_scores_gemma":[0.000024677696,0.0010042436,0.015748868,0.000008387839,0.0000297478,0.00014141906,0.00013906877,0.00037127046,0.98153114,0.000041622392,0.00095262664,0.0000069819516],"about_ca_topic_score_codex":0.00054329616,"about_ca_topic_score_gemma":0.00080491573,"teacher_disagreement_score":0.00084596296,"about_ca_system_score_codex":0.00018802301,"about_ca_system_score_gemma":0.00014377126,"threshold_uncertainty_score":0.0028300285},"labels":[],"label_agreement":null},{"id":"W2767821190","doi":"10.4049/jimmunol.1700251","title":"Loss of NLRX1 Exacerbates Neural Tissue Damage and NF-κB Signaling following Brain Injury","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"National Institute of Neurological Disorders and Stroke; University of North Carolina at Chapel Hill","keywords":"Downregulation and upregulation; Neuroinflammation; Microglia; Neuroscience; Traumatic brain injury; Brain damage; Biology; Inflammation; Medicine; Immunology","score_opus":0.011917409783872982,"score_gpt":0.27216583621156126,"score_spread":0.2602484264276883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767821190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982324,0.00067408924,0.0006231819,0.00010699943,0.000014415034,0.000013898504,0.00013574623,0.000029369812,0.00016987661],"genre_scores_gemma":[0.99684286,0.0008766997,0.00081536913,0.0000874954,0.000016582955,0.000039393548,0.00028128867,0.000010906256,0.0010293351],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998142,0.000030785995,0.000034021305,0.00003728806,0.000038524726,0.000045321074],"domain_scores_gemma":[0.99978715,0.00001215772,0.00010498342,0.000018522633,0.000015468258,0.000061633924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019879609,0.0004829593,0.00046346162,0.00034509803,0.00019669453,0.00040161386,0.00018055628,0.00039330593,0.001193746],"category_scores_gemma":[0.00012245883,0.0001658682,0.00028990424,0.00018270705,0.00047837984,0.00029410518,0.00022788637,0.00091857027,0.00026500458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005047286,0.000098698845,0.00069945096,0.000058851245,0.000011850364,0.00009682575,0.000026616724,0.000035317433,0.99765587,0.000030152445,0.000040816103,0.0007407622],"study_design_scores_gemma":[0.000112489346,0.0038158176,0.06432455,0.00006004445,0.000094215604,0.0029193007,0.00038250626,0.0010392988,0.9249647,0.00024367523,0.002024985,0.000018461522],"about_ca_topic_score_codex":0.0002584348,"about_ca_topic_score_gemma":0.0003849348,"teacher_disagreement_score":0.001193746,"about_ca_system_score_codex":0.00019929065,"about_ca_system_score_gemma":0.00014737765,"threshold_uncertainty_score":0.0039934516},"labels":[],"label_agreement":null},{"id":"W2769804850","doi":"","title":"Functional influence of IL10 promoter polymorphisms on gene transcription and IL10 production","year":2000,"lang":"en","type":"article","venue":"Journal of Rheumatology Supplement","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Promoter; Interleukin 10; Gene; Genetics; Gene expression; Internal medicine; Biology; Cytokine","score_opus":0.008524312800618937,"score_gpt":0.2135105784871823,"score_spread":0.20498626568656336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769804850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99786806,0.00025578254,0.00063241733,0.00010248551,0.00004606771,0.000009007917,0.0005818228,0.000015706833,0.0004885689],"genre_scores_gemma":[0.99721634,0.00014298716,0.0006022848,0.000058272424,0.000032277694,0.000019050145,0.0006445884,0.0000354045,0.0012486577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995808,0.00017767693,0.000033849818,0.00007661924,0.000036845708,0.00009422125],"domain_scores_gemma":[0.99877673,0.00076377264,0.00009254049,0.00008267082,0.000061627565,0.00022262956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003770656,0.00044125755,0.00035500005,0.00028237872,0.0001404331,0.00034737992,0.00027396917,0.0004764466,0.007078272],"category_scores_gemma":[0.00071458414,0.0002608556,0.00039057762,0.00018855513,0.00046557243,0.00015248831,0.00019489414,0.0006427017,0.00090659637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00803518,0.00015593634,0.002782176,0.00004433023,0.000029199206,0.00016370519,0.000047472793,0.00013351343,0.98670167,0.00010039511,0.0001009589,0.0017054974],"study_design_scores_gemma":[0.0009993954,0.0043116733,0.12744683,0.00006492646,0.00034368507,0.001936058,0.00025499013,0.003204489,0.8579928,0.000435675,0.0029623115,0.000047125894],"about_ca_topic_score_codex":0.0015850775,"about_ca_topic_score_gemma":0.001330325,"teacher_disagreement_score":0.007078272,"about_ca_system_score_codex":0.0001712089,"about_ca_system_score_gemma":0.0002646748,"threshold_uncertainty_score":0.023679137},"labels":[],"label_agreement":null},{"id":"W2771170277","doi":"10.1021/acs.langmuir.7b03168","title":"Self-Assembled Ligands Targeting TLR7: A Molecular Level Investigation","year":2017,"lang":"en","type":"article","venue":"Langmuir","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Health Economics","funders":"Kommission für Technologie und Innovation","keywords":"Pharmacophore; Chemistry; TLR7; Cytotoxicity; Phospholipid; Polyethylene glycol; Internalization; Biophysics; Dynamic light scattering; Biochemistry; Combinatorial chemistry; Receptor; Toll-like receptor; Innate immune system; Membrane; In vitro; Biology; Nanotechnology; Nanoparticle; Materials science","score_opus":0.01961371850001309,"score_gpt":0.25069194703053865,"score_spread":0.23107822853052556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2771170277","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787764,0.0036752077,0.014265034,0.00025004774,0.000049205537,0.00008945817,0.000097785065,0.000065553184,0.002731254],"genre_scores_gemma":[0.9847601,0.0029651101,0.0099444995,0.00015527502,0.000021524862,0.00008243371,0.00018520931,0.000017332517,0.0018685784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991155,0.000022275575,0.0000038926373,0.000013946786,0.00002972773,0.000018646228],"domain_scores_gemma":[0.999923,0.000021777934,0.000015376429,0.0000064627843,0.000022559441,0.0000109063285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016937894,0.0002343185,0.00016201909,0.00012493289,0.00012110644,0.0001843005,0.0002445658,0.00034077239,0.000517976],"category_scores_gemma":[0.00019190519,0.00010027185,0.00016410986,0.00009183674,0.00015530916,0.00029915138,0.00016542833,0.00039719226,0.00024297395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036727524,0.000046605033,0.000054533593,0.00007107497,0.000005349149,0.00003264758,0.000019048466,0.00021763089,0.9973425,0.00031701577,0.000043567125,0.0018132735],"study_design_scores_gemma":[0.000008937393,0.00048029184,0.00030864342,0.00000782112,0.000011692577,0.00007679175,0.000020831292,0.003286473,0.9937412,0.0000811741,0.0019714201,0.000004714358],"about_ca_topic_score_codex":0.00013760607,"about_ca_topic_score_gemma":0.00017193051,"teacher_disagreement_score":0.000517976,"about_ca_system_score_codex":0.00021529871,"about_ca_system_score_gemma":0.000106014086,"threshold_uncertainty_score":0.0017327666},"labels":[],"label_agreement":null},{"id":"W2774566339","doi":"10.1172/jci.insight.96882","title":"ICAM1+ neutrophils promote chronic inflammation via ASPRV1 in B cell–dependent autoimmune encephalomyelitis","year":2017,"lang":"en","type":"article","venue":"JCI Insight","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Western University; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Imperial College London; Multiple Sclerosis Society of Canada; University of Pennsylvania; Multiple Sclerosis Society; Université Laval","keywords":"Experimental autoimmune encephalomyelitis; Inflammation; Immunology; Encephalomyelitis; Medicine; Multiple sclerosis","score_opus":0.00937921257057415,"score_gpt":0.23209076622611038,"score_spread":0.22271155365553624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774566339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952832,0.0016012366,0.0012707982,0.00016750427,0.000019601835,0.000016955823,0.00018030808,0.000050928604,0.0014094874],"genre_scores_gemma":[0.9964922,0.0007685184,0.00095853314,0.00007390808,0.000020044417,0.000020134481,0.00020215474,0.000008484466,0.0014558765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998652,0.00003116555,0.000012331251,0.000019759724,0.000029996549,0.000041583142],"domain_scores_gemma":[0.9999193,0.000008084301,0.000030482492,0.000007664229,0.0000074192076,0.000027052854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016348233,0.00036481136,0.0001589454,0.00022609351,0.00016427926,0.0002686782,0.000108051616,0.00030875372,0.0014088027],"category_scores_gemma":[0.00009053428,0.00010762559,0.0001416706,0.000095340874,0.00017541274,0.00024153636,0.00025860118,0.00063849636,0.0003889639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001896834,0.000041464362,0.0008893772,0.00003748723,0.0000032409484,0.00014642005,0.000025514604,0.00003582498,0.99616796,0.00014652663,0.00008071106,0.0022358715],"study_design_scores_gemma":[0.00010488377,0.00097601785,0.090247914,0.000046747806,0.000054969078,0.0028258527,0.00024286249,0.0023112972,0.89539975,0.00063885015,0.0071395515,0.0000112723255],"about_ca_topic_score_codex":0.0001506984,"about_ca_topic_score_gemma":0.00033336424,"teacher_disagreement_score":0.0014088027,"about_ca_system_score_codex":0.00015473961,"about_ca_system_score_gemma":0.00010138736,"threshold_uncertainty_score":0.0047129393},"labels":[],"label_agreement":null},{"id":"W2774987059","doi":"10.4049/jimmunol.1700927","title":"Osteoblasts Are Rapidly Ablated by Virus-Induced Systemic Inflammation following Lymphocytic Choriomeningitis Virus or Pneumonia Virus of Mice Infection in Mice","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Lymphocytic choriomeningitis; Virus; Pneumonia; Inflammation; Virology; Medicine; Immunology; Systemic inflammation; Biology; Immune system; Internal medicine; CD8","score_opus":0.012186932924025218,"score_gpt":0.2490158129047338,"score_spread":0.23682887998070856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774987059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9874298,0.0044937236,0.004076818,0.00020590205,0.0000906023,0.00012630117,0.0010801962,0.00023913932,0.0022574398],"genre_scores_gemma":[0.9866121,0.001880595,0.0035408502,0.00013266505,0.000034223543,0.000230133,0.0008954439,0.00007416732,0.0065998947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994006,0.00007628793,0.000054128854,0.00010838192,0.00019001459,0.00017065658],"domain_scores_gemma":[0.9996766,0.000035773628,0.00012302105,0.000038618517,0.000024783165,0.00010126242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003177883,0.0007461328,0.0004677824,0.0008537113,0.00023806003,0.00052056194,0.00033617887,0.00081066106,0.0018329892],"category_scores_gemma":[0.00020559141,0.00046476937,0.00048143376,0.00022153043,0.00058980775,0.00029324504,0.00041414532,0.0016055363,0.00069324364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016875696,0.000039778188,0.00014860161,0.000023220098,0.000003885418,0.000059074584,0.00001554541,0.000019682657,0.99900573,0.000059607966,0.000018477434,0.00043765735],"study_design_scores_gemma":[0.000083438434,0.001063561,0.0078017507,0.000023542345,0.000024703571,0.00051367877,0.00008542616,0.0006759541,0.98761266,0.00013822701,0.00196835,0.000008726065],"about_ca_topic_score_codex":0.00071933965,"about_ca_topic_score_gemma":0.0015973329,"teacher_disagreement_score":0.0018329892,"about_ca_system_score_codex":0.00035225303,"about_ca_system_score_gemma":0.00034026793,"threshold_uncertainty_score":0.006131947},"labels":[],"label_agreement":null},{"id":"W2779678987","doi":"10.1007/s00109-017-1613-6","title":"Chromogranin-A Regulates Macrophage Function and the Apoptotic Pathway in Murine DSS colitis","year":2017,"lang":"en","type":"article","venue":"Journal of Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; CancerCare Manitoba; Research Institute in Oncology and Hematology; University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Institute of Nutrition, Metabolism and Diabetes; Crohn's and Colitis Canada; Mitacs; Children's Hospital Research Institute of Manitoba; University of Manitoba; Research Manitoba","keywords":"Chromogranin A; Inflammation; Macrophage; Colitis; Apoptosis; Molecular medicine; Cancer research; Inflammatory bowel disease; Immunology; Downregulation and upregulation; Medicine; Biology; Internal medicine; Disease; In vitro; Immunohistochemistry; Cell cycle; Gene; Genetics","score_opus":0.005694897625051351,"score_gpt":0.2230207402926189,"score_spread":0.21732584266756755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2779678987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976814,0.0012069658,0.00045864345,0.000085147265,0.000028806226,0.000008037725,0.000066514935,0.000028470515,0.00043599057],"genre_scores_gemma":[0.99824166,0.00042196552,0.00026729208,0.000030061787,0.000010856801,0.0000125220595,0.00006577311,0.00001024562,0.0009396576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968433,0.000076737524,0.000020831698,0.000039676008,0.00006145533,0.000116893534],"domain_scores_gemma":[0.99964666,0.000026742371,0.00009103047,0.000028024857,0.000029409148,0.00017812096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023374971,0.0003506316,0.000429278,0.00079401693,0.00022918242,0.0005154393,0.00018792925,0.0005863796,0.00068463996],"category_scores_gemma":[0.00019898477,0.0002692498,0.00030552337,0.00024231413,0.00071650854,0.00047239717,0.0002549131,0.0014793503,0.00025286546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033842807,0.0001616822,0.0009793809,0.00003439754,0.000011486582,0.00017274996,0.000024729896,0.000098764336,0.9932334,0.00015581021,0.000042834243,0.0017005268],"study_design_scores_gemma":[0.00022090356,0.00189621,0.043461356,0.000019240992,0.00008607348,0.00048061024,0.00021541193,0.0021181528,0.94972503,0.00039440006,0.001364319,0.00001835316],"about_ca_topic_score_codex":0.00045084348,"about_ca_topic_score_gemma":0.0005257447,"teacher_disagreement_score":0.00079401693,"about_ca_system_score_codex":0.0005485893,"about_ca_system_score_gemma":0.00031076334,"threshold_uncertainty_score":0.003980279},"labels":[],"label_agreement":null},{"id":"W2782754655","doi":"10.1073/pnas.1719834115","title":"Crystal structure of the mammalian lipopolysaccharide detoxifier","year":2018,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; National Institute of General Medical Sciences; Government of Canada","keywords":"Lipid A; Lipopolysaccharide; Innate immune system; Chemistry; Enzyme; Biochemistry; Bacterial outer membrane; Active site; Moiety; Stereochemistry; Receptor; Biology; Escherichia coli; Gene; Immunology","score_opus":0.020000210738858295,"score_gpt":0.2721473379207951,"score_spread":0.2521471271819368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782754655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7543282,0.06419453,0.016188737,0.013361543,0.003456867,0.0005358509,0.03710946,0.004129807,0.10669494],"genre_scores_gemma":[0.77915275,0.021382261,0.029259978,0.0031093652,0.00036369514,0.0006224047,0.12630016,0.0008817289,0.03892756],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997502,0.000030611245,0.000008998436,0.000048236616,0.00011400508,0.000047835685],"domain_scores_gemma":[0.99980277,0.000034643715,0.000022082588,0.000008915725,0.00008174732,0.000049838345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003466334,0.00078082905,0.0011831586,0.0003268755,0.0010520382,0.0015305287,0.0015539977,0.0009498146,0.0108941505],"category_scores_gemma":[0.0007872926,0.00041713123,0.00034425454,0.00070527283,0.00030632658,0.0007165273,0.0005805652,0.002434572,0.0027355473],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047113528,0.0014506025,0.01819268,0.004012554,0.0011522189,0.004803532,0.0014219112,0.023604395,0.372847,0.027290272,0.41582826,0.12468518],"study_design_scores_gemma":[0.0024115748,0.0010915725,0.039227266,0.0005191,0.00075594574,0.0028593487,0.001706633,0.13836992,0.07281682,0.011555165,0.7283556,0.00033107272],"about_ca_topic_score_codex":0.005594056,"about_ca_topic_score_gemma":0.0059184846,"teacher_disagreement_score":0.0108941505,"about_ca_system_score_codex":0.0014096885,"about_ca_system_score_gemma":0.0014601788,"threshold_uncertainty_score":0.036444545},"labels":[],"label_agreement":null},{"id":"W2782851795","doi":"10.1159/000486104","title":"The&lt;b&gt;&lt;i&gt; IL20&lt;/i&gt;&lt;/b&gt; Genetic Polymorphism Is Associated with Altered Clinical Outcome in Septic Shock","year":2018,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Japan Society for the Promotion of Science; Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Septic shock; Polymorphism (computer science); Outcome (game theory); Medicine; Biology; Genetics; Immunology; Sepsis; Genotype; Gene","score_opus":0.02506976960208149,"score_gpt":0.2885080944426777,"score_spread":0.2634383248405962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782851795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99964166,0.000034585682,0.00008982366,0.000022906637,0.000003766334,0.0000042332626,0.00010531306,0.000002215216,0.00009530408],"genre_scores_gemma":[0.99942917,0.000028712024,0.00014092943,0.000038303824,0.000008276991,0.000014874919,0.00016197753,0.000002954209,0.00017494883],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99987197,0.000035580233,0.000013120743,0.00003413061,0.0000144307805,0.00003077724],"domain_scores_gemma":[0.9993529,0.000112286754,0.00030844114,0.000038101618,0.000027689797,0.00016068344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027561525,0.0003596067,0.00020036811,0.000294039,0.00023732826,0.0002202835,0.00020502429,0.0003697893,0.0015476437],"category_scores_gemma":[0.000757481,0.00017306657,0.00022359389,0.00036172036,0.0004120046,0.00014131067,0.00022567353,0.00051771937,0.00033076265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0052602896,0.00026358632,0.9711387,0.000026233884,0.00010129339,0.0004556047,0.00008969853,0.00023141774,0.019291302,0.000049807095,0.00022942136,0.0028626358],"study_design_scores_gemma":[0.00014859567,0.00072533416,0.996738,0.000007525289,0.000055352783,0.00058183103,0.000068803805,0.00030831224,0.001069723,0.00010431676,0.00018463476,0.0000076210854],"about_ca_topic_score_codex":0.0009076764,"about_ca_topic_score_gemma":0.0009157241,"teacher_disagreement_score":0.0015476437,"about_ca_system_score_codex":0.00020350302,"about_ca_system_score_gemma":0.00021523776,"threshold_uncertainty_score":0.0051773787},"labels":[],"label_agreement":null},{"id":"W2783029706","doi":"10.1007/s00441-017-2767-9","title":"Recognizing conserved non-canonical localization patterns of toll-like receptors in tissues and across species","year":2018,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Receptor; Innate immune system; Cell biology; Immune system; Intracellular; Acquired immune system; Toll-like receptor; Endosome; Immunity; Cell type; Immunology; Cell; Genetics","score_opus":0.10209880911846414,"score_gpt":0.3946677529581781,"score_spread":0.29256894383971394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783029706","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016939625,0.99819416,0.00027241712,0.000265399,0.00027483012,0.0000037972227,0.000019595544,0.000007729214,0.0007927523],"genre_scores_gemma":[0.0008663119,0.9977349,0.00026865,0.00018008325,0.00024255141,0.000004774747,0.00003936061,0.0000014070488,0.0006619936],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99980384,0.000022678969,0.0000296594,0.000047487974,0.000071211995,0.000025217232],"domain_scores_gemma":[0.99968266,0.000118639284,0.000070684095,0.000012472344,0.00008108424,0.000034505756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006328401,0.00091422204,0.0010531016,0.0017203384,0.00020843507,0.001179997,0.000973745,0.0011078513,0.0022873743],"category_scores_gemma":[0.000692417,0.00021235418,0.00028169196,0.0017692215,0.00071856816,0.0016630286,0.0008166575,0.0014420769,0.001613495],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008556661,0.000029589393,0.0002280621,0.010350707,0.000042005104,0.00017515787,0.00005602996,0.00016801945,0.007146468,0.003499531,0.014902382,0.96331656],"study_design_scores_gemma":[0.000010869707,0.00007235282,0.0012309295,0.0021259673,0.000075433316,0.0016398611,0.00009296595,0.000054699944,0.0022151608,0.0022040212,0.990254,0.000023724197],"about_ca_topic_score_codex":0.0005862916,"about_ca_topic_score_gemma":0.0008798137,"teacher_disagreement_score":0.0022873743,"about_ca_system_score_codex":0.00048427563,"about_ca_system_score_gemma":0.0009894205,"threshold_uncertainty_score":0.007652104},"labels":[],"label_agreement":null},{"id":"W2783719484","doi":"10.1007/s00441-017-2770-1","title":"Equine neutrophils and their role in ischemia reperfusion injury and lung inflammation","year":2018,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Inflammation; Arachidonic acid; Immunology; Chemotaxis; Neutrophil extracellular traps; Lung; Ischemia; Reperfusion injury; Biology; Medicine; Pathology; Biochemistry; Internal medicine; Receptor","score_opus":0.03450793321925401,"score_gpt":0.35513996750540566,"score_spread":0.32063203428615167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783719484","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015912674,0.99845827,0.00010337624,0.00035382263,0.0003619455,0.00000415357,0.00001415399,0.0000025647453,0.00054257456],"genre_scores_gemma":[0.0011518346,0.9966028,0.00013475971,0.00023825905,0.00069599855,0.000009942534,0.000027428536,7.3628104e-7,0.0011381668],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984145,0.000024063655,0.000031084604,0.000026613136,0.00005918521,0.000017540959],"domain_scores_gemma":[0.9996773,0.00013497089,0.000061720035,0.000008350101,0.0000902119,0.000027403825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060532463,0.00078799174,0.0010081327,0.0014057583,0.00022621168,0.00093895616,0.00055310805,0.0013610979,0.0031158954],"category_scores_gemma":[0.00088254036,0.00019184592,0.00021866594,0.0011758315,0.00060643104,0.0012230729,0.0007941713,0.001323405,0.0011171274],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001396676,0.00005955241,0.00042809057,0.013267743,0.00005328097,0.00040805235,0.00012125462,0.00022887172,0.0035326164,0.0030440993,0.02663406,0.95208263],"study_design_scores_gemma":[0.000021942305,0.00015252113,0.0015953702,0.003727795,0.00011760544,0.0015026776,0.00015036545,0.0000872899,0.0009148886,0.0019150041,0.98979634,0.000018321753],"about_ca_topic_score_codex":0.001001024,"about_ca_topic_score_gemma":0.0022248768,"teacher_disagreement_score":0.0031158954,"about_ca_system_score_codex":0.00038187267,"about_ca_system_score_gemma":0.0012045783,"threshold_uncertainty_score":0.01042372},"labels":[],"label_agreement":null},{"id":"W2784034857","doi":"10.4049/jimmunol.1701212","title":"Staphylococcal Superantigens Use LAMA2 as a Coreceptor To Activate T Cells","year":2018,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Lawson Health Research Institute; Western University; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Superantigen; Cell biology; T-cell receptor; Toxic shock syndrome; Enterotoxin; T cell; G protein-coupled receptor; Tyrosine kinase; Receptor; Chemistry; Signal transduction; Biology; Immunology; Staphylococcus aureus; Biochemistry; Immune system","score_opus":0.01300011610303222,"score_gpt":0.24306763758395483,"score_spread":0.2300675214809226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784034857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9805683,0.008419861,0.0047576325,0.00042556704,0.00006288504,0.000068452995,0.00030671214,0.00014161055,0.005248996],"genre_scores_gemma":[0.99213976,0.0015811486,0.0023914154,0.00024830882,0.00003148642,0.000034836077,0.0003511233,0.000008994209,0.0032130426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999841,0.0000499245,0.000010202821,0.0000220974,0.00003139308,0.000045325913],"domain_scores_gemma":[0.9999577,0.0000068218715,0.000010118522,0.000004570145,0.000008145991,0.000012730017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013019572,0.0004158189,0.0002061819,0.00018311778,0.00015860416,0.00031683236,0.00016464715,0.00031254996,0.0013909314],"category_scores_gemma":[0.00009237144,0.00009283406,0.0003453332,0.00012269635,0.000111222515,0.00022573335,0.00026244842,0.00046613548,0.0005897679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009066405,0.000021654601,0.00036854148,0.000034291534,0.000010936365,0.000108702065,0.000008037359,0.000052105504,0.9971089,0.000070440685,0.000100652316,0.0020250538],"study_design_scores_gemma":[0.00004660715,0.0009692639,0.012631618,0.00001393037,0.000039503742,0.0011491207,0.000073010946,0.0022061656,0.97421455,0.000098923425,0.008547713,0.000009689453],"about_ca_topic_score_codex":0.000517631,"about_ca_topic_score_gemma":0.00075727777,"teacher_disagreement_score":0.0013909314,"about_ca_system_score_codex":0.00032137803,"about_ca_system_score_gemma":0.00016803476,"threshold_uncertainty_score":0.004653156},"labels":[],"label_agreement":null},{"id":"W2787505540","doi":"10.4049/jimmunol.1601018","title":"IL-10 Plays Opposing Roles during <i>Staphylococcus aureus</i> Systemic and Localized Infections","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Trinity College Dublin; Irish Research Council; Science Foundation Ireland","keywords":"Immunology; Biology; Staphylococcus aureus; Proinflammatory cytokine; Immune system; Effector; Adoptive cell transfer; Microbiology; Inflammation; T cell; Bacteria","score_opus":0.008483664687518551,"score_gpt":0.23238886276800255,"score_spread":0.223905198080484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787505540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99565685,0.0017969183,0.0010605277,0.000079434736,0.000026818288,0.00002894554,0.00014757884,0.00005617874,0.0011466787],"genre_scores_gemma":[0.99798274,0.0004777093,0.0004688595,0.000074195814,0.000027236556,0.000027897906,0.0001347818,0.0000068157,0.0007997062],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997545,0.000046530506,0.000015468639,0.000045571207,0.000034876404,0.0001029866],"domain_scores_gemma":[0.99967754,0.000044324213,0.00009803493,0.000023420656,0.00003581387,0.000120834826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002541971,0.0003949103,0.00034417183,0.00018447771,0.00012550627,0.0005382349,0.000115331786,0.00032315508,0.001123604],"category_scores_gemma":[0.00020538979,0.00013814773,0.0002386543,0.00008929193,0.00035503157,0.00028671027,0.0002591733,0.0008007475,0.000313179],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006495905,0.000041788597,0.0013725292,0.00006389508,0.0000048562683,0.000111291614,0.000042819058,0.0000465603,0.9958741,0.00006263408,0.000055966484,0.0016740327],"study_design_scores_gemma":[0.00008991509,0.002804724,0.12489098,0.0000913037,0.000083756066,0.0014237016,0.0006294157,0.0017346463,0.86555994,0.00024873513,0.0024167593,0.000026126214],"about_ca_topic_score_codex":0.0002658579,"about_ca_topic_score_gemma":0.00034385239,"teacher_disagreement_score":0.001123604,"about_ca_system_score_codex":0.0002789483,"about_ca_system_score_gemma":0.00021144461,"threshold_uncertainty_score":0.0037588477},"labels":[],"label_agreement":null},{"id":"W2787933047","doi":"10.1016/j.mayocp.2017.10.023","title":"MyD88 and TLR4 Expression in Epithelial Ovarian Cancer","year":2018,"lang":"en","type":"article","venue":"Mayo Clinic Proceedings","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia; Alberta Health Services; BC Cancer Agency; Royal Alexandra Hospital; University of Calgary","funders":"Medical Research and Materiel Command; National Center for Research Resources; National Cancer Institute; Cancer Research UK Cambridge Institute, University of Cambridge; Instituto de Salud Carlos III; Cancer Council Tasmania; Cancer Council Victoria; National Center for Advancing Translational Sciences; Medical Research Council; Cumming School of Medicine, University of Calgary; Cancer Institute, University of Pittsburgh; Graduate School of Public Health, University of Pittsburgh; National Institutes of Health; Universitätsklinikum Hamburg-Eppendorf; Universitätsklinikum Heidelberg; National Health and Medical Research Council; Universidade de São Paulo; Royal Adelaide Hospital; Nottingham University Hospitals NHS Trust; Cancer Research UK; University of Sydney; Cancer Australia; University of Nottingham; Illawarra Shoalhaven Local Health District; Bundesministerium für Bildung und Forschung; National Institute for Health and Care Research; University of Pittsburgh; Calgary Laboratory Services; University of Cambridge; American Cancer Society; Magee-Womens Research Institute; Cancer Council South Australia; Pomorski Uniwersytet Medyczny W Szczecinie; Deutsches Krebsforschungszentrum; Canadian Institutes of Health Research; Department of Obstetrics, Gynecology and Reproductive Sciences, University of Pittsburgh; Cancer Institute NSW; Kræftens Bekæmpelse; QIMR Berghofer Medical Research Institute; Peter MacCallum Cancer Centre; Cedars-Sinai Medical Center; Conselho Nacional de Desenvolvimento Científico e Tecnológico; University of Western Sydney; Cancer Council NSW; Ovarian Cancer Australia","keywords":"Medicine; Epithelial ovarian cancer; Ovarian cancer; Expression (computer science); Cancer research; Oncology; TLR4; Gynecology; Cancer; Internal medicine","score_opus":0.016954253036514304,"score_gpt":0.28952224939486826,"score_spread":0.27256799635835394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787933047","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944916,0.0029933664,0.00010994262,0.0003367433,0.000034278557,0.0000071260783,0.00014450333,0.000014758019,0.0018678154],"genre_scores_gemma":[0.99743074,0.0007645115,0.0001860574,0.000083274885,0.000023385763,0.000011620872,0.00018117546,0.0000024283822,0.0013167728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99985266,0.000033381046,0.000012506055,0.000016678357,0.000038947794,0.00004578378],"domain_scores_gemma":[0.999905,0.000015518044,0.00002649767,0.0000070125043,0.000022454162,0.00002363639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021830802,0.00008096308,0.00017546696,0.0005152421,0.0003131811,0.00045034927,0.00016277707,0.00026265444,0.0016531299],"category_scores_gemma":[0.00036385082,0.0001654436,0.0001451432,0.00028722844,0.00017057634,0.00018435919,0.00028227267,0.00030209598,0.00018246836],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0073575173,0.00040061248,0.46319506,0.0005339567,0.0001744955,0.0026742478,0.00061472924,0.0006142458,0.4245724,0.0010078342,0.0058595007,0.09299541],"study_design_scores_gemma":[0.00008950517,0.0006458289,0.9481893,0.000044972214,0.00010471082,0.0023313542,0.0010729544,0.0012735118,0.03279561,0.00029578045,0.013143755,0.000012858536],"about_ca_topic_score_codex":0.0017740356,"about_ca_topic_score_gemma":0.003457785,"teacher_disagreement_score":0.0017740356,"about_ca_system_score_codex":0.0006092013,"about_ca_system_score_gemma":0.00032078262,"threshold_uncertainty_score":0.0055302978},"labels":[],"label_agreement":null},{"id":"W2791602863","doi":"10.1038/s41409-018-0156-y","title":"Higher levels of free plasma mitochondrial DNA are associated with the onset of chronic GvHD","year":2018,"lang":"en","type":"article","venue":"Bone Marrow Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Capital District Health Authority; Hôpital de l'Enfant-Jésus; Princess Margaret Cancer Centre; Dalhousie University; University of Toronto; BC Children's Hospital; Hamilton Health Sciences; Centre hospitalier de l'Université Laval; McMaster University; University of British Columbia","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Mitochondrial DNA; TLR9; Medicine; Internal medicine; CpG site; Immunology; Endocrinology; Biology; Gene; Genetics; Gene expression; DNA methylation","score_opus":0.012091595204239386,"score_gpt":0.21482827916769068,"score_spread":0.2027366839634513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791602863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974721,0.0013338507,0.00041425248,0.000052466567,0.000019043659,0.0000060678767,0.00020736904,0.000021114374,0.00047369135],"genre_scores_gemma":[0.9991831,0.00023125882,0.00018144114,0.000019887117,0.000026161271,0.000003605471,0.00016133986,0.0000035145385,0.00018968285],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971277,0.00006351943,0.000030941104,0.00005841335,0.000068946785,0.00006531175],"domain_scores_gemma":[0.9972838,0.00038396363,0.0017138649,0.00009472892,0.00012017417,0.00040347254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028808715,0.0003332635,0.00044769997,0.0010864725,0.00022243227,0.0006244408,0.00022893216,0.00052364665,0.002613208],"category_scores_gemma":[0.0014972079,0.00018431051,0.00020309284,0.0010976013,0.00029164075,0.00028043173,0.0002585489,0.00080879347,0.00029739115],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002625062,0.00015572202,0.93933606,0.00011032051,0.00015439928,0.00077497656,0.00009677405,0.00007556101,0.04643641,0.00008719509,0.00013576943,0.010011941],"study_design_scores_gemma":[0.000010893107,0.00030741046,0.99504685,0.000010747302,0.000051168176,0.0016569323,0.0000705688,0.00011164822,0.0023466456,0.00010515482,0.00027664684,0.0000054585057],"about_ca_topic_score_codex":0.0002739368,"about_ca_topic_score_gemma":0.00023383509,"teacher_disagreement_score":0.002613208,"about_ca_system_score_codex":0.00016552472,"about_ca_system_score_gemma":0.00016869554,"threshold_uncertainty_score":0.008742094},"labels":[],"label_agreement":null},{"id":"W2792612645","doi":"10.1111/imm.12924","title":"Murine neutrophils treated with alphaB‐crystallin reduce <scp>IL</scp>‐12p40 production by dendritic cells","year":2018,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Brain Institute; University of Calgary","funders":"Institute of Neurosciences, Mental Health and Addiction; Canadian Institutes of Health Research; Alberta Innovates - Health Solutions","keywords":"Immune system; Chemokine; Neutrophil extracellular traps; Proteases; Immunology; Cell biology; Biology; Inflammation; Antimicrobial peptides; Heat shock protein; Microbiology; Antimicrobial","score_opus":0.006479747126581079,"score_gpt":0.21090418611696635,"score_spread":0.20442443899038526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792612645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946274,0.0012773538,0.0017620793,0.00022775735,0.0001261321,0.00006896365,0.0005651027,0.000081381186,0.001263883],"genre_scores_gemma":[0.9936133,0.00066853844,0.0016014867,0.00015142122,0.000042261996,0.00010025547,0.0007890536,0.000021797016,0.0030119496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965394,0.000069623544,0.000046094778,0.00006214957,0.00006336177,0.0001047658],"domain_scores_gemma":[0.9997845,0.000036515616,0.000056025616,0.000027565193,0.000026306852,0.00006898988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028255297,0.0004334602,0.00040602274,0.00025717338,0.00012698151,0.00025475564,0.00021301021,0.0005602922,0.0017185974],"category_scores_gemma":[0.00015228897,0.00016618546,0.00036987656,0.00014398433,0.0002486496,0.00025385778,0.00015614115,0.0009994126,0.0006291677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080440746,0.00012961979,0.00013991498,0.000032034477,0.00000534609,0.000048712624,0.000022138354,0.000059248247,0.99800104,0.000053063104,0.000060086586,0.0006444045],"study_design_scores_gemma":[0.0000842427,0.0015924535,0.0021902584,0.000007814241,0.000015951362,0.0001162055,0.000029601993,0.0006819281,0.9940931,0.00004320744,0.0011402578,0.0000049531027],"about_ca_topic_score_codex":0.0004855856,"about_ca_topic_score_gemma":0.00047606096,"teacher_disagreement_score":0.0017185974,"about_ca_system_score_codex":0.0002243359,"about_ca_system_score_gemma":0.00021315627,"threshold_uncertainty_score":0.005749345},"labels":[],"label_agreement":null},{"id":"W2792668629","doi":"10.1093/jcag/gwy009.166","title":"A166 THE LONG-LIVED ANTI-COLITIC EFFECT OF ADOPTIVE TRANSFER OF INTERLEUKIN-4 EDUCATED MACROPHAGES","year":2018,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Colitis; Adoptive cell transfer; Histopathology; Interleukin 4; Interleukin; Immunology; Trophy; Interleukin 10; Chemistry; Pharmacology; Internal medicine; Medicine; Cytokine; Pathology; T cell; Immune system","score_opus":0.004754453244976439,"score_gpt":0.21607458305470228,"score_spread":0.21132012980972584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792668629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99493814,0.0012354526,0.0022393547,0.00018301193,0.000104835846,0.00003885761,0.00019404087,0.00006490988,0.0010014212],"genre_scores_gemma":[0.99276537,0.00072831847,0.0021424075,0.00012466584,0.000056511377,0.0000729806,0.0002932752,0.00001125467,0.0038052024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998204,0.000031214156,0.000016506656,0.00003612217,0.00003587239,0.00005990023],"domain_scores_gemma":[0.9998294,0.000027582339,0.000047694884,0.000030686948,0.000021067895,0.000043565065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002582897,0.0005439485,0.00034709126,0.00019004765,0.00012049822,0.000270819,0.00019018578,0.00037983907,0.0015082383],"category_scores_gemma":[0.00014378922,0.00012775052,0.00028081753,0.000064809385,0.00025794492,0.00022885029,0.0001887503,0.0012216571,0.00032748532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003611543,0.00018444777,0.00020351424,0.000053404645,0.000007208761,0.000056738405,0.000017516213,0.00006887894,0.996345,0.00007879091,0.00004045629,0.0025827524],"study_design_scores_gemma":[0.00014945335,0.0046887198,0.004054389,0.000020809715,0.000042082025,0.00026879396,0.00003480007,0.00078901177,0.98718333,0.000084548155,0.0026788535,0.0000051552875],"about_ca_topic_score_codex":0.00013433839,"about_ca_topic_score_gemma":0.00028543195,"teacher_disagreement_score":0.0015082383,"about_ca_system_score_codex":0.00012410354,"about_ca_system_score_gemma":0.00019095842,"threshold_uncertainty_score":0.005045533},"labels":[],"label_agreement":null},{"id":"W2793513183","doi":"10.1089/vim.2017.0195","title":"Reduction of Marek's Disease Virus Infection by Toll-Like Receptor Ligands in Chicken Embryo Fibroblast Cells","year":2018,"lang":"en","type":"article","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; Canadian Food Inspection Agency","keywords":"TLR3; Marek's disease; Biology; Toll-like receptor; TLR2; Interferon; TLR9; TLR4; Receptor; Virus; Virology; Molecular biology; IRF7; Cell biology; Immunology; Innate immune system; Immune system; Gene expression; Gene; Genetics","score_opus":0.004756072206094681,"score_gpt":0.21530244454999983,"score_spread":0.21054637234390516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793513183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99380326,0.001981334,0.0020540515,0.00009486571,0.000045534736,0.000052766693,0.0004744724,0.0000297345,0.0014640483],"genre_scores_gemma":[0.9896728,0.0011873246,0.0052241483,0.00007940072,0.000013626822,0.000100739206,0.0008359391,0.00001115785,0.0028748785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998068,0.00004501808,0.000028667295,0.000034769397,0.000048949685,0.000035758843],"domain_scores_gemma":[0.99990153,0.000030388026,0.000015946798,0.000015448444,0.000020313877,0.000016341537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017839544,0.00036550933,0.0002913809,0.00014589373,0.0001237062,0.00020939297,0.00013187324,0.0002834555,0.0006718606],"category_scores_gemma":[0.00012832264,0.00011457227,0.0003071627,0.000099002886,0.0001136166,0.00014773334,0.0001375191,0.00040521089,0.00028473965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059518414,0.00001749693,0.0000931502,0.000028882216,0.0000019694205,0.000021289648,0.000015863274,0.00002296178,0.9992673,0.000014999166,0.00001394732,0.00044260034],"study_design_scores_gemma":[0.000015173764,0.00072588807,0.004644372,0.0000076036395,0.000010789897,0.00010946563,0.000046755158,0.000558119,0.99225664,0.000013316884,0.0016068056,0.0000051905154],"about_ca_topic_score_codex":0.0010431842,"about_ca_topic_score_gemma":0.0014583402,"teacher_disagreement_score":0.0010431842,"about_ca_system_score_codex":0.0001917499,"about_ca_system_score_gemma":0.00014195242,"threshold_uncertainty_score":0.0022476315},"labels":[],"label_agreement":null},{"id":"W2793541038","doi":"10.3389/fimmu.2018.00132","title":"Contribution of Regulatory T Cells in Nucleotide-Binding Oligomerization Domain 2 Response to Influenza Virus Infection","year":2018,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Immunology; Inflammation; NOD2; Chemokine; Influenza A virus; Immune system; Muramyl dipeptide; Biology; Virus; Medicine; Innate immune system","score_opus":0.005530887666765805,"score_gpt":0.22934362735209451,"score_spread":0.22381273968532872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793541038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911281,0.0049099005,0.00084518024,0.0001639221,0.00019599251,0.00012240489,0.00009919278,0.00006631129,0.002468886],"genre_scores_gemma":[0.99443465,0.0019888899,0.0010969687,0.00027783655,0.00026154594,0.00013829958,0.00013070546,0.00001536785,0.0016558314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972576,0.00009949841,0.000024470606,0.000040277933,0.000040211304,0.00006983603],"domain_scores_gemma":[0.9998388,0.000025208523,0.00002998958,0.000015351106,0.000017366803,0.0000731725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002848374,0.00050580746,0.00044961536,0.00030153545,0.00014759535,0.00024799778,0.00019508062,0.0005456018,0.0012004881],"category_scores_gemma":[0.0003002331,0.00017000706,0.000335136,0.0000632301,0.00025847866,0.00015270193,0.00019998735,0.0008997632,0.00029499593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002488762,0.00047942708,0.0027442044,0.0002677223,0.000018950463,0.001013507,0.00013484215,0.00016947355,0.97914803,0.00016791718,0.00017805072,0.013189138],"study_design_scores_gemma":[0.0024098563,0.023775555,0.22136255,0.00043062284,0.00059644686,0.009150626,0.0012770717,0.0090843,0.70165247,0.0015758995,0.028582701,0.000101929676],"about_ca_topic_score_codex":0.00014024161,"about_ca_topic_score_gemma":0.00024325676,"teacher_disagreement_score":0.0012004881,"about_ca_system_score_codex":0.00013500912,"about_ca_system_score_gemma":0.00020181072,"threshold_uncertainty_score":0.0040160418},"labels":[],"label_agreement":null},{"id":"W2794236364","doi":"10.3410/f.732682253.793542785","title":"Faculty Opinions recommendation of Lipopolysaccharide is transported to the cell surface by a membrane-to-membrane protein bridge.","year":2018,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Lipopolysaccharide; Membrane; Bridge (graph theory); Cell; Chemistry; Membrane protein; Cell biology; Biochemistry; Biology; Medicine; Immunology; Internal medicine","score_opus":0.01965383222361832,"score_gpt":0.30946279078360817,"score_spread":0.28980895855998984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794236364","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034249757,0.00028960698,0.00006513184,0.00014093629,0.000038850292,0.000011264065,0.9981623,0.00024617516,0.00070323335],"genre_scores_gemma":[0.0010857341,0.00023655465,0.00028307212,0.00011077909,0.00001711961,0.000053889726,0.99725974,0.00004023329,0.0009129057],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987519,0.00019709895,0.00017955565,0.0004002985,0.00031890636,0.00015226589],"domain_scores_gemma":[0.99733585,0.00089807046,0.00042478685,0.0005115183,0.0005213987,0.00030838925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011863557,0.0022755458,0.0016912936,0.002998553,0.0007069386,0.0025707884,0.0025970568,0.0026694858,0.04172783],"category_scores_gemma":[0.009277734,0.00060156954,0.0018364744,0.004715332,0.00036253873,0.0012832498,0.0015099706,0.001530321,0.049400285],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027745424,0.000045197146,0.005253607,0.0023026387,0.0001552804,0.000057678073,0.000026672193,0.00034237147,0.0001977967,0.00042112128,0.98499423,0.005925908],"study_design_scores_gemma":[0.00051488867,0.000044078308,0.015998885,0.00085621007,0.00021316146,0.0001571901,0.00006777401,0.0008627204,0.00055452547,0.0014156004,0.9792753,0.00003956176],"about_ca_topic_score_codex":0.0196368,"about_ca_topic_score_gemma":0.046728153,"teacher_disagreement_score":0.04172783,"about_ca_system_score_codex":0.0012465625,"about_ca_system_score_gemma":0.0024731406,"threshold_uncertainty_score":0.13959354},"labels":[],"label_agreement":null},{"id":"W2794292421","doi":"10.3389/fimmu.2018.00309","title":"Polymorphisms in Toll-Like Receptor 10 and Tuberculosis Susceptibility: Evidence from Three Independent Series","year":2018,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"Specialized Research Fund for the Doctoral Program of Higher Education of China; National Natural Science Foundation of China","keywords":"Tuberculosis; Toll-like receptor; Series (stratigraphy); Medicine; Immunology; Biology; Immune system; Innate immune system; Pathology","score_opus":0.010841749098647265,"score_gpt":0.2229549848286025,"score_spread":0.21211323572995522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794292421","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968849,0.0012870656,0.0006066141,0.000063249565,0.000044221306,0.000035987476,0.00037025637,0.00000965388,0.0006980924],"genre_scores_gemma":[0.9977496,0.00047175473,0.000297744,0.000098641394,0.000057326917,0.000036447236,0.000869921,0.000012194517,0.00040633391],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99749917,0.00088298664,0.0002938494,0.0006709881,0.00048320316,0.00016979943],"domain_scores_gemma":[0.99223524,0.003551787,0.0014434987,0.0011407906,0.00093539787,0.0006932036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004064627,0.0009943709,0.00067218114,0.00138884,0.00076270767,0.0008325942,0.00095327833,0.0009943177,0.0041939192],"category_scores_gemma":[0.0065448065,0.0004154508,0.0014834357,0.001515036,0.0009928471,0.00025241548,0.00061429426,0.00076214614,0.00041892286],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003983975,0.00020825984,0.9816658,0.00010538355,0.0023545262,0.0009420903,0.00063963333,0.00012263273,0.003084597,0.00013070868,0.0003024227,0.006459975],"study_design_scores_gemma":[0.00027659693,0.00047146084,0.99505335,0.00003613666,0.0009546695,0.0014085929,0.00018853352,0.0002719236,0.0005121018,0.00013550078,0.0006698662,0.000021347321],"about_ca_topic_score_codex":0.004402409,"about_ca_topic_score_gemma":0.0028155406,"teacher_disagreement_score":0.004402409,"about_ca_system_score_codex":0.00028922016,"about_ca_system_score_gemma":0.00041762358,"threshold_uncertainty_score":0.021496117},"labels":[],"label_agreement":null},{"id":"W2794339928","doi":"10.3390/ph11010022","title":"A Novel Interaction Between the TLR7 and a Colchicine Derivative Revealed Through a Computational and Experimental Study","year":2018,"lang":"en","type":"article","venue":"Pharmaceuticals","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"TLR7; Colchicine; Receptor; Chemistry; Cell biology; Biology; Stereochemistry; Biochemistry; Innate immune system; Toll-like receptor; Genetics","score_opus":0.0785558479204005,"score_gpt":0.40647957568364407,"score_spread":0.3279237277632436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794339928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96285796,0.0012876015,0.010425337,0.0006739547,0.00011437927,0.00006654539,0.0013598376,0.00020286231,0.023011493],"genre_scores_gemma":[0.98828274,0.0005907395,0.008087995,0.0001418436,0.00003092574,0.000096856864,0.0009848479,0.000043668388,0.0017404078],"study_design_codex":"simulation_or_modeling","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998684,0.000023005456,0.0000040958557,0.000022670574,0.000034037916,0.000047758414],"domain_scores_gemma":[0.99970007,0.00018264048,0.000026738802,0.000017216516,0.00004430949,0.00002905976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023520287,0.00074603397,0.0012029714,0.000481582,0.0008727322,0.00091062725,0.0011562658,0.001221457,0.008081791],"category_scores_gemma":[0.0005346653,0.00036240587,0.0009388286,0.00052597024,0.00054370903,0.00065567135,0.00040523583,0.00069901795,0.00029879564],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005186957,0.00034089212,0.00341513,0.00066340034,0.00016315615,0.00088285876,0.00006240696,0.9662574,0.012557734,0.007164399,0.0017202653,0.0062537263],"study_design_scores_gemma":[0.00010505846,0.00022300982,0.0007910216,0.000018419605,0.00006873691,0.00006231,0.00006055214,0.9935493,0.0024673722,0.00137413,0.0012632922,0.000016763199],"about_ca_topic_score_codex":0.012310987,"about_ca_topic_score_gemma":0.010768936,"teacher_disagreement_score":0.012310987,"about_ca_system_score_codex":0.0008697444,"about_ca_system_score_gemma":0.0011429258,"threshold_uncertainty_score":0.02703631},"labels":[],"label_agreement":null},{"id":"W2794873819","doi":"10.1016/j.healun.2018.01.303","title":"Heart Transplant Tolerance Induction in Mice: Understanding the Complex Interplay Between Tolerizing Cells and Host Immune System by Systematic Depletion of Effector Cells","year":2018,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Effector; Immune system; Spleen; Host (biology); Immune tolerance; Immunology; Biology; Bone marrow; Cell biology; Genetics","score_opus":0.013687480761654252,"score_gpt":0.25064649256747723,"score_spread":0.236959011805823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794873819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9636024,0.005606605,0.027978396,0.000857831,0.00010753718,0.00006460305,0.00028234845,0.00022575793,0.0012745097],"genre_scores_gemma":[0.9829931,0.0031054174,0.011068891,0.00047809375,0.00007839906,0.00008401484,0.00022638687,0.00008628256,0.0018793287],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973434,0.000049368384,0.000029037652,0.00006809128,0.00004852246,0.00007058138],"domain_scores_gemma":[0.9997739,0.00003589474,0.000098983604,0.000034348937,0.00001266648,0.00004420176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065917784,0.00069438387,0.0004608213,0.00048412607,0.0001876714,0.00071108155,0.0005282261,0.0007713499,0.00075325515],"category_scores_gemma":[0.00022564945,0.00034539722,0.00034840842,0.00014399571,0.00085831323,0.00092262134,0.0003781466,0.0021526138,0.0002237709],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026794404,0.00007099045,0.00053706195,0.00006982601,0.000008401066,0.00005877025,0.000031015734,0.00023178209,0.9952259,0.0007843155,0.00004749471,0.002666497],"study_design_scores_gemma":[0.00013479302,0.00095281814,0.0063917325,0.000066708104,0.0001245074,0.00052169565,0.00013240226,0.0057694754,0.9808928,0.0018282745,0.003163775,0.00002100397],"about_ca_topic_score_codex":0.00015171226,"about_ca_topic_score_gemma":0.00050625164,"teacher_disagreement_score":0.0007713499,"about_ca_system_score_codex":0.0002571204,"about_ca_system_score_gemma":0.0002840087,"threshold_uncertainty_score":0.0034861565},"labels":[],"label_agreement":null},{"id":"W2794877328","doi":"10.2460/ajvr.79.4.424","title":"Role of toll-like receptor 4 and caspase-3, -8, and -9 in lipopolysaccharide-induced delay of apoptosis in equine neutrophils","year":2018,"lang":"en","type":"article","venue":"American Journal of Veterinary Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Saskatchewan; American College of Surgeons","keywords":"Apoptosis; Lipopolysaccharide; TLR4; Propidium iodide; Annexin; Immunology; Caspase; Incubation; Flow cytometry; Medicine; Andrology; Inflammation; Biology; Programmed cell death; Biochemistry","score_opus":0.042596266313253,"score_gpt":0.3467476838807368,"score_spread":0.30415141756748376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794877328","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9812323,0.014558713,0.0031141038,0.000119836164,0.000032292617,0.0000830259,0.00018481493,0.000028504819,0.0006463983],"genre_scores_gemma":[0.99333715,0.002251757,0.0029522164,0.00006043446,0.000021605363,0.00012076136,0.00024310673,0.000003616546,0.0010094244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945945,0.00021639583,0.00007567395,0.000060097198,0.00009759382,0.00009083481],"domain_scores_gemma":[0.9995758,0.000063765925,0.00017470038,0.00002876958,0.00010693794,0.000050045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051481946,0.0004755956,0.00040541586,0.00037132844,0.00016547028,0.00030278743,0.00024175592,0.00050589564,0.0015988528],"category_scores_gemma":[0.00059633615,0.00016199822,0.0003565389,0.00011218413,0.00029179512,0.0004625163,0.00028555767,0.00040254588,0.000418827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031536978,0.00017597179,0.004286653,0.0004481272,0.000029478933,0.0003390027,0.00008742453,0.00018738674,0.98231745,0.00009729342,0.000055165998,0.00882231],"study_design_scores_gemma":[0.0001622263,0.0057265786,0.057556648,0.00009485154,0.00009009547,0.0018754485,0.00025249398,0.0016579669,0.9293344,0.00020668816,0.0030232603,0.000019346382],"about_ca_topic_score_codex":0.00016932629,"about_ca_topic_score_gemma":0.00021866093,"teacher_disagreement_score":0.0015988528,"about_ca_system_score_codex":0.00030487013,"about_ca_system_score_gemma":0.00023303607,"threshold_uncertainty_score":0.005348742},"labels":[],"label_agreement":null},{"id":"W2794994884","doi":"10.1016/j.cyto.2018.03.017","title":"Lymphocytic choriomeningitis virus infection of dendritic cells interferes with TLR-induced IL-12/IL-23 cytokine production in an IL-10 independent manner","year":2018,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Lymphocytic choriomeningitis; Proinflammatory cytokine; Cytokine; Biology; Immunology; Virus; Virology; Immune system; Microbiology; Inflammation; CD8","score_opus":0.01490532834326199,"score_gpt":0.24332807984567428,"score_spread":0.22842275150241229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794994884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909594,0.0018052966,0.0015830613,0.0003611218,0.00028042615,0.00008164292,0.0005439156,0.000076495904,0.004308621],"genre_scores_gemma":[0.9938684,0.0010511641,0.0013642855,0.00013074084,0.00006140237,0.000103782186,0.00051011454,0.000016676184,0.0028934611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999501,0.00010856972,0.00004935747,0.000053104755,0.00008279865,0.0002052388],"domain_scores_gemma":[0.999843,0.000041672334,0.000022111884,0.00003615366,0.000017738124,0.00003920283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027351608,0.0005526751,0.00035789047,0.00024209039,0.00026165516,0.00059533445,0.00027332816,0.00050152314,0.0015900854],"category_scores_gemma":[0.00025756328,0.00016746277,0.00035881804,0.00015230842,0.00039094305,0.00028771357,0.0002633209,0.0012795341,0.0006733798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007409228,0.00017881264,0.000186392,0.000048812868,0.000009718087,0.00011074389,0.000023092114,0.000076834076,0.99739933,0.00013248129,0.000099451354,0.000993343],"study_design_scores_gemma":[0.00014455429,0.00085442496,0.0029779929,0.000012698288,0.000027125949,0.00023680927,0.00007241731,0.0008983369,0.9913976,0.00008711809,0.003284034,0.0000068551526],"about_ca_topic_score_codex":0.00086659595,"about_ca_topic_score_gemma":0.0012820996,"teacher_disagreement_score":0.0015900854,"about_ca_system_score_codex":0.000373219,"about_ca_system_score_gemma":0.00050748995,"threshold_uncertainty_score":0.0053192973},"labels":[],"label_agreement":null},{"id":"W2795143622","doi":"10.12688/wellcomeopenres.12941.1","title":"Distinct behavior of myelomonocytic cells and CD8 T cells underlies the hepatic response to Listeria monocytogenes","year":2018,"lang":"en","type":"preprint","venue":"Wellcome Open Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Allergy and Infectious Diseases; National Institutes of Health; National Cancer Institute; Kennedy Trust for Rheumatology Research; Wellcome Trust; Wellcome","keywords":"Biology; Immune system; Spleen; Antigen; Immunology","score_opus":0.13056527423097358,"score_gpt":0.38548215691842286,"score_spread":0.2549168826874493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795143622","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99741757,0.00019936718,0.0009267757,0.00008257839,0.000010916853,0.000019453026,0.00030210157,0.000057591424,0.0009836743],"genre_scores_gemma":[0.99609154,0.00016480603,0.0011866061,0.00007854739,0.000012823378,0.00006613414,0.000347151,0.000027977436,0.0020243793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998301,0.000023672066,0.000016174352,0.000043321943,0.000027149996,0.00005943358],"domain_scores_gemma":[0.9998503,0.000020425854,0.000041042535,0.000013543377,0.0000136705075,0.000061021005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012363614,0.00028422868,0.00015258491,0.00026172702,0.00015706276,0.00028135002,0.00017424618,0.00035003058,0.0017819471],"category_scores_gemma":[0.00015989729,0.00024917454,0.00017540004,0.00008303187,0.00028156978,0.00016563729,0.00028242398,0.00074108026,0.0005261204],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002576917,0.00002775172,0.0012179607,0.000022805116,0.000002359596,0.000073714735,0.000025734136,0.00003796207,0.99750227,0.00008283814,0.000062564766,0.0006863225],"study_design_scores_gemma":[0.00009125369,0.00077468687,0.14202279,0.000027590586,0.00003856558,0.0010527008,0.00035945105,0.003111558,0.8494206,0.00026406342,0.0028179216,0.000018779148],"about_ca_topic_score_codex":0.00045759825,"about_ca_topic_score_gemma":0.00077214075,"teacher_disagreement_score":0.0017819471,"about_ca_system_score_codex":0.000278864,"about_ca_system_score_gemma":0.00015470995,"threshold_uncertainty_score":0.0059611797},"labels":[],"label_agreement":null},{"id":"W2797535195","doi":"10.3389/fvets.2018.00057","title":"Anti-Inflammatory Benefits of Antibiotics: Tylvalosin Induces Apoptosis of Porcine Neutrophils and Macrophages, Promotes Efferocytosis, and Inhibits Pro-Inflammatory CXCL-8, IL1α, and LTB4 Production, While Inducing the Release of Pro-Resolving Lipoxin A4 and Resolvin D1","year":2018,"lang":"en","type":"article","venue":"Frontiers in Veterinary Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canterbury Medical Research Foundation; University of Calgary","keywords":"Efferocytosis; Leukotriene B4; Inflammation; Apoptosis; Proinflammatory cytokine; Tumor necrosis factor alpha; Chemokine; Lipid signaling; Immunology; Necrosis; Chemistry; Respiratory burst; Phospholipase A2; Biology; Macrophage; Pharmacology; Biochemistry; In vitro; Enzyme","score_opus":0.014870811857261496,"score_gpt":0.230915176527678,"score_spread":0.21604436467041652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2797535195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99588794,0.002628715,0.0007946583,0.000057186076,0.000015315489,0.000016520053,0.00008400751,0.000016646922,0.0004990482],"genre_scores_gemma":[0.9966273,0.0014782054,0.0008304821,0.00004407407,0.000010470307,0.000013635085,0.00012950151,0.0000036263486,0.0008627277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998934,0.000025888414,0.000014708043,0.000019530888,0.000022036558,0.000024464465],"domain_scores_gemma":[0.99991095,0.000014194334,0.000038725608,0.0000083161685,0.000012371666,0.000015344398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011775424,0.0002266614,0.00019730687,0.00012983705,0.00007073377,0.0002231677,0.000099062476,0.0002563765,0.00062065147],"category_scores_gemma":[0.00011671438,0.00006607552,0.00019619163,0.00008551505,0.000148668,0.00017599578,0.00012859616,0.00030963126,0.00013063732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001831795,0.000025837217,0.0002316116,0.00004066975,0.0000032389996,0.000028409042,0.000007672011,0.000016573376,0.99846715,0.000007434068,0.000005716959,0.0009825742],"study_design_scores_gemma":[0.00001955194,0.0020558366,0.009138881,0.0000127688445,0.000016594737,0.00023264198,0.000040310384,0.0001949875,0.9871043,0.000013182943,0.001168246,0.0000026386815],"about_ca_topic_score_codex":0.00030803308,"about_ca_topic_score_gemma":0.0005457243,"teacher_disagreement_score":0.00062065147,"about_ca_system_score_codex":0.00011472478,"about_ca_system_score_gemma":0.00014343948,"threshold_uncertainty_score":0.0020763278},"labels":[],"label_agreement":null},{"id":"W2802209999","doi":"10.15761/gimci.1000152","title":"Lipopolysaccharide, structure and biological effects","year":2018,"lang":"en","type":"article","venue":"General Internal Medicine and Clinical Innovations","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipopolysaccharide; Medicine; Immunology","score_opus":0.042086283324746725,"score_gpt":0.3599072439222469,"score_spread":0.31782096059750015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802209999","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.059603836,0.9010136,0.0032123392,0.0029685677,0.0014030024,0.00010707975,0.00065424497,0.00007592056,0.030961286],"genre_scores_gemma":[0.4796955,0.47176757,0.0032399304,0.0017671764,0.0017992764,0.00017334524,0.0008789319,0.00002838014,0.04064979],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99979776,0.000041855335,0.00001733991,0.000025287089,0.00007744722,0.000040368668],"domain_scores_gemma":[0.9998374,0.00002149925,0.000035965277,0.0000086192385,0.00004915074,0.000047377063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040051888,0.00051770086,0.0003680817,0.0008750511,0.00040016335,0.0011749458,0.00031649874,0.0007568986,0.004476928],"category_scores_gemma":[0.00033032967,0.00014268293,0.00026798825,0.0006454244,0.00050773675,0.000700632,0.0006212821,0.0009157621,0.0014057182],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013431289,0.0005894055,0.003045462,0.005765954,0.00008930658,0.002294666,0.00038796748,0.0010159849,0.5836012,0.03535141,0.008843811,0.35767174],"study_design_scores_gemma":[0.00011281518,0.0033503575,0.02986855,0.0016406851,0.00017235646,0.0067131585,0.0009089822,0.00066909986,0.22606999,0.029804131,0.7005637,0.00012614884],"about_ca_topic_score_codex":0.0006752676,"about_ca_topic_score_gemma":0.00033514877,"teacher_disagreement_score":0.004476928,"about_ca_system_score_codex":0.00046624415,"about_ca_system_score_gemma":0.00046572997,"threshold_uncertainty_score":0.014976859},"labels":[],"label_agreement":null},{"id":"W2804311153","doi":"10.1186/s12882-018-0867-8","title":"No difference in renal injury and fibrosis between wild-type and NOD1/NOD2 double knockout mice with chronic kidney disease induced by ureteral obstruction","year":2018,"lang":"en","type":"article","venue":"BMC Nephrology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; Nierstichting; ZonMw","keywords":"Medicine; Fibrosis; Kidney disease; NOD1; Inflammation; Acute kidney injury; Pathogenesis; Kidney; Nephropathy; NOD2; Internal medicine; Nephrology; Pathology; Endocrinology; Receptor; Innate immune system","score_opus":0.010546957447974353,"score_gpt":0.23094016317642407,"score_spread":0.22039320572844973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804311153","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949273,0.0008444698,0.002210205,0.00009328923,0.0000452733,0.000043842072,0.00072292844,0.00009832383,0.0010144153],"genre_scores_gemma":[0.9891155,0.00078133866,0.0038983123,0.00014165288,0.000026675249,0.00019945741,0.0013214919,0.00010593265,0.0044096243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990036,0.00008479401,0.00013833224,0.00037057578,0.00022513168,0.00017754166],"domain_scores_gemma":[0.99828255,0.000101825906,0.0005882086,0.00012763526,0.000098506214,0.00080128416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005309051,0.00078723603,0.00095574145,0.0011993501,0.00033747716,0.00058286,0.00037460096,0.001161712,0.0037165706],"category_scores_gemma":[0.0003701201,0.0004922872,0.00057494064,0.0003874802,0.0009698919,0.00083479873,0.0005183941,0.0011921814,0.0005671851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018934717,0.0003410234,0.0025856155,0.00015869841,0.00003693628,0.0003923215,0.00009662076,0.00004208323,0.99297124,0.00017342843,0.000048723727,0.0012599092],"study_design_scores_gemma":[0.0004234047,0.0054850616,0.12541053,0.00010928522,0.0003016981,0.009773592,0.00044620415,0.0012934984,0.8516632,0.0005837359,0.0044369404,0.00007284542],"about_ca_topic_score_codex":0.0001694408,"about_ca_topic_score_gemma":0.00028774512,"teacher_disagreement_score":0.0037165706,"about_ca_system_score_codex":0.00023129265,"about_ca_system_score_gemma":0.00027214008,"threshold_uncertainty_score":0.012433112},"labels":[],"label_agreement":null},{"id":"W2806236985","doi":"10.1016/j.vetimm.2018.06.006","title":"Expression of pattern recognition receptors in porcine uterine epithelial cells in vivo and in culture","year":2018,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Saskatchewan Health Research Foundation; University of Saskatchewan; Department of Veterinary Microbiology, Western College of Veterinary Medicine, University of Saskatchewan","keywords":"Biology; TLR2; TLR9; TLR3; Innate immune system; Cell biology; Pattern recognition receptor; NOD1; TLR4; Immune system; Receptor; In vivo; Toll-like receptor; Signal transduction; Immunology; NOD2; Gene expression","score_opus":0.012445320081977605,"score_gpt":0.24620448261358863,"score_spread":0.23375916253161103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806236985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9820025,0.004359679,0.0050515993,0.00027863373,0.000112194815,0.00006243034,0.00080649724,0.000038732025,0.0072877877],"genre_scores_gemma":[0.97731483,0.0031096265,0.0046041356,0.00021977734,0.00007611784,0.000098786215,0.0030647449,0.000031956944,0.01148011],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99950576,0.00015077612,0.000054003678,0.00007598792,0.000064977445,0.00014861334],"domain_scores_gemma":[0.99962175,0.00019198142,0.000032065574,0.00007417576,0.000039286515,0.000040634233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005185471,0.00022216477,0.00031958666,0.0002751057,0.00033851215,0.0007539145,0.00034481916,0.0004187761,0.0017837995],"category_scores_gemma":[0.00039382253,0.000315436,0.0004769899,0.00027603417,0.00035029178,0.0005551071,0.00030142453,0.00088989513,0.00089372194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014477124,0.000035668072,0.00026037186,0.000038014623,0.0000040110167,0.00009500018,0.00010197378,0.000049223017,0.9981623,0.00014535991,0.000050241888,0.0009130438],"study_design_scores_gemma":[0.00003828308,0.0010323409,0.022663683,0.00003078433,0.000050149018,0.0006787149,0.0006902248,0.0021356826,0.96580195,0.00014568715,0.0067127706,0.000019676132],"about_ca_topic_score_codex":0.0013370005,"about_ca_topic_score_gemma":0.0013736339,"teacher_disagreement_score":0.0017837995,"about_ca_system_score_codex":0.00031748155,"about_ca_system_score_gemma":0.000257821,"threshold_uncertainty_score":0.0059673786},"labels":[],"label_agreement":null},{"id":"W2806675295","doi":"10.1186/s12985-018-0954-2","title":"Potential mediators of in ovo delivered double stranded (ds) RNA-induced innate response against low pathogenic avian influenza virus infection","year":2018,"lang":"en","type":"article","venue":"Virology Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Canadian Poultry Research Council; University of Calgary","keywords":"In ovo; Biology; TLR3; Virology; Interferon; RNA silencing; Innate immune system; Virus; Interferon type I; Influenza A virus subtype H5N1; Immunology; RNA; Toll-like receptor; Embryo; Immune system; RNA interference; Gene; Cell biology","score_opus":0.010600302958336964,"score_gpt":0.2523605012311528,"score_spread":0.2417601982728158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806675295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917463,0.0042170156,0.0017127472,0.00014354865,0.0001055217,0.000090164496,0.00038550078,0.000027950497,0.0015711386],"genre_scores_gemma":[0.99233925,0.0020901156,0.001912717,0.00018714128,0.000042275562,0.00015316883,0.0005490493,0.000011474611,0.002714923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999045,0.000016627542,0.0000073156616,0.00001863296,0.000021057664,0.000031834963],"domain_scores_gemma":[0.99987626,0.000024608633,0.000051544463,0.0000066405396,0.000015988742,0.000025018007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015643396,0.00031645017,0.00023209478,0.0001498644,0.000107952445,0.00026505563,0.00014391281,0.0003504598,0.001538049],"category_scores_gemma":[0.00013094449,0.00008483466,0.00023605252,0.00004116267,0.00022057608,0.00017858588,0.0001636559,0.00045439045,0.00025376945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003335223,0.000047231035,0.00042333957,0.00015211452,0.00000446052,0.00009169774,0.000023828821,0.000022412405,0.99785894,0.00003533146,0.000031587664,0.0009755557],"study_design_scores_gemma":[0.00007507455,0.002912195,0.020778637,0.00007062616,0.000064948064,0.00056934624,0.00026211693,0.00044429855,0.97065914,0.00010918106,0.004046355,0.000008118791],"about_ca_topic_score_codex":0.000106557934,"about_ca_topic_score_gemma":0.00018828582,"teacher_disagreement_score":0.001538049,"about_ca_system_score_codex":0.00015169983,"about_ca_system_score_gemma":0.00012723338,"threshold_uncertainty_score":0.0051452518},"labels":[],"label_agreement":null},{"id":"W2806881856","doi":"10.1089/vim.2017.0142","title":"Double-Stranded Ribonucleic Acid-Mediated Antiviral Response Against Low Pathogenic Avian Influenza Virus Infection","year":2018,"lang":"en","type":"article","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; South Health Campus","funders":"University of Guelph; Canadian Poultry Research Council","keywords":"TLR3; RNA silencing; Biology; Virology; Proinflammatory cytokine; Interferon; Virus; Immune system; Influenza A virus subtype H5N1; Innate immune system; Microbiology; RNA; Immunology; Toll-like receptor; Inflammation; RNA interference; Gene","score_opus":0.012384147045703451,"score_gpt":0.2541243497392509,"score_spread":0.24174020269354746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806881856","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98919547,0.004036627,0.0033519382,0.00011706121,0.000087504384,0.00008726246,0.00045593767,0.00005248999,0.002615758],"genre_scores_gemma":[0.99204344,0.0011883471,0.00437013,0.00012173665,0.00002047027,0.00005803227,0.00050817494,0.0000062252616,0.0016835906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986744,0.00003141266,0.000016695345,0.000029863888,0.000029546212,0.00002505243],"domain_scores_gemma":[0.9999279,0.000015148251,0.00002032577,0.000007864965,0.000014520521,0.000014215328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016325877,0.00031267962,0.00022565096,0.00013246217,0.00012446499,0.00016909509,0.0001248425,0.00028843313,0.0011694863],"category_scores_gemma":[0.00008221593,0.00006313635,0.00031206195,0.000047422353,0.00014183146,0.00012339222,0.00014337972,0.00034465006,0.00028403118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003403252,0.000008137801,0.00010364056,0.000054668824,0.0000019876652,0.00002203991,0.0000062314753,0.000016572165,0.9992619,0.000010080487,0.000010762795,0.00046979214],"study_design_scores_gemma":[0.00001882684,0.000889818,0.00961371,0.000026148455,0.000021548345,0.00040156554,0.00006825803,0.0005532097,0.9861984,0.000045486046,0.0021561915,0.000006835956],"about_ca_topic_score_codex":0.0002896291,"about_ca_topic_score_gemma":0.000475154,"teacher_disagreement_score":0.0011694863,"about_ca_system_score_codex":0.00012373108,"about_ca_system_score_gemma":0.00011220575,"threshold_uncertainty_score":0.00391227},"labels":[],"label_agreement":null},{"id":"W2809336329","doi":"10.1016/j.jpba.2018.06.025","title":"27Al and 31P NMR spectroscopy method development to quantify aluminum phosphate in adjuvanted vaccine formulations","year":2018,"lang":"en","type":"article","venue":"Journal of Pharmaceutical and Biomedical Analysis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); York University","funders":"Mitacs; University of Toronto; York University; Sanofi Pasteur; Government of Ontario","keywords":"Chemistry; Phosphate; Nuclear magnetic resonance spectroscopy; Aluminium; Spectroscopy; Organic chemistry","score_opus":0.020121570973167996,"score_gpt":0.3574482952809244,"score_spread":0.33732672430775645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809336329","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14856046,0.0059862,0.8337369,0.00063247554,0.00040676235,0.0011885201,0.00087343826,0.0014692986,0.007145996],"genre_scores_gemma":[0.2819342,0.005033794,0.7010794,0.00043174846,0.00014216453,0.0010709647,0.0006542039,0.00022087457,0.009432627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886525,0.0002982555,0.00005694684,0.00020453146,0.0005137322,0.000061360726],"domain_scores_gemma":[0.9993333,0.00016138611,0.00007815302,0.000073704825,0.00030342516,0.000050039114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026384776,0.0008816372,0.0003634908,0.0009801507,0.00039886884,0.0008637638,0.0008365394,0.000925023,0.001500382],"category_scores_gemma":[0.0015043876,0.00043784897,0.00042405128,0.00032439287,0.00042516252,0.00081351853,0.00092484587,0.0010004301,0.0011931749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005005808,0.000046705827,0.00018334108,0.00012904947,0.000015658718,0.000045425477,0.000038835653,0.00023922608,0.98079294,0.00046824483,0.00028238495,0.017708179],"study_design_scores_gemma":[0.000023416998,0.00030857115,0.00042684018,0.0000250077,0.000025071673,0.00031972694,0.000043673514,0.0052349027,0.9843576,0.00029494622,0.008913391,0.000026720516],"about_ca_topic_score_codex":0.0006888223,"about_ca_topic_score_gemma":0.00181826,"teacher_disagreement_score":0.0026384776,"about_ca_system_score_codex":0.00043184,"about_ca_system_score_gemma":0.0014781182,"threshold_uncertainty_score":0.013953745},"labels":[],"label_agreement":null},{"id":"W2810177515","doi":"10.1139/bcb-2017-0339","title":"Carnosol suppresses interleukin-6 production in mouse lungs injured by ischemia–reperfusion operation and in RAW264.7 macrophages treated with lipopolysaccharide","year":2018,"lang":"en","type":"article","venue":"Biochemistry and Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Reactive oxygen species; Lipopolysaccharide; Ischemia; Gene knockdown; Reperfusion injury; Proinflammatory cytokine; Ex vivo; Chemistry; Hypoxia (environmental); Pharmacology; Biology; Molecular biology; Immunology; Inflammation; Medicine; Oxygen; Biochemistry; Gene; In vitro; Internal medicine","score_opus":0.003204009612900909,"score_gpt":0.20404836375927538,"score_spread":0.20084435414637447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810177515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926843,0.002638436,0.0029055115,0.00025873608,0.000094567156,0.0000468909,0.00049118634,0.0001285234,0.0007517534],"genre_scores_gemma":[0.990167,0.0017576588,0.0038632147,0.00019460062,0.000048427453,0.00018450581,0.00083281426,0.000041452626,0.0029103302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997584,0.0000495004,0.00003430127,0.000043150318,0.000039260158,0.00007536136],"domain_scores_gemma":[0.9997986,0.000019950157,0.000061761195,0.000025897392,0.000027271206,0.00006652792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035777656,0.00073923264,0.0005253807,0.00044620794,0.00021206404,0.00021869116,0.0002353231,0.0004225113,0.0011177714],"category_scores_gemma":[0.00015972723,0.00022600061,0.00045875984,0.00022981195,0.00043159944,0.00035653362,0.00021804529,0.0009162609,0.0002717359],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007998879,0.00009977371,0.00011380799,0.00006481419,0.000006167176,0.000041750955,0.000023304998,0.000023721466,0.99824846,0.00003392846,0.000027048143,0.0005173416],"study_design_scores_gemma":[0.00007301251,0.0012440265,0.0024874634,0.00000875438,0.00002893952,0.000092228,0.0000434679,0.00041836966,0.9947417,0.000054702305,0.00080122007,0.0000061241676],"about_ca_topic_score_codex":0.00033523474,"about_ca_topic_score_gemma":0.000601268,"teacher_disagreement_score":0.0011177714,"about_ca_system_score_codex":0.00017552434,"about_ca_system_score_gemma":0.0002972772,"threshold_uncertainty_score":0.0037392974},"labels":[],"label_agreement":null},{"id":"W2810843485","doi":"10.1002/9781119070153.ch8","title":"Class‐Related Proinflammatory Effects","year":2018,"lang":"en","type":"other","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Proinflammatory cytokine; Immune system; Immunology; Pharmacology; Innate immune system; Drug; Medicine; Biology; Computational biology; Inflammation","score_opus":0.003127771796202408,"score_gpt":0.20258869547627895,"score_spread":0.19946092368007654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810843485","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032651637,0.8279862,0.007965501,0.0034068117,0.005164769,0.00034371178,0.0016543415,0.00050046743,0.12032659],"genre_scores_gemma":[0.1273636,0.7432938,0.0059891045,0.0034220086,0.0042247763,0.0002834089,0.0017110843,0.00012078305,0.11359147],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997733,0.000035100824,0.000018754141,0.000033383392,0.000098502715,0.000041010222],"domain_scores_gemma":[0.99985385,0.000029344581,0.00004200616,0.0000069502353,0.00004396665,0.000023933888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025907301,0.0005284648,0.0003628726,0.0004898095,0.00034430035,0.00076968817,0.00023028311,0.00039873406,0.016831905],"category_scores_gemma":[0.0002736053,0.00011233485,0.00037914937,0.00026422727,0.00019269838,0.00044594344,0.00041571108,0.00077625085,0.0039642863],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047690107,0.0002148294,0.001175427,0.0062081493,0.000077152574,0.0008427443,0.00018052585,0.00029231427,0.29655418,0.012214129,0.04054425,0.64121944],"study_design_scores_gemma":[0.000028977709,0.0005855565,0.002473872,0.000542237,0.00009158649,0.0033732092,0.000090095746,0.00013004942,0.06993432,0.0017285437,0.92099947,0.00002207232],"about_ca_topic_score_codex":0.00021047707,"about_ca_topic_score_gemma":0.0005078166,"teacher_disagreement_score":0.016831905,"about_ca_system_score_codex":0.0003724974,"about_ca_system_score_gemma":0.00038570806,"threshold_uncertainty_score":0.05630833},"labels":[],"label_agreement":null},{"id":"W2869439706","doi":"10.1038/s41598-018-28777-0","title":"Low-density lipoprotein (LDL)-dependent uptake of Gram-positive lipoteichoic acid and Gram-negative lipopolysaccharide occurs through LDL receptor","year":2018,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute; McMaster University; Thrombosis and Atherosclerosis Research Institute","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Government of Canada; McMaster University","keywords":"Lipoteichoic acid; Gram; LDL receptor; Lipopolysaccharide; Gram-negative bacteria; Microbiology; Low-density lipoprotein; Lipoprotein; Chemistry; Biology; Bacteria; Cholesterol; Biochemistry; Immunology; Staphylococcus aureus; Escherichia coli; Gene; Genetics","score_opus":0.00998616335704496,"score_gpt":0.23951300651662172,"score_spread":0.22952684315957675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2869439706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880805,0.0038768414,0.0061794934,0.00016303931,0.00004492257,0.00003616328,0.00042984643,0.000112891605,0.001076386],"genre_scores_gemma":[0.9950063,0.0013485209,0.0018346187,0.00005830025,0.000015109214,0.000023450466,0.000308271,0.000010707622,0.0013947311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997681,0.00003795299,0.00003051502,0.000047305206,0.00006985804,0.00004629107],"domain_scores_gemma":[0.9998456,0.000019069175,0.00006192517,0.000017560178,0.000024475781,0.00003134796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010131478,0.00030002053,0.0003349945,0.00021302867,0.00013516266,0.00032291884,0.00010860375,0.00019355725,0.0010804974],"category_scores_gemma":[0.00018311516,0.00009849891,0.00036973553,0.00013728262,0.00019050467,0.00015682794,0.00025080796,0.00044850862,0.00038767824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008144281,0.000029638055,0.002557655,0.0000772794,0.000020258522,0.00019993015,0.000018226385,0.0000665484,0.9917746,0.00006942293,0.000062219515,0.0043097627],"study_design_scores_gemma":[0.00004684522,0.00070908596,0.07249314,0.000013531794,0.000043563807,0.0013620475,0.00006571224,0.0022862677,0.9205483,0.00013755412,0.0022822998,0.000011647871],"about_ca_topic_score_codex":0.00079086545,"about_ca_topic_score_gemma":0.0005670443,"teacher_disagreement_score":0.0010804974,"about_ca_system_score_codex":0.00028504524,"about_ca_system_score_gemma":0.00018435394,"threshold_uncertainty_score":0.0036146045},"labels":[],"label_agreement":null},{"id":"W2883099048","doi":"10.1177/1352458518791683","title":"Multiple sclerosis disease progression: Contributions from a hypoxia–inflammation cycle","year":2018,"lang":"en","type":"article","venue":"Multiple Sclerosis Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Multiple sclerosis; Hypoxia (environmental); Medicine; Inflammation; Disease; Neuroscience; Pathology; Internal medicine; Psychology; Immunology; Chemistry; Oxygen","score_opus":0.035066947406308224,"score_gpt":0.25354632373801106,"score_spread":0.21847937633170283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883099048","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5960281,0.3190885,0.019695098,0.02368368,0.0017835554,0.00053789775,0.0011917468,0.00047335812,0.03751806],"genre_scores_gemma":[0.9348972,0.051264297,0.0037365593,0.0016052698,0.0013034377,0.00015416976,0.00026670788,0.000033252163,0.0067391363],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996594,0.000100524994,0.000021465108,0.00004982436,0.00007917033,0.000089672474],"domain_scores_gemma":[0.9993899,0.000115407034,0.00015244528,0.000027528124,0.00013513774,0.00017956208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005532483,0.00040830384,0.00077986496,0.0006246051,0.00049599056,0.0013034095,0.00032107974,0.00073272677,0.0023193946],"category_scores_gemma":[0.00062719913,0.00020273859,0.00036242194,0.0002838376,0.00052517623,0.0009671393,0.00094392494,0.00087714853,0.00033733516],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0064302287,0.00172765,0.07910856,0.0038394856,0.0005998135,0.004678568,0.0027401727,0.0033726534,0.4244666,0.054699417,0.018147925,0.40018883],"study_design_scores_gemma":[0.00070757064,0.008355236,0.64926845,0.0016453777,0.00077124476,0.006734956,0.0031216023,0.011789071,0.07095702,0.08661346,0.15979482,0.00024117448],"about_ca_topic_score_codex":0.0007941622,"about_ca_topic_score_gemma":0.0011114241,"teacher_disagreement_score":0.0023193946,"about_ca_system_score_codex":0.00071358617,"about_ca_system_score_gemma":0.0007117162,"threshold_uncertainty_score":0.007759154},"labels":[],"label_agreement":null},{"id":"W2885231949","doi":"10.1016/j.humimm.2018.08.007","title":"IL-8 analogue CXCL8 (3-72) K11R/G31P, modulates LPS-induced inflammation via AKT1-NF-kβ and ERK1/2-AP-1 pathways in THP-1 monocytes","year":2018,"lang":"en","type":"article","venue":"Human Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"National Natural Science Foundation of China","keywords":"Inflammation; Chemokine; Chemistry; CXC chemokine receptors; NF-κB; Receptor; Interleukin 8; Lipopolysaccharide; THP1 cell line; Signal transduction; IκBα; Molecular biology; Endocrinology; Internal medicine; Chemokine receptor; Biology; Biochemistry; Cell culture; Medicine","score_opus":0.02089079123228367,"score_gpt":0.24355774863348442,"score_spread":0.22266695740120074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885231949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946955,0.0014073037,0.00064034626,0.00036868788,0.00008438778,0.000031334,0.0008396909,0.00006971716,0.0018629081],"genre_scores_gemma":[0.9940871,0.0009544991,0.0012359647,0.00011036791,0.000035756664,0.000061339895,0.00071558356,0.000011031955,0.0027882475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998148,0.00003601506,0.000015845877,0.000024864055,0.00003611239,0.00007235029],"domain_scores_gemma":[0.9999541,0.0000066070575,0.0000115292,0.000006889516,0.0000054104544,0.000015429629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014546672,0.00030850802,0.00025621057,0.00015297723,0.00020428785,0.00027854863,0.00022698038,0.00027148263,0.002846187],"category_scores_gemma":[0.00012807533,0.00014017905,0.00016995358,0.00012995026,0.00023137449,0.00023990887,0.00014041945,0.0006942592,0.000767371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00241264,0.00023145776,0.0003429259,0.000090910085,0.000009270572,0.00016708554,0.000021053887,0.00017538457,0.99267006,0.000119255186,0.0003800039,0.0033799978],"study_design_scores_gemma":[0.0007483168,0.0024169974,0.01307123,0.000029866103,0.000058113023,0.00057927414,0.000119670694,0.001960803,0.9754877,0.00019193756,0.005320209,0.000015889626],"about_ca_topic_score_codex":0.00072858384,"about_ca_topic_score_gemma":0.0012033754,"teacher_disagreement_score":0.002846187,"about_ca_system_score_codex":0.00020322923,"about_ca_system_score_gemma":0.00037944567,"threshold_uncertainty_score":0.009521425},"labels":[],"label_agreement":null},{"id":"W2885790208","doi":"10.1016/j.cellsig.2018.08.001","title":"Tie2 signalling through Erk1/2 regulates TLR4 driven inflammation","year":2018,"lang":"en","type":"article","venue":"Cellular Signalling","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Hospital for Sick Children; University of Guelph; University of Toronto; SickKids Foundation; Sunnybrook Hospital","funders":"Canadian Institutes of Health Research; Cancer Research Society","keywords":"TLR4; Angiopoietin receptor; Inflammation; Receptor tyrosine kinase; Cell biology; Lipopolysaccharide; Biology; Receptor; Downregulation and upregulation; Signal transduction; Immunology; Biochemistry","score_opus":0.015307101712675877,"score_gpt":0.22682061828650407,"score_spread":0.2115135165738282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885790208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98293096,0.0039315694,0.0028782524,0.000615022,0.0001699598,0.00003867618,0.0006036184,0.000086780725,0.008745258],"genre_scores_gemma":[0.98718435,0.001824731,0.0015084592,0.00013065623,0.00006994145,0.00004566694,0.0006002901,0.000024865412,0.008611166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977034,0.000038208378,0.000010422704,0.000024293116,0.000051429168,0.00010527782],"domain_scores_gemma":[0.99990773,0.000008178783,0.000028276187,0.000007061837,0.000014633121,0.00003416541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020168183,0.00036135537,0.00020058641,0.00032407325,0.00035558912,0.0007707202,0.00031461156,0.0003707628,0.0041858917],"category_scores_gemma":[0.00019718877,0.00021769838,0.0002939255,0.00015687835,0.00024268178,0.00053684536,0.00041954473,0.001356779,0.001020986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013884992,0.00013634343,0.0010055266,0.00015531118,0.000025245954,0.00022814704,0.000041892188,0.00035726803,0.9890407,0.0012293445,0.000546393,0.005845284],"study_design_scores_gemma":[0.00022075871,0.0007041638,0.04688759,0.00006174764,0.000083824685,0.0009917505,0.00048328002,0.0069652116,0.92154515,0.0016347975,0.020384917,0.00003672644],"about_ca_topic_score_codex":0.00025527985,"about_ca_topic_score_gemma":0.0006623173,"teacher_disagreement_score":0.0041858917,"about_ca_system_score_codex":0.00037303293,"about_ca_system_score_gemma":0.00023328904,"threshold_uncertainty_score":0.014003158},"labels":[],"label_agreement":null},{"id":"W2886812832","doi":"10.1016/j.virusres.2018.08.008","title":"Toll-like receptor (TLR)4 signalling induces myeloid differentiation primary response gene (MYD) 88 independent pathway in avian species leading to type I interferon production and antiviral response","year":2018,"lang":"en","type":"article","venue":"Virus Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Agriculture and Agri-Food Canada; Alberta Livestock and Meat Agency; Canadian Poultry Research Council","keywords":"Biology; TLR4; Interferon; Toll-like receptor; Receptor; Signal transduction; Lipopolysaccharide; Interferon type I; Cell biology; Immunology; Innate immune system; Genetics","score_opus":0.05398403947859807,"score_gpt":0.3129025149781896,"score_spread":0.2589184754995915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886812832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99499595,0.0010783888,0.0011918123,0.00010834414,0.000041847103,0.000021009759,0.0004043941,0.000029803592,0.0021283627],"genre_scores_gemma":[0.9926623,0.0004914852,0.0015705522,0.00009487091,0.000013437014,0.000025216637,0.00075304665,0.000009391772,0.00437962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998945,0.000013359988,0.0000076048614,0.000029598905,0.000016288024,0.000038513568],"domain_scores_gemma":[0.99992406,0.0000055460305,0.000027061496,0.0000058113087,0.0000130043245,0.000024516436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010811202,0.00019790472,0.00012096182,0.00023780708,0.00026356857,0.00027099517,0.00014110572,0.00029456284,0.0017381965],"category_scores_gemma":[0.000080652004,0.00021273375,0.00024584273,0.00005650009,0.00021806193,0.00022392136,0.00024534983,0.0005149907,0.0004846675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019802303,0.000012295054,0.0018980692,0.00004808326,0.0000043155255,0.00011100196,0.000032725522,0.000030883362,0.99648726,0.00009997577,0.00008104782,0.0009963912],"study_design_scores_gemma":[0.0000687442,0.0010838162,0.39313766,0.00007919037,0.00006644097,0.0017822024,0.0008213458,0.0017472665,0.5931646,0.00042484622,0.007592158,0.00003165964],"about_ca_topic_score_codex":0.0008001366,"about_ca_topic_score_gemma":0.0018729914,"teacher_disagreement_score":0.0017381965,"about_ca_system_score_codex":0.0002979133,"about_ca_system_score_gemma":0.00016702981,"threshold_uncertainty_score":0.0058148503},"labels":[],"label_agreement":null},{"id":"W2887908790","doi":"10.1016/j.xphs.2018.08.005","title":"Protective Efficacy of Candidate Vaccines Prior to Human Clinical Trials","year":2018,"lang":"en","type":"article","venue":"Journal of Pharmaceutical Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"Sanofi Pasteur","keywords":"Clinical trial; Vaccine efficacy; Medicine; Immunization; Clinical efficacy; Human use; Immunology; Pharmacology; Vaccination; Biotechnology; Biology; Pathology; Immune system; Internal medicine","score_opus":0.1816586250549008,"score_gpt":0.5165153955090942,"score_spread":0.3348567704541934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887908790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8971157,0.03989103,0.014224763,0.0037226258,0.0023101196,0.006424246,0.002628168,0.0005084716,0.033174798],"genre_scores_gemma":[0.98124105,0.005352483,0.002890251,0.00097637106,0.00043652044,0.0014365582,0.0016584374,0.000047349353,0.0059609506],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981375,0.0009817423,0.00011645016,0.00012880986,0.00026586346,0.0003696105],"domain_scores_gemma":[0.9981294,0.00072094373,0.0002609997,0.00031251583,0.0002606694,0.000315382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004941166,0.0006793477,0.0011619865,0.00041540724,0.0004223752,0.0015550673,0.0004408121,0.0011214659,0.009460549],"category_scores_gemma":[0.004566751,0.00027062336,0.000695769,0.00025435202,0.00061856094,0.0010704099,0.00042822066,0.0025428643,0.0024314346],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.13424233,0.018245237,0.008616419,0.0026170262,0.0006004955,0.000565512,0.00046098503,0.0030147594,0.312794,0.007844945,0.017187733,0.49381056],"study_design_scores_gemma":[0.019215068,0.42785138,0.02870268,0.0011399434,0.0011969276,0.0012719764,0.00030956606,0.0024696537,0.35180515,0.004606044,0.16134706,0.000084511455],"about_ca_topic_score_codex":0.00016565861,"about_ca_topic_score_gemma":0.00025134443,"teacher_disagreement_score":0.009460549,"about_ca_system_score_codex":0.00048763352,"about_ca_system_score_gemma":0.0012160642,"threshold_uncertainty_score":0.031648636},"labels":[],"label_agreement":null},{"id":"W2892200813","doi":"10.1089/vim.2018.0072","title":"A Comparison of Toll-Like Receptor 5 and 21 Ligands as Adjuvants for a Formaldehyde Inactivated H9N2 Avian Influenza Virus Vaccine in Chickens","year":2018,"lang":"en","type":"article","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"Flagellin; TLR5; Adjuvant; CpG Oligodeoxynucleotide; Immune system; Inactivated vaccine; Vaccination; Antibody; Virology; Biology; Virus; Immunopotentiator; CpG site; Toll-like receptor; Immunology; Microbiology; Receptor; Innate immune system; Gene","score_opus":0.017030133578257084,"score_gpt":0.31225655546297365,"score_spread":0.2952264218847166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892200813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99787164,0.0012405791,0.0003769411,0.000027974294,0.00003101212,0.00002937715,0.000057430956,0.0000065216873,0.00035844353],"genre_scores_gemma":[0.99546033,0.0011035624,0.00197905,0.00004820116,0.000016296626,0.000039973278,0.00021005308,0.000004561625,0.0011380683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988806,0.000030329711,0.0000107136675,0.0000149059515,0.000026860898,0.000029106222],"domain_scores_gemma":[0.9998971,0.000020153342,0.000018533348,0.0000046322107,0.000022769835,0.00003686348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023555341,0.00033485462,0.00031757448,0.0002296306,0.00008341574,0.00019497314,0.00020344656,0.0002661912,0.00046671904],"category_scores_gemma":[0.00018675192,0.00013146356,0.0002984728,0.000072293,0.000103746126,0.00024328085,0.00015033945,0.00028795918,0.00011298178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002498789,0.00044057315,0.00053827494,0.00016942031,0.000029181014,0.000030641346,0.00002561592,0.00046816206,0.98939705,0.00004601522,0.000044331853,0.0063119936],"study_design_scores_gemma":[0.00025905052,0.0384894,0.0062832506,0.00004778121,0.00016184305,0.00013640124,0.00007183146,0.0021254746,0.9488938,0.000045601588,0.003466185,0.000019358951],"about_ca_topic_score_codex":0.0005585129,"about_ca_topic_score_gemma":0.0011303137,"teacher_disagreement_score":0.0005585129,"about_ca_system_score_codex":0.00015592332,"about_ca_system_score_gemma":0.00025734823,"threshold_uncertainty_score":0.0015612841},"labels":[],"label_agreement":null},{"id":"W2892956160","doi":"10.1074/jbc.ra118.003501","title":"The effects of CD14 and IL-27 on induction of endotoxin tolerance in human monocytes and macrophages","year":2018,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research; Canada Foundation for Innovation; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"CD14; Monocyte; Immunology; Biology; Microbiology; Immune system","score_opus":0.0098458575648561,"score_gpt":0.24398990818827093,"score_spread":0.23414405062341484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892956160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936287,0.0036502688,0.0011067457,0.00010261047,0.00005477759,0.00006487164,0.00013932443,0.000015933845,0.0012368442],"genre_scores_gemma":[0.99433666,0.0020036933,0.0016918775,0.00012915407,0.000036388887,0.00010524726,0.0003615341,0.000006910493,0.0013285792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999765,0.00009304136,0.000024115616,0.000020868138,0.000036622245,0.00006040556],"domain_scores_gemma":[0.9998652,0.000035977493,0.000016460284,0.000019571542,0.000023849647,0.000038912527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033945014,0.00028047664,0.00026424212,0.00016040825,0.00016796157,0.00020622811,0.0001440828,0.00019216008,0.00088077993],"category_scores_gemma":[0.00022083492,0.00014164753,0.00023360355,0.00012651522,0.0002402978,0.000092881884,0.00019865888,0.00039418798,0.000356948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00475029,0.00043450596,0.0006571408,0.00015772806,0.000015994683,0.00018477847,0.000060901453,0.00014314758,0.9883748,0.00016229582,0.00010983328,0.004948594],"study_design_scores_gemma":[0.00048370627,0.0042889733,0.008964194,0.000022883054,0.00005784835,0.00032787697,0.00006943503,0.00075497734,0.9810961,0.000076444405,0.003848042,0.000009493499],"about_ca_topic_score_codex":0.00039461118,"about_ca_topic_score_gemma":0.00055553816,"teacher_disagreement_score":0.00088077993,"about_ca_system_score_codex":0.00014157839,"about_ca_system_score_gemma":0.00039431333,"threshold_uncertainty_score":0.002946496},"labels":[],"label_agreement":null},{"id":"W2896114422","doi":"10.1371/journal.pone.0205521","title":"CXCL4 contributes to host defense against acute Pseudomonas aeruginosa lung infection","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Dalhousie University","funders":"Fundamental Research Funds for the Central Universities; University of Illinois at Urbana-Champaign; Peking Union Medical College; Chinese Academy of Medical Sciences; Chinese Academy of Sciences; Natural Science Foundation of Yunnan Province; National Natural Science Foundation of China; Academy of Medical Sciences","keywords":"Pseudomonas aeruginosa; Chemokine; Microbiology; Platelet; Immunology; Biology; Bacterial pneumonia; Lung; Platelet activation; Inflammation; Medicine; Bacteria; Antibiotics","score_opus":0.016394882908435555,"score_gpt":0.23081089593995877,"score_spread":0.21441601303152322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896114422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96975446,0.016328858,0.0050543696,0.0011477437,0.00017030888,0.00011442058,0.00075468776,0.0004289111,0.006246211],"genre_scores_gemma":[0.98650163,0.0045933425,0.0024824757,0.00017828564,0.00009087817,0.00007785262,0.0006886653,0.0000310217,0.0053558303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999782,0.000066880384,0.00001694808,0.000020706133,0.000041238683,0.00007218932],"domain_scores_gemma":[0.99981385,0.000021181955,0.000051395953,0.000015065963,0.000037833302,0.00006075267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024837023,0.00046411587,0.00030191918,0.00061085867,0.00027293182,0.00049547077,0.0002798068,0.0004866224,0.0025653704],"category_scores_gemma":[0.00023878245,0.00015444524,0.00030188353,0.00020930395,0.00033495136,0.00032590158,0.00055010983,0.0007373207,0.0005295779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016550269,0.00014324901,0.004732737,0.0004384473,0.00003479331,0.0008069831,0.00006972184,0.00054020796,0.96978,0.0011359954,0.0012632986,0.019399539],"study_design_scores_gemma":[0.00046972907,0.0033636473,0.13196349,0.00019521202,0.0004006648,0.005887221,0.0005260882,0.01239356,0.76489604,0.0036676629,0.07614305,0.00009359419],"about_ca_topic_score_codex":0.0005905292,"about_ca_topic_score_gemma":0.00045100614,"teacher_disagreement_score":0.0025653704,"about_ca_system_score_codex":0.00045667685,"about_ca_system_score_gemma":0.0004962324,"threshold_uncertainty_score":0.008582056},"labels":[],"label_agreement":null},{"id":"W2896487003","doi":"10.1139/cjpp-2018-0027","title":"Two indole-2-carboxamide derivatives attenuate lipopolysaccharide-induced acute lung injury by inhibiting inflammatory response","year":2018,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Lipopolysaccharide; Bronchoalveolar lavage; Medicine; Pharmacology; In vivo; Sepsis; Lung; Inflammation; Immunology; Cytokine; Internal medicine; Biology","score_opus":0.009262010338549235,"score_gpt":0.2737996612900038,"score_spread":0.2645376509514546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896487003","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98027277,0.012684974,0.0032700754,0.00025749468,0.00010969531,0.00014496777,0.00036471072,0.00016270138,0.0027326178],"genre_scores_gemma":[0.98916656,0.004969235,0.003209282,0.00014309281,0.00003155839,0.0000734498,0.00037365314,0.000011424886,0.0020217537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995625,0.0000072374705,0.000004086964,0.0000063358657,0.00001150404,0.00001460479],"domain_scores_gemma":[0.9999474,0.0000040361138,0.000014821868,0.0000035913897,0.00000688415,0.000023284072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008891366,0.0004096934,0.00023961946,0.0003937989,0.00014392941,0.00017792368,0.00024625045,0.0002779761,0.0012028246],"category_scores_gemma":[0.00008534895,0.00008509068,0.00023822214,0.00016247405,0.0001644515,0.00020943012,0.00011879058,0.00060146896,0.00018081591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011631998,0.0008297241,0.00030349655,0.0002526387,0.000021032065,0.00018990226,0.00003156525,0.00021544454,0.9816813,0.0001656978,0.00023068154,0.014915299],"study_design_scores_gemma":[0.0007038418,0.013610689,0.010850457,0.00004560564,0.00010873664,0.00067266467,0.000055353445,0.0010853199,0.96201676,0.000098068005,0.010725768,0.00002681997],"about_ca_topic_score_codex":0.00084114296,"about_ca_topic_score_gemma":0.0020968395,"teacher_disagreement_score":0.0012028246,"about_ca_system_score_codex":0.00016860999,"about_ca_system_score_gemma":0.0003028657,"threshold_uncertainty_score":0.00402385},"labels":[],"label_agreement":null},{"id":"W2896987298","doi":"10.3233/ch-189320","title":"Inhibition of GPR 55 improves dysregulated immune response in experimental sepsis","year":2018,"lang":"en","type":"article","venue":"Clinical Hemorheology and Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Sepsis; Intravital microscopy; Immune system; Proinflammatory cytokine; Microcirculation; Medicine; Cytokine; Immunology; Inflammation; Tumor necrosis factor alpha; Systemic inflammatory response syndrome; Internal medicine","score_opus":0.018928928470292657,"score_gpt":0.31440678790284105,"score_spread":0.2954778594325484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896987298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99630547,0.00161649,0.0008607786,0.00018867878,0.000074492404,0.000035939236,0.00010693302,0.00007997502,0.00073122577],"genre_scores_gemma":[0.9958097,0.0019500462,0.0009271079,0.00020740918,0.000027126418,0.000049155777,0.0002243336,0.000008574747,0.00079638365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988556,0.000026832055,0.000011698046,0.000013884449,0.000014475525,0.00004764037],"domain_scores_gemma":[0.99995065,0.0000062333447,0.00001460028,0.0000065249747,0.000004554832,0.000017467983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019071712,0.00034697895,0.0007050474,0.00022564213,0.00013739223,0.00022352354,0.00023253092,0.0003315355,0.0011882551],"category_scores_gemma":[0.00018784309,0.00013773603,0.00029043955,0.00012109997,0.00025832714,0.00030082624,0.00023043048,0.0008358203,0.00026617319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0055148336,0.0011193827,0.00037717842,0.0002774617,0.000041776435,0.0001918149,0.000041785715,0.00040898236,0.9709118,0.0002408237,0.00039075364,0.020483412],"study_design_scores_gemma":[0.002026688,0.042229097,0.02013294,0.00007337983,0.00034594268,0.0013313508,0.00023192579,0.0045204177,0.9181803,0.0004245067,0.010455386,0.000048002392],"about_ca_topic_score_codex":0.00020002051,"about_ca_topic_score_gemma":0.00023352337,"teacher_disagreement_score":0.0011882551,"about_ca_system_score_codex":0.00013520235,"about_ca_system_score_gemma":0.00019181811,"threshold_uncertainty_score":0.0039750934},"labels":[],"label_agreement":null},{"id":"W2897553891","doi":"10.1164/rccm.201806-1157oc","title":"Cholesteryl Ester Transfer Protein Influences High-Density Lipoprotein Levels and Survival in Sepsis","year":2018,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":102,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; National Human Genome Research Institute; Canada Foundation for Innovation; Heart and Stroke Foundation of Canada","keywords":"Medicine; Sepsis; Mendelian randomization; Cholesterylester transfer protein; Septic shock; Internal medicine; Cohort; Intensive care unit; High-density lipoprotein; Cholesterol; Lipoprotein; Endocrinology; Genetic variants; Genetics; Gene; Biology; Genotype","score_opus":0.018360359350378753,"score_gpt":0.2891554713807026,"score_spread":0.2707951120303238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897553891","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99957794,0.00012274912,0.000077914185,0.000043702355,0.000004458949,0.000003781166,0.0000909836,0.0000020969549,0.00007645347],"genre_scores_gemma":[0.9994844,0.000085834756,0.00016760382,0.000040436495,0.000011454876,0.000006907657,0.00014429585,0.0000018536363,0.00005722415],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973947,0.00011670271,0.000026014624,0.0000639008,0.000030743005,0.000023167031],"domain_scores_gemma":[0.9990349,0.00040933202,0.00030843652,0.00005385211,0.00006065117,0.00013289787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059708435,0.00036123552,0.00020931753,0.00029422858,0.00025624648,0.00032280068,0.00024805265,0.00043546056,0.0010159177],"category_scores_gemma":[0.0015821672,0.00013940605,0.00030361416,0.00036466413,0.00042818763,0.000107740896,0.0002304443,0.00038155643,0.00013201579],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001766433,0.00008169029,0.98614025,0.000046428857,0.00023131733,0.00027938274,0.00005653833,0.00025965672,0.008053739,0.000036657144,0.00011925492,0.0029286921],"study_design_scores_gemma":[0.00008517147,0.00041915933,0.9966696,0.000012920358,0.00016462557,0.00047375256,0.000047693193,0.0008307833,0.001058467,0.00011167151,0.00012076906,0.00000557813],"about_ca_topic_score_codex":0.001440202,"about_ca_topic_score_gemma":0.0011535969,"teacher_disagreement_score":0.001440202,"about_ca_system_score_codex":0.00015979198,"about_ca_system_score_gemma":0.00029012712,"threshold_uncertainty_score":0.0033986568},"labels":[],"label_agreement":null},{"id":"W2897938440","doi":"10.1637/11840-041218-reg.1","title":"<i>In Ovo</i>Administration of Innate Immune Stimulants and Protection from Early Chick Mortalities due to Yolk Sac Infection","year":2018,"lang":"en","type":"article","venue":"Avian Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"In ovo; Biology; Antibiotics; Innate immune system; Immune system; Yolk sac; Microbiology; Immunity; Antimicrobial; Immunology; Embryo","score_opus":0.009702674757493784,"score_gpt":0.24322731322773705,"score_spread":0.23352463847024327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897938440","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9949411,0.0020397864,0.0011145845,0.00012336273,0.00013863483,0.00006720528,0.00041303664,0.0000494446,0.0011127449],"genre_scores_gemma":[0.9917269,0.0020049284,0.0022973688,0.00019375741,0.000050954717,0.00011254778,0.0008177935,0.000017678874,0.0027781257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999032,0.00001700846,0.000013563379,0.000020849258,0.000014167582,0.000031204774],"domain_scores_gemma":[0.9998087,0.000042173608,0.000056989105,0.000017971333,0.000025530213,0.00004865749],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014180374,0.0003761739,0.00034931002,0.00019226325,0.00010554284,0.00021443357,0.00018579072,0.0003239435,0.0011062672],"category_scores_gemma":[0.000168167,0.00007685343,0.00026541497,0.000076949196,0.00027956307,0.00017601995,0.00013371816,0.0006359878,0.00022193318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0039629876,0.00045369324,0.0005576859,0.00025836207,0.000018892377,0.00007692041,0.0000374571,0.00009392453,0.98894453,0.00007893475,0.0001606523,0.005355927],"study_design_scores_gemma":[0.00013712379,0.016608011,0.007615522,0.00003853498,0.00007207842,0.0001801659,0.000066901426,0.00034466982,0.9717388,0.00004035109,0.0031477157,0.000010113887],"about_ca_topic_score_codex":0.00049121684,"about_ca_topic_score_gemma":0.0008449882,"teacher_disagreement_score":0.0011062672,"about_ca_system_score_codex":0.00013153428,"about_ca_system_score_gemma":0.00021461971,"threshold_uncertainty_score":0.0037007928},"labels":[],"label_agreement":null},{"id":"W2899000252","doi":"10.1038/s41598-018-34760-6","title":"The effects of in ovo administration of encapsulated Toll-like receptor 21 ligand as an adjuvant with Marek’s disease vaccine","year":2018,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University; University of Calgary; University of Guelph","funders":"Ministry of Agriculture, Food and Rural Affairs; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"In ovo; Toll; Adjuvant; Marek's disease; Toll-like receptor; Receptor; Disease; Vaccine adjuvant; Virology; Medicine; Administration (probate law); Immunology; Biology; Internal medicine; Innate immune system; Virus; Political science; Genetics; Embryo","score_opus":0.0037243789755833957,"score_gpt":0.22731917796513681,"score_spread":0.22359479898955342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899000252","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99744785,0.0014480745,0.00034004042,0.00007337574,0.00010021492,0.000036082878,0.0000621496,0.000016948097,0.000475393],"genre_scores_gemma":[0.99601716,0.0012191513,0.0007921358,0.000084779276,0.000056280216,0.00004480213,0.00015479371,0.000011171249,0.0016197716],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998462,0.00004787944,0.000011509985,0.000022920964,0.000020635172,0.000050733604],"domain_scores_gemma":[0.99985135,0.000032542797,0.000040007224,0.000011968996,0.000014215161,0.000049912782],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022588581,0.0005117891,0.00045227274,0.00024973726,0.000114725335,0.00029090513,0.00024469735,0.00037222725,0.00068084075],"category_scores_gemma":[0.00024586503,0.00014268524,0.0003079133,0.000101068625,0.00028604487,0.00035666177,0.00017535471,0.00070204097,0.00014978598],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015356563,0.003798394,0.00042126342,0.0004200347,0.000057566733,0.00011225011,0.000071795206,0.0003944228,0.9669039,0.00012695124,0.00016398814,0.012172945],"study_design_scores_gemma":[0.0011629212,0.05982609,0.004446314,0.000044928922,0.0002459805,0.0002031108,0.000089253124,0.0016025878,0.9284816,0.00010779913,0.0037697072,0.00001982859],"about_ca_topic_score_codex":0.00040734746,"about_ca_topic_score_gemma":0.0005179427,"teacher_disagreement_score":0.00068084075,"about_ca_system_score_codex":0.00014946268,"about_ca_system_score_gemma":0.00027908507,"threshold_uncertainty_score":0.0022776127},"labels":[],"label_agreement":null},{"id":"W2899116392","doi":"10.1371/journal.pone.0203376","title":"Novel sequence variants in the TLR6 gene associated with advanced breast cancer risk in the Saudi Arabian population","year":2018,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Breast cancer; Single-nucleotide polymorphism; Allele; Internal medicine; Genotype; Allele frequency; Estrogen receptor; Medicine; Population; Oncology; Genetics; Biology; Cancer; Gynecology; Gene","score_opus":0.028571111017221432,"score_gpt":0.2408646526720261,"score_spread":0.21229354165480468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2899116392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986766,0.0005965784,0.0002621484,0.000053467786,0.000007946178,0.0000035440607,0.00022854567,0.0000029215132,0.00016808131],"genre_scores_gemma":[0.9989116,0.0002781701,0.00031226332,0.00004335944,0.0000107051455,0.0000029869148,0.00026012067,0.0000019003122,0.00017884841],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983144,0.000045157558,0.000025454843,0.00004713554,0.000032694858,0.000018125049],"domain_scores_gemma":[0.9996793,0.00008315086,0.00013796559,0.000024423518,0.000044224857,0.000030844934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024749278,0.00025286834,0.00019045219,0.0004143641,0.00020705878,0.00026293859,0.00015285838,0.0002764221,0.0019180722],"category_scores_gemma":[0.00064958027,0.00009304553,0.00036804576,0.000557065,0.00013018753,0.00009883913,0.00017493856,0.00021648129,0.00017605888],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010495847,0.00005709991,0.9627268,0.00012691254,0.00042052215,0.0013346145,0.0004186714,0.00047191762,0.013470839,0.00017349832,0.00037561957,0.019374011],"study_design_scores_gemma":[0.00006537127,0.00022725758,0.9912389,0.00003581937,0.00028721118,0.0034827008,0.00044309636,0.0012281028,0.0010015543,0.00023305054,0.0017416709,0.000015276853],"about_ca_topic_score_codex":0.0035562993,"about_ca_topic_score_gemma":0.002664537,"teacher_disagreement_score":0.0035562993,"about_ca_system_score_codex":0.00010721902,"about_ca_system_score_gemma":0.00011763607,"threshold_uncertainty_score":0.007071197},"labels":[],"label_agreement":null},{"id":"W2900032055","doi":"10.1177/1753425918808008","title":"Whatever happened to the Shwartzman phenomenon?","year":2018,"lang":"en","type":"review","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Shwartzman phenomenon; Fulminant; Purpura fulminans; Medicine; Immunology; Necrosis; Pathology; Pathogenesis; Sepsis; Dermatology","score_opus":0.04553523366387033,"score_gpt":0.316833970101769,"score_spread":0.2712987364378987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900032055","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0518384,0.46196306,0.01085714,0.4133196,0.04213332,0.00015166146,0.00041943017,0.00031670128,0.019000694],"genre_scores_gemma":[0.347735,0.2975046,0.01114692,0.22166072,0.09928246,0.0003201079,0.0003561203,0.00015583595,0.021838224],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99846077,0.00041478328,0.0001840058,0.00046047205,0.00021344433,0.00026651603],"domain_scores_gemma":[0.99664575,0.001545029,0.0004291581,0.00030518562,0.00081637176,0.00025853928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029651865,0.00065510673,0.0011197238,0.001449172,0.0014479209,0.002491758,0.0014994708,0.0076097716,0.0048939763],"category_scores_gemma":[0.014809446,0.0003713228,0.0010513103,0.001179898,0.008070221,0.009642733,0.0017528555,0.011759542,0.0015156486],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020585961,0.0006142946,0.038116768,0.00369826,0.00052721443,0.05004098,0.005878045,0.0009239102,0.004090842,0.4108542,0.123922996,0.35927385],"study_design_scores_gemma":[0.00034748195,0.0007249464,0.009960688,0.0023947917,0.00024858638,0.092323154,0.0070197033,0.00085612346,0.004162195,0.26545265,0.61599356,0.0005160671],"about_ca_topic_score_codex":0.0040152483,"about_ca_topic_score_gemma":0.001619103,"teacher_disagreement_score":0.0076097716,"about_ca_system_score_codex":0.0023045747,"about_ca_system_score_gemma":0.001122791,"threshold_uncertainty_score":0.016720891},"labels":[],"label_agreement":null},{"id":"W2900063234","doi":"10.1186/s13223-018-0305-2","title":"Unraveling the enigma: elucidating the relationship between the physicochemical properties of aluminium-based adjuvants and their immunological mechanisms of action","year":2018,"lang":"en","type":"review","venue":"Allergy Asthma and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Adjuvant; Aluminium; Vaccine adjuvant; Cytotoxicity; Chemistry; Immunology; Biology; Biochemistry; In vitro; Organic chemistry","score_opus":0.12101399762962585,"score_gpt":0.3437274674330694,"score_spread":0.2227134698034436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900063234","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012439981,0.998428,0.00017099119,0.0005267337,0.00025733648,0.0000021898343,0.000006144864,0.0000057346774,0.00047855455],"genre_scores_gemma":[0.00091365975,0.9977998,0.00020365577,0.0002407578,0.00040799828,0.0000043720343,0.000014678604,0.0000016529644,0.00041337335],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997687,0.00004194594,0.00003179778,0.00003768345,0.00009289621,0.000027059565],"domain_scores_gemma":[0.99941325,0.00027106743,0.000083700375,0.000023892628,0.00014950462,0.00005849495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078460394,0.00079384405,0.0011821402,0.0021863533,0.00034325337,0.0017108357,0.0009232866,0.0016184271,0.0022573005],"category_scores_gemma":[0.0008813609,0.00024730808,0.00039463484,0.0016897869,0.0009923886,0.0025523724,0.0010227549,0.0024394975,0.0015355796],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058840546,0.000077547105,0.00035202692,0.020021385,0.000064956366,0.00040365956,0.00021761257,0.0003244376,0.006949054,0.009878317,0.024574088,0.9370781],"study_design_scores_gemma":[0.000007754027,0.00010374606,0.00086858554,0.003747771,0.000061483915,0.0022288132,0.0002524524,0.000104808736,0.0012341451,0.00557731,0.9857917,0.000021567785],"about_ca_topic_score_codex":0.0005592915,"about_ca_topic_score_gemma":0.0008306844,"teacher_disagreement_score":0.0022573005,"about_ca_system_score_codex":0.00062900584,"about_ca_system_score_gemma":0.0014551342,"threshold_uncertainty_score":0.007551372},"labels":[],"label_agreement":null},{"id":"W2900166117","doi":"","title":"Lipid encapsulation promotes co-localization of methylated CpG ODN and TLR9 in late endosomes: A new model for the immunostimulatory activity of CpG DNA","year":2008,"lang":"en","type":"article","venue":"Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Arbutus Biopharma (Canada); University of British Columbia","funders":"","keywords":"TLR9; CpG Oligodeoxynucleotide; CpG site; Toll-Like Receptor 9; DNA methylation; Immune system; Methylation; Innate immune system; Cell biology; Biology; Chemistry; DNA; Cancer research; Molecular biology; Immunology; Biochemistry; Gene; Gene expression","score_opus":0.09721256468504698,"score_gpt":0.3786951196497882,"score_spread":0.2814825549647412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900166117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97887164,0.0010791657,0.016334506,0.00022088659,0.000056414647,0.000065929366,0.00011282278,0.00009681863,0.0031618087],"genre_scores_gemma":[0.9864036,0.0005769154,0.008805937,0.000060889066,0.000010174449,0.000047479098,0.00010448396,0.00003618636,0.003954219],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989855,0.000015597501,0.0000058796545,0.000024495384,0.000026860873,0.000028715402],"domain_scores_gemma":[0.9999423,0.000011285163,0.000021622705,0.000007023843,0.000007731226,0.000010047354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001550687,0.0003042273,0.00020276973,0.000116349795,0.00015057875,0.00033631784,0.000246104,0.00038250058,0.0008259427],"category_scores_gemma":[0.00010916932,0.00015557492,0.00028960672,0.00009335526,0.00021815594,0.000369472,0.00037073457,0.00043929234,0.0003811609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055918135,0.000017435215,0.000044566394,0.000023857425,0.000002309598,0.000039938124,0.000012087206,0.00008017384,0.9987595,0.00030161298,0.000020464491,0.00064208906],"study_design_scores_gemma":[0.000008080234,0.000117448,0.00023112385,0.0000025602114,0.0000049192186,0.00005104898,0.0000072200205,0.0012390887,0.9970289,0.00003763247,0.0012688932,0.0000032085766],"about_ca_topic_score_codex":0.00063196913,"about_ca_topic_score_gemma":0.000713074,"teacher_disagreement_score":0.0008259427,"about_ca_system_score_codex":0.00046272614,"about_ca_system_score_gemma":0.00017377546,"threshold_uncertainty_score":0.0033573508},"labels":[],"label_agreement":null},{"id":"W2900767667","doi":"10.2147/ott.s168478","title":"Potential role of Toll-like receptor 2 expression and polymorphisms in colon cancer susceptibility in the Saudi Arabian population","year":2018,"lang":"en","type":"article","venue":"OncoTargets and Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Deanship of Scientific Research, King Saud University; King Saud University","keywords":"Colorectal cancer; Toll-like receptor; Toll; Medicine; Oncology; Cancer research; Receptor; Internal medicine; Traditional medicine; Genetics; Cancer; Bioinformatics; Immunology; Biology; Innate immune system","score_opus":0.007153032326777952,"score_gpt":0.2460535840700643,"score_spread":0.23890055174328637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900767667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992113,0.00041696918,0.00006205378,0.00005647379,0.000004297277,0.0000020074522,0.00010833731,0.0000014870251,0.00013706279],"genre_scores_gemma":[0.99959844,0.00013979107,0.00007163324,0.000019942227,0.000004869792,0.000001970789,0.000084722014,7.723942e-7,0.00007789788],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997881,0.00007093941,0.000022988606,0.000053510503,0.000032424978,0.00003200656],"domain_scores_gemma":[0.999483,0.000099211626,0.00025787193,0.000029870633,0.00006969374,0.000060329407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040508405,0.00023269615,0.00016572498,0.0005455207,0.00023223115,0.00031228786,0.00019637223,0.0003004181,0.0016411532],"category_scores_gemma":[0.0008435707,0.00015409866,0.00025801774,0.00053253403,0.00017563936,0.00015179416,0.00021381558,0.00020250116,0.00011978805],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029823155,0.000018393017,0.9946037,0.000029612736,0.00008100386,0.00019169581,0.00015958193,0.00007939166,0.0020682537,0.000046613903,0.00008145713,0.0023421461],"study_design_scores_gemma":[0.000010688089,0.000090594476,0.9980603,0.000014336903,0.00005363697,0.0005142507,0.00021829094,0.00040787173,0.00024892783,0.000050628496,0.0003256542,0.000004803223],"about_ca_topic_score_codex":0.00484661,"about_ca_topic_score_gemma":0.0031474943,"teacher_disagreement_score":0.00484661,"about_ca_system_score_codex":0.00020682006,"about_ca_system_score_gemma":0.00017544135,"threshold_uncertainty_score":0.00963676},"labels":[],"label_agreement":null},{"id":"W2901038487","doi":"10.3390/v10110635","title":"The In Ovo Delivery of CpG Oligonucleotides Protects against Infectious Bronchitis with the Recruitment of Immune Cells into the Respiratory Tract of Chickens","year":2018,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Calgary","funders":"Alberta Agriculture and Forestry; Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Canadian Poultry Research Council","keywords":"In ovo; Biology; Immune system; Infectious bronchitis virus; Respiratory tract; Immunology; CpG site; Embryo; Respiratory system; Virology; Virus; Gene; Gene expression; Cell biology","score_opus":0.02127093028920012,"score_gpt":0.2522070859695799,"score_spread":0.23093615568037978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901038487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973326,0.00084495073,0.0009774301,0.00006709503,0.00005270635,0.000032844804,0.000099552686,0.000021720045,0.0005712075],"genre_scores_gemma":[0.99437696,0.0009681113,0.0017399418,0.00008448523,0.000021760161,0.000052756735,0.00018431427,0.000012823348,0.002558839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999062,0.000015437854,0.000009068947,0.000026474638,0.000016183976,0.000026615266],"domain_scores_gemma":[0.99987185,0.000021191147,0.000050948438,0.000010376837,0.000014925355,0.000030773008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116660194,0.00030866338,0.00021397976,0.00017308984,0.00008471647,0.00016207702,0.00012681537,0.00028897292,0.000875766],"category_scores_gemma":[0.00018173891,0.00012830453,0.00012665863,0.00004999156,0.00023147512,0.00015068863,0.00012154073,0.000493882,0.00014892322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028991772,0.000063583604,0.00015828607,0.000058114136,0.0000028080499,0.000019410518,0.000017522483,0.000027884213,0.9978411,0.000017623926,0.000014864078,0.001488814],"study_design_scores_gemma":[0.000060084192,0.005808736,0.008083238,0.0000380946,0.000034527573,0.00017943094,0.000094140385,0.00040163248,0.9828116,0.000040445586,0.0024412305,0.0000067277138],"about_ca_topic_score_codex":0.00049024064,"about_ca_topic_score_gemma":0.0007194929,"teacher_disagreement_score":0.000875766,"about_ca_system_score_codex":0.00013851271,"about_ca_system_score_gemma":0.00017968072,"threshold_uncertainty_score":0.002929747},"labels":[],"label_agreement":null},{"id":"W2901231310","doi":"10.1091/mbc.e18-07-0423","title":"Combinatorial processing of bacterial and host-derived innate immune stimuli at the single-cell level","year":2018,"lang":"en","type":"article","venue":"Molecular Biology of the Cell","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Institute of Standards and Technology; Stanford Research Computing Center, Stanford University; National Institutes of Health; Rensselaer Polytechnic Institute","keywords":"Biology; Immune system; Innate immune system; Cell biology; Transcription factor; Tumor necrosis factor alpha; Cytokine; Immunology; Cell; Secretion; Gene; Genetics; Biochemistry","score_opus":0.013403346956124326,"score_gpt":0.22874477408449562,"score_spread":0.2153414271283713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901231310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95217085,0.0013096812,0.044482153,0.00013208516,0.000050969036,0.000051888186,0.00023594155,0.00016318228,0.0014031526],"genre_scores_gemma":[0.9804646,0.0005910288,0.018021535,0.00006490147,0.000021805941,0.0000647867,0.00016913736,0.00003186929,0.00057030644],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99954647,0.00007143817,0.00003340645,0.00013157295,0.00015261462,0.00006443765],"domain_scores_gemma":[0.9995091,0.00016024485,0.00009475442,0.000088634886,0.00006712222,0.00008025185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004901619,0.0003608636,0.0007365928,0.00032546843,0.00019990842,0.001186541,0.00027111816,0.00038499833,0.0008373054],"category_scores_gemma":[0.000496464,0.00021563422,0.000319315,0.00028024838,0.0005847249,0.0011048359,0.00068508805,0.0008041391,0.00035278552],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060177706,0.000013819149,0.0005241415,0.000037835285,0.000005585188,0.000028635664,0.000021030652,0.00018392193,0.99697554,0.00017600355,0.000011028057,0.0019622887],"study_design_scores_gemma":[0.000011150839,0.00019979394,0.009925517,0.0000102355525,0.000023623781,0.0001968854,0.00014063736,0.0059668673,0.98160124,0.0010004342,0.000907405,0.000016283746],"about_ca_topic_score_codex":0.00011151945,"about_ca_topic_score_gemma":0.0002394194,"teacher_disagreement_score":0.001186541,"about_ca_system_score_codex":0.000252986,"about_ca_system_score_gemma":0.00026820498,"threshold_uncertainty_score":0.0028010607},"labels":[],"label_agreement":null},{"id":"W2901255373","doi":"10.1007/s00134-018-5463-7","title":"Polymyxin B hemoperfusion in endotoxemic septic shock patients without extreme endotoxemia: a post hoc analysis of the EUPHRATES trial","year":2018,"lang":"en","type":"article","venue":"Intensive Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":239,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Alberta; Iridian Spectral Technologies (Canada); St. Michael's Hospital","funders":"","keywords":"Medicine; Hemoperfusion; Septic shock; Post-hoc analysis; Anesthesia; Polymyxin; Mean arterial pressure; Polymyxin B; Clinical endpoint; Shock (circulatory); Internal medicine; Randomized controlled trial; Sepsis; Blood pressure; Hemodialysis; Antibiotics; Heart rate","score_opus":0.013387729359960616,"score_gpt":0.25688076416775785,"score_spread":0.24349303480779724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901255373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964329,0.0022707868,0.00021211342,0.00017428034,0.00012655197,0.00016015238,0.00019066618,0.000007665585,0.0004249008],"genre_scores_gemma":[0.99776196,0.0007305861,0.00023169073,0.00018297175,0.00020625677,0.0002390121,0.0002815249,0.000005140053,0.00036084518],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.9977337,0.0017099864,0.00011584059,0.0001851288,0.00010338509,0.00015191537],"domain_scores_gemma":[0.99783415,0.0010422969,0.0004871946,0.00026330675,0.00011458631,0.00025848986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030412034,0.001013966,0.0023853986,0.0001606432,0.00020240426,0.000804025,0.00041402492,0.00062064885,0.0015436052],"category_scores_gemma":[0.002924619,0.00025004844,0.0027423447,0.0002202394,0.0005279344,0.0006163747,0.00041733883,0.0013739066,0.00015322803],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9720765,0.001035293,0.007892504,0.000485724,0.0055795033,0.000105301144,0.00004904773,0.00049532193,0.002557369,0.00012090764,0.00051853433,0.009083943],"study_design_scores_gemma":[0.6685144,0.22486784,0.08301457,0.0002121096,0.01490599,0.00025985317,0.00015066293,0.0025926267,0.002724673,0.0005744456,0.0021046964,0.000078183475],"about_ca_topic_score_codex":0.00024851022,"about_ca_topic_score_gemma":0.00051252625,"teacher_disagreement_score":0.0030412034,"about_ca_system_score_codex":0.00034172286,"about_ca_system_score_gemma":0.00056135375,"threshold_uncertainty_score":0.016083658},"labels":[],"label_agreement":null},{"id":"W2902422036","doi":"10.1007/s00134-018-5481-5","title":"Treatment with a polymyxin B filter to capture endotoxin in sepsis patients: is there a signal for therapeutic efficacy?","year":2018,"lang":"en","type":"editorial","venue":"Intensive Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Medicine; Pain medicine; Anesthesiology; Polymyxin; Polymyxin B; Sepsis; Intensive care medicine; Anesthesia; Internal medicine; Antibiotics; Microbiology","score_opus":0.010802181288488878,"score_gpt":0.2692348856688213,"score_spread":0.25843270438033245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2902422036","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016066233,0.04185782,0.00031803438,0.068194464,0.8878823,0.000022753387,0.000052216412,0.00006486468,0.0014468665],"genre_scores_gemma":[0.0010897866,0.020325607,0.00021696488,0.036364444,0.93879044,0.000024992647,0.000028356324,0.00002060609,0.0031387936],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968952,0.0007391989,0.0006519899,0.00034460824,0.0011562789,0.00021271555],"domain_scores_gemma":[0.986821,0.008253572,0.00097196223,0.00025278374,0.0025785917,0.001122103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005608502,0.0024316518,0.00371287,0.0015437426,0.0014232723,0.0036307771,0.0024223765,0.015829433,0.003826984],"category_scores_gemma":[0.019406985,0.00082671084,0.0022185165,0.00066867337,0.0019336767,0.002732479,0.00087016966,0.024104526,0.003114804],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036614187,0.00006500469,0.000079769095,0.0011393055,0.000112362075,0.0005585859,0.000020120986,0.000062698535,0.00019912238,0.0006079139,0.96154326,0.03524567],"study_design_scores_gemma":[0.00065431965,0.0003048267,0.0008144259,0.0015596229,0.00039136494,0.0012135089,0.000044812117,0.00032461263,0.00054474064,0.0013792525,0.99272245,0.00004605365],"about_ca_topic_score_codex":0.00087175885,"about_ca_topic_score_gemma":0.0017794644,"teacher_disagreement_score":0.015829433,"about_ca_system_score_codex":0.0018972333,"about_ca_system_score_gemma":0.0016674005,"threshold_uncertainty_score":0.02966094},"labels":[],"label_agreement":null},{"id":"W2903669594","doi":"10.1093/jas/sky404.387","title":"357 Lipopolysaccharide induces a pro-inflammatory response in isolated ruminal epithelial cells.","year":2018,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Lipopolysaccharide; CXCL1; Chemokine; Inflammation; CXCL2; Interleukin 8; Flow cytometry; Biology; Propidium iodide; Proinflammatory cytokine; Tumor necrosis factor alpha; Immune system; Immunology; Molecular biology; Andrology; Chemistry; Programmed cell death; Apoptosis; Medicine; Biochemistry","score_opus":0.012919838793120645,"score_gpt":0.26387694649709875,"score_spread":0.2509571077039781,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903669594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98767626,0.004384245,0.004654115,0.00013837626,0.00012799665,0.00008369932,0.0011134937,0.000058208847,0.001763584],"genre_scores_gemma":[0.98287326,0.003035058,0.0067004487,0.00025574022,0.00006341053,0.000166698,0.0030339016,0.00002768004,0.0038438197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996768,0.00007507709,0.000035214853,0.0000521154,0.00008882477,0.00007204213],"domain_scores_gemma":[0.9998497,0.000036955964,0.00002668925,0.000023259694,0.00003295104,0.000030429834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003144706,0.00038112147,0.00045328552,0.00029225615,0.0001544442,0.0004227214,0.00012208131,0.0003489183,0.0017303481],"category_scores_gemma":[0.00014342142,0.00018961198,0.0005071024,0.00021740716,0.00024119807,0.00018557435,0.00032000465,0.00066465477,0.00086578587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015618387,0.000022313507,0.00021643676,0.00006436664,0.0000041536614,0.000049749226,0.000017592063,0.000016621825,0.9988832,0.00001158672,0.000014450715,0.00054326095],"study_design_scores_gemma":[0.000051881878,0.0015468511,0.017040025,0.000033043012,0.000033227527,0.00046200777,0.00024372907,0.0007769353,0.9768704,0.000071803355,0.0028595945,0.000010576239],"about_ca_topic_score_codex":0.00032332182,"about_ca_topic_score_gemma":0.0004020237,"teacher_disagreement_score":0.0017303481,"about_ca_system_score_codex":0.000143554,"about_ca_system_score_gemma":0.00018247149,"threshold_uncertainty_score":0.0057886243},"labels":[],"label_agreement":null},{"id":"W2904097792","doi":"10.1152/physrev.00065.2017","title":"Innate Immune Signaling and Its Role in Metabolic and Cardiovascular Diseases","year":2018,"lang":"en","type":"review","venue":"Physiological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Innate immune system; Biology; Immune system; Innate lymphoid cell; Inflammation; Pattern recognition receptor; Immunology; CCL18; Toll-like receptor; Acquired immune system; Transcription factor; Cell biology; Signal transduction; Receptor; Classical complement pathway; Genetics; Gene; Complement system","score_opus":0.04988921042411643,"score_gpt":0.30351084816759777,"score_spread":0.25362163774348134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904097792","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007847009,0.97976893,0.001997642,0.003652262,0.0010503753,0.000016346245,0.00015632325,0.000040383635,0.005470666],"genre_scores_gemma":[0.15688704,0.825217,0.002750757,0.0032398398,0.0032841081,0.00008995259,0.00036616105,0.000017344828,0.008147904],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99969745,0.00007661729,0.000029679048,0.000068360416,0.0000706051,0.000057395795],"domain_scores_gemma":[0.9998313,0.000030281459,0.000042837164,0.000008611134,0.00004887643,0.000038154525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004934554,0.00047130667,0.0005718441,0.0006559669,0.00041016936,0.0009436323,0.0003784342,0.0009571754,0.0026669088],"category_scores_gemma":[0.00040890585,0.000115421884,0.00043304058,0.0006961839,0.00067149085,0.00062006083,0.0007933336,0.0016527514,0.00067293295],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013145705,0.00038853806,0.0083411215,0.009385503,0.0004376752,0.002932262,0.0009296993,0.0013382486,0.1014445,0.09518332,0.054571208,0.7237334],"study_design_scores_gemma":[0.00010985218,0.00071486365,0.03759239,0.0031557467,0.0004591602,0.0074839415,0.00079302065,0.0017112487,0.015403976,0.06177176,0.87064654,0.00015750341],"about_ca_topic_score_codex":0.00086394034,"about_ca_topic_score_gemma":0.0005882106,"teacher_disagreement_score":0.0026669088,"about_ca_system_score_codex":0.0004946143,"about_ca_system_score_gemma":0.000805497,"threshold_uncertainty_score":0.008921742},"labels":[],"label_agreement":null},{"id":"W2904135173","doi":"10.1096/fasebj.31.1_supplement.lb643","title":"Interactive Role of TLR4 and TLR2 in Cardiac Functions During Stressful Conditions","year":2017,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Manitoba","funders":"","keywords":"TLR2; TLR4; Downregulation and upregulation; Tumor necrosis factor alpha; Receptor; Fibrosis; Medicine; Interleukin; Inflammation; Knockout mouse; Ischemia; Apoptosis; Toll-like receptor; Endocrinology; Internal medicine; Cytokine; Biology; Innate immune system","score_opus":0.006441535602265272,"score_gpt":0.23744288635004518,"score_spread":0.23100135074777992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904135173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991744,0.0028470275,0.00258217,0.00020574959,0.000058007725,0.000030104746,0.00029321664,0.00005153693,0.0021881952],"genre_scores_gemma":[0.99361306,0.0010744967,0.0016238014,0.00013829248,0.000032445874,0.00007091922,0.00037434296,0.000010193505,0.0030624336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974316,0.00006452105,0.000015662088,0.000038344664,0.00003683272,0.00010148022],"domain_scores_gemma":[0.99989855,0.000009211542,0.000031115742,0.0000084438825,0.000016778738,0.000035916306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020089476,0.00042812782,0.00024951,0.00025410866,0.0002192808,0.0003049928,0.00016863763,0.00040890838,0.0021213617],"category_scores_gemma":[0.0001473872,0.00015912903,0.00039422428,0.00008848938,0.00019039171,0.0002562223,0.00037472506,0.00048060407,0.0003861906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051401224,0.000041538104,0.0011140938,0.00010550981,0.000012578322,0.0001456034,0.000022515682,0.00009278552,0.9960627,0.00010541768,0.00006605973,0.0017171407],"study_design_scores_gemma":[0.00013270303,0.0018293599,0.07707121,0.00007196783,0.00013545218,0.0017785592,0.00043097057,0.0030494523,0.90787107,0.00074854295,0.006839643,0.000041109797],"about_ca_topic_score_codex":0.00015798605,"about_ca_topic_score_gemma":0.00017297469,"teacher_disagreement_score":0.0021213617,"about_ca_system_score_codex":0.00022471913,"about_ca_system_score_gemma":0.00020813973,"threshold_uncertainty_score":0.007096648},"labels":[],"label_agreement":null},{"id":"W2904619664","doi":"10.1016/j.abb.2018.12.022","title":"NOD1 and NOD2 in inflammation, immunity and disease","year":2018,"lang":"en","type":"review","venue":"Archives of Biochemistry and Biophysics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":223,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"NOD2; NOD1; Nod; Peptidoglycan; Innate immune system; Biology; Inflammation; Immunology; Pattern recognition receptor; Inflammatory bowel disease; Disease; Immune system; Autophagy; Acquired immune system; Genetics; Medicine; Gene; Pathology","score_opus":0.011226639458023449,"score_gpt":0.2526341025253611,"score_spread":0.24140746306733768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904619664","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009373241,0.99787164,0.00014358498,0.00041716275,0.00062888017,0.0000026969494,0.000012509685,0.000005588726,0.00082409906],"genre_scores_gemma":[0.0009224746,0.99609464,0.00022045014,0.00025130424,0.0010490932,0.000007805884,0.0000312533,0.0000013082205,0.0014217349],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981946,0.000027861268,0.000027892878,0.000030493811,0.00006964623,0.000024742636],"domain_scores_gemma":[0.99976,0.00008802988,0.000035013898,0.0000110827705,0.00007290483,0.00003298493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006937737,0.0007871384,0.0011565941,0.0014304257,0.00030830986,0.0011694713,0.000873153,0.0011467957,0.0032920043],"category_scores_gemma":[0.0007780074,0.000240829,0.00024711763,0.0016015352,0.00072736485,0.001666216,0.0011286745,0.0017207765,0.0017312008],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015226172,0.00008189718,0.00018476666,0.0124025,0.000058767768,0.0002782302,0.000069486945,0.00023954222,0.0033179924,0.00674236,0.048260592,0.92821157],"study_design_scores_gemma":[0.000016395115,0.00005189791,0.00041010565,0.0016759443,0.00005362121,0.00076600764,0.000060866223,0.00005209552,0.00047480784,0.0028516904,0.9935748,0.000011765275],"about_ca_topic_score_codex":0.000493821,"about_ca_topic_score_gemma":0.00091375184,"teacher_disagreement_score":0.0032920043,"about_ca_system_score_codex":0.00052187574,"about_ca_system_score_gemma":0.0015006484,"threshold_uncertainty_score":0.011012793},"labels":[],"label_agreement":null},{"id":"W2904658243","doi":"10.1074/jbc.ra118.004300","title":"Leucine-rich repeats and calponin homology containing 4 (Lrch4) regulates the innate immune response","year":2018,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Environmental Health Sciences; National Institutes of Health","keywords":"Innate immune system; Ectodomain; Biology; Cell biology; Leucine-rich repeat; Lipid raft; Receptor; Pattern recognition receptor; TLR3; Calponin; CD14; Immune receptor; Toll-like receptor; Signal transduction; Genetics; Actin","score_opus":0.016204517992846303,"score_gpt":0.250275806850283,"score_spread":0.2340712888574367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904658243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99011797,0.0020711683,0.0042011538,0.00032376315,0.00005525844,0.00003285678,0.0004840123,0.0001291171,0.002584807],"genre_scores_gemma":[0.99198604,0.0006185251,0.0022979034,0.00007684627,0.000016269389,0.000019755207,0.00044464608,0.000016605658,0.0045233215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998548,0.000023293152,0.00000668156,0.000027817223,0.000042091415,0.00004534483],"domain_scores_gemma":[0.9998934,0.000010139567,0.000035127145,0.000009840529,0.000018233806,0.000033143508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012162466,0.00032444915,0.0002034225,0.00025449175,0.00025274517,0.00031876934,0.00022560383,0.00029325092,0.0020356334],"category_scores_gemma":[0.0001772626,0.000116654744,0.00020993053,0.00013380886,0.00031650177,0.000264053,0.00051024434,0.00050677813,0.0004116695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015519607,0.000010432132,0.0009045098,0.000027379003,0.0000071168174,0.00009580757,0.000007397172,0.0001487029,0.9959336,0.00017620432,0.00010910288,0.0024246254],"study_design_scores_gemma":[0.0000622029,0.00032643124,0.03838984,0.000015426189,0.000041361684,0.0009007913,0.0001250439,0.0043665566,0.94826585,0.0007591933,0.006730707,0.000016681566],"about_ca_topic_score_codex":0.0007197912,"about_ca_topic_score_gemma":0.0012856544,"teacher_disagreement_score":0.0020356334,"about_ca_system_score_codex":0.00046024623,"about_ca_system_score_gemma":0.0003197732,"threshold_uncertainty_score":0.0068098903},"labels":[],"label_agreement":null},{"id":"W2909958736","doi":"10.1097/mol.0000000000000577","title":"Molecular regulation of plasma lipid levels during systemic inflammation and sepsis","year":2019,"lang":"en","type":"review","venue":"Current Opinion in Lipidology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Systemic inflammation; Inflammation; Sepsis; Medicine; Immunology","score_opus":0.07215265134214487,"score_gpt":0.3399888854371529,"score_spread":0.267836234095008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909958736","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009261921,0.9982241,0.00010794362,0.00032095844,0.00069786754,0.0000039463202,0.000017819573,0.000008092151,0.00052675465],"genre_scores_gemma":[0.0005570436,0.998075,0.000091044116,0.00025903428,0.00058841,0.0000063639186,0.00003422725,0.0000019172985,0.00038705653],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998078,0.00003406495,0.000034396813,0.000035544574,0.000068018206,0.000020164363],"domain_scores_gemma":[0.99966836,0.00011061456,0.00006689109,0.0000090051335,0.00010422251,0.000040922434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004588635,0.0010097255,0.0013473013,0.0014533761,0.00021033123,0.0009867221,0.0008290207,0.0012040794,0.0022751973],"category_scores_gemma":[0.0008726365,0.00021151235,0.00031943436,0.0016837616,0.0004891798,0.0014310047,0.0007312326,0.0016549887,0.0025526187],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018355052,0.000057678793,0.00026778493,0.025267135,0.00009166675,0.0003404875,0.00007498194,0.0003414697,0.003915806,0.003567004,0.067655675,0.89823675],"study_design_scores_gemma":[0.000017336648,0.00011834936,0.0013291892,0.00387342,0.000098129945,0.0019800216,0.0000689335,0.00008167823,0.00086620805,0.0019256081,0.9896169,0.0000243151],"about_ca_topic_score_codex":0.0004596804,"about_ca_topic_score_gemma":0.00053196686,"teacher_disagreement_score":0.0022751973,"about_ca_system_score_codex":0.00053994,"about_ca_system_score_gemma":0.00090209284,"threshold_uncertainty_score":0.0076112747},"labels":[],"label_agreement":null},{"id":"W2910926282","doi":"10.3889/oamjms.2018.369","title":"Evaluation of Serum Interleukin-6 Levels in the Renal Transplant Recipients: A Systematic Review and Meta-Analysis of Case-Control Studies.","year":2019,"lang":"en","type":"review","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Meta-analysis; Renal transplant; Cochrane Library; Internal medicine; Confidence interval; Transplantation; Gastroenterology","score_opus":0.2567042906207979,"score_gpt":0.36817656814477656,"score_spread":0.11147227752397865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910926282","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0052552484,0.9928598,0.00073896116,0.00018238125,0.00015212229,0.00026053155,0.00038386683,0.000017516775,0.00014962352],"genre_scores_gemma":[0.20283277,0.78716594,0.0052176407,0.00097528717,0.00043249305,0.0019003407,0.0011053749,0.00003195221,0.0003381892],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9871939,0.005814331,0.0037484337,0.0014120151,0.0014364179,0.000394917],"domain_scores_gemma":[0.9820128,0.012534812,0.0033134473,0.0006677042,0.0012779486,0.00019318036],"candidate_categories":["metaepi_broad"],"consensus_categories":[],"category_scores_codex":[0.015613917,0.0033769608,0.01972476,0.008752419,0.00075733225,0.0033838106,0.002121098,0.0029373849,0.0027164654],"category_scores_gemma":[0.033612393,0.0018612868,0.0470243,0.00844758,0.00063944247,0.0017546503,0.0013602951,0.0018652936,0.0002617083],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020815209,0.000041062398,0.008597462,0.24711497,0.7320668,0.00016041569,0.00006913336,0.0005468432,0.00027733526,0.000115088114,0.00042379397,0.008505565],"study_design_scores_gemma":[0.00039283957,0.0001777435,0.0038926187,0.014662784,0.9794638,0.000115208,0.00003206728,0.00015847704,0.00011589132,0.00012196832,0.00084837654,0.00001820798],"about_ca_topic_score_codex":0.0043334602,"about_ca_topic_score_gemma":0.008530554,"teacher_disagreement_score":0.9802752,"about_ca_system_score_codex":0.0022745512,"about_ca_system_score_gemma":0.0030095652,"threshold_uncertainty_score":0.08257526},"labels":[],"label_agreement":null},{"id":"W2911391424","doi":"10.3390/v11020093","title":"Class A Scavenger Receptors Are Used by Frog Virus 3 During Its Cellular Entry","year":2019,"lang":"en","type":"article","venue":"Viruses","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Research, Innovation and Science","keywords":"Biology; Ranavirus; Receptor; Virus; Scavenger receptor; Cell culture; Herpes simplex virus; Viral entry; Cell biology; Virology; Viral replication; Genetics; Biochemistry","score_opus":0.011289118929775138,"score_gpt":0.21706391563200664,"score_spread":0.2057747967022315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911391424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9711322,0.012659531,0.010679198,0.00015404752,0.00010553106,0.00008119236,0.0004948786,0.00020061182,0.004492827],"genre_scores_gemma":[0.985572,0.0022959649,0.0064789234,0.00012125562,0.00003596238,0.00005149914,0.00057569554,0.000014640362,0.0048541226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995752,0.0001194465,0.00002658444,0.00008421425,0.000096335134,0.00009827809],"domain_scores_gemma":[0.9998915,0.000017618691,0.000039940285,0.000013442894,0.0000172254,0.000020243553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026072306,0.00040698145,0.0003001839,0.00024148409,0.0002847717,0.00042324315,0.00018002096,0.00043029347,0.0019635137],"category_scores_gemma":[0.00016331031,0.00012411654,0.0005180844,0.00013612211,0.00022601527,0.00026902428,0.00024161836,0.00054768467,0.0006816263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007895494,0.0000125374445,0.00042310733,0.00004594039,0.000004411836,0.00004134472,0.00001580239,0.000014917904,0.9973895,0.00017197846,0.000039366543,0.0017621866],"study_design_scores_gemma":[0.00002359772,0.00065906055,0.02529835,0.000035856578,0.00002826619,0.0013345047,0.00009154779,0.00093107927,0.9616883,0.00022922542,0.009664092,0.000016033759],"about_ca_topic_score_codex":0.0006330364,"about_ca_topic_score_gemma":0.0005075611,"teacher_disagreement_score":0.0019635137,"about_ca_system_score_codex":0.00032194686,"about_ca_system_score_gemma":0.00020632135,"threshold_uncertainty_score":0.0065686703},"labels":[],"label_agreement":null},{"id":"W2911634460","doi":"10.1016/j.vetimm.2019.02.004","title":"Innate immune response profiles in pigs injected with vaccine adjuvants polydi(sodium carboxylatoethylphenoxy)phosphazene (PCEP) and Emulsigen","year":2019,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shared Health; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Ministry of Agriculture - Saskatchewan; University of Saskatchewan","keywords":"Lymph; Immune system; Innate immune system; Biology; Adjuvant; Immunology; Infiltration (HVAC); Cytokine; Medicine; Pathology; Materials science","score_opus":0.006516818288228373,"score_gpt":0.21865337937029214,"score_spread":0.21213656108206377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911634460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984427,0.00023180392,0.000327441,0.00006650667,0.00007502806,0.000030250276,0.0002679008,0.000013356629,0.0005450032],"genre_scores_gemma":[0.9942695,0.0003397093,0.00045172512,0.00026320992,0.000045150224,0.00010615814,0.00056312006,0.000013105712,0.003948377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980074,0.000023906086,0.00001384724,0.000048472586,0.000026317217,0.00008675283],"domain_scores_gemma":[0.99973565,0.00008421251,0.0000394966,0.00002029653,0.00003792614,0.00008248168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025552727,0.00036484213,0.0003975025,0.00023718008,0.0001654187,0.0003133125,0.0001259878,0.0008602754,0.0015991194],"category_scores_gemma":[0.0003122709,0.00021611915,0.0003436594,0.00009822596,0.00043024158,0.00045698887,0.00012440578,0.0011936357,0.00051029975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00904506,0.0009546678,0.0018772646,0.000098721976,0.000016470021,0.00025568102,0.00012440392,0.00014928156,0.98498744,0.000075616714,0.000104813356,0.0023105417],"study_design_scores_gemma":[0.0008262056,0.06898074,0.0913185,0.00006627365,0.00024803123,0.0010293215,0.00071427884,0.0029318947,0.8307516,0.00034945866,0.0027055591,0.00007806152],"about_ca_topic_score_codex":0.00034006053,"about_ca_topic_score_gemma":0.00036691595,"teacher_disagreement_score":0.0015991194,"about_ca_system_score_codex":0.00016232354,"about_ca_system_score_gemma":0.00024519642,"threshold_uncertainty_score":0.005349636},"labels":[],"label_agreement":null},{"id":"W2911807299","doi":"10.1038/s41598-018-36588-6","title":"Synthetic CpG-ODN rapidly enriches immune compartments in neonatal chicks to induce protective immunity against bacterial infections","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of Saskatchewan","funders":"Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency","keywords":"CpG Oligodeoxynucleotide; Immunity; Immune system; Immunology; Innate immune system; Biology; Microbiology; Medicine; Gene; Gene expression","score_opus":0.008809231259891631,"score_gpt":0.23123576432679072,"score_spread":0.22242653306689908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911807299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963091,0.0010103814,0.0018963901,0.000032018037,0.000030128776,0.000034479617,0.00020881051,0.000034493434,0.00044417704],"genre_scores_gemma":[0.9943119,0.0006335933,0.0028976162,0.00005885801,0.000008268213,0.000042637028,0.000288028,0.000012079384,0.0017469706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999343,0.000009345746,0.0000067140304,0.000018389279,0.000014984865,0.00001621759],"domain_scores_gemma":[0.99988997,0.000017019203,0.00003442009,0.00000743543,0.000015116952,0.000035971974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010988254,0.0002759197,0.00018457625,0.00012721954,0.000046421643,0.00011270471,0.00010220235,0.00017679857,0.0006328853],"category_scores_gemma":[0.000105167805,0.00010273165,0.00011345941,0.00003438175,0.00013534218,0.000089715344,0.000112268994,0.0003612121,0.00020248379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080832135,0.00000789524,0.00011659814,0.000024417513,9.735128e-7,0.000008419046,0.0000043058753,0.000014952328,0.9993563,0.0000050224453,0.0000051346447,0.0003750212],"study_design_scores_gemma":[0.000017165732,0.0012577632,0.007003545,0.000012805475,0.000010454136,0.000102678794,0.000027013884,0.00028173794,0.99041486,0.000012185509,0.00085664913,0.0000030890492],"about_ca_topic_score_codex":0.0003595424,"about_ca_topic_score_gemma":0.00081082835,"teacher_disagreement_score":0.0006328853,"about_ca_system_score_codex":0.000113555296,"about_ca_system_score_gemma":0.00012832375,"threshold_uncertainty_score":0.0021172166},"labels":[],"label_agreement":null},{"id":"W2911833917","doi":"10.1002/eji.201847805","title":"Impaired antigen‐specific lymphocyte priming in mice after Toll‐like receptor 4 activation via induction of monocytic myeloid‐derived suppressor cells","year":2019,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"Japan Society for the Promotion of Science; Japan Diabetes Foundation; Suzuken Memorial Foundation","keywords":"Biology; Immunology; Antigen; TLR4; Adoptive cell transfer; Immune system; Priming (agriculture); Antibody; T cell; Immune tolerance; Dendritic cell","score_opus":0.009814276382739571,"score_gpt":0.19787083343825995,"score_spread":0.18805655705552038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911833917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927007,0.0010337608,0.0032228453,0.00021332697,0.000092547685,0.00013717281,0.0009366697,0.00039691286,0.0012661101],"genre_scores_gemma":[0.99015254,0.0007166883,0.0025317203,0.00019281844,0.00004488157,0.00025888864,0.00074984826,0.000086207925,0.005266391],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960905,0.00006504268,0.000045306846,0.00008350658,0.00007518134,0.0001219112],"domain_scores_gemma":[0.9995577,0.000041628195,0.0001674255,0.00006184308,0.00002527118,0.00014616837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034096706,0.0011995473,0.0005123785,0.0010052291,0.00033656033,0.0004634528,0.00040366774,0.00078763894,0.002474009],"category_scores_gemma":[0.00021434342,0.0005082609,0.00056267076,0.00019589106,0.00060151966,0.00043006608,0.0004006296,0.0018517739,0.00077222247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090024836,0.00025920104,0.00026707497,0.00006746482,0.000010520694,0.00015212133,0.00003603257,0.000109736095,0.99656457,0.00027679783,0.000066307926,0.0012897695],"study_design_scores_gemma":[0.0004880053,0.004414133,0.008271532,0.00003961668,0.0000741804,0.00089665345,0.000085173575,0.0022416315,0.9797252,0.00046934522,0.003272378,0.000022214615],"about_ca_topic_score_codex":0.00031746583,"about_ca_topic_score_gemma":0.00033021288,"teacher_disagreement_score":0.002474009,"about_ca_system_score_codex":0.0004863882,"about_ca_system_score_gemma":0.00038013724,"threshold_uncertainty_score":0.008276403},"labels":[],"label_agreement":null},{"id":"W2912778709","doi":"10.1016/j.toxlet.2019.02.005","title":"Kaempferol reduces K63-linked polyubiquitination to inhibit nuclear factor-κB and inflammatory responses in acute lung injury in mice","year":2019,"lang":"en","type":"article","venue":"Toxicology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Natural Science Foundation of China","keywords":"ARDS; Inflammation; Cytokine; Lipopolysaccharide; Ubiquitin; Tumor necrosis factor alpha; Medicine; NF-κB; Pharmacology; Lung; Cancer research; Immunology; Chemistry; Internal medicine; Biochemistry","score_opus":0.0066032303141370565,"score_gpt":0.24398410119643774,"score_spread":0.23738087088230067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912778709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923199,0.0020843956,0.0029594626,0.00048649643,0.0001393203,0.000037889193,0.00040468515,0.00020688563,0.0013609872],"genre_scores_gemma":[0.992234,0.0012919828,0.0013370805,0.00013206329,0.000036362777,0.000045534256,0.00037090384,0.000037907703,0.0045141834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981517,0.000027503802,0.000016459207,0.000031868418,0.00003677121,0.00007226591],"domain_scores_gemma":[0.9997613,0.000023377315,0.00007617156,0.000034148157,0.00002963922,0.00007535467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022663956,0.00072356244,0.00036577074,0.0006038751,0.00029941302,0.00031285823,0.00032237105,0.0007938675,0.0023160912],"category_scores_gemma":[0.00019465642,0.0002833812,0.00052980107,0.00022660865,0.0005614919,0.0006911613,0.00016326501,0.0015753275,0.0005477183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016387698,0.00043274605,0.00016824297,0.0000736618,0.000023017295,0.000076004864,0.000029100831,0.00017211256,0.99431556,0.00018317651,0.00013486705,0.0027526615],"study_design_scores_gemma":[0.00014291052,0.0012020199,0.0021952656,0.0000151251315,0.00005041215,0.00018352017,0.00005694908,0.000861047,0.9934116,0.00020099139,0.0016686842,0.00001135563],"about_ca_topic_score_codex":0.0005722596,"about_ca_topic_score_gemma":0.0006894351,"teacher_disagreement_score":0.0023160912,"about_ca_system_score_codex":0.0002928807,"about_ca_system_score_gemma":0.00025567322,"threshold_uncertainty_score":0.0077480674},"labels":[],"label_agreement":null},{"id":"W2913147245","doi":"10.1097/shk.0000000000001301","title":"CCR5-Positive Inflammatory Monocytes are Crucial for Control of Sepsis","year":2019,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Sepsis; Chemokine; Immunology; Inflammation; Chemokine receptor; Monocyte; Chemotaxis; CXCR4; Receptor; Medicine; Systemic inflammation; Biology; Internal medicine","score_opus":0.005918951762257912,"score_gpt":0.22115062550559486,"score_spread":0.21523167374333696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913147245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9711453,0.016557872,0.007021647,0.00051083695,0.00018372589,0.00006820775,0.00043892514,0.000111002635,0.003962608],"genre_scores_gemma":[0.99460113,0.0022069123,0.0014771627,0.000120027966,0.00003789587,0.000017763605,0.0001971845,0.0000052634155,0.0013366299],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996413,0.00010055443,0.000032968688,0.000040398507,0.000057300414,0.00012741759],"domain_scores_gemma":[0.9998549,0.000010660662,0.000052580166,0.000011589633,0.000022784794,0.000047472695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002302809,0.00027178874,0.00020445406,0.00017863321,0.00020915293,0.00040486897,0.0001416278,0.00028879443,0.0014933669],"category_scores_gemma":[0.00022300244,0.00008344963,0.00018864954,0.000081330494,0.00018588481,0.00020571417,0.00027620108,0.000380689,0.0003302097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004287578,0.000044702985,0.002741918,0.00018562813,0.000011422664,0.0004197139,0.00006903051,0.0001245089,0.9841748,0.0011123687,0.00034429552,0.010342794],"study_design_scores_gemma":[0.00009575385,0.0022158409,0.1423531,0.0003093901,0.00010947672,0.004301119,0.000651115,0.0037802446,0.80907995,0.0010422784,0.03600984,0.000051981686],"about_ca_topic_score_codex":0.00050559605,"about_ca_topic_score_gemma":0.0005221778,"teacher_disagreement_score":0.0014933669,"about_ca_system_score_codex":0.00019070439,"about_ca_system_score_gemma":0.00026509655,"threshold_uncertainty_score":0.004995823},"labels":[],"label_agreement":null},{"id":"W2914317765","doi":"10.1002/bit.26936","title":"Application of a TLR overexpression cell model in pyrogen detection","year":2019,"lang":"en","type":"article","venue":"Biotechnology and Bioengineering","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China; National Science Foundation","keywords":"TLR4; TLR2; Stimulation; Cytokine; CD14; Receptor; Toll-like receptor; Cell; In vitro; Chemistry; Cell culture; Biology; Molecular biology; Immunology; Biochemistry; Innate immune system; Endocrinology","score_opus":0.002897255500519714,"score_gpt":0.17652251633296778,"score_spread":0.17362526083244806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914317765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8698159,0.0016576116,0.12148388,0.00050368876,0.0003309709,0.00029697767,0.0023672371,0.0004621971,0.0030815743],"genre_scores_gemma":[0.9096517,0.0015545393,0.07963058,0.00029842087,0.00007035614,0.00039702476,0.0027494037,0.00009236363,0.0055555264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887294,0.0002466577,0.00017222374,0.00027101135,0.00032563473,0.0001114644],"domain_scores_gemma":[0.99948645,0.00014188586,0.00009702553,0.00013371109,0.00008020688,0.00006079258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006676144,0.0006312419,0.00063139177,0.00042028565,0.00030940698,0.00064154173,0.0004716651,0.00082017115,0.0010468652],"category_scores_gemma":[0.00031685983,0.00027472145,0.00051697006,0.0003613826,0.00032348552,0.0005060536,0.0005322823,0.0014768802,0.00092865824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006601336,0.000049792397,0.00012955639,0.000026238047,0.0000033366844,0.000034725934,0.0000142174085,0.00010005319,0.99903333,0.00009466416,0.000034234152,0.00041390845],"study_design_scores_gemma":[0.00000915253,0.0002680637,0.0004291982,0.0000028988495,0.0000129031605,0.00015239065,0.000017543964,0.0020233586,0.9957854,0.00004372733,0.0012481854,0.00000718254],"about_ca_topic_score_codex":0.0003931181,"about_ca_topic_score_gemma":0.00044610607,"teacher_disagreement_score":0.0010468652,"about_ca_system_score_codex":0.00027559005,"about_ca_system_score_gemma":0.00023258236,"threshold_uncertainty_score":0.0035307407},"labels":[],"label_agreement":null},{"id":"W2915478701","doi":"10.1111/jphp.13082","title":"Easy and effective method to generate endotoxin-free chitosan particles for immunotoxicology and immunopharmacology studies","year":2019,"lang":"en","type":"article","venue":"Journal of Pharmacy and Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Fundação para a Ciência e a Tecnologia; GlaxoSmithKline","keywords":"Chitosan; Immunopharmacology; TLR4; Adjuvant; Tumor necrosis factor alpha; Chemistry; Proinflammatory cytokine; Limulus amebocyte lysate; Immunology; Lipopolysaccharide; Medicine; Inflammation; Immune system; Biochemistry","score_opus":0.020128300821737666,"score_gpt":0.36625384665135446,"score_spread":0.3461255458296168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915478701","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25394514,0.01385171,0.70450026,0.0010005058,0.0008053293,0.004570541,0.0017375946,0.002517719,0.017071199],"genre_scores_gemma":[0.53597546,0.0072960453,0.43651053,0.0005241847,0.00022079582,0.00281668,0.0016857093,0.0003218985,0.014648669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993631,0.000057019362,0.0000540546,0.00008496817,0.00039137984,0.00004943319],"domain_scores_gemma":[0.9996748,0.000039656,0.000098566954,0.000043907497,0.00011258105,0.000030471492],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055854063,0.00095318246,0.0002592398,0.0012430589,0.00026479544,0.00027760584,0.00040412997,0.00063297636,0.0031577474],"category_scores_gemma":[0.0004957391,0.00025013788,0.00045788646,0.00045436682,0.00032518493,0.00037975018,0.00039599004,0.00096980465,0.0017258453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025652556,0.000059795246,0.00013454958,0.00018569098,0.000009970104,0.00012559233,0.000017349312,0.00013965814,0.98787874,0.00026873176,0.00029073158,0.010863401],"study_design_scores_gemma":[0.00005448431,0.00030890288,0.0018508931,0.000041836207,0.000031379626,0.00058057706,0.000014000924,0.0010218932,0.9827542,0.00015533973,0.013148638,0.000037802896],"about_ca_topic_score_codex":0.0004789052,"about_ca_topic_score_gemma":0.0010040093,"teacher_disagreement_score":0.0031577474,"about_ca_system_score_codex":0.00032521313,"about_ca_system_score_gemma":0.0005303677,"threshold_uncertainty_score":0.010563672},"labels":[],"label_agreement":null},{"id":"W2916786655","doi":"10.1155/2019/3737890","title":"Increased TLR4 Expression Aggravates Sepsis by Promoting IFN-<i>γ</i>Expression in CD38<sup>−/−</sup>Mice","year":2019,"lang":"en","type":"article","venue":"Journal of Immunology Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Natural Science Foundation of China","keywords":"TLR4; Proinflammatory cytokine; Sepsis; Immunology; Lipopolysaccharide; Cytokine; Acute kidney injury; Medicine; Innate immune system; CD38; Kidney; Inflammation; Biology; Immune system; Internal medicine; Cell biology","score_opus":0.01694788875929643,"score_gpt":0.30135121989942876,"score_spread":0.28440333114013233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916786655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99209917,0.0010854233,0.0031423299,0.0007051246,0.00012618616,0.000048748854,0.0014139722,0.00020367073,0.0011754341],"genre_scores_gemma":[0.98300165,0.0015480232,0.004414044,0.00048986526,0.00006933648,0.00020324856,0.0015907958,0.00012855271,0.0085544735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959785,0.00005024088,0.000066156375,0.00008863049,0.00008474547,0.00011242681],"domain_scores_gemma":[0.9995339,0.000023913703,0.00018087415,0.000032814023,0.000031757314,0.00019674825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002664817,0.00089592586,0.0005394868,0.0008080659,0.00031062917,0.00053065544,0.00039069602,0.0008050331,0.0044105216],"category_scores_gemma":[0.0001575082,0.00046674637,0.0006043899,0.0002673454,0.00081531395,0.0005851291,0.0003131062,0.0021496445,0.0010805957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001102823,0.00017975735,0.00037658928,0.00008857586,0.000013663453,0.0001405404,0.000029366109,0.0000922778,0.9969735,0.00011541316,0.00009563617,0.0007919592],"study_design_scores_gemma":[0.00029634975,0.0024027855,0.0114965215,0.000047408226,0.00009060025,0.0013275455,0.00025105826,0.0020392593,0.97774464,0.00026345882,0.004009805,0.00003059872],"about_ca_topic_score_codex":0.0005898165,"about_ca_topic_score_gemma":0.0005206299,"teacher_disagreement_score":0.0044105216,"about_ca_system_score_codex":0.0003824751,"about_ca_system_score_gemma":0.00031474658,"threshold_uncertainty_score":0.014754713},"labels":[],"label_agreement":null},{"id":"W2919048718","doi":"10.3389/fimmu.2019.00272","title":"Toll-like Interleukin 1 Receptor Regulator Is an Important Modulator of Inflammation Responsive Genes","year":2019,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Chemokine; Interleukin-1 receptor; Signal transduction; CCL5; Biology; Cytokine; Toll-like receptor; Inflammation; Interleukin 8; Immunology; Interleukin 10; Cell biology; Innate immune system; Immune system; Interleukin; T cell; IL-2 receptor","score_opus":0.0059695433564098425,"score_gpt":0.21329628403258952,"score_spread":0.20732674067617968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919048718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8755525,0.073582806,0.018947994,0.001407948,0.0010647548,0.0002829551,0.009801804,0.0013528625,0.018006384],"genre_scores_gemma":[0.96002495,0.011652722,0.008566626,0.00079635886,0.00024681955,0.00024192307,0.005634539,0.000078004145,0.012758041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956936,0.00008167315,0.000032999407,0.00012241022,0.00009575249,0.00009777355],"domain_scores_gemma":[0.9998196,0.00002488892,0.0000798674,0.000012289236,0.000033035692,0.000030408724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023332509,0.0007343051,0.00047694918,0.00047498214,0.00032639722,0.000505498,0.00017742426,0.0003902858,0.0030671412],"category_scores_gemma":[0.00023110001,0.00014814765,0.0005095209,0.00034842698,0.00019263886,0.00023850056,0.00033845907,0.0006596319,0.001184007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038093622,0.00004835038,0.0024152168,0.0003494469,0.000026637723,0.00032761288,0.000055063683,0.00011162381,0.9817363,0.00026368658,0.0009261837,0.013358884],"study_design_scores_gemma":[0.00015877075,0.0017532478,0.12577152,0.00022501813,0.0002535529,0.004553038,0.00050693675,0.002641171,0.76958853,0.0007703568,0.093669534,0.00010823952],"about_ca_topic_score_codex":0.00025658557,"about_ca_topic_score_gemma":0.00030239078,"teacher_disagreement_score":0.0030671412,"about_ca_system_score_codex":0.00025895966,"about_ca_system_score_gemma":0.00019469504,"threshold_uncertainty_score":0.010260582},"labels":[],"label_agreement":null},{"id":"W2920906179","doi":"10.1002/jcb.27615","title":"Dachengqi decoction alleviates acute lung injury and inhibits inflammatory cytokines production through TLR4/NF‐κB signaling pathway in vivo and in vitro","year":2019,"lang":"en","type":"article","venue":"Journal of Cellular Biochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"TLR4; Proinflammatory cytokine; Tumor necrosis factor alpha; Lipopolysaccharide; NF-κB; Pharmacology; Cytokine; IκBα; Chemistry; Inflammation; Medicine; Immunology","score_opus":0.004019220836889505,"score_gpt":0.20865947505013716,"score_spread":0.20464025421324766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920906179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98729986,0.0073545547,0.0030917444,0.00028833252,0.000080035206,0.00008706112,0.0002926249,0.0001173463,0.001388418],"genre_scores_gemma":[0.99367154,0.0027420255,0.0018361013,0.00013696053,0.000021087411,0.000039204686,0.00020698081,0.0000074618656,0.0013386607],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999453,0.0000083827035,0.0000066118523,0.000008080256,0.0000190803,0.000012634904],"domain_scores_gemma":[0.99995875,0.00000493494,0.000010513204,0.0000036835197,0.000010155878,0.000011978048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121528676,0.00034307604,0.00038102176,0.00028742405,0.00017679908,0.00012784911,0.00013347561,0.00017884813,0.0010618545],"category_scores_gemma":[0.00009411063,0.00008471857,0.0002892841,0.00013012634,0.00020630009,0.00023120095,0.00014442283,0.0004195715,0.00007519276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000909627,0.00033871504,0.0005415286,0.00056753366,0.000039211576,0.00008288893,0.00004460206,0.00020780505,0.9864102,0.00014086106,0.00023040474,0.0104865795],"study_design_scores_gemma":[0.0006500885,0.0059801214,0.023541357,0.00005850897,0.00020036237,0.0005890196,0.00015053403,0.0030383437,0.9548492,0.0003614087,0.010552883,0.000028198645],"about_ca_topic_score_codex":0.0008171316,"about_ca_topic_score_gemma":0.0013181135,"teacher_disagreement_score":0.0010618545,"about_ca_system_score_codex":0.00017207091,"about_ca_system_score_gemma":0.00033387824,"threshold_uncertainty_score":0.003552258},"labels":[],"label_agreement":null},{"id":"W2921546445","doi":"10.1164/rccm.201808-1599oc","title":"IL4Rα Signaling Abrogates Hypoxic Neutrophil Survival and Limits Acute Lung Injury Responses <i>In Vivo</i>","year":2019,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Public Health Agency; Queen's University Belfast; Queen's University; Wellcome Trust","keywords":"Proinflammatory cytokine; Immunology; Hypoxia (environmental); Medicine; In vivo; Inflammation; Ex vivo; Neutrophil extracellular traps; Lung; Cytokine; Cancer research; Biology; Internal medicine; Chemistry","score_opus":0.010032455415429947,"score_gpt":0.28353355482572473,"score_spread":0.27350109941029477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921546445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897153,0.001534228,0.0043399413,0.00035083963,0.00015805529,0.00009483223,0.0012050818,0.00030988664,0.0022918629],"genre_scores_gemma":[0.99076384,0.00071172375,0.0025447514,0.00015172025,0.000042245938,0.00017058529,0.0012012955,0.000051123683,0.00436274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99959534,0.00009316949,0.00004597346,0.00007097593,0.00007048178,0.000124083],"domain_scores_gemma":[0.9997671,0.000023709888,0.00008046449,0.000037586055,0.000018624592,0.00007255446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002982435,0.0006051874,0.0005053443,0.0002798172,0.00017437233,0.00037540225,0.00038104627,0.00037537864,0.0025946097],"category_scores_gemma":[0.00013758207,0.00019091836,0.00040071155,0.00013728041,0.00042065905,0.00023631261,0.00019411097,0.0012160306,0.0008742056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012457437,0.00019382095,0.00013743754,0.000060389953,0.000010338708,0.00004615155,0.000015259786,0.00012061824,0.9966484,0.0001578787,0.00017868329,0.0011853343],"study_design_scores_gemma":[0.00010395998,0.0016217574,0.0014635277,0.000011245252,0.000020032609,0.0001666978,0.0000393613,0.0008824009,0.99350524,0.000045692534,0.0021358978,0.000004180423],"about_ca_topic_score_codex":0.00051661144,"about_ca_topic_score_gemma":0.00061272393,"teacher_disagreement_score":0.0025946097,"about_ca_system_score_codex":0.00035161656,"about_ca_system_score_gemma":0.000321348,"threshold_uncertainty_score":0.008679867},"labels":[],"label_agreement":null},{"id":"W2922370077","doi":"10.3389/fimmu.2019.00482","title":"TLR10 Senses HIV-1 Proteins and Significantly Enhances HIV-1 Infection","year":2019,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"TLR2; Biology; Immunology; Innate immune system; Context (archaeology); Human immunodeficiency virus (HIV); TLR9; Receptor; Virology; TLR7; Toll-like receptor; Immune system; Genetics; Gene expression; Gene; DNA methylation","score_opus":0.004517177677449389,"score_gpt":0.20008929799324773,"score_spread":0.19557212031579835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922370077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99127054,0.004328696,0.001532634,0.00019083507,0.000080652295,0.000033518878,0.00037439543,0.000060526527,0.00212824],"genre_scores_gemma":[0.9909725,0.0024222718,0.0024661066,0.00018317714,0.000025175801,0.00005540454,0.0006024105,0.00001183041,0.0032611648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998354,0.00003595691,0.000011681985,0.000031775224,0.00003990439,0.000045263627],"domain_scores_gemma":[0.99991083,0.000023622468,0.000018395915,0.000007815961,0.000018113391,0.000021261812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014845764,0.00038800357,0.00023887034,0.00019221118,0.00014543037,0.0002871975,0.00012680775,0.00036931844,0.0020372556],"category_scores_gemma":[0.0001633441,0.00014947765,0.00019508546,0.000101599115,0.00017268927,0.00018781802,0.00024388284,0.0005580468,0.0005291992],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014124697,0.000030276466,0.0004631166,0.00008550059,0.0000034312097,0.000053375,0.000016893258,0.00001905287,0.99774915,0.000020305675,0.000044902772,0.0013727215],"study_design_scores_gemma":[0.000020668716,0.000756511,0.017246215,0.00004807216,0.000028425044,0.0010228285,0.00019694027,0.0008058926,0.97543395,0.00007149518,0.004360247,0.0000088558445],"about_ca_topic_score_codex":0.00030385103,"about_ca_topic_score_gemma":0.000407942,"teacher_disagreement_score":0.0020372556,"about_ca_system_score_codex":0.0002182304,"about_ca_system_score_gemma":0.00012254095,"threshold_uncertainty_score":0.0068153143},"labels":[],"label_agreement":null},{"id":"W2924418428","doi":"10.1101/575415","title":"Irgm1-deficiency leads to myeloid dysfunction in colon lamina propria and susceptibility to the intestinal pathogen <i>Citrobacter rodentium</i>","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"CH.I.L.D. Foundation","keywords":"Citrobacter rodentium; Lamina propria; Biology; Inflammation; Pathogen; Microbiology; Immunity; Immune system; Immunology; Intracellular parasite; Intestinal mucosa; Medicine; Epithelium","score_opus":0.008714876288618202,"score_gpt":0.2060868681543722,"score_spread":0.197371991865754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924418428","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99695647,0.00057791924,0.0011049047,0.000114897666,0.000017862852,0.000025818725,0.00053797173,0.00010105162,0.0005630381],"genre_scores_gemma":[0.9967457,0.0001858605,0.001353243,0.000059868784,0.000005900688,0.0000286081,0.0003573596,0.00003590834,0.0012275254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969745,0.000059079248,0.00004214049,0.00008193742,0.000050872797,0.00006849196],"domain_scores_gemma":[0.9994252,0.00005405126,0.00026256414,0.000042350857,0.000024246638,0.00019156878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021138352,0.0006556938,0.0002841349,0.00058511813,0.0002073405,0.00028940136,0.00033985768,0.00066047703,0.0019359336],"category_scores_gemma":[0.00019995798,0.00029413687,0.00025882982,0.00017224476,0.00046679444,0.00018740192,0.0003933436,0.0008386109,0.00045976386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021760199,0.000034330813,0.00037920015,0.000033080072,0.00000428131,0.00015092484,0.000016031849,0.00005609471,0.99856997,0.00005540382,0.000028427281,0.00045465672],"study_design_scores_gemma":[0.000083104824,0.00080398575,0.03389778,0.000044395845,0.000035191213,0.0036408168,0.00020112646,0.0017151566,0.9567152,0.00012795061,0.0027148009,0.000020370375],"about_ca_topic_score_codex":0.0005890726,"about_ca_topic_score_gemma":0.00075742503,"teacher_disagreement_score":0.0019359336,"about_ca_system_score_codex":0.0004317955,"about_ca_system_score_gemma":0.00017391951,"threshold_uncertainty_score":0.0064763427},"labels":[],"label_agreement":null},{"id":"W2924639245","doi":"10.1002/mgg3.650","title":"Influence of <i>IL‐1R2</i> polymorphisms on endometrial cancer susceptibility in the Chinese Han population","year":2019,"lang":"en","type":"article","venue":"Molecular Genetics & Genomic Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Western University; Northwest University; Ministry of Education","keywords":"Endometrial cancer; Single-nucleotide polymorphism; Haplotype; Odds ratio; Oncology; Medicine; Internal medicine; Case-control study; Cancer; Bioinformatics; Genetics; Genotype; Biology; Gene","score_opus":0.006357752308988764,"score_gpt":0.25416971688441464,"score_spread":0.24781196457542587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2924639245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990368,0.00035192375,0.00015320831,0.000046294896,0.000007059017,0.0000062759595,0.00007728715,0.000004012322,0.0003172967],"genre_scores_gemma":[0.9996259,0.00007325815,0.00010776767,0.00002326944,0.000011306171,0.000004738893,0.00005344955,0.0000018879198,0.00009828655],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99962866,0.0001286151,0.000030399673,0.00009895836,0.00006125245,0.000052053285],"domain_scores_gemma":[0.9995376,0.00016221308,0.00013946084,0.000056310586,0.00004174157,0.00006274416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006887925,0.0003016456,0.00028405312,0.00043778616,0.00034950342,0.00030203004,0.00020533733,0.00024501717,0.0014778558],"category_scores_gemma":[0.00094276556,0.00013146056,0.0005127892,0.00045571255,0.00030099318,0.00009918678,0.00014600452,0.00021370979,0.00010694394],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009794433,0.00004650703,0.97773755,0.00004262921,0.0004695944,0.0011761629,0.00030153617,0.0001873556,0.01292705,0.00015967464,0.00018025014,0.005792267],"study_design_scores_gemma":[0.000023745968,0.00015231145,0.9969988,0.000007627828,0.00022819675,0.0008569669,0.0000708437,0.0003595689,0.0008712146,0.00008675922,0.00033822824,0.0000057457246],"about_ca_topic_score_codex":0.0060522044,"about_ca_topic_score_gemma":0.004771711,"teacher_disagreement_score":0.0060522044,"about_ca_system_score_codex":0.00017114982,"about_ca_system_score_gemma":0.0002816941,"threshold_uncertainty_score":0.012033939},"labels":[],"label_agreement":null},{"id":"W2933220795","doi":"10.3233/ch-189409","title":"Effect of lipopolysaccharide on the adherence of human umbilical vein endothelial cells (HUVEC) on a natural substrate","year":2018,"lang":"en","type":"article","venue":"Clinical Hemorheology and Microcirculation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Umbilical vein; Lipopolysaccharide; Endothelial stem cell; In vitro; In vivo; Chemistry; Immunology; Microbiology; Medicine; Biology; Biochemistry; Biotechnology","score_opus":0.02169400921861059,"score_gpt":0.32671228915853956,"score_spread":0.30501827993992897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2933220795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977754,0.0007851171,0.00038497278,0.00004760816,0.00006033993,0.000016701346,0.00009832302,0.000008602225,0.0008229589],"genre_scores_gemma":[0.9972132,0.00057663175,0.0009806681,0.000052706073,0.000017723623,0.000016387092,0.0002051138,0.0000041275935,0.00093347515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997173,0.0001117098,0.000029708917,0.000024020546,0.00004763722,0.00006959875],"domain_scores_gemma":[0.9998198,0.00006432227,0.000025327708,0.000023909322,0.000031775002,0.000034789984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002630607,0.00029158543,0.00022410334,0.00012898141,0.0001472459,0.00025783476,0.00011670704,0.00024046788,0.0015217838],"category_scores_gemma":[0.00028160846,0.000106138505,0.00024306987,0.00010034416,0.00013641173,0.00013773814,0.00022859909,0.00043281255,0.0002968116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059041515,0.00024872462,0.00078291923,0.00008627105,0.000020667314,0.00011351401,0.00011541789,0.00009211847,0.995106,0.000071065406,0.000067878565,0.0027050877],"study_design_scores_gemma":[0.00005913808,0.0045072506,0.0177984,0.000032837885,0.00004214249,0.0001436841,0.00018842336,0.001583443,0.9744562,0.000049384813,0.0011254242,0.000013635889],"about_ca_topic_score_codex":0.0010062112,"about_ca_topic_score_gemma":0.0007615646,"teacher_disagreement_score":0.0015217838,"about_ca_system_score_codex":0.00010320354,"about_ca_system_score_gemma":0.0001581511,"threshold_uncertainty_score":0.0050908923},"labels":[],"label_agreement":null},{"id":"W2934943437","doi":"10.1096/fasebj.27.1_supplement.356.4","title":"Retinoid derivatives offer anti‐inflammatory benefits by promoting neutrophil apoptosis and inhibiting proinflammatory mediator production in a model of bovine respiratory disease","year":2013,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health PEI; University of Alberta; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates - Health Solutions","keywords":"Proinflammatory cytokine; Retinoid; Apoptosis; Inflammation; Retinoic acid; Immunology; Context (archaeology); Mediator; Medicine; Chemistry; Biology; Cell culture; Internal medicine; Biochemistry","score_opus":0.011750751440949916,"score_gpt":0.20520993237892515,"score_spread":0.19345918093797523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2934943437","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926467,0.0043803253,0.0013977663,0.00019098504,0.0000501426,0.00005249785,0.00024399003,0.00005162932,0.0009859963],"genre_scores_gemma":[0.9912264,0.0025134622,0.0027329745,0.00006980482,0.00002287327,0.000055879602,0.00030549508,0.000014409325,0.0030587027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995839,0.00012918745,0.00003696665,0.000057822785,0.00009659715,0.00009556185],"domain_scores_gemma":[0.99971336,0.00006672182,0.000083335886,0.000034797624,0.000025815936,0.00007595457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000510867,0.00048934657,0.00046542153,0.00055231596,0.0002597792,0.00040144657,0.0003357148,0.0005228621,0.0011108166],"category_scores_gemma":[0.0002647374,0.00022736397,0.00021719084,0.00018703027,0.0005141297,0.0003021202,0.00019026142,0.00084109575,0.00024286973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012131365,0.00017523125,0.000120634686,0.000060113573,0.000006424006,0.00003855444,0.00002866235,0.00007949352,0.9971418,0.000040800904,0.000034275665,0.0010608207],"study_design_scores_gemma":[0.0002344976,0.009260543,0.0038774367,0.00002629144,0.00006322676,0.0002797699,0.00008033947,0.0005783635,0.9830005,0.00006618928,0.0025217459,0.000011094912],"about_ca_topic_score_codex":0.00252741,"about_ca_topic_score_gemma":0.0042342525,"teacher_disagreement_score":0.00252741,"about_ca_system_score_codex":0.00060836604,"about_ca_system_score_gemma":0.00036880915,"threshold_uncertainty_score":0.005025387},"labels":[],"label_agreement":null},{"id":"W2938434291","doi":"10.1111/all.13829","title":"Myeloid‐derived suppressor cells: Roles and relations with Th2, Th17, and Treg cells in asthma","year":2019,"lang":"en","type":"letter","venue":"Allergy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Research Institute in Oncology and Hematology; CancerCare Manitoba","funders":"Hospital for Sick Children; Research Manitoba","keywords":"Treg cell; Asthma; Suppressor; Immunology; Myeloid-derived Suppressor Cell; Myeloid; Content (measure theory); Medicine; Biology; Gene; Genetics; T cell; Mathematics; IL-2 receptor","score_opus":0.0049815767578225275,"score_gpt":0.17979524649300815,"score_spread":0.17481366973518564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2938434291","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022695478,0.044357516,0.00066241407,0.88746166,0.024698043,0.000039030077,0.000076662895,0.000054354252,0.019954799],"genre_scores_gemma":[0.32197145,0.057935994,0.0014399267,0.34191155,0.22617188,0.00015069766,0.00010384388,0.000046606332,0.050268065],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999526,0.00018435357,0.00006169632,0.000047392583,0.00010168009,0.00007889109],"domain_scores_gemma":[0.99863964,0.0010037782,0.00007988818,0.00004198685,0.00012914187,0.0001055808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010883247,0.00037642644,0.0006529121,0.0005521883,0.0010746231,0.001134811,0.00045178563,0.007881075,0.0029196923],"category_scores_gemma":[0.003610041,0.00024355613,0.00027475547,0.00040195897,0.0014851119,0.0015786926,0.00042049584,0.0051948857,0.0013112401],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019291219,0.0003012394,0.012904256,0.00055713963,0.000050921,0.111285225,0.001253217,0.00031333024,0.0106499875,0.02743528,0.71116686,0.12215347],"study_design_scores_gemma":[0.0005257822,0.00053330936,0.014545528,0.000669726,0.00007725665,0.10597378,0.0014115148,0.0016120174,0.0039731693,0.04348089,0.82711214,0.00008486099],"about_ca_topic_score_codex":0.0007235345,"about_ca_topic_score_gemma":0.0013176736,"teacher_disagreement_score":0.007881075,"about_ca_system_score_codex":0.0015297498,"about_ca_system_score_gemma":0.0005576278,"threshold_uncertainty_score":0.01109916},"labels":[],"label_agreement":null},{"id":"W2939799290","doi":"10.1016/j.vetimm.2019.04.005","title":"Natural and inducible regulatory B cells are widely distributed in ovine lymphoid tissues","year":2019,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Biology; Regulatory B cells; Lymphatic system; ELISPOT; Spleen; B cell; Immunology; Molecular biology; CpG Oligodeoxynucleotide; Immune system; Antibody; T cell","score_opus":0.00826664122248412,"score_gpt":0.22162764652389888,"score_spread":0.21336100530141477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939799290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9824341,0.00907192,0.0038136826,0.000049322396,0.000030910764,0.000025443918,0.00021691571,0.00005839855,0.0042993],"genre_scores_gemma":[0.99216896,0.0017438888,0.0022688431,0.000054620283,0.000040332587,0.000042379266,0.00039858365,0.000021955273,0.003260394],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997948,0.00003886517,0.000012573733,0.00007115039,0.00003747271,0.00004524013],"domain_scores_gemma":[0.9996842,0.000081594866,0.00009368182,0.00003596725,0.000050558137,0.000054059594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002053066,0.00017460575,0.00022426835,0.0006733535,0.00024352802,0.0005022723,0.0002056667,0.0003329596,0.002092906],"category_scores_gemma":[0.00030321756,0.00015800534,0.00013912345,0.00023200385,0.0002865452,0.00035947096,0.000292313,0.00039623867,0.00034971003],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000526214,0.000027860076,0.007617266,0.00010134898,0.000017488026,0.00025439044,0.00020112719,0.000043378743,0.9770668,0.00032332915,0.00006795909,0.013752888],"study_design_scores_gemma":[0.00025275923,0.0029661595,0.5295837,0.0002625238,0.00027299704,0.006749748,0.0028201502,0.0014139904,0.4052959,0.0014526382,0.048872225,0.000057223533],"about_ca_topic_score_codex":0.0003738883,"about_ca_topic_score_gemma":0.0007043123,"teacher_disagreement_score":0.002092906,"about_ca_system_score_codex":0.00010579676,"about_ca_system_score_gemma":0.00012056604,"threshold_uncertainty_score":0.0070014596},"labels":[],"label_agreement":null},{"id":"W2941651253","doi":"10.1128/mbio.00595-19","title":"Chlamydia trachomatis Lipopolysaccharide Evades the Canonical and Noncanonical Inflammatory Pathways To Subvert Innate Immunity","year":2019,"lang":"en","type":"article","venue":"mBio","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Innate immune system; Chlamydia trachomatis; TLR4; Immunology; Biology; Lipopolysaccharide; Immunity; Inflammation; Microbiology; Immune system","score_opus":0.0086598716581979,"score_gpt":0.21575987841085742,"score_spread":0.20710000675265952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2941651253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9703021,0.019553453,0.0032424158,0.0011050127,0.0002605389,0.000045970442,0.00040835538,0.000089058085,0.00499321],"genre_scores_gemma":[0.9948837,0.0024590716,0.0009615789,0.00024808187,0.000028632321,0.000013716363,0.00013042211,0.000005124922,0.0012697509],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974865,0.00004303536,0.000014696282,0.000026835034,0.000054340246,0.00011248184],"domain_scores_gemma":[0.9998839,0.000012112164,0.00003070771,0.000014519273,0.000019128702,0.000039605366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000198198,0.00029702985,0.00018749396,0.00019486013,0.00020752326,0.0003919586,0.00010378373,0.0003760696,0.0014553283],"category_scores_gemma":[0.00023755757,0.00007226336,0.00015142509,0.000103976294,0.00028557866,0.00029641343,0.0005145435,0.00052283145,0.00031590942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021453538,0.000053488726,0.0039997357,0.00020460608,0.000010911496,0.00030820438,0.00006099785,0.00005292726,0.9850787,0.0009108571,0.00036902574,0.008736019],"study_design_scores_gemma":[0.00008326839,0.0011871405,0.12181321,0.00027642437,0.0000629472,0.004510404,0.0007385315,0.002583885,0.8296015,0.002186971,0.036918156,0.000037543174],"about_ca_topic_score_codex":0.00045165257,"about_ca_topic_score_gemma":0.00058752677,"teacher_disagreement_score":0.0014553283,"about_ca_system_score_codex":0.0002799469,"about_ca_system_score_gemma":0.0004606138,"threshold_uncertainty_score":0.004868567},"labels":[],"label_agreement":null},{"id":"W2942131522","doi":"","title":"Transcriptomic Impact of IMA-08401, a Novel AHR Agonist Resembling Laquinimod, on Rat Liver","year":2019,"lang":"en","type":"article","venue":"eScholarship (California Digital Library)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Agonist; Aryl hydrocarbon receptor; Pharmacology; In vivo; Metabolite; Transcriptome; Immune system; Receptor; Toxicity; Ex vivo; Medicine; In vitro; Chemistry; Transcription factor; Internal medicine; Biology; Immunology; Gene expression; Biochemistry; Gene","score_opus":0.014845718306958737,"score_gpt":0.22946738962300997,"score_spread":0.21462167131605123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942131522","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899686,0.0019218667,0.0013607232,0.00012038743,0.000055478096,0.000029769688,0.0052897045,0.00006778428,0.0011856826],"genre_scores_gemma":[0.9849652,0.001771319,0.0015315328,0.00026437122,0.000023484026,0.000095827476,0.0053116814,0.00003440586,0.0060021975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999008,0.000007814384,0.0000043261107,0.000033701926,0.000025228746,0.000028066384],"domain_scores_gemma":[0.9999299,0.000009215058,0.000017509918,0.000005159146,0.000016235932,0.000021948203],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007557123,0.0002866608,0.0003180884,0.00027359565,0.00015469536,0.00022787202,0.000098115495,0.00026644484,0.0013424162],"category_scores_gemma":[0.00007451599,0.00010360505,0.00037855576,0.00024176006,0.00020679027,0.00012908365,0.00016283264,0.00042569303,0.00028014847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035038815,0.000017131702,0.00068367284,0.00005438238,0.000009444429,0.000041041832,0.000016486574,0.00006133274,0.99754363,0.000015589389,0.00005369757,0.0011532111],"study_design_scores_gemma":[0.000031062624,0.0022736024,0.09693202,0.000028936436,0.00013710727,0.00033608926,0.00037498688,0.0010638599,0.8932793,0.00010149214,0.005411627,0.000029930834],"about_ca_topic_score_codex":0.0009185261,"about_ca_topic_score_gemma":0.0016661984,"teacher_disagreement_score":0.0013424162,"about_ca_system_score_codex":0.00018766477,"about_ca_system_score_gemma":0.00017791842,"threshold_uncertainty_score":0.0044908524},"labels":[],"label_agreement":null},{"id":"W2945236555","doi":"10.1139/facets-2018-0045","title":"Pyrogenic and neuroinflammatory properties of zymosan and its potential as an alternative to live yeast in antipyretic drug testing","year":2019,"lang":"en","type":"article","venue":"FACETS","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Research Foundation; Alexander von Humboldt-Stiftung","keywords":"Zymosan; Antipyretic; Pharmacology; Medicine; Tumor necrosis factor alpha; Immunology; Prostaglandin E2; Endocrinology; Internal medicine; Chemistry; Analgesic; Biochemistry; In vitro","score_opus":0.012857899622725433,"score_gpt":0.2194522128733185,"score_spread":0.20659431325059308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945236555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9700475,0.009272968,0.018616766,0.00016470873,0.000049397306,0.00015011124,0.00037558726,0.00007372204,0.0012492717],"genre_scores_gemma":[0.97569895,0.00465872,0.017942613,0.000055814045,0.000027788616,0.00010709232,0.00029482297,0.000017513112,0.0011965706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983263,0.00006127821,0.000011444822,0.00002753604,0.000045769073,0.000021283277],"domain_scores_gemma":[0.9998202,0.00003707132,0.000053101863,0.000028255326,0.00002587783,0.000035502297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044397343,0.00041594735,0.0002721297,0.00033193085,0.00010904311,0.00032525687,0.00023182982,0.00032419004,0.00074056175],"category_scores_gemma":[0.00030293385,0.0001023957,0.00023545708,0.0002123222,0.00038765217,0.00039164076,0.00018832352,0.0004626977,0.00013041303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040682012,0.000082196886,0.00030859938,0.00007845294,0.000005348151,0.00009854864,0.000012726235,0.00012803763,0.9945978,0.00009145316,0.000016113188,0.0041739065],"study_design_scores_gemma":[0.000047846752,0.003594096,0.0046558008,0.000024773233,0.000021345762,0.0005987518,0.0000385131,0.0007862916,0.9888103,0.0001485932,0.0012647707,0.000008937701],"about_ca_topic_score_codex":0.0003142968,"about_ca_topic_score_gemma":0.000308908,"teacher_disagreement_score":0.00074056175,"about_ca_system_score_codex":0.00014208378,"about_ca_system_score_gemma":0.00020202731,"threshold_uncertainty_score":0.0024774075},"labels":[],"label_agreement":null},{"id":"W2945815300","doi":"10.3762/bjoc.15.174","title":"Design, synthesis and biological evaluation of immunostimulating mannosylated desmuramyl peptides","year":2019,"lang":"en","type":"article","venue":"Beilstein Journal of Organic Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Regional Development Fund; Medicinski Fakultet, Sveučilište u Zagrebu; Hrvatska Zaklada za Znanost; Terry Fox Foundation; Sveučilište u Zagrebu","keywords":"Muramyl dipeptide; Chemistry; Mannose; Adamantane; Peptidoglycan; Lipophilicity; Ovalbumin; Adjuvant; Peptide; Dipeptide; Mannose receptor; Biochemistry; Peptide synthesis; Lipopeptide; Linker; Immune system; Combinatorial chemistry; In vitro; Cell wall; Immunology; Organic chemistry; Biology","score_opus":0.02380655393910974,"score_gpt":0.24503750316709902,"score_spread":0.22123094922798928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945815300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99232507,0.002264033,0.0037367647,0.000054225566,0.000024997855,0.00015868653,0.00020596028,0.000022850107,0.0012074577],"genre_scores_gemma":[0.98434204,0.0031779262,0.009721956,0.00005340761,0.000019776993,0.00008260564,0.0004055153,0.000010187092,0.0021865482],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999225,0.000017065462,0.00000885596,0.000012865749,0.000022451046,0.000016366179],"domain_scores_gemma":[0.9999161,0.000009325677,0.000028491946,0.0000059926388,0.00001747876,0.000022637127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017670049,0.00029998334,0.00021155873,0.00013197174,0.00007790119,0.00016565704,0.00021867469,0.00020493359,0.0006235966],"category_scores_gemma":[0.00012149531,0.000104633145,0.00019474351,0.00012174824,0.00012737577,0.00018924929,0.00012869725,0.00028580934,0.00017977241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012355226,0.00007198436,0.00006251367,0.000081284044,0.0000062249314,0.00009793122,0.000015513155,0.00057533773,0.99546885,0.00008672569,0.000018622639,0.0033915532],"study_design_scores_gemma":[0.0000559905,0.0024947217,0.0006414205,0.0000065181657,0.000019908528,0.00021271416,0.0000111307445,0.0003854067,0.9932314,0.000028075016,0.0029068952,0.0000058441055],"about_ca_topic_score_codex":0.00014344919,"about_ca_topic_score_gemma":0.00021913303,"teacher_disagreement_score":0.0006235966,"about_ca_system_score_codex":0.0001915036,"about_ca_system_score_gemma":0.00014866685,"threshold_uncertainty_score":0.002086103},"labels":[],"label_agreement":null},{"id":"W2949489080","doi":"10.82308/8623","title":"The role of ZC3H12A in «Pseudomonas aeruginosa» infection of airway epithelial cells and implication in Cystic Fibrosis","year":2011,"lang":"en","type":"article","venue":"eScholarship@McGill (McGill)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pseudomonas aeruginosa; Cystic fibrosis; Molecular biology; MAPK/ERK pathway; p38 mitogen-activated protein kinases; Biology; Chemistry; Signal transduction; Cell biology; Bacteria; Genetics","score_opus":0.008029504643964297,"score_gpt":0.20063925226620755,"score_spread":0.19260974762224325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949489080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96741307,0.0278186,0.0012774314,0.00073814974,0.00007061131,0.00003255711,0.0004065746,0.00005287343,0.0021902693],"genre_scores_gemma":[0.99032885,0.004967036,0.0008396146,0.00013609178,0.000027133194,0.00003686463,0.00026761068,0.0000084794865,0.0033883695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984336,0.00003768641,0.000009632262,0.0000218101,0.000036739544,0.00005077083],"domain_scores_gemma":[0.99987316,0.000025452311,0.00002981793,0.00001115749,0.000016948348,0.000043480803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002349478,0.00026295963,0.00029128618,0.00034864133,0.00044384671,0.00050155015,0.00024436953,0.0006331894,0.0021245305],"category_scores_gemma":[0.00015774266,0.00018751847,0.000304837,0.00020593002,0.0005121786,0.00019964993,0.00028417932,0.0003668661,0.00054713263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009449105,0.000045936602,0.0020092065,0.00014427702,0.000010658575,0.00027513088,0.00004683717,0.000095503,0.98797137,0.0002563191,0.00017929985,0.0080206245],"study_design_scores_gemma":[0.00012275038,0.0014104528,0.11554406,0.00006330024,0.00005310251,0.0019512607,0.00031229548,0.0010695177,0.8663381,0.00057289324,0.012536958,0.000025265255],"about_ca_topic_score_codex":0.002692148,"about_ca_topic_score_gemma":0.002461488,"teacher_disagreement_score":0.002692148,"about_ca_system_score_codex":0.0005127344,"about_ca_system_score_gemma":0.0004515899,"threshold_uncertainty_score":0.0071071982},"labels":[],"label_agreement":null},{"id":"W2949782512","doi":"10.1016/j.dib.2019.104117","title":"Data on changes of NF-κB gene expression in liver and lungs as a biomarker and hepatic injury in CLP-induced septic rats","year":2019,"lang":"en","type":"article","venue":"Data in Brief","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University; Institut National de la Recherche Scientifique","funders":"","keywords":"Biomarker; Gene expression; Medicine; Sepsis; Pathology; Infiltration (HVAC); Real-time polymerase chain reaction; Reverse transcription polymerase chain reaction; Immunology; Gene; Biology","score_opus":0.03473093442941532,"score_gpt":0.2881422464828271,"score_spread":0.2534113120534118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949782512","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9639715,0.0138573665,0.013437854,0.00040757426,0.00020619569,0.00013947055,0.0053669973,0.00029055218,0.0023225718],"genre_scores_gemma":[0.9632323,0.011094868,0.014364057,0.00043834036,0.00017568555,0.000699474,0.0047635953,0.00009367439,0.0051379874],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99953043,0.000043432665,0.00006230194,0.00011318387,0.00019208493,0.00005861014],"domain_scores_gemma":[0.99929833,0.00008129731,0.00024299961,0.000058734164,0.00017590357,0.00014267593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004156489,0.0007494911,0.0005387022,0.0013580718,0.0002742033,0.00030175835,0.00017501564,0.0005040286,0.0021627871],"category_scores_gemma":[0.00036300512,0.0001487491,0.0006537984,0.0007332926,0.0005409482,0.00041767635,0.00022340976,0.001223714,0.0003734003],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001804358,0.00033856241,0.0036287322,0.0005275478,0.000048376864,0.000254824,0.00009624421,0.000093700364,0.98635,0.000080466525,0.00015895933,0.0066182166],"study_design_scores_gemma":[0.00010340479,0.0045925505,0.050087556,0.00008366089,0.00020475945,0.0013189053,0.00023109339,0.00056575163,0.9383133,0.00028173014,0.004165223,0.000052092375],"about_ca_topic_score_codex":0.0003035696,"about_ca_topic_score_gemma":0.00033918425,"teacher_disagreement_score":0.0021627871,"about_ca_system_score_codex":0.00018403603,"about_ca_system_score_gemma":0.0002968852,"threshold_uncertainty_score":0.007235229},"labels":[],"label_agreement":null},{"id":"W2950748303","doi":"10.7150/jca.31011","title":"Toll-like receptor 6 expression, sequence variants, and their association with colorectal cancer risk","year":2019,"lang":"en","type":"article","venue":"Journal of Cancer","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Deanship of Scientific Research, King Saud University; King Saud University","keywords":"Colorectal cancer; Odds ratio; Single-nucleotide polymorphism; Oncology; Confidence interval; Internal medicine; Population; Logistic regression; SNP; Case-control study; Medicine; Cancer; Genotype; TaqMan; Biology; Real-time polymerase chain reaction; Gene; Genetics","score_opus":0.005145429722037006,"score_gpt":0.2308758536503555,"score_spread":0.22573042392831852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950748303","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99938345,0.0003591162,0.000066364286,0.00001623816,0.0000029779417,0.0000015666944,0.00008662545,0.0000018559996,0.000081838596],"genre_scores_gemma":[0.9995907,0.00011108886,0.00009619873,0.0000075427106,0.000004124178,0.000001607646,0.00010103871,0.0000010866491,0.000086646396],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999811,0.00005139316,0.00002915743,0.000045233402,0.000035545843,0.000027645377],"domain_scores_gemma":[0.99930835,0.00017305055,0.00032054805,0.000055704382,0.00006565558,0.000076638906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026392238,0.00020392082,0.00018715247,0.00042141395,0.00014163482,0.00024104747,0.00013218484,0.00031402122,0.0013695948],"category_scores_gemma":[0.0014157433,0.00010778642,0.00026898863,0.0005085076,0.000116851574,0.000114859526,0.00016293887,0.00022281965,0.00013089293],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005069948,0.00001724212,0.9932591,0.000029916273,0.00010750552,0.00020707809,0.00005054564,0.00005748333,0.0027901435,0.000017743849,0.00004605355,0.0029102243],"study_design_scores_gemma":[0.000009744676,0.00013366112,0.9980282,0.0000050443896,0.00007125942,0.0008187928,0.000062258994,0.00030422452,0.00034331487,0.00003322554,0.00018744926,0.0000028412114],"about_ca_topic_score_codex":0.0017574565,"about_ca_topic_score_gemma":0.0019202415,"teacher_disagreement_score":0.0017574565,"about_ca_system_score_codex":0.00010518696,"about_ca_system_score_gemma":0.000090599235,"threshold_uncertainty_score":0.0045817494},"labels":[],"label_agreement":null},{"id":"W2951742985","doi":"10.1016/j.virol.2019.06.003","title":"Innate antiviral responses are induced by TLR3 and TLR4 ligands in chicken tracheal epithelial cells: Communication between epithelial cells and macrophages","year":2019,"lang":"en","type":"article","venue":"Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canada First Research Excellence Fund; Agriculture and Agri-Food Canada; University of Guelph; Canadian Poultry Research Council; Natural Sciences and Engineering Research Council of Canada; Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Biology; Innate immune system; TLR3; TLR4; Respiratory tract; TLR7; Stimulation; Cell biology; Interferon; Immunology; RIG-I; Viral replication; Epithelium; Respiratory system; Virus; Virology; Signal transduction; Immune system; Toll-like receptor; Anatomy","score_opus":0.009536204937634428,"score_gpt":0.23517878941538511,"score_spread":0.22564258447775068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2951742985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961947,0.0010384447,0.0009431398,0.000098771176,0.000025649791,0.000014061723,0.0001739561,0.000017451963,0.0014938238],"genre_scores_gemma":[0.9967181,0.00034590016,0.0007336574,0.000073521405,0.00001067226,0.000030577605,0.0002486244,0.000006770342,0.0018321682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996922,0.00007072239,0.00002421914,0.000047624162,0.000047212965,0.00011812875],"domain_scores_gemma":[0.9998559,0.000028244644,0.000026398757,0.000021305988,0.00003802766,0.000030218389],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001892751,0.0002738527,0.00027318773,0.00025064373,0.0003897911,0.0004978988,0.00018080194,0.0005271296,0.0013509233],"category_scores_gemma":[0.0001460123,0.00027929002,0.00042817477,0.00011422559,0.00031493718,0.00035997215,0.0003705169,0.0005773151,0.00049603195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002916058,0.0000074104405,0.0006919973,0.000028795559,0.0000034202274,0.00006569016,0.00003967698,0.00002474518,0.9983425,0.00009120219,0.000024360126,0.00038848157],"study_design_scores_gemma":[0.000036990277,0.0003472138,0.04772574,0.000026935264,0.00003780282,0.00036524778,0.0010053299,0.0012451005,0.946638,0.00017040178,0.0023860456,0.000015212445],"about_ca_topic_score_codex":0.0010416202,"about_ca_topic_score_gemma":0.0014281853,"teacher_disagreement_score":0.0013509233,"about_ca_system_score_codex":0.00048755444,"about_ca_system_score_gemma":0.0003487098,"threshold_uncertainty_score":0.004519224},"labels":[],"label_agreement":null},{"id":"W2953087963","doi":"10.1038/s41598-019-44019-3","title":"IκBζ facilitates protective immunity against Salmonella infection via Th1 differentiation and IgG production","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"CH.I.L.D. Foundation; National Research Foundation of Korea; National Research Foundation","keywords":"Immune system; Biology; Germinal center; Salmonella; Antibody; Microbiology; Cytokine; Immunology; B cell; Immunity; Salmonella infection; Immunoglobulin G; Bacteria","score_opus":0.007294647963480509,"score_gpt":0.2101122411267981,"score_spread":0.2028175931633176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953087963","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945155,0.0018266859,0.001406666,0.00009076744,0.000040770396,0.0000148452145,0.00026618261,0.000109609195,0.0017290394],"genre_scores_gemma":[0.99642605,0.0005917088,0.00058840815,0.000023632792,0.0000131841225,0.000010192769,0.0001635469,0.000016310849,0.0021671236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998702,0.000020072257,0.000008567741,0.000023724908,0.00002667921,0.000050765262],"domain_scores_gemma":[0.9998062,0.00001809808,0.000064015534,0.000022817216,0.000020210886,0.00006859997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017765485,0.0006198186,0.00018122204,0.0002799071,0.00011071934,0.00029146593,0.00014784509,0.00022107255,0.0019000961],"category_scores_gemma":[0.00010733023,0.0001615891,0.00022630379,0.00009640228,0.00028867632,0.0001461378,0.00020989249,0.00053244695,0.0007397012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011197824,0.000017118069,0.00023443582,0.000026788774,0.0000013595798,0.000024880008,0.0000065486574,0.000016054459,0.99911374,0.0000234727,0.000014537757,0.00040918303],"study_design_scores_gemma":[0.000034020253,0.0003886967,0.011082903,0.000018461913,0.000018152527,0.00021421946,0.00005784689,0.0003771077,0.98624307,0.000090558504,0.0014714637,0.0000035422572],"about_ca_topic_score_codex":0.00046831003,"about_ca_topic_score_gemma":0.00044414424,"teacher_disagreement_score":0.0019000961,"about_ca_system_score_codex":0.0002619005,"about_ca_system_score_gemma":0.00020873715,"threshold_uncertainty_score":0.0063564777},"labels":[],"label_agreement":null},{"id":"W2958628185","doi":"10.1016/j.ebiom.2019.07.005","title":"TLR9 agonist MGN1703 enhances B cell differentiation and function in lymph nodes","year":2019,"lang":"en","type":"article","venue":"EBioMedicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Maccabi Institute for Health Services Research; National Cancer Institute; European Research Council; Augustinus Fonden; Danmarks Frie Forskningsfond; Nature Conservancy of Canada; Aarhus Universitets Forskningsfond; Novo Nordisk Fonden; Deutsches Zentrum für Infektionsforschung","keywords":"TLR9; Immunology; Lymph node; Lymph; Agonist; Medicine; Biology; Cancer research; Internal medicine; Pathology; Receptor","score_opus":0.004128580619268699,"score_gpt":0.20236770284717037,"score_spread":0.1982391222279017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2958628185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974166,0.0009288467,0.0002884191,0.00006367778,0.000024421164,0.000031922667,0.00021952172,0.000024919696,0.0010016606],"genre_scores_gemma":[0.9969682,0.00054007076,0.0006683373,0.000114926086,0.000020203162,0.000064475746,0.00030449696,0.000009521808,0.0013097508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998895,0.00003107294,0.0000066722214,0.000017545197,0.000026218144,0.00002898201],"domain_scores_gemma":[0.99994266,0.000009147237,0.000015877464,0.0000050149506,0.00000739195,0.00001997544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016365232,0.00027554354,0.00023604285,0.00012811406,0.000120790544,0.00015186756,0.00016598466,0.00024407638,0.0044330205],"category_scores_gemma":[0.00012194448,0.00008815702,0.00018322465,0.00007471758,0.00013770557,0.00011569539,0.00017823103,0.00043943725,0.00079907785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004038536,0.0003358375,0.0007324003,0.00015998025,0.000010162162,0.000042847263,0.000029999199,0.00009410863,0.9854783,0.000024991252,0.00015119808,0.008901576],"study_design_scores_gemma":[0.0010979167,0.03837026,0.030558715,0.00007794813,0.00011167311,0.0006699568,0.0002107385,0.0010177619,0.92107886,0.00017543112,0.0066157347,0.000014933502],"about_ca_topic_score_codex":0.00018547635,"about_ca_topic_score_gemma":0.00044919978,"teacher_disagreement_score":0.0044330205,"about_ca_system_score_codex":0.00014777391,"about_ca_system_score_gemma":0.00016257899,"threshold_uncertainty_score":0.014829874},"labels":[],"label_agreement":null},{"id":"W2960015172","doi":"10.1186/s12974-019-1538-9","title":"Ciprofloxacin and levofloxacin attenuate microglia inflammatory response via TLR4/NF-kB pathway","year":2019,"lang":"en","type":"review","venue":"Journal of Neuroinflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":524,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research; Università degli Studi di Padova; Nvidia","keywords":"Microglia; Neuroinflammation; TLR4; Chemistry; Pharmacology; Signal transduction; Inflammation; Biochemistry; Immunology; Biology","score_opus":0.03186677744855996,"score_gpt":0.2830528611925863,"score_spread":0.25118608374402634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2960015172","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9774678,0.012367531,0.0037287064,0.0004925627,0.00010595122,0.00008364264,0.00044655017,0.00013742066,0.005169849],"genre_scores_gemma":[0.99285936,0.0035090097,0.0019732702,0.00009568807,0.000008340456,0.00005154355,0.00035822508,0.0000066402504,0.0011380104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999459,0.000009453756,0.0000027695594,0.0000063417183,0.000013899636,0.000021618538],"domain_scores_gemma":[0.99996746,0.00000385882,0.000010693755,0.0000012921779,0.000006766294,0.000009814958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007605213,0.00036511512,0.00029571258,0.00012646047,0.00019612802,0.00022096443,0.00029217257,0.00033776843,0.0030066804],"category_scores_gemma":[0.000115352464,0.00009575572,0.0004389987,0.000078342506,0.00013528425,0.00021920679,0.00016465689,0.0003571313,0.00035731553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005490592,0.0012338819,0.0062699,0.003095277,0.00039480889,0.00079396606,0.00008982878,0.0630703,0.8700488,0.0016775458,0.0040667113,0.043768246],"study_design_scores_gemma":[0.0022273157,0.012184352,0.02644522,0.00058963255,0.0009148621,0.0012835488,0.0007498264,0.30060825,0.6109214,0.00322391,0.04064809,0.00020373346],"about_ca_topic_score_codex":0.002046094,"about_ca_topic_score_gemma":0.0031922248,"teacher_disagreement_score":0.0030066804,"about_ca_system_score_codex":0.00033180235,"about_ca_system_score_gemma":0.00060425856,"threshold_uncertainty_score":0.010058284},"labels":[],"label_agreement":null},{"id":"W2960654013","doi":"10.1007/978-1-4939-9591-2_6","title":"Quantifying Human Innate Cytokine and Chemokine Responses Ex Vivo via Pattern Recognition Receptor Stimulation","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Immunology; Pattern recognition receptor; Innate lymphoid cell; TLR3; Chemokine; TLR7; Immune system; CCL18; TLR4; TLR5; Cytokine; Ex vivo; Toll-like receptor; In vivo","score_opus":0.03900888117446448,"score_gpt":0.37270953375931337,"score_spread":0.3337006525848489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2960654013","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9392636,0.0030623497,0.051632736,0.00021388291,0.00013898712,0.00021461991,0.0020652134,0.00026197487,0.0031466936],"genre_scores_gemma":[0.9494538,0.0028338772,0.038155302,0.00026255735,0.00014293358,0.00043236263,0.0030269995,0.00007739081,0.0056148325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995123,0.00014265695,0.000027870883,0.00012242027,0.000119302946,0.00007542505],"domain_scores_gemma":[0.99980205,0.00010537307,0.000021089048,0.00003172179,0.000018286366,0.000021596346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064038776,0.0004879866,0.00029352476,0.0002534962,0.00017038794,0.00056266837,0.00024426891,0.00039930045,0.0024592292],"category_scores_gemma":[0.00028444038,0.00019118997,0.00023781252,0.0003090818,0.00028230873,0.00030751253,0.00021700351,0.0008473582,0.0008892633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019080803,0.000032104203,0.00012307595,0.000017091195,0.000003779682,0.000009396299,0.000008538449,0.000069993075,0.9981932,0.000051124,0.0000522638,0.0012485436],"study_design_scores_gemma":[0.000026226098,0.00022805444,0.0015665091,0.000003133339,0.000010910177,0.000058264322,0.000011751406,0.0010839412,0.9959752,0.000059641185,0.00097231753,0.0000040714385],"about_ca_topic_score_codex":0.00017669762,"about_ca_topic_score_gemma":0.0003791826,"teacher_disagreement_score":0.0024592292,"about_ca_system_score_codex":0.0001643935,"about_ca_system_score_gemma":0.0001709841,"threshold_uncertainty_score":0.008226931},"labels":[],"label_agreement":null},{"id":"W2961169875","doi":"10.1016/j.it.2019.06.005","title":"Modulation of Innate Immunity by Amyloidogenic Peptides","year":2019,"lang":"en","type":"review","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Amyloid (mycology); Biology; Immune system; Cell biology; Antimicrobial peptides; Inflammation; Amyloid disease; Extracellular; Immunology; Peptide; Biochemistry; Disease","score_opus":0.0425905397969816,"score_gpt":0.3186914832903413,"score_spread":0.2761009434933597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2961169875","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000086479486,0.99725527,0.00015561275,0.00038274532,0.0010152245,0.0000030746514,0.000015593372,0.000008962782,0.0010770699],"genre_scores_gemma":[0.00045136746,0.997285,0.0001383095,0.0003306337,0.0008638254,0.0000047166855,0.000026744077,0.0000014611096,0.00089795917],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983454,0.000020339658,0.00002241283,0.000030638035,0.000070210735,0.00002180687],"domain_scores_gemma":[0.99970573,0.000103623715,0.00005045595,0.000010327835,0.00007413829,0.000055710698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005620455,0.0011620605,0.0013081876,0.0012067443,0.00022860082,0.001297395,0.000803268,0.001155056,0.003676297],"category_scores_gemma":[0.0006444326,0.00022392177,0.000285656,0.0013238884,0.0005730827,0.0013498758,0.0009386225,0.0024429986,0.0029498094],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015397585,0.00006841622,0.00011309981,0.0077388873,0.000049345235,0.00017366804,0.000021953185,0.00027004207,0.003373164,0.0026407475,0.04543835,0.9399584],"study_design_scores_gemma":[0.000026859407,0.00008632008,0.0006698714,0.0020369382,0.00006272294,0.00064733735,0.000034524983,0.000080035185,0.000651184,0.0020011135,0.993687,0.000016274766],"about_ca_topic_score_codex":0.00044782952,"about_ca_topic_score_gemma":0.0009636943,"teacher_disagreement_score":0.003676297,"about_ca_system_score_codex":0.0005591564,"about_ca_system_score_gemma":0.00087008177,"threshold_uncertainty_score":0.012298405},"labels":[],"label_agreement":null},{"id":"W2963627792","doi":"10.1101/708503","title":"A porcine ex vivo lung perfusion model to investigate bacterial pathogenesis","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Queen's University; Queen's University Belfast","keywords":"Klebsiella pneumoniae; Ex vivo; Biology; Pathogenesis; Lung; In vivo; Microbiology; Pneumonia; Immunology; Medicine; Escherichia coli; Gene","score_opus":0.012705630540510045,"score_gpt":0.21209180706644193,"score_spread":0.19938617652593188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963627792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9043353,0.006714077,0.07822933,0.00049281475,0.00043500584,0.00082806486,0.0017957113,0.00061257725,0.006557161],"genre_scores_gemma":[0.9636966,0.002665373,0.02584582,0.00031840266,0.00006288535,0.00068608776,0.0018044915,0.000067702415,0.004852753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996087,0.00008667158,0.000027355989,0.000096376505,0.00009385528,0.000086924796],"domain_scores_gemma":[0.9996797,0.000067592875,0.00008791417,0.000052275835,0.00004505298,0.000067423876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073232886,0.00084616814,0.0004668071,0.00053682283,0.00021623685,0.0005434658,0.0003501499,0.0010389952,0.0027469965],"category_scores_gemma":[0.00019797967,0.00028250014,0.0006377605,0.0002931634,0.0003811765,0.0005560242,0.00041460452,0.0014271451,0.00077986345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003520965,0.00022884976,0.0005047883,0.00013223088,0.000010130505,0.00029574183,0.000033752993,0.00020537784,0.99617803,0.00014141726,0.00010461341,0.0018130218],"study_design_scores_gemma":[0.00007671583,0.011634834,0.010290796,0.000082176215,0.000105270505,0.0027474263,0.00018331107,0.0056447987,0.9597156,0.000260053,0.009212438,0.000046511777],"about_ca_topic_score_codex":0.000512162,"about_ca_topic_score_gemma":0.00059600576,"teacher_disagreement_score":0.0027469965,"about_ca_system_score_codex":0.00028092467,"about_ca_system_score_gemma":0.00036427446,"threshold_uncertainty_score":0.009189606},"labels":[],"label_agreement":null},{"id":"W2963842139","doi":"10.1002/mgg3.852","title":"Toll‐like receptor 4 polymorphisms in Saudi population with cardiovascular diseases","year":2019,"lang":"en","type":"article","venue":"Molecular Genetics & Genomic Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"King Saud University","keywords":"Medicine; Genotype; Allele; Allele frequency; Single-nucleotide polymorphism; Population; TLR4; Internal medicine; Genotype frequency; Disease; Immunology; Bioinformatics; Receptor; Genetics; Gene; Biology; Environmental health","score_opus":0.004362381817261952,"score_gpt":0.19532262821235855,"score_spread":0.1909602463950966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2963842139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999111,0.0003679639,0.00006819142,0.00005063498,0.0000051470074,0.000003419604,0.00015453737,0.0000018276853,0.00023720384],"genre_scores_gemma":[0.9994789,0.00016663135,0.00006515963,0.000024838024,0.00000766246,0.0000033311696,0.00016086824,7.347069e-7,0.00009197035],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983704,0.000038891918,0.00002455937,0.000039900493,0.00003391544,0.00002562397],"domain_scores_gemma":[0.9995776,0.00006433312,0.00020616836,0.000028200828,0.00006781848,0.000055962122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024826653,0.00025211534,0.00018023119,0.00041606135,0.0002143561,0.0002445765,0.00015531671,0.00029107297,0.002173611],"category_scores_gemma":[0.00070973736,0.00012200229,0.00025655326,0.00053317804,0.00012957794,0.00012125214,0.00019037882,0.000253174,0.00017810531],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020497027,0.000029657489,0.9954791,0.000022674978,0.00006383964,0.00017195921,0.00009187151,0.00006318031,0.0010653512,0.000037703812,0.00014302177,0.002626689],"study_design_scores_gemma":[0.000015591788,0.00009933838,0.9977943,0.000014371215,0.00006149676,0.0009704041,0.00017622738,0.00028477336,0.00018495809,0.00006404275,0.0003301879,0.0000043522623],"about_ca_topic_score_codex":0.004113794,"about_ca_topic_score_gemma":0.0026965737,"teacher_disagreement_score":0.004113794,"about_ca_system_score_codex":0.00013820412,"about_ca_system_score_gemma":0.00021178437,"threshold_uncertainty_score":0.008179724},"labels":[],"label_agreement":null},{"id":"W2964326307","doi":"10.1016/j.bbi.2019.07.021","title":"TLR3 preconditioning induces anti-inflammatory and anti-ictogenic effects in mice mediated by the IRF3/IFN-β axis","year":2019,"lang":"en","type":"article","venue":"Brain Behavior and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Hippocampal formation; TLR3; Neuroscience; Inhibitory postsynaptic potential; Proinflammatory cytokine; Population; TLR4; Blockade; Pharmacology; Inflammation; Chemistry; Receptor; Biology; Immunology; Toll-like receptor; Medicine; Internal medicine; Innate immune system","score_opus":0.007110680207416481,"score_gpt":0.2295342534630609,"score_spread":0.2224235732556444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964326307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930646,0.0010722732,0.002342384,0.00046552403,0.00018304083,0.00005639229,0.00068515097,0.00027773145,0.0018530578],"genre_scores_gemma":[0.9914765,0.0009786893,0.001680107,0.00036764392,0.000062528045,0.0001451885,0.0005293083,0.00009012973,0.004669938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996786,0.00003364566,0.000019847968,0.00007010445,0.000047355268,0.00015048237],"domain_scores_gemma":[0.9997218,0.000012014674,0.00009539619,0.000034553377,0.000017896657,0.000118350115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002501276,0.001071421,0.00054435205,0.00070341077,0.00028991583,0.0003854173,0.00032996832,0.00059688237,0.0031161192],"category_scores_gemma":[0.00015180212,0.00035300505,0.00070316886,0.00017994441,0.0008067372,0.0004717638,0.0003129892,0.0027445704,0.000543529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0044391262,0.00038321016,0.00039103205,0.00006660067,0.00002132068,0.00014352088,0.000035150853,0.00012196676,0.99118114,0.00027571773,0.00017727063,0.0027640448],"study_design_scores_gemma":[0.00058794074,0.0051335003,0.013874457,0.000069179194,0.00017074727,0.0005415538,0.00024060265,0.0019803604,0.9736704,0.0008390148,0.00285487,0.000037284906],"about_ca_topic_score_codex":0.0006184519,"about_ca_topic_score_gemma":0.0011750975,"teacher_disagreement_score":0.0031161192,"about_ca_system_score_codex":0.00039549053,"about_ca_system_score_gemma":0.00057138404,"threshold_uncertainty_score":0.010424495},"labels":[],"label_agreement":null},{"id":"W2966201555","doi":"10.1016/j.jtho.2019.07.023","title":"Gram-Negative Pneumonia Augments Non–Small Cell Lung Cancer Metastasis through Host Toll-like Receptor 4 Activation","year":2019,"lang":"en","type":"article","venue":"Journal of Thoracic Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"TLR4; Metastasis; Lipopolysaccharide; Medicine; In vivo; Innate immune system; Toll-like receptor; Cancer research; Immunology; Immune system; Biology; Cancer; Internal medicine","score_opus":0.015332431938158336,"score_gpt":0.3449681084688333,"score_spread":0.32963567653067494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966201555","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897827,0.0037879208,0.0008089405,0.00056122907,0.00018823816,0.00007910169,0.00035920233,0.00010939711,0.004323421],"genre_scores_gemma":[0.9943849,0.0012847835,0.00054808613,0.00014420989,0.000061271494,0.00005388725,0.0003257711,0.000009255863,0.0031877744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995672,0.00012135316,0.000022064483,0.000028059427,0.00007499882,0.00018642252],"domain_scores_gemma":[0.99985576,0.000019605655,0.000032681095,0.0000146710245,0.000019535368,0.000057788668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002553923,0.00057699357,0.00034711673,0.00040848236,0.0002540292,0.00047170778,0.00021699566,0.0004026781,0.0048533645],"category_scores_gemma":[0.00029807893,0.00018352593,0.0004505221,0.00012806081,0.00030027347,0.00028280306,0.0004894989,0.0008761825,0.0006887613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017339684,0.0007050643,0.0020289202,0.00026218934,0.000029861443,0.00049023953,0.00005031961,0.00016276322,0.9829233,0.00025762917,0.00080355967,0.010552108],"study_design_scores_gemma":[0.0006182789,0.010317182,0.13381194,0.00012945588,0.0002308177,0.0024314553,0.00083459937,0.00419068,0.82904255,0.001116063,0.017230367,0.000046550234],"about_ca_topic_score_codex":0.00038323388,"about_ca_topic_score_gemma":0.00087566377,"teacher_disagreement_score":0.0048533645,"about_ca_system_score_codex":0.00029335747,"about_ca_system_score_gemma":0.00048168027,"threshold_uncertainty_score":0.016236126},"labels":[],"label_agreement":null},{"id":"W2966240095","doi":"10.1016/j.molimm.2019.07.011","title":"The novel methyltransferase SETD4 regulates TLR agonist-induced expression of cytokines through methylation of lysine 4 at histone 3 in macrophages","year":2019,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Davis; National Institutes of Health; Guangdong Science and Technology Department; Natural Science Foundation of Guangdong Province; Institute of Genetics; National Natural Science Foundation of China; Wellcome Trust","keywords":"Proinflammatory cytokine; Cell biology; p38 mitogen-activated protein kinases; Signal transduction; MAPK/ERK pathway; CXCL10; Chemistry; Histone; Chemokine; Histone methylation; Biology; Molecular biology; Inflammation; Gene expression; DNA methylation; Immunology; Biochemistry; Gene","score_opus":0.008484767178084631,"score_gpt":0.25125645877534947,"score_spread":0.24277169159726483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966240095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9831701,0.0044772597,0.008665458,0.00036430598,0.00015183723,0.000028555392,0.0008424432,0.00013661422,0.002163479],"genre_scores_gemma":[0.9936559,0.00080357265,0.0021137316,0.00009826976,0.000017582775,0.000016364664,0.0007278183,0.000022995773,0.002543745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998348,0.000021073734,0.000010761019,0.00003702886,0.000045700388,0.000050692106],"domain_scores_gemma":[0.9999056,0.00000929032,0.000027879565,0.0000125969245,0.000022670918,0.000022031676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018357877,0.00023627658,0.00026744074,0.00019509473,0.00026358664,0.0003695373,0.00032164378,0.00024072913,0.0014146502],"category_scores_gemma":[0.00015744512,0.0002138584,0.00041635672,0.00014505436,0.00027491717,0.00022375234,0.00045847782,0.00050073664,0.00037990516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002779402,0.000010973862,0.0016491899,0.00004205749,0.00002145744,0.00006062473,0.000019604038,0.000099238445,0.99534947,0.00019038694,0.000082134204,0.0021970407],"study_design_scores_gemma":[0.00003299947,0.0001382632,0.020810958,0.000010148361,0.000043692395,0.00024502233,0.000087802255,0.0015352796,0.97309566,0.00028617782,0.003701084,0.000012872887],"about_ca_topic_score_codex":0.0009135137,"about_ca_topic_score_gemma":0.0021881734,"teacher_disagreement_score":0.0014146502,"about_ca_system_score_codex":0.00054145756,"about_ca_system_score_gemma":0.0003392502,"threshold_uncertainty_score":0.0047324896},"labels":[],"label_agreement":null},{"id":"W2966568342","doi":"10.1165/rcmb.2018-0373oc","title":"Toll-like Receptor 8 Stability is Regulated by Ring Finger 216 in Response to Circulating MicroRNAs","year":2019,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"National Heart, Lung, and Blood Institute; U.S. Department of Veterans Affairs","keywords":"Ubiquitin ligase; Innate immune system; Cell biology; ARDS; Ubiquitin; microRNA; Toll-like receptor; RNA; Biology; Immune system; Protein degradation; Receptor; Small interfering RNA; TLR3; Proteasome; Immunology; Medicine; Biochemistry; Internal medicine; Gene; Lung","score_opus":0.005309645634729737,"score_gpt":0.22858972062657834,"score_spread":0.2232800749918486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966568342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99653506,0.0011661595,0.0014340034,0.00007060536,0.000028571276,0.000012034309,0.00038220143,0.00004320466,0.00032817243],"genre_scores_gemma":[0.9977642,0.00023354005,0.00076731417,0.000038624195,0.000014880448,0.00002110099,0.00029392834,0.000009656132,0.00085677346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997769,0.00003913084,0.000024529105,0.00006350835,0.000039118673,0.0000568659],"domain_scores_gemma":[0.9997476,0.000027469963,0.0001261124,0.000019106186,0.000034999575,0.00004473919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024120633,0.00025150672,0.00033742184,0.00022745461,0.00015796602,0.00035861594,0.00012188776,0.00030626528,0.0015248763],"category_scores_gemma":[0.00037308576,0.0001841582,0.00037825748,0.00012300338,0.00016744889,0.00016400959,0.0002118993,0.0002609633,0.0006438129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008688515,0.000017082906,0.0015358878,0.000032217973,0.000011950828,0.000091350135,0.000019782965,0.000035524947,0.99648064,0.00003431349,0.000067550995,0.00080482673],"study_design_scores_gemma":[0.000051628762,0.00042942047,0.08456404,0.000008069876,0.000036127443,0.00078215695,0.000077095254,0.0016440501,0.9106439,0.000101085265,0.0016450894,0.00001726687],"about_ca_topic_score_codex":0.00020970048,"about_ca_topic_score_gemma":0.00016498913,"teacher_disagreement_score":0.0015248763,"about_ca_system_score_codex":0.00029932085,"about_ca_system_score_gemma":0.00009291617,"threshold_uncertainty_score":0.005101204},"labels":[],"label_agreement":null},{"id":"W2969472985","doi":"10.1101/742098","title":"Differential remodeling of the electron transport chain is required to support TLR3 and TLR4 signaling and cytokine production in macrophages","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TLR3; Cell biology; TLR4; Cytokine; Biology; Innate immune system; Immune system; Mitochondrion; Mitochondrial ROS; Signal transduction; Toll-like receptor; Immunology","score_opus":0.009524912117987385,"score_gpt":0.21067017294071427,"score_spread":0.20114526082272688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969472985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99379563,0.00079073495,0.002961866,0.00027271744,0.00006535993,0.000015152508,0.00055807375,0.000053111664,0.0014872263],"genre_scores_gemma":[0.99526334,0.00028447394,0.0015182241,0.000083744046,0.000021188878,0.000017077651,0.00050459756,0.000027958493,0.00227946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987185,0.000020037904,0.000010530151,0.000024590036,0.000033997643,0.00003909211],"domain_scores_gemma":[0.99990773,0.000013003046,0.000032938442,0.000014156679,0.000015777443,0.000016510805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000241951,0.00015504062,0.00016096015,0.00012043585,0.00015715399,0.00028207654,0.000101426616,0.00024142308,0.0017348974],"category_scores_gemma":[0.00014747662,0.000093686474,0.00015064668,0.000102403996,0.00024184122,0.00016800752,0.0002644115,0.0003659495,0.0005733668],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117295305,0.0000069410153,0.00026276446,0.000018610193,0.0000022259649,0.00003362936,0.000009302714,0.000023217173,0.9990866,0.000063981846,0.000042988944,0.00033239136],"study_design_scores_gemma":[0.00002453474,0.00009325718,0.012073677,0.000009331896,0.000006090243,0.00018961156,0.00007664917,0.00069476693,0.9840524,0.00020521539,0.002570362,0.0000041606813],"about_ca_topic_score_codex":0.00027095588,"about_ca_topic_score_gemma":0.0003347177,"teacher_disagreement_score":0.0017348974,"about_ca_system_score_codex":0.00023633514,"about_ca_system_score_gemma":0.00016075138,"threshold_uncertainty_score":0.005803764},"labels":[],"label_agreement":null},{"id":"W2971786659","doi":"10.3390/ijms20184341","title":"Inflammatory Response to Different Toxins in Experimental Sepsis Models","year":2019,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":215,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Lipoteichoic acid; Sepsis; Lipopolysaccharide; Immune system; Inflammation; Peptidoglycan; Immunology; Biology; Medicine; Microbiology; Bacteria; Staphylococcus aureus","score_opus":0.041696733286113924,"score_gpt":0.34646266970995776,"score_spread":0.30476593642384386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971786659","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00043232282,0.9970085,0.00046940707,0.00013928587,0.00027567742,0.000021432332,0.000048591923,0.00002057172,0.0015842845],"genre_scores_gemma":[0.0019767315,0.9959097,0.0005909593,0.00016618472,0.00016851434,0.000035732417,0.000101972124,0.0000040377518,0.0010461262],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997669,0.00003999633,0.00003117717,0.00003769237,0.00010226227,0.000021988133],"domain_scores_gemma":[0.9997825,0.00006979845,0.0000415943,0.00000952205,0.00006249488,0.000034102737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062960375,0.0010726077,0.0016189744,0.0023607342,0.00022985446,0.0007811934,0.0008369185,0.0009590828,0.0022087966],"category_scores_gemma":[0.00038874702,0.00025345295,0.000557547,0.0015094926,0.00039903767,0.0007722431,0.0005942853,0.0017101843,0.0019547653],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024061314,0.00023807562,0.0002165096,0.029610032,0.00013149364,0.00044723766,0.00010624183,0.0007015219,0.028433714,0.0053807944,0.026356783,0.90813696],"study_design_scores_gemma":[0.0000389283,0.0004412545,0.0013384285,0.0036268595,0.00018434596,0.0020078744,0.000053083437,0.00014257438,0.006730847,0.0021534443,0.9832387,0.000043681655],"about_ca_topic_score_codex":0.00042748815,"about_ca_topic_score_gemma":0.00062802486,"teacher_disagreement_score":0.0023607342,"about_ca_system_score_codex":0.00042664728,"about_ca_system_score_gemma":0.0005385687,"threshold_uncertainty_score":0.007389188},"labels":[],"label_agreement":null},{"id":"W2972595417","doi":"10.1016/j.bbr.2019.112221","title":"Acute neuroinflammation elicited by TLR-3 systemic activation combined with early life stress induces working memory impairments in male adolescent mice","year":2019,"lang":"en","type":"article","venue":"Behavioural Brain Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Neuroinflammation; Working memory; Prefrontal cortex; Psychology; Oxidative stress; Endocrinology; Hippocampus; Maternal deprivation; Agonist; Internal medicine; Inflammation; Neuroscience; Medicine; Receptor; Cognition","score_opus":0.034392404631075055,"score_gpt":0.2931503431417428,"score_spread":0.25875793851066775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972595417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99680257,0.0003901586,0.0011947423,0.00017152306,0.000065925466,0.000025672956,0.0008003015,0.00010489426,0.0004441259],"genre_scores_gemma":[0.98638445,0.001082951,0.0020079203,0.00023919415,0.00004058337,0.00022592409,0.0010269227,0.00009131998,0.008900674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996829,0.000026452652,0.000024322611,0.00010257775,0.000055083397,0.00010869578],"domain_scores_gemma":[0.99957806,0.000019069455,0.00016378128,0.00003082173,0.0000359162,0.00017251617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021029715,0.0012058273,0.0006072839,0.000980337,0.00038082147,0.00051404984,0.0004728824,0.0006351107,0.0025815992],"category_scores_gemma":[0.00015163604,0.00047176803,0.00063187425,0.0002954832,0.0008583561,0.00042642019,0.00043420418,0.0021623445,0.0005208493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002356823,0.00083219045,0.0018632032,0.00006441825,0.000029244815,0.00034845606,0.00016547203,0.000077946606,0.99163014,0.00014547839,0.00015941223,0.0023273102],"study_design_scores_gemma":[0.00026245453,0.004812686,0.068162,0.00007598238,0.00017442524,0.00090112904,0.00081289624,0.0010777417,0.92069626,0.00044715308,0.002517348,0.000060049373],"about_ca_topic_score_codex":0.0015822749,"about_ca_topic_score_gemma":0.003723652,"teacher_disagreement_score":0.0025815992,"about_ca_system_score_codex":0.0004326113,"about_ca_system_score_gemma":0.0005385446,"threshold_uncertainty_score":0.008636296},"labels":[],"label_agreement":null},{"id":"W2976597620","doi":"10.1038/s41598-019-50310-0","title":"Comparative transcriptomics between species attributes reactogenicity pathways induced by the capsular group B meningococcal vaccine, 4CMenB, to the membrane-bound endotoxin of its outer membrane vesicle component","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"NIHR Oxford Biomedical Research Centre; University of Oxford; Academy of Medical Sciences; Medical Research Council; National Institute for Health and Care Research","keywords":"Reactogenicity; Bacterial outer membrane; Lipopolysaccharide; Microbiology; Vaccination; Biology; Medicine; Virology; Immunology; Gene; Antigen; Immunization; Biochemistry","score_opus":0.03488325484975867,"score_gpt":0.24372071407888243,"score_spread":0.20883745922912378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2976597620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98011774,0.0030048466,0.0030751307,0.000205438,0.000076367236,0.00006488736,0.01098565,0.00006351925,0.0024064512],"genre_scores_gemma":[0.9686428,0.0027519844,0.004174197,0.00052147167,0.00006691609,0.00045566558,0.013779482,0.000067268316,0.009540218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997551,0.000020369369,0.000010644451,0.000120117125,0.000035378653,0.000058434878],"domain_scores_gemma":[0.9998198,0.00004840366,0.00005052836,0.000011969863,0.000038348408,0.00003086516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001664603,0.0001974439,0.00035103527,0.0005282837,0.00029045562,0.00044083587,0.00014020698,0.00042467017,0.0017585318],"category_scores_gemma":[0.00024485466,0.00018616841,0.0003999906,0.0005359892,0.00025853238,0.00028578946,0.00030515075,0.0004915747,0.0004381897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043642844,0.00002317088,0.0019670548,0.000082447645,0.000018276141,0.000062625186,0.000091500704,0.000054121967,0.99535686,0.00008266786,0.00010441062,0.0017203913],"study_design_scores_gemma":[0.00006347608,0.0011998472,0.7057458,0.00010731411,0.00016796766,0.0009994513,0.001354635,0.0028972337,0.27549005,0.00069999415,0.011217031,0.00005724773],"about_ca_topic_score_codex":0.00072279776,"about_ca_topic_score_gemma":0.0010267533,"teacher_disagreement_score":0.0017585318,"about_ca_system_score_codex":0.00026179067,"about_ca_system_score_gemma":0.00019740907,"threshold_uncertainty_score":0.005882919},"labels":[],"label_agreement":null},{"id":"W2978373462","doi":"10.29173/aar53","title":"Too Much of a Good Thing: High T Cell Count Can Kill Newborns","year":2019,"lang":"en","type":"article","venue":"Alberta Academic Review","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immune system; Acquired immune system; Immunology; Immunity; CD8; Spleen; Biology; Flow cytometry; Cytotoxic T cell; Listeria monocytogenes; Bacteria","score_opus":0.007838161656608252,"score_gpt":0.23878003332805153,"score_spread":0.23094187167144328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978373462","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012108489,0.9600041,0.0011368024,0.012654619,0.0039924686,0.00002089769,0.000046611916,0.00005978916,0.009976186],"genre_scores_gemma":[0.082956485,0.87132424,0.0019109272,0.013425947,0.0037609015,0.00003947921,0.00006257158,0.000048092017,0.026471343],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9997032,0.000073220865,0.000028704206,0.00005232425,0.00009307972,0.00004945902],"domain_scores_gemma":[0.99965453,0.00013734882,0.000056000918,0.000014662254,0.00008354408,0.0000539486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007979692,0.00044852673,0.0007785796,0.0005173183,0.0003368595,0.0013518629,0.0004461201,0.0013509297,0.0035095084],"category_scores_gemma":[0.00081470935,0.000115539275,0.00036349217,0.0002849841,0.0009506194,0.0008049522,0.00044904847,0.0017578113,0.0017743593],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070014654,0.00018738171,0.005017886,0.0047908886,0.00023792089,0.0024612064,0.00037308416,0.00030023075,0.09998186,0.011953846,0.07405396,0.79994154],"study_design_scores_gemma":[0.00008915588,0.0024053284,0.020447204,0.0029246057,0.00030334326,0.01083211,0.0011002969,0.00019932743,0.04258734,0.008477203,0.9105639,0.00007009714],"about_ca_topic_score_codex":0.00077331014,"about_ca_topic_score_gemma":0.0012716982,"teacher_disagreement_score":0.0035095084,"about_ca_system_score_codex":0.00057448493,"about_ca_system_score_gemma":0.00051364035,"threshold_uncertainty_score":0.011740506},"labels":[],"label_agreement":null},{"id":"W2979830967","doi":"10.1182/blood.v122.21.3918.3918","title":"Heterodimer-Specific Stimulation Of Toll-Like Receptor 2 Induces Divergent Downstream Effects In Primary Samples Of Precursor B Cell Acute Lymphoblastic Leukemia","year":2013,"lang":"en","type":"article","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"","keywords":"TLR2; Immune system; Biology; Receptor; Toll-like receptor; In vivo; Stimulation; Cell biology; Cancer research; Immunology; Chemistry; Innate immune system; Biochemistry; Endocrinology","score_opus":0.006949633259134538,"score_gpt":0.19396529618064276,"score_spread":0.18701566292150823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979830967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99628997,0.00091472093,0.00088182586,0.00004379728,0.000032184485,0.00007881413,0.0005862258,0.000054203196,0.0011182406],"genre_scores_gemma":[0.99469215,0.0005245026,0.00096575636,0.00007853689,0.000018391354,0.00014911688,0.0016603325,0.000013333132,0.001897773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997147,0.000068473164,0.00002752691,0.000045069726,0.00006280048,0.00008143837],"domain_scores_gemma":[0.999846,0.000039159153,0.000016075943,0.000018693843,0.0000243055,0.000055711607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020484393,0.00027535707,0.00035172683,0.00033217773,0.00020056308,0.00027967716,0.00011768207,0.00017888701,0.0024782135],"category_scores_gemma":[0.00015869249,0.00015012413,0.00022792962,0.00029071188,0.00017639295,0.00010481209,0.00025444757,0.00055439956,0.00075032434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066260545,0.00012861191,0.00070088584,0.000051503885,0.0000068683826,0.00012284305,0.000035188477,0.00003258769,0.9975592,0.00002511993,0.00009163391,0.0005829241],"study_design_scores_gemma":[0.00015164702,0.0031615046,0.027401382,0.000009598335,0.000040680552,0.0012803177,0.00022805939,0.0006693782,0.9635744,0.000059182745,0.0034169492,0.000006920348],"about_ca_topic_score_codex":0.00044877417,"about_ca_topic_score_gemma":0.0007184997,"teacher_disagreement_score":0.0024782135,"about_ca_system_score_codex":0.00021907808,"about_ca_system_score_gemma":0.00016575721,"threshold_uncertainty_score":0.00829047},"labels":[],"label_agreement":null},{"id":"W2980161083","doi":"10.1128/iai.00678-19","title":"Early Growth Response 1 Deficiency Protects the Host against Pseudomonas aeruginosa Lung Infection","year":2019,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Canada Foundation for Innovation; Cystic Fibrosis Canada; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Biology; CXCL2; CXCL1; Proinflammatory cytokine; Pseudomonas aeruginosa; Chemokine; Microbiology; Immune system; Immunology; Tumor necrosis factor alpha; Inflammation; Bacteria; Chemokine receptor","score_opus":0.006958337140128836,"score_gpt":0.2211975115258504,"score_spread":0.21423917438572157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980161083","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99689436,0.0013671323,0.00062340597,0.00014344082,0.000042401793,0.000016521552,0.00030557282,0.00010722994,0.0004999331],"genre_scores_gemma":[0.9955456,0.00084733,0.00067159825,0.00014047396,0.000020431055,0.000033891956,0.0005402061,0.000028108727,0.0021723157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998029,0.00003627453,0.000018351422,0.000033458615,0.000030595285,0.00007840674],"domain_scores_gemma":[0.9997032,0.000035701847,0.0000641976,0.00003357123,0.000019902098,0.00014336892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024229036,0.00064271124,0.0006333506,0.0005399447,0.00020301173,0.00034402125,0.00037788926,0.0005776255,0.0013768944],"category_scores_gemma":[0.00018212193,0.00020927163,0.0002852774,0.00016017625,0.00032910623,0.0002948295,0.00022991626,0.0013119564,0.00035671788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013373164,0.00030636243,0.00039382494,0.000047166577,0.000014073853,0.00010175804,0.000016677179,0.00007634041,0.995214,0.000059534937,0.000093335155,0.002339585],"study_design_scores_gemma":[0.0004806583,0.01055075,0.033570547,0.0000675871,0.0001231675,0.0010801391,0.00017798152,0.0019480143,0.94833463,0.00034972237,0.0032716712,0.000045031342],"about_ca_topic_score_codex":0.0003733172,"about_ca_topic_score_gemma":0.0004895507,"teacher_disagreement_score":0.0013768944,"about_ca_system_score_codex":0.00021668202,"about_ca_system_score_gemma":0.00020924889,"threshold_uncertainty_score":0.0046061873},"labels":[],"label_agreement":null},{"id":"W2980670703","doi":"10.1177/1753425919878839","title":"IFN- <b>β</b> signalling regulates RAW 264.7 macrophage activation, cytokine production, and killing activity","year":2019,"lang":"en","type":"article","venue":"Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Institute of Infection and Immunity; Canadian Institutes of Health Research","keywords":"Cytokine; Macrophage; Context (archaeology); Immunology; Biology; Proinflammatory cytokine; Immune system; Interferon; Interferon type I; Signalling; Interleukin 10; Inflammation; Cell biology; In vitro; Genetics","score_opus":0.009302134960859099,"score_gpt":0.22369719038067537,"score_spread":0.21439505541981627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980670703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924092,0.0029072226,0.0019488328,0.00020656319,0.00007093902,0.0000302205,0.00064011465,0.00005142289,0.0017353976],"genre_scores_gemma":[0.9916413,0.0015601643,0.003280684,0.0002595399,0.00004018558,0.00007947509,0.00069188833,0.000022014989,0.0024247582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996648,0.000068143374,0.000040855448,0.000044457425,0.000059593043,0.00012210662],"domain_scores_gemma":[0.99989593,0.000023632796,0.00002392613,0.000008180575,0.00001858928,0.000029664905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034202661,0.00032282376,0.00035140562,0.00024626384,0.00016437545,0.00041174958,0.00014757889,0.000376593,0.0011917913],"category_scores_gemma":[0.000116101764,0.00013863071,0.00033932395,0.00018114776,0.00025802758,0.00021447364,0.00015508718,0.0007327705,0.0007363941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029127958,0.00004094377,0.00022907295,0.000029931172,0.0000023219263,0.000028339291,0.000009091889,0.000022965314,0.9987141,0.00003332396,0.00002877794,0.00056975376],"study_design_scores_gemma":[0.000053158856,0.0006242525,0.013579018,0.000019135929,0.000015331636,0.0001712407,0.00008804852,0.0007024197,0.9830631,0.00011539902,0.0015593629,0.000009529439],"about_ca_topic_score_codex":0.0003456944,"about_ca_topic_score_gemma":0.00044238922,"teacher_disagreement_score":0.0011917913,"about_ca_system_score_codex":0.00022774843,"about_ca_system_score_gemma":0.00024300501,"threshold_uncertainty_score":0.0039869547},"labels":[],"label_agreement":null},{"id":"W2981694477","doi":"10.1126/science.aau6391","title":"Palmitoylation of NOD1 and NOD2 is required for bacterial sensing","year":2019,"lang":"en","type":"article","venue":"Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":254,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University Health Network; SickKids Foundation; University of Toronto; Princess Margaret Cancer Centre; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; National Natural Science Foundation of China","keywords":"NOD1; Palmitoylation; NOD2; Endosome; Cell biology; Intracellular; Biology; Signal transduction; Pattern recognition receptor; Nod; Chemistry; Receptor; Innate immune system; Biochemistry; Cysteine; Gene; Enzyme","score_opus":0.010492075914991551,"score_gpt":0.24568901849876798,"score_spread":0.23519694258377644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981694477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955064,0.0011348758,0.0017599444,0.00012365973,0.000027207061,0.000012606256,0.00045057834,0.00007408684,0.00091056665],"genre_scores_gemma":[0.9953656,0.00034912652,0.0011491048,0.000057603098,0.000007659493,0.000014764172,0.0011920925,0.000024831721,0.0018391226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997714,0.000040613155,0.000033348962,0.000047998925,0.000055653287,0.000051004525],"domain_scores_gemma":[0.99971765,0.000028077999,0.00010026802,0.000030755586,0.000026285285,0.000096984506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017720126,0.00031338423,0.00024922824,0.00018582898,0.00026952257,0.00032370395,0.00020897212,0.00026605595,0.0012249735],"category_scores_gemma":[0.0002002877,0.00018223311,0.00021571832,0.00014351225,0.00024043073,0.00020144142,0.0005256697,0.0003778102,0.00074894493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001988797,0.000014084988,0.00047665514,0.000025026966,0.000004217392,0.000097407355,0.00000964434,0.0000573232,0.9983398,0.00008281192,0.000041244315,0.0006529061],"study_design_scores_gemma":[0.000034771652,0.00015473393,0.022845834,0.000010649886,0.00001642918,0.00072414073,0.00006299047,0.0014900236,0.96990114,0.00011336501,0.00463525,0.0000106017005],"about_ca_topic_score_codex":0.00076727924,"about_ca_topic_score_gemma":0.0012101595,"teacher_disagreement_score":0.0012249735,"about_ca_system_score_codex":0.0004392781,"about_ca_system_score_gemma":0.0003042302,"threshold_uncertainty_score":0.0040979385},"labels":[],"label_agreement":null},{"id":"W2981905539","doi":"10.1097/aln.0000000000002992","title":"Sevoflurane Promotes Bactericidal Properties of Macrophages through Enhanced Inducible Nitric Oxide Synthase Expression in Male Mice","year":2019,"lang":"en","type":"article","venue":"Anesthesiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Society of Nephrology","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Sevoflurane; Lipopolysaccharide; Proinflammatory cytokine; Nitric oxide synthase; In vivo; Tumor necrosis factor alpha; Medicine; Macrophage; Phagocytosis; Pharmacology; Immunology; Inflammation; Molecular biology; Microbiology; In vitro; Biology; Nitric oxide; Biochemistry; Endocrinology","score_opus":0.012141667206809799,"score_gpt":0.2179969444375515,"score_spread":0.2058552772307417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2981905539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9929885,0.0019236514,0.0027267078,0.00043151673,0.00011569344,0.00007833885,0.00060715154,0.00019949752,0.00092898036],"genre_scores_gemma":[0.9867776,0.002251316,0.0034115338,0.0004092888,0.00009915866,0.00031679944,0.0010137833,0.00007953258,0.005640948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99957436,0.000072572235,0.00003883875,0.00008883481,0.00009972376,0.00012560087],"domain_scores_gemma":[0.99958056,0.000025884685,0.00018247747,0.00003856891,0.000045484743,0.00012703094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005293147,0.0008918453,0.0005565218,0.00081186084,0.0002421834,0.00042212039,0.00036883095,0.0007204696,0.0018770519],"category_scores_gemma":[0.00019911969,0.00042752706,0.00069398066,0.00019578723,0.00047240953,0.00047145516,0.0002937585,0.0012766965,0.0006925321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013635257,0.0003387214,0.0005298138,0.00006580896,0.000010751136,0.000111584544,0.000040260835,0.000035591747,0.9957833,0.000086178836,0.00009211368,0.0015422559],"study_design_scores_gemma":[0.000504719,0.010881182,0.020753033,0.0000606319,0.000113769835,0.00082210224,0.00018491199,0.0008608995,0.96143764,0.00022569393,0.004116998,0.000038366154],"about_ca_topic_score_codex":0.00022476885,"about_ca_topic_score_gemma":0.0004186356,"teacher_disagreement_score":0.0018770519,"about_ca_system_score_codex":0.00026562583,"about_ca_system_score_gemma":0.00032815224,"threshold_uncertainty_score":0.0062793493},"labels":[],"label_agreement":null},{"id":"W2982066820","doi":"10.1101/817528","title":"Identification and characterization of zebrafish Tlr4 co-receptor Md-2","year":2019,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"National Institutes of Health; University of Oregon; American Heart Association; Pew Charitable Trusts","keywords":"Zebrafish; Biology; Amniote; Innate immune system; Danio; Gene; TLR4; Genetics; Cell biology; Immune system; Vertebrate","score_opus":0.007999532459472495,"score_gpt":0.20848851312564498,"score_spread":0.2004889806661725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982066820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.962464,0.0030503725,0.02072647,0.0005285339,0.000099131445,0.0002293963,0.009191771,0.0003291169,0.0033812444],"genre_scores_gemma":[0.9170286,0.001529675,0.042651072,0.000509105,0.000046007506,0.00034284874,0.02269598,0.00018338111,0.015013319],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999864,0.0000069205025,0.000012543176,0.000038083028,0.000051847965,0.000026673193],"domain_scores_gemma":[0.9998487,0.000017902752,0.00004016734,0.000015240033,0.000042528707,0.000035383244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012718207,0.00039251242,0.00034924794,0.0010278182,0.0002852763,0.00029155597,0.00041399672,0.00046329485,0.0026936003],"category_scores_gemma":[0.0003274232,0.00027552986,0.00046462586,0.0003592318,0.00020134867,0.0001828252,0.0003439808,0.0006123083,0.0022871534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041481053,0.000005747351,0.0008809181,0.000029907073,0.000003714543,0.0000904768,0.000009371639,0.000056398574,0.997517,0.000048902733,0.00007937198,0.0012368076],"study_design_scores_gemma":[0.00006953543,0.0003423604,0.064516135,0.00003465204,0.00010789936,0.0022236342,0.00023292331,0.005699926,0.9000452,0.00026006857,0.026411282,0.00005631559],"about_ca_topic_score_codex":0.0018101163,"about_ca_topic_score_gemma":0.002447522,"teacher_disagreement_score":0.0026936003,"about_ca_system_score_codex":0.00045311483,"about_ca_system_score_gemma":0.00039980322,"threshold_uncertainty_score":0.009010971},"labels":[],"label_agreement":null},{"id":"W2982083490","doi":"10.3390/cells8111314","title":"Suppression of the Peripheral Immune System Limits the Central Immune Response Following Cuprizone-Feeding: Relevance to Modelling Multiple Sclerosis","year":2019,"lang":"en","type":"article","venue":"Cells","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Immune system; Multiple sclerosis; Peripheral; Relevance (law); Neuroscience; Medicine; Immunology; Biology; Internal medicine","score_opus":0.016690641616344804,"score_gpt":0.20519344146702118,"score_spread":0.18850279985067636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982083490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945834,0.0013234105,0.0028806184,0.0001143039,0.00001917516,0.000060823055,0.00022687904,0.00007963862,0.00071157963],"genre_scores_gemma":[0.9938691,0.001080433,0.0035005147,0.000035905516,0.000010530733,0.00008204335,0.00016481038,0.0000120219665,0.0012446059],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999001,0.00001429435,0.000007878545,0.000020166686,0.000030581432,0.000026907834],"domain_scores_gemma":[0.9998641,0.000018201583,0.000056873625,0.000012664505,0.000013525378,0.000034727746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013839205,0.00060564204,0.0003432298,0.0002984904,0.00013542273,0.00040064316,0.00040742452,0.00047850725,0.00048746853],"category_scores_gemma":[0.00012529676,0.00011976325,0.00018530435,0.00016163933,0.0005400646,0.00024174117,0.0002196139,0.00078567496,0.0001435373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017336794,0.00004206285,0.000113676106,0.00006731638,0.000003844876,0.00004356639,0.00001956481,0.0004506604,0.99822384,0.000088797904,0.000020140022,0.00075317046],"study_design_scores_gemma":[0.000045026245,0.001441004,0.0025839156,0.000022165728,0.000042252886,0.00020273958,0.000050588653,0.004322823,0.9891187,0.00013278841,0.0020252094,0.000012682153],"about_ca_topic_score_codex":0.0019886123,"about_ca_topic_score_gemma":0.0019497242,"teacher_disagreement_score":0.0019886123,"about_ca_system_score_codex":0.00047333672,"about_ca_system_score_gemma":0.00026736682,"threshold_uncertainty_score":0.003954053},"labels":[],"label_agreement":null},{"id":"W2986038196","doi":"10.1016/j.jfma.2019.10.016","title":"Association between interleukin-8 rs4073 polymorphism and prostate cancer: A meta-analysis","year":2019,"lang":"en","type":"review","venue":"Journal of the Formosan Medical Association","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Taipei Medical University; Ministry of Science and Technology, Taiwan","keywords":"Meta-analysis; Medicine; Prostate cancer; Odds ratio; Confidence interval; Genetic model; Internal medicine; Oncology; Allele; Cochrane Library; Subgroup analysis; Gynecology; Cancer; Genetics; Gene; Biology","score_opus":0.041336091263624,"score_gpt":0.3203046275806971,"score_spread":0.2789685363170731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2986038196","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026732892,0.9681312,0.002634803,0.00042358914,0.00036701036,0.00038076207,0.0008559388,0.00010039913,0.00037348826],"genre_scores_gemma":[0.56985295,0.41522792,0.008522755,0.0010742121,0.00061237434,0.0017902851,0.0019618045,0.00009510667,0.00086256897],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99179393,0.004346329,0.0015491629,0.0011430742,0.00079436967,0.0003730436],"domain_scores_gemma":[0.9907975,0.006617349,0.0011150149,0.0005182742,0.000760042,0.00019182156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.01097515,0.003805031,0.017949618,0.0064861914,0.0008904184,0.0031908627,0.0025924386,0.0025808772,0.0033249836],"category_scores_gemma":[0.018337473,0.0019185151,0.060991712,0.007808453,0.000574275,0.0015396725,0.0017130857,0.0025309308,0.00033702026],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027837267,0.000038342147,0.008482457,0.04000988,0.9426257,0.00016892183,0.000043684915,0.0009446707,0.00031293396,0.00007467,0.00035385726,0.004161134],"study_design_scores_gemma":[0.00041449594,0.00011362064,0.003278314,0.0018546911,0.99331254,0.00007693964,0.000014854262,0.00038800118,0.00006946199,0.00011339765,0.00035088806,0.000012863976],"about_ca_topic_score_codex":0.006858966,"about_ca_topic_score_gemma":0.010613324,"teacher_disagreement_score":0.017949618,"about_ca_system_score_codex":0.0022533112,"about_ca_system_score_gemma":0.0023768875,"threshold_uncertainty_score":0.058042824},"labels":[],"label_agreement":null},{"id":"W2987629825","doi":"10.1002/cbic.201900591","title":"Regulation of Immune Activation by Optical Control of TLR1/2 Heterodimerization","year":2019,"lang":"en","type":"article","venue":"ChemBioChem","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Natural Science Foundation of China","keywords":"Chemistry; Immune system; Cell biology; Toll-like receptor; Stimulation; Receptor; Biophysics; Innate immune system; Biochemistry; Immunology; Biology; Neuroscience","score_opus":0.003067732844086089,"score_gpt":0.1889640748071233,"score_spread":0.1858963419630372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2987629825","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98917973,0.00045873702,0.0068486426,0.000100444646,0.000050723567,0.00003055537,0.000086198816,0.00006821815,0.003176759],"genre_scores_gemma":[0.9960265,0.00019043182,0.0023355493,0.00004574244,0.0000056108584,0.00002245067,0.000041642055,0.000011285848,0.0013208444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999908,0.000015465583,0.000004108584,0.000027328813,0.000022147467,0.000023049784],"domain_scores_gemma":[0.9999211,0.000022594195,0.000027452443,0.0000075860994,0.000008555595,0.000012682197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001497864,0.00030055502,0.00009062628,0.000081778526,0.00010357383,0.00019104984,0.00019989564,0.0002078502,0.0015224229],"category_scores_gemma":[0.00013301821,0.00010874604,0.00014172858,0.00007101865,0.00024532597,0.00015856937,0.0001553099,0.00047818353,0.00019884175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026717626,0.000016601141,0.000035360044,0.000018846591,0.0000017367948,0.000014900863,0.0000049345444,0.000070545466,0.9989673,0.00023205778,0.000028370408,0.0005825765],"study_design_scores_gemma":[0.000005852322,0.000066871675,0.00017849768,0.0000011423991,0.000001961975,0.000026442445,0.000006291848,0.0006786347,0.9984875,0.00003056643,0.00051379955,0.000002506692],"about_ca_topic_score_codex":0.00024704932,"about_ca_topic_score_gemma":0.00031400268,"teacher_disagreement_score":0.0015224229,"about_ca_system_score_codex":0.00026256454,"about_ca_system_score_gemma":0.000119875105,"threshold_uncertainty_score":0.005093038},"labels":[],"label_agreement":null},{"id":"W2988109514","doi":"10.1146/annurev-pathmechdis-012419-032847","title":"DAMPs, PAMPs, and LAMPs in Immunity and Sterile Inflammation","year":2019,"lang":"en","type":"review","venue":"Annual Review of Pathology Mechanisms of Disease","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":836,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Inflammation; Proinflammatory cytokine; Immunology; Immune system; Pattern recognition receptor; Innate immune system; Context (archaeology); Immunity; Biology; Damp; HMGB1; Clearance; Cell biology; Medicine","score_opus":0.018720691876834405,"score_gpt":0.3022913614956007,"score_spread":0.2835706696187663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988109514","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011106414,0.9980167,0.00010350006,0.00026457832,0.0004741978,0.000002588011,0.000009729966,0.000008183364,0.0010094144],"genre_scores_gemma":[0.00065971824,0.9973793,0.00014801246,0.00022180048,0.0004487643,0.00000425512,0.000024980342,0.0000020427858,0.0011110578],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998323,0.00003086013,0.000022730934,0.000029032768,0.000061139726,0.000023930927],"domain_scores_gemma":[0.9997688,0.000094140705,0.000035575576,0.000008601616,0.000056760437,0.00003627243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040507474,0.0008216418,0.0010003705,0.0019019173,0.00031376598,0.0011264404,0.0006221271,0.0012291078,0.0042184032],"category_scores_gemma":[0.0005388057,0.0002182225,0.00036498945,0.0017365474,0.0005544728,0.0016623623,0.00079129427,0.001708613,0.0026919867],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009110112,0.00006767957,0.00023479978,0.014135299,0.000058266305,0.00025833692,0.00010200702,0.0002953214,0.0040650596,0.008156939,0.044641122,0.927894],"study_design_scores_gemma":[0.000005150095,0.00006080736,0.00056486076,0.0019120871,0.000031657262,0.001051317,0.000057831756,0.000043115462,0.00047766883,0.002509627,0.9932748,0.000011184777],"about_ca_topic_score_codex":0.0005243666,"about_ca_topic_score_gemma":0.00080797233,"teacher_disagreement_score":0.0042184032,"about_ca_system_score_codex":0.0005637513,"about_ca_system_score_gemma":0.0010085208,"threshold_uncertainty_score":0.014111936},"labels":[],"label_agreement":null},{"id":"W2992887872","doi":"10.1557/mrc.2019.154","title":"The role of Toll-like receptor signaling in the macrophage response to implanted materials","year":2019,"lang":"en","type":"article","venue":"MRS Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Inflammation; Innate immune system; Cell biology; Macrophage; Receptor; Toll-like receptor; Signal transduction; Immune system; Immunology; Inflammatory response; Pattern recognition receptor; Materials science; Biology; Biochemistry; In vitro","score_opus":0.008844659054824563,"score_gpt":0.2491049616410413,"score_spread":0.24026030258621672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2992887872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9555332,0.030326258,0.006677067,0.001717934,0.0003028418,0.00004665996,0.00018902402,0.00006902955,0.0051379586],"genre_scores_gemma":[0.98962885,0.005588982,0.0015992373,0.00016183333,0.0000905336,0.00003121265,0.000060140672,0.000009941989,0.00282924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997502,0.00006802401,0.000020098178,0.000019522278,0.00006682189,0.000075215336],"domain_scores_gemma":[0.99986863,0.00003096302,0.000039272316,0.000011754904,0.000025840736,0.000023581744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037385727,0.00043843998,0.00023813744,0.00052317395,0.00030849007,0.0008538443,0.00024167664,0.0006570976,0.0022366256],"category_scores_gemma":[0.00038207165,0.00018072629,0.0002772588,0.000121755205,0.0004591687,0.00050852017,0.00038261493,0.0005109797,0.0004915047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010381415,0.000079939775,0.0014019023,0.00028299383,0.000015341822,0.00050695514,0.00010582779,0.000208449,0.981778,0.0016891584,0.0003101666,0.012583036],"study_design_scores_gemma":[0.00010002922,0.0021569305,0.029156381,0.00022483662,0.0000897106,0.0034872314,0.0013262685,0.0039321533,0.9393329,0.0035002106,0.016635872,0.000057510246],"about_ca_topic_score_codex":0.00018597893,"about_ca_topic_score_gemma":0.00025814495,"teacher_disagreement_score":0.0022366256,"about_ca_system_score_codex":0.00030611493,"about_ca_system_score_gemma":0.00036529443,"threshold_uncertainty_score":0.0074822903},"labels":[],"label_agreement":null},{"id":"W2992964503","doi":"10.1128/mbio.02802-19","title":"A Porcine <i>Ex Vivo</i> Lung Perfusion Model To Investigate Bacterial Pathogenesis","year":2019,"lang":"en","type":"article","venue":"mBio","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Directorate for Biological Sciences; Queen's University; Queen's University Belfast; UK Research and Innovation","keywords":"Klebsiella pneumoniae; Ex vivo; Pathogenesis; In vivo; Lung; Biology; Microbiology; Pneumonia; Immunology; Medicine; Escherichia coli; Gene","score_opus":0.008438440619352387,"score_gpt":0.2123553759575208,"score_spread":0.2039169353381684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2992964503","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7840478,0.0061838403,0.19138868,0.0010545112,0.0008262052,0.0008218908,0.0020407026,0.001079281,0.012557014],"genre_scores_gemma":[0.9426934,0.0026485552,0.04768609,0.00044630584,0.00010796761,0.00050599204,0.0016803377,0.00009925349,0.0041319733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99966764,0.000091700706,0.000026724883,0.000090878246,0.000048522186,0.000074563526],"domain_scores_gemma":[0.9996309,0.00010224798,0.00009207273,0.00007265169,0.000031339674,0.000070648624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008155214,0.0006991612,0.00041214837,0.00033187767,0.0002194816,0.0006979513,0.00045453446,0.0008646865,0.002374357],"category_scores_gemma":[0.00029880478,0.0002159206,0.0004968667,0.00016283279,0.00051674194,0.00066420797,0.00040430957,0.0016410337,0.00078939454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032458597,0.00022196927,0.000511317,0.00012572196,0.000008568616,0.00016787731,0.00003241274,0.00021481463,0.9953483,0.00038781483,0.00017431143,0.0024822077],"study_design_scores_gemma":[0.00006951641,0.008767791,0.009211774,0.000085291555,0.00008982101,0.0026408036,0.00015240721,0.004558254,0.96226424,0.00048189933,0.0116389,0.000039302326],"about_ca_topic_score_codex":0.00027601523,"about_ca_topic_score_gemma":0.00037644422,"teacher_disagreement_score":0.002374357,"about_ca_system_score_codex":0.00021089452,"about_ca_system_score_gemma":0.00032404513,"threshold_uncertainty_score":0.007942975},"labels":[],"label_agreement":null},{"id":"W2995956752","doi":"10.1038/s41598-019-55295-4","title":"Differential remodeling of the electron transport chain is required to support TLR3 and TLR4 signaling and cytokine production in macrophages","year":2019,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Ottawa; Carleton University","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"TLR3; Cell biology; TLR4; Cytokine; Biology; Innate immune system; Mitochondrion; Immune system; Mitochondrial ROS; Interferon; Inflammation; Proinflammatory cytokine; Signal transduction; Toll-like receptor; Immunology","score_opus":0.007709077414632912,"score_gpt":0.22232006863409723,"score_spread":0.2146109912194643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2995956752","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967585,0.0007991016,0.0017392737,0.000124072,0.000015675818,0.000008678874,0.00010198022,0.000014598015,0.00043807918],"genre_scores_gemma":[0.99814737,0.0003278062,0.00094913406,0.00005300417,0.000007389072,0.000013211017,0.00010350442,0.0000055870614,0.00039297264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982846,0.000031472966,0.00001842256,0.000032425265,0.000033818575,0.000055290107],"domain_scores_gemma":[0.99985886,0.000015771164,0.000060549315,0.000016951033,0.000020731615,0.000027106378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024064357,0.00013928261,0.00017981991,0.00010225011,0.0001589357,0.0002632652,0.00008908441,0.00022826431,0.0008286356],"category_scores_gemma":[0.00013783312,0.00008835059,0.00020951881,0.00009266257,0.00023818424,0.00023923891,0.00028891835,0.000331791,0.00017571842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114617906,0.000006911395,0.0003838485,0.00001371172,0.000002003382,0.000023707415,0.000008565957,0.000017458793,0.9990491,0.00003672303,0.000007808665,0.00033545715],"study_design_scores_gemma":[0.000024502287,0.00034451048,0.027997857,0.0000116758765,0.000014910675,0.0003569811,0.00014563349,0.0005730144,0.96876836,0.00021424546,0.001541341,0.0000069842163],"about_ca_topic_score_codex":0.00021888391,"about_ca_topic_score_gemma":0.00039124765,"teacher_disagreement_score":0.0008286356,"about_ca_system_score_codex":0.00021828162,"about_ca_system_score_gemma":0.00017529905,"threshold_uncertainty_score":0.0027720332},"labels":[],"label_agreement":null},{"id":"W2997008105","doi":"10.25011/cim.v42i4.33114","title":"Moderate hyperoxia plays a protective role in lung bronchial epithelial cells","year":2019,"lang":"en","type":"article","venue":"Clinical and investigative medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Shengjing Hospital; National Natural Science Foundation of China","keywords":"Hyperoxia; RELB; Apoptosis; Andrology; Western blot; Tumor necrosis factor alpha; Downregulation and upregulation; Molecular biology; Biology; Lung; Immunology; Medicine; Chemistry; Internal medicine; NFKB1; Biochemistry","score_opus":0.03930180102395223,"score_gpt":0.28335628793811474,"score_spread":0.2440544869141625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997008105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99051255,0.007114269,0.0011439952,0.00018916893,0.000047362148,0.00002499907,0.00015585028,0.000026132773,0.0007856811],"genre_scores_gemma":[0.99623847,0.0023702981,0.00031361828,0.00010519725,0.000021364678,0.000029964576,0.00018683744,0.00000254584,0.0007317106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998357,0.000024403194,0.000018566068,0.000034496956,0.000050945964,0.000035834473],"domain_scores_gemma":[0.9999136,0.0000087164635,0.000027074844,0.00000983994,0.000015222136,0.000025526804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014745608,0.0003721455,0.00026173575,0.00014204979,0.0002372952,0.00027394385,0.00015642442,0.00032393917,0.0010155936],"category_scores_gemma":[0.00010239676,0.00009100532,0.00046473372,0.00013610108,0.00027155536,0.00031515825,0.00038555329,0.00040585862,0.00014416415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031536014,0.00005134046,0.002317676,0.00017703028,0.000022340371,0.00018005782,0.000051670442,0.000051098134,0.9951604,0.000037856982,0.00004780599,0.0015874946],"study_design_scores_gemma":[0.000056551733,0.0033264018,0.12920661,0.000072014984,0.00015533504,0.0016323364,0.00083871523,0.000668722,0.8575432,0.00027511967,0.006202668,0.000022398011],"about_ca_topic_score_codex":0.00040978284,"about_ca_topic_score_gemma":0.00065864914,"teacher_disagreement_score":0.0010155936,"about_ca_system_score_codex":0.00014886005,"about_ca_system_score_gemma":0.0002152353,"threshold_uncertainty_score":0.0033975244},"labels":[],"label_agreement":null},{"id":"W2997759152","doi":"10.1096/fasebj.22.2_supplement.455","title":"Interferon gamma limits Th1 adhesion to inflamed endothelium: a nitric oxide regulatory feedback mechanism","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Cytokine; Immunology; Immune system; Cell biology; Inflammation; Tumor necrosis factor alpha; Intravital microscopy; Nitric oxide; Biology; Chemistry; Endocrinology; In vivo","score_opus":0.018875105488367412,"score_gpt":0.22225489901071782,"score_spread":0.20337979352235042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997759152","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97326714,0.012734511,0.009001501,0.0006065902,0.00018834174,0.00005639631,0.000114635346,0.00015444568,0.0038765315],"genre_scores_gemma":[0.9921922,0.0030640461,0.0021616188,0.00013866642,0.00005977475,0.00005737944,0.000053652,0.000015646921,0.0022571615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997452,0.00008166173,0.000015275718,0.00003544341,0.00004659562,0.00007582556],"domain_scores_gemma":[0.99976474,0.00007255858,0.00006248948,0.000034020984,0.00003093324,0.00003525562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045078673,0.0005204111,0.00035722938,0.00020390585,0.0001637619,0.0005522357,0.00034150478,0.00048229317,0.0013278864],"category_scores_gemma":[0.00030480968,0.00022594181,0.00025651243,0.000077255805,0.00032040058,0.00032657772,0.00035685714,0.0005539295,0.00037525807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003759384,0.000051618208,0.00046408872,0.00011236336,0.000006703897,0.0001551407,0.00003429776,0.00013518508,0.99200726,0.00044579484,0.00011917852,0.00609243],"study_design_scores_gemma":[0.00018582169,0.0011746329,0.012499129,0.00008058154,0.000081717924,0.00071867043,0.00016446912,0.004457022,0.97408706,0.0009236724,0.005609346,0.000017847686],"about_ca_topic_score_codex":0.00017508207,"about_ca_topic_score_gemma":0.00020063807,"teacher_disagreement_score":0.0013278864,"about_ca_system_score_codex":0.00028860866,"about_ca_system_score_gemma":0.00022092524,"threshold_uncertainty_score":0.0044421554},"labels":[],"label_agreement":null},{"id":"W2998831801","doi":"10.1155/2020/2704728","title":"CpG‐ODN Induces a Dose‐Dependent Enrichment of Immunological Niches in the Spleen and Lungs of Neonatal Chicks That Correlates with the Protective Immunity against <i>Escherichia coli</i>","year":2020,"lang":"en","type":"article","venue":"Journal of Immunology Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of Saskatchewan","funders":"Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Alberta Livestock and Meat Agency; Canadian Poultry Research Council","keywords":"CpG Oligodeoxynucleotide; Spleen; CpG site; Immune system; Biology; CD8; Flow cytometry; Immunity; Molecular biology; Immunology; Gene expression; Biochemistry","score_opus":0.03998664114028525,"score_gpt":0.28693389246414397,"score_spread":0.24694725132385872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998831801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99686855,0.00081265904,0.0011250881,0.000043681768,0.00002418233,0.000034359695,0.00024962347,0.00004188877,0.0007999676],"genre_scores_gemma":[0.99399155,0.00062868185,0.0020441215,0.00009401206,0.000010480249,0.00006141278,0.00037955574,0.00001596877,0.0027742658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989414,0.000015762367,0.000010819884,0.00003197042,0.000019378485,0.000027795671],"domain_scores_gemma":[0.99979,0.00004259757,0.000052777752,0.000014586412,0.000025475181,0.00007456809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012420463,0.00028013164,0.0002629456,0.0001693804,0.00007066171,0.00012819312,0.00011007907,0.00021671075,0.0009248366],"category_scores_gemma":[0.00011594145,0.0001409285,0.00015159803,0.00005098606,0.0002257495,0.00012226922,0.00014260608,0.0006089392,0.00023960369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009514659,0.000012989558,0.00015713567,0.000033748984,0.0000015980804,0.000013150888,0.000011630935,0.000010439544,0.999246,0.0000064719115,0.000006882478,0.00040481094],"study_design_scores_gemma":[0.000013794241,0.0016316115,0.014738729,0.000011071022,0.00001402532,0.00011979965,0.000050479088,0.00018282882,0.9825999,0.000011747843,0.00062173145,0.0000040969658],"about_ca_topic_score_codex":0.00080229266,"about_ca_topic_score_gemma":0.0016680849,"teacher_disagreement_score":0.0009248366,"about_ca_system_score_codex":0.00014084038,"about_ca_system_score_gemma":0.00017923208,"threshold_uncertainty_score":0.0030938387},"labels":[],"label_agreement":null},{"id":"W3000635792","doi":"10.1007/s13238-019-00687-5","title":"Activation of the pattern recognition receptor NOD1 augments colon cancer metastasis","year":2020,"lang":"en","type":"article","venue":"Protein & Cell","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences North; McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"NOD1; Cancer research; Colorectal cancer; Metastasis; Biology; Gene knockdown; MAPK/ERK pathway; Signal transduction; Cancer; Immunology; Cell biology; Cell culture; Immune system; NOD2; Innate immune system; Genetics","score_opus":0.025003431007342748,"score_gpt":0.2243056672972821,"score_spread":0.19930223628993934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000635792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99461186,0.0019412973,0.0007530113,0.0001840518,0.00003095158,0.00003035304,0.00018897539,0.0000994698,0.002160031],"genre_scores_gemma":[0.9952108,0.0011097788,0.00076733774,0.000066234024,0.000011466405,0.00003477098,0.00027864752,0.000008357731,0.0025124738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986434,0.000030161666,0.000010105292,0.000016603108,0.000029717425,0.000049080725],"domain_scores_gemma":[0.9999287,0.00001277143,0.000012382627,0.000008118324,0.000008762194,0.000029174938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012273203,0.00029172807,0.00030837746,0.0002226334,0.00009088599,0.00018094595,0.00009938929,0.0001849686,0.0019197481],"category_scores_gemma":[0.00010868228,0.00008914466,0.00019837836,0.00010399207,0.00013490295,0.00012674187,0.0002450228,0.0005946389,0.0003015326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025392935,0.000112506095,0.00024389029,0.0000927958,0.000006196049,0.00007122695,0.0000125801,0.00009342448,0.9952425,0.000048213133,0.00012693774,0.0036958752],"study_design_scores_gemma":[0.00012690108,0.005488464,0.020983778,0.000024344054,0.000051649284,0.000741871,0.00009215413,0.0026403281,0.9621424,0.000109123815,0.00758861,0.0000104784485],"about_ca_topic_score_codex":0.00048843084,"about_ca_topic_score_gemma":0.0012842653,"teacher_disagreement_score":0.0019197481,"about_ca_system_score_codex":0.00018109767,"about_ca_system_score_gemma":0.00023058672,"threshold_uncertainty_score":0.006422162},"labels":[],"label_agreement":null},{"id":"W3000881200","doi":"10.1101/2020.01.22.915017","title":"Phosphatidylinositol-4-kinase IIα licenses phagosomes for TLR4 signaling and MHC-II presentation in dendritic cells","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Child Health and Human Development; Canadian Institutes of Health Research; National Institutes of Health; Children's Hospital of Philadelphia","keywords":"Phagosome; Cell biology; Signal transducing adaptor protein; TLR4; Proinflammatory cytokine; Phosphatidylinositol; Dendritic cell; Biology; Kinase; Chemistry; Signal transduction; Immune system; Phagocytosis; Inflammation; Immunology","score_opus":0.014286304710701426,"score_gpt":0.23072932374720534,"score_spread":0.21644301903650393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000881200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9564222,0.004141859,0.018094888,0.0007605826,0.00041765734,0.000071924376,0.0023664418,0.00047327633,0.017251171],"genre_scores_gemma":[0.9722072,0.0013426127,0.0052246777,0.00009664331,0.000044583227,0.000056535107,0.0023456684,0.00013457218,0.018547555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984443,0.000015666483,0.000009357899,0.000026874613,0.000058817957,0.00004483827],"domain_scores_gemma":[0.9999238,0.0000055648266,0.000017697907,0.000017293047,0.00001275552,0.00002293969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013843032,0.00034031333,0.00025768485,0.00035980847,0.00027250437,0.0005113878,0.00016718596,0.00037806225,0.002036149],"category_scores_gemma":[0.00015939222,0.0001899232,0.00024649405,0.0002311723,0.0002607007,0.0002464231,0.00046910997,0.0006029785,0.0025398147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014876106,0.000013942053,0.00020828717,0.000042901687,0.0000037293278,0.000105177285,0.00001025242,0.000081712096,0.99743253,0.00058801944,0.0002450044,0.0011197596],"study_design_scores_gemma":[0.000031285355,0.00003716,0.004149891,0.000008465437,0.000006079136,0.0003541758,0.000031229374,0.001775566,0.9850166,0.00055617007,0.008028417,0.0000049863743],"about_ca_topic_score_codex":0.00037642126,"about_ca_topic_score_gemma":0.00031181838,"teacher_disagreement_score":0.002036149,"about_ca_system_score_codex":0.0005230341,"about_ca_system_score_gemma":0.00027858553,"threshold_uncertainty_score":0.006811619},"labels":[],"label_agreement":null},{"id":"W3001385246","doi":"10.1007/s10585-020-10018-2","title":"Toll-like receptors: exploring their potential connection with post-operative infectious complications and cancer recurrence","year":2020,"lang":"en","type":"review","venue":"Clinical & Experimental Metastasis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital; McGill University; McGill University Health Centre; Montreal General Hospital","funders":"","keywords":"Cancer; Metastasis; Innate immune system; Surgical oncology; Immunology; Toll-like receptor; Medicine; Immune system; Receptor; Cancer cell; Cancer research; Biology; Internal medicine","score_opus":0.12418506306907891,"score_gpt":0.4040793169401484,"score_spread":0.27989425387106953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3001385246","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006619975,0.99934155,0.000046358862,0.0001905532,0.00017068928,0.0000014453466,0.000008083869,0.0000018664758,0.0001732989],"genre_scores_gemma":[0.00060375454,0.99844414,0.0000839156,0.00015467536,0.00044976044,0.0000034944896,0.00001948763,5.007079e-7,0.00024035906],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981433,0.000037204238,0.000029726087,0.00003135523,0.000063974185,0.000023395285],"domain_scores_gemma":[0.9995672,0.00023705882,0.00006915761,0.000008568552,0.0000819008,0.000036127625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007567126,0.00092000153,0.0014315882,0.001606258,0.000171747,0.0011576876,0.0006763931,0.001281073,0.0028420622],"category_scores_gemma":[0.0010897383,0.0002367946,0.00048436984,0.0020123818,0.0005170001,0.0010385638,0.000715812,0.0015931862,0.0012305457],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022541922,0.00006951739,0.0005236467,0.011788723,0.00011279192,0.00019174535,0.000044399956,0.00028932173,0.0009729111,0.0023616932,0.026104936,0.9573149],"study_design_scores_gemma":[0.00010830041,0.00040152308,0.00414672,0.008580981,0.00050391007,0.0024229782,0.00020300265,0.0003024924,0.0006804016,0.0036178648,0.97897846,0.00005344627],"about_ca_topic_score_codex":0.00076596206,"about_ca_topic_score_gemma":0.0013785639,"teacher_disagreement_score":0.0028420622,"about_ca_system_score_codex":0.0004510386,"about_ca_system_score_gemma":0.0011762264,"threshold_uncertainty_score":0.009507656},"labels":[],"label_agreement":null},{"id":"W3003044105","doi":"10.1016/s2213-2600(19)30368-6","title":"Sepsis-associated acute respiratory distress syndrome in individuals of European ancestry: a genome-wide association study","year":2020,"lang":"en","type":"article","venue":"The Lancet Respiratory Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"European Social Fund; National Heart, Lung, and Blood Institute; Center for Sepsis Control and Care; European Regional Development Fund; Instituto de Salud Carlos III; Novo Nordisk; Ministerie van Onderwijs, Cultuur en Wetenschap; National Institutes of Health; Bayer HealthCare; AstraZeneca; Pfizer","keywords":"Medicine; Genome-wide association study; Sepsis; Acute respiratory distress; Respiratory distress; MEDLINE; Intensive care medicine; Association (psychology); Genetic association; Pediatrics; Internal medicine; Single-nucleotide polymorphism; Genetics; Genotype; Gene; Surgery; Lung","score_opus":0.05547419262797275,"score_gpt":0.29532003940472573,"score_spread":0.23984584677675297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003044105","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9983083,0.0007044788,0.00021884406,0.00010426411,0.00002343667,0.0000047342496,0.00025880343,0.000005009094,0.00037204393],"genre_scores_gemma":[0.99928504,0.0001847128,0.00014910244,0.000052308296,0.000021095517,0.000005052327,0.00013586476,0.000004088558,0.00016281319],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998642,0.0004128776,0.00012164038,0.00056024396,0.000089881745,0.00017330301],"domain_scores_gemma":[0.9989147,0.0002478293,0.00032659416,0.00018679255,0.000112377194,0.0002116195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012491001,0.00072489376,0.00079508155,0.0007300489,0.0010638969,0.0010472938,0.0006467393,0.0015540703,0.001806086],"category_scores_gemma":[0.0017492223,0.00057590567,0.0013487334,0.001704669,0.00073523645,0.00067399326,0.0009908146,0.0011147562,0.0002052688],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011751648,0.00008748663,0.98992985,0.000036258098,0.0017300842,0.0005841713,0.000291683,0.00009323842,0.0037808104,0.00012722274,0.00025581836,0.0019082103],"study_design_scores_gemma":[0.00002512126,0.00008905785,0.998481,0.000011437091,0.0004174127,0.0003478806,0.00020340607,0.00012670015,0.000070168266,0.00006362511,0.0001549579,0.000009233376],"about_ca_topic_score_codex":0.006846225,"about_ca_topic_score_gemma":0.006571222,"teacher_disagreement_score":0.006846225,"about_ca_system_score_codex":0.0002447741,"about_ca_system_score_gemma":0.0002952244,"threshold_uncertainty_score":0.013612747},"labels":[],"label_agreement":null},{"id":"W3004519811","doi":"10.1101/2020.02.08.940023","title":"ABCF1 regulates dsDNA-induced immune responses in human airway epithelial cells","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Waterloo; McMaster University","funders":"Canadian Institutes of Health Research; British Columbia Lung Association","keywords":"Biology; Innate immune system; Respiratory epithelium; Cell biology; Gene knockdown; CXCL10; Immune system; Transcriptome; RIG-I; Epithelium; Immunology; Gene expression; Gene; Chemokine; Genetics","score_opus":0.015716261654899963,"score_gpt":0.22806530037542813,"score_spread":0.21234903872052818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004519811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9821539,0.007782256,0.0045376983,0.00059537636,0.00015809963,0.00009051148,0.0021381327,0.00018722766,0.0023568813],"genre_scores_gemma":[0.9901211,0.0013947445,0.0022035518,0.00022289918,0.000025290798,0.00012756228,0.00261765,0.0000252021,0.003261985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996617,0.000044360724,0.000030502959,0.000082853665,0.000079332174,0.000101275014],"domain_scores_gemma":[0.9998728,0.000025067788,0.000019648669,0.000018331102,0.000043169082,0.000020945361],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023612432,0.00018762953,0.00032076827,0.00030367583,0.00028845845,0.00046280384,0.00017061848,0.00048340877,0.0031279365],"category_scores_gemma":[0.0002261336,0.00015011642,0.0003487096,0.00024970822,0.0002011963,0.00017449108,0.00020018271,0.00045392872,0.0012598796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012853413,0.00003203311,0.00094715034,0.000102454746,0.0000073967544,0.000093842005,0.000033070788,0.00003677107,0.9962127,0.00007646047,0.0003306135,0.001999017],"study_design_scores_gemma":[0.00004758909,0.0002907891,0.037269656,0.00002895506,0.0000358986,0.0010474455,0.00021967963,0.0020290818,0.9434889,0.000115054994,0.015414588,0.0000123734],"about_ca_topic_score_codex":0.0011625272,"about_ca_topic_score_gemma":0.0011368374,"teacher_disagreement_score":0.0031279365,"about_ca_system_score_codex":0.00038786454,"about_ca_system_score_gemma":0.00023859697,"threshold_uncertainty_score":0.010463953},"labels":[],"label_agreement":null},{"id":"W3004546115","doi":"10.1016/j.isci.2020.100891","title":"Toll-Interacting Protein Regulates Immune Cell Infiltration and Promotes Colitis-Associated Cancer","year":2020,"lang":"en","type":"article","venue":"iScience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Novartis Foundation; Université de Lausanne; AbbVie","keywords":"FOXP3; Colitis; Cancer research; CD8; Azoxymethane; Immune system; Immunology; Biology; Cancer; Colorectal cancer","score_opus":0.01282196432228782,"score_gpt":0.2366854686636927,"score_spread":0.22386350434140487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004546115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953896,0.0014058241,0.0010719604,0.00012116308,0.000026410784,0.000008680065,0.0002867272,0.000118256154,0.0015714421],"genre_scores_gemma":[0.996018,0.00038972957,0.00054995384,0.00003700787,0.000010436081,0.0000136864255,0.00032897235,0.000019391173,0.0026328042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998534,0.000020204976,0.000008614683,0.000026218122,0.000030582974,0.000060955586],"domain_scores_gemma":[0.99984,0.000011450595,0.0000420077,0.000011088319,0.0000109063385,0.000084443185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001093066,0.0004624713,0.0002103122,0.0005068588,0.00016569764,0.00030305862,0.00013803199,0.00025834882,0.002665803],"category_scores_gemma":[0.00009771875,0.000118917844,0.00020162953,0.00012555403,0.00024429336,0.00015006632,0.00019127165,0.0008543322,0.0004849385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003812425,0.000045319674,0.0010213878,0.000033088287,0.0000065452523,0.00011002745,0.000008698348,0.000032058713,0.99656206,0.000076591066,0.000076624674,0.0016464046],"study_design_scores_gemma":[0.00008112023,0.00059370656,0.065913595,0.000022925635,0.00006930149,0.002021726,0.00010408626,0.001687124,0.9234224,0.00024329143,0.0058288937,0.000011778911],"about_ca_topic_score_codex":0.00022164788,"about_ca_topic_score_gemma":0.0004349076,"teacher_disagreement_score":0.002665803,"about_ca_system_score_codex":0.00020006609,"about_ca_system_score_gemma":0.00014228253,"threshold_uncertainty_score":0.008918047},"labels":[],"label_agreement":null},{"id":"W3006135268","doi":"10.1097/cce.0000000000000083","title":"Importance of Endotoxin Clearance in Endotoxemic Septic Shock: An Analysis From the Evaluating Use of PolymyxinB Hemoperfusion in a Randomized Controlled Trial of Adults Treated for Endotoxemic Septic Shock (EUPHRATES) Trial","year":2020,"lang":"en","type":"article","venue":"Critical Care Explorations","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Tornado Spectral Systems (Canada)","funders":"","keywords":"Hemoperfusion; Septic shock; Medicine; Polymyxin B; Randomized controlled trial; Polymyxin; Mechanical ventilation; Shock (circulatory); Internal medicine; Anesthesia; Sepsis; Antibiotics; Biology; Hemodialysis; Microbiology","score_opus":0.0505312521980987,"score_gpt":0.3290081359144123,"score_spread":0.27847688371631363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3006135268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863354,0.009396117,0.0007622785,0.0008462588,0.00027730974,0.0011707358,0.0005107118,0.000037324837,0.0006638036],"genre_scores_gemma":[0.9943245,0.0022496765,0.00081001053,0.00053919706,0.00029973063,0.00090493774,0.00046921792,0.000010243658,0.00039247907],"study_design_codex":"randomized_trial","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9930032,0.005775147,0.00038373322,0.0003583373,0.00024700232,0.00023248908],"domain_scores_gemma":[0.99214387,0.004383701,0.0020020334,0.00045587492,0.00027190353,0.0007426686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0075029,0.0012428659,0.0033503615,0.00030622116,0.00026344095,0.0011650675,0.0006580346,0.0012518348,0.0028153532],"category_scores_gemma":[0.009470169,0.00041871183,0.0040838164,0.00034603002,0.0008523153,0.0007063895,0.00046770976,0.002133377,0.00018621457],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.9810035,0.000997141,0.003869685,0.00074673764,0.0049746325,0.0000376036,0.000030631392,0.00030563833,0.0008214146,0.00008274832,0.00033246563,0.0067978436],"study_design_scores_gemma":[0.94214,0.03683035,0.012397134,0.00010913421,0.0065325657,0.000046345693,0.000029967234,0.0010444018,0.00035602198,0.00013566451,0.00035760022,0.000020845819],"about_ca_topic_score_codex":0.0007217818,"about_ca_topic_score_gemma":0.0012265209,"teacher_disagreement_score":0.0075029,"about_ca_system_score_codex":0.00057193515,"about_ca_system_score_gemma":0.00090431236,"threshold_uncertainty_score":0.039679587},"labels":[],"label_agreement":null},{"id":"W3007043517","doi":"10.1016/j.molmed.2019.11.006","title":"Bacterial Peptidoglycan as a Driver of Chronic Brain Inflammation","year":2020,"lang":"en","type":"review","venue":"Trends in Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Stichting Zabawas; ASCRS Research Foundation","keywords":"Neuroinflammation; Inflammation; Peptidoglycan; Innate immune system; Immune system; Pattern recognition receptor; Biology; Proinflammatory cytokine; Immunology; Receptor; Experimental autoimmune encephalomyelitis; Cell biology; Bacteria","score_opus":0.016567362609482297,"score_gpt":0.30862955260136127,"score_spread":0.292062189991879,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007043517","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006119661,0.9986136,0.00008585964,0.00039536777,0.0004248829,0.0000017194124,0.000014218675,0.000004981519,0.0003982527],"genre_scores_gemma":[0.0004093332,0.99834585,0.0000926746,0.00025617555,0.0005704858,0.0000029305143,0.000022418593,8.064127e-7,0.00029930196],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998671,0.0000215515,0.000017425527,0.000027850694,0.000047416575,0.000018635303],"domain_scores_gemma":[0.99963987,0.00015750465,0.000050243663,0.000009223065,0.00009235629,0.000050708088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058926584,0.0009172466,0.0012902356,0.0011008028,0.0001759748,0.0012156253,0.0006358218,0.0013653127,0.002675267],"category_scores_gemma":[0.00086514227,0.00020748626,0.0003125163,0.0012193727,0.00055023097,0.0011269383,0.0007615464,0.0021936418,0.0016167515],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016222498,0.000050801977,0.00030609214,0.008830566,0.00008981413,0.00019229947,0.000023576698,0.00027467217,0.0016486194,0.003943799,0.053782005,0.9306955],"study_design_scores_gemma":[0.00004939827,0.00013789629,0.0017605847,0.004392256,0.00020604354,0.0011307236,0.000069622874,0.0002084079,0.00058146607,0.004370436,0.98706007,0.000033079774],"about_ca_topic_score_codex":0.0011565351,"about_ca_topic_score_gemma":0.0020608823,"teacher_disagreement_score":0.002675267,"about_ca_system_score_codex":0.0006073948,"about_ca_system_score_gemma":0.001344338,"threshold_uncertainty_score":0.008949637},"labels":[],"label_agreement":null},{"id":"W3007534389","doi":"10.1093/jcag/gwz047.234","title":"A235 THE INFLUENCE OF IL10 ON COLITIS DEVELOPMENT IN NOD2 DEFICIENT MICE","year":2020,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Western University","funders":"","keywords":"NOD2; Interleukin 10; Colitis; Inflammation; Feces; Biology; Immunology; Medicine; Cytokine; Internal medicine; Crohn's disease; Disease; Microbiology","score_opus":0.006898516740495641,"score_gpt":0.19261038309059775,"score_spread":0.18571186635010212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007534389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932073,0.0010557193,0.0013292519,0.00021057318,0.00005907279,0.00004149054,0.0018927744,0.00014353888,0.0020603186],"genre_scores_gemma":[0.9868117,0.0007060813,0.002594547,0.0001901291,0.000022805214,0.00014372215,0.0015314164,0.00009223832,0.007907358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968565,0.000050263025,0.00003469864,0.000098880795,0.000053420183,0.00007711221],"domain_scores_gemma":[0.9993616,0.000048616068,0.0001954495,0.00004701675,0.000034230314,0.00031309383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019730144,0.000680082,0.0003420258,0.0006465772,0.00021405116,0.00048383317,0.00027262804,0.00067955005,0.0037464206],"category_scores_gemma":[0.00016529697,0.00031752695,0.00033097685,0.00018042393,0.00038246377,0.00036910916,0.00026176995,0.0011653756,0.0008974663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010337944,0.0001452166,0.0006298853,0.00004192281,0.000006525141,0.00011487031,0.000017015185,0.00004158994,0.9970233,0.000053651038,0.00006336388,0.0008288693],"study_design_scores_gemma":[0.00030143568,0.003331157,0.036911722,0.00006121929,0.00007001992,0.0015806124,0.00021659007,0.0013466903,0.95225924,0.00017424974,0.0037206882,0.000026345713],"about_ca_topic_score_codex":0.00045061656,"about_ca_topic_score_gemma":0.0007427053,"teacher_disagreement_score":0.0037464206,"about_ca_system_score_codex":0.00029161462,"about_ca_system_score_gemma":0.00019723034,"threshold_uncertainty_score":0.012533009},"labels":[],"label_agreement":null},{"id":"W3008129052","doi":"10.1074/jbc.ra119.011633","title":"Tristetraprolin regulates necroptosis during tonic Toll-like receptor 4 (TLR4) signaling in murine macrophages","year":2020,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Ottawa","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"TLR4; Tristetraprolin; Necroptosis; Toll-like receptor; Receptor; Tonic (physiology); Chemistry; Cell biology; Toll; Neuroscience; Immunology; Biology; Innate immune system; Biochemistry; Untranslated region; Messenger RNA; Gene; Apoptosis; Programmed cell death","score_opus":0.015550217212892785,"score_gpt":0.22291752584565847,"score_spread":0.20736730863276567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008129052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99638027,0.0007565771,0.0011122978,0.00010842909,0.00003598295,0.000044051678,0.00047199003,0.00009424383,0.0009961801],"genre_scores_gemma":[0.99408144,0.00064001634,0.001676316,0.00007357222,0.00001679324,0.00012098966,0.00060476025,0.000031133844,0.0027549397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974734,0.000053627253,0.000031007723,0.000044275508,0.000040242016,0.00008350372],"domain_scores_gemma":[0.99977976,0.000022216296,0.000072876115,0.00001721858,0.000013126241,0.00009487114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022222198,0.00048728666,0.0003019733,0.00039991472,0.0001718725,0.00029785847,0.00026048828,0.00046330102,0.0012915314],"category_scores_gemma":[0.00011224074,0.00023509144,0.00031611035,0.00021201228,0.0004138507,0.00033367172,0.00018763651,0.00090802147,0.00043273065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005777296,0.00007446636,0.00007901241,0.000027871009,0.0000040102245,0.000053931806,0.000015307325,0.000058291498,0.9987507,0.000068838934,0.000025596908,0.00026431275],"study_design_scores_gemma":[0.00009436629,0.001138495,0.0030873956,0.000010622587,0.00002202011,0.000231487,0.000039653853,0.0007783597,0.9936935,0.00006854871,0.0008275974,0.000007891463],"about_ca_topic_score_codex":0.00040674073,"about_ca_topic_score_gemma":0.00066596817,"teacher_disagreement_score":0.0012915314,"about_ca_system_score_codex":0.00034430705,"about_ca_system_score_gemma":0.00024024122,"threshold_uncertainty_score":0.0043206215},"labels":[],"label_agreement":null},{"id":"W3009684863","doi":"10.1101/2020.03.05.978767","title":"The antitumoral activity of TLR7 ligands is corrupted by the microenvironment of pancreatic tumors","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Innovation Cluster (Canada)","funders":"Région Occitanie Pyrénées-Méditerranée","keywords":"Pancreatic cancer; Cancer research; Receptor; Toll-like receptor; In vivo; Carcinogenesis; TLR7; Tumor microenvironment; Pancreatic tumor; Cancer; Immune system; Innate immune system; Biology; Immunology; Medicine; Internal medicine","score_opus":0.009906391642379176,"score_gpt":0.202499815771044,"score_spread":0.19259342412866484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009684863","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9810049,0.0048149917,0.0052350694,0.0005354028,0.00013689284,0.000020311629,0.00052006496,0.00016730349,0.0075650425],"genre_scores_gemma":[0.9932253,0.0010873504,0.0012359819,0.00012727226,0.000040025578,0.000019253002,0.00049093406,0.000038969436,0.0037349379],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999882,0.000025957464,0.0000072729517,0.000021987036,0.000030415727,0.00003243736],"domain_scores_gemma":[0.9999237,0.000014599691,0.000015836486,0.000013793871,0.000010052372,0.000021986154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016018204,0.0002115916,0.00020813558,0.00020658885,0.000118594435,0.00044153,0.00008128009,0.0002352715,0.0025521552],"category_scores_gemma":[0.00011416299,0.000094440635,0.00017411381,0.00009805956,0.00018738299,0.00016669395,0.00029450556,0.0005543782,0.00094011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001495542,0.0000176462,0.00027051082,0.000025994372,0.0000025967847,0.00006332112,0.0000068210097,0.00007252177,0.9966545,0.00026751205,0.00012240458,0.0023465422],"study_design_scores_gemma":[0.000014677091,0.00013905874,0.0036663855,0.0000063864127,0.000006505948,0.00051545666,0.00003656134,0.00077123684,0.9899554,0.00035583522,0.0045290594,0.0000034082861],"about_ca_topic_score_codex":0.0000720004,"about_ca_topic_score_gemma":0.000046139976,"teacher_disagreement_score":0.0025521552,"about_ca_system_score_codex":0.00014987883,"about_ca_system_score_gemma":0.00013676469,"threshold_uncertainty_score":0.008537769},"labels":[],"label_agreement":null},{"id":"W3012654932","doi":"10.4049/jimmunol.2000022","title":"Neutrophils Recirculate through Lymph Nodes to Survey Tissues for Pathogens","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Lymph; Lymph node; High endothelial venules; Lymph node stromal cell; Lymphatic system; Population; Immunology; Biology; Immune system; Medicine; Cell biology; Pathology","score_opus":0.041093596574217954,"score_gpt":0.2758119614755528,"score_spread":0.23471836490133485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012654932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97727,0.004079829,0.014847743,0.0002132413,0.000057632365,0.00008119394,0.00034724412,0.00022092112,0.0028822396],"genre_scores_gemma":[0.9857707,0.0009149384,0.0071852845,0.00006682141,0.000022522017,0.000051506282,0.00022341905,0.000021340995,0.00574346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998543,0.000030276091,0.000008864753,0.00004011164,0.00002487837,0.000041562387],"domain_scores_gemma":[0.9998605,0.00001641343,0.00004093436,0.000019177902,0.000027801498,0.000035241486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001474426,0.00038401617,0.00023204366,0.00034283625,0.00022025075,0.00045725927,0.00020507669,0.00032069182,0.0022694103],"category_scores_gemma":[0.000109583285,0.00014280039,0.00018726493,0.00010821372,0.0002339874,0.00046449146,0.00032891307,0.0004991155,0.0010195115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121975376,0.00002225501,0.0017935144,0.00003997151,0.000003761691,0.00010950571,0.000043513228,0.000053060412,0.99390817,0.00019438627,0.00007824274,0.0036316728],"study_design_scores_gemma":[0.000041460135,0.0012875798,0.034335222,0.000056614557,0.000032920438,0.0017947643,0.0003279951,0.0022540828,0.94877326,0.0007163583,0.01035996,0.000019792438],"about_ca_topic_score_codex":0.00035003424,"about_ca_topic_score_gemma":0.00047398623,"teacher_disagreement_score":0.0022694103,"about_ca_system_score_codex":0.00021409504,"about_ca_system_score_gemma":0.00017590904,"threshold_uncertainty_score":0.007591963},"labels":[],"label_agreement":null},{"id":"W3012861332","doi":"10.1073/pnas.1920193117","title":"15-Epi-LXA <sub>4</sub> and 17-epi-RvD1 restore TLR9-mediated impaired neutrophil phagocytosis and accelerate resolution of lung inflammation","year":2020,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research; Canadian HIV Trials Network, Canadian Institutes of Health Research; Government of Canada; Yale University","keywords":"Phagocytosis; Inflammation; Apoptosis; Neutrophil extracellular traps; Biology; Granulocyte; Immunology; Receptor; Innate immune system; Microbiology; Cell biology; Immune system; Biochemistry","score_opus":0.0313649025231726,"score_gpt":0.25766139822519,"score_spread":0.22629649570201743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3012861332","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99602854,0.0009887142,0.00137931,0.00010882594,0.00004518453,0.000022220263,0.0002947051,0.00006729343,0.0010652278],"genre_scores_gemma":[0.99287087,0.0004904178,0.0019760916,0.00008248955,0.000012877645,0.000031042244,0.000564282,0.00001858414,0.0039533367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998888,0.00002391168,0.00001549239,0.0000132939485,0.00002418157,0.000034328583],"domain_scores_gemma":[0.99991727,0.000011580003,0.000021731277,0.000009896064,0.0000060085376,0.000033557386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013759662,0.00023123225,0.00029662094,0.00017161015,0.00008377646,0.00023163119,0.0001593682,0.00024440704,0.002430788],"category_scores_gemma":[0.00010344256,0.000112421,0.00020184228,0.00007630617,0.0003125097,0.00018139942,0.00018009669,0.0006026708,0.00056255737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015948074,0.00017748782,0.00020875354,0.000051200503,0.000010158879,0.0000685974,0.000012928168,0.00010885016,0.9949503,0.00016580739,0.00006747562,0.002583611],"study_design_scores_gemma":[0.00007098616,0.0014247355,0.0021212124,0.000004578726,0.000013776001,0.00024025442,0.00003192982,0.0005425816,0.9933339,0.000069458576,0.0021433614,0.0000033221445],"about_ca_topic_score_codex":0.00034116962,"about_ca_topic_score_gemma":0.00042417477,"teacher_disagreement_score":0.002430788,"about_ca_system_score_codex":0.00025507231,"about_ca_system_score_gemma":0.00022395723,"threshold_uncertainty_score":0.008131802},"labels":[],"label_agreement":null},{"id":"W3014053429","doi":"10.1038/s41598-020-61683-y","title":"Mucosal delivery of CpG-ODN mimicking bacterial DNA via the intrapulmonary route induces systemic antimicrobial immune responses in neonatal chicks","year":2020,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of Saskatchewan","funders":"Western Economic Diversification Canada; Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada; Chicken Farmers of Saskatchewan; Alberta Livestock and Meat Agency; Government of Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"CpG Oligodeoxynucleotide; Cytokine; CpG site; Immune system; Immunology; Tumor necrosis factor alpha; Lipopolysaccharide; Immunity; Interleukin 10; Innate immune system; Biology; Lung; Medicine; Andrology; Gene expression; Internal medicine; Gene; DNA methylation","score_opus":0.011823734274488693,"score_gpt":0.21348691713518478,"score_spread":0.2016631828606961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014053429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801046,0.000503525,0.001034666,0.00003611828,0.000023247061,0.000025227564,0.00010290926,0.000021608404,0.00024223184],"genre_scores_gemma":[0.9959961,0.00046472333,0.0017453737,0.0000740734,0.000008806677,0.000043131826,0.00013960032,0.0000090012345,0.0015192042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998983,0.0000142324325,0.000009332932,0.000029825022,0.000022584994,0.00002573467],"domain_scores_gemma":[0.9998468,0.000025912697,0.000044871656,0.000012312846,0.000024211893,0.000045907378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015885934,0.00028832015,0.00031841092,0.00014218705,0.000080225815,0.00016118836,0.00012434411,0.00027441335,0.0006991859],"category_scores_gemma":[0.00017279829,0.00013683813,0.00016999345,0.000047836405,0.00027510125,0.00016900724,0.00014914975,0.0007078258,0.00019730144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018498374,0.000024818504,0.00016624334,0.000032567415,0.0000016416086,0.000020961432,0.000017206068,0.000019707451,0.99904007,0.0000059489753,0.0000076524675,0.00047809136],"study_design_scores_gemma":[0.00002279562,0.005263722,0.014931276,0.00001804748,0.000019550413,0.00016597436,0.00015380628,0.00050252065,0.978239,0.000017726179,0.0006587441,0.0000068419354],"about_ca_topic_score_codex":0.0007206848,"about_ca_topic_score_gemma":0.0011147386,"teacher_disagreement_score":0.0007206848,"about_ca_system_score_codex":0.00017321995,"about_ca_system_score_gemma":0.00015715488,"threshold_uncertainty_score":0.0023390055},"labels":[],"label_agreement":null},{"id":"W3016975310","doi":"10.1096/fasebj.2020.34.s1.04263","title":"Interplay between the Glucocorticoid Receptor and Inflammatory Signaling leads to Enhanced TLR2 Expression in Pulmonary Epithelial Cells","year":2020,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Chromatin immunoprecipitation; TLR2; A549 cell; Glucocorticoid receptor; Transcription factor; Receptor; Repressor; Biology; Molecular biology; Innate immune system; Chemistry; Cell biology; Promoter; Cancer research; Glucocorticoid; Gene expression; Apoptosis; Immunology; Internal medicine; Gene; Medicine","score_opus":0.011031694295457401,"score_gpt":0.23995961589653617,"score_spread":0.22892792160107878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3016975310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9784622,0.0077923876,0.006040736,0.0005906754,0.00017124659,0.000054785396,0.0023641936,0.00017087594,0.0043528657],"genre_scores_gemma":[0.99212426,0.0016359709,0.00168502,0.00024220117,0.000032127395,0.00005905797,0.0013453325,0.000020463018,0.002855515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995185,0.00008573272,0.00003604802,0.000098670884,0.000108322165,0.0001527283],"domain_scores_gemma":[0.9999118,0.00001442929,0.00001746314,0.000015567985,0.0000151242475,0.000025504736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019863009,0.00022528892,0.0003444016,0.00015529775,0.00018150409,0.0005136391,0.00016246896,0.00037353416,0.002301325],"category_scores_gemma":[0.00013469484,0.00019284507,0.0005121417,0.00019043802,0.00018644787,0.00018588568,0.00027546316,0.0005422708,0.0009172422],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014709524,0.000015288419,0.00029697653,0.00005961435,0.0000063424327,0.000049924314,0.000012681558,0.00003295324,0.9984889,0.000049555318,0.00008074726,0.0007599228],"study_design_scores_gemma":[0.000065950735,0.0005134405,0.026378872,0.000028618026,0.00005153486,0.00071798655,0.0002496967,0.0014943546,0.96244,0.00015428399,0.007886051,0.000019162237],"about_ca_topic_score_codex":0.0007541357,"about_ca_topic_score_gemma":0.00108562,"teacher_disagreement_score":0.002301325,"about_ca_system_score_codex":0.00031861346,"about_ca_system_score_gemma":0.00024470783,"threshold_uncertainty_score":0.0076987147},"labels":[],"label_agreement":null},{"id":"W3021395869","doi":"10.1101/2020.05.08.084723","title":"Xela DS2 and Xela VS2: two novel skin epithelial-like cell lines from adult African clawed frog ( <i>Xenopus laevis</i> ) and their response to an extracellular viral dsRNA analogue","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada; University of Waterloo","keywords":"Xenopus; Biology; Cell biology; Amphibian; Extracellular; Cell culture; African clawed frog; Epithelium; Frog Skin; Syncytium; Immunology; Gene; Genetics; Chemistry; Ecology","score_opus":0.009957871363670696,"score_gpt":0.2057918890109039,"score_spread":0.1958340176472332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021395869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98930186,0.0009514361,0.004796591,0.00015161691,0.00006802257,0.00016136181,0.002173846,0.00008123552,0.002313952],"genre_scores_gemma":[0.9722357,0.0008054203,0.0066065434,0.00012499084,0.000032405358,0.00028563332,0.0074731195,0.00004707507,0.012389047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969554,0.00005296001,0.00005221368,0.000058823447,0.000087172106,0.000053379965],"domain_scores_gemma":[0.9997813,0.000043220825,0.000045750705,0.000046715166,0.000030496749,0.000052500287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000297712,0.00031430428,0.00023857196,0.00033651094,0.0002948056,0.00033645396,0.00027721704,0.0003860728,0.0028342055],"category_scores_gemma":[0.00016488438,0.00017966154,0.0004479973,0.00023563585,0.0002260877,0.00024295542,0.00024736254,0.000655053,0.0008878786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068872476,0.00003284871,0.0004171896,0.000024343297,0.0000052857017,0.00011361812,0.000029085502,0.000020328496,0.99874854,0.00008893935,0.000052633353,0.0003983878],"study_design_scores_gemma":[0.000066451896,0.0011209572,0.02881865,0.000015640013,0.000049433555,0.0038273954,0.00033135718,0.0010639555,0.95230454,0.00005212045,0.01233107,0.000018490335],"about_ca_topic_score_codex":0.00059047516,"about_ca_topic_score_gemma":0.0010963979,"teacher_disagreement_score":0.0028342055,"about_ca_system_score_codex":0.00018175867,"about_ca_system_score_gemma":0.00013880982,"threshold_uncertainty_score":0.00948137},"labels":[],"label_agreement":null},{"id":"W3021919932","doi":"10.1016/j.jid.2016.02.517","title":"480 Trim32 deficiency enhances Th2 immunity and predisposes to features of atopic dermatitis","year":2016,"lang":"en","type":"article","venue":"Journal of Investigative Dermatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Thymic stromal lymphopoietin; Immunology; Atopic dermatitis; Psoriasis; Innate immune system; Chemokine; CCL5; Inflammation; Medicine; Immune system; IL-2 receptor; T cell","score_opus":0.011581617072920795,"score_gpt":0.24256748801892816,"score_spread":0.23098587094600737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021919932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998553,0.00021787862,0.00020475299,0.000041434574,0.000011366475,0.000006578385,0.00007672594,0.000023301016,0.00086503907],"genre_scores_gemma":[0.99894613,0.00012904902,0.00015152217,0.000022141152,0.000015072165,0.00000667181,0.0000828898,0.000011218599,0.0006353242],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997664,0.00007507236,0.000020122803,0.00004092481,0.000046806916,0.00005056345],"domain_scores_gemma":[0.9997243,0.000060941504,0.000090828995,0.000035334368,0.000017836997,0.00007073613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019644189,0.00052320113,0.0003603287,0.00086057343,0.00039246058,0.0003976082,0.00024010956,0.0006795932,0.00620387],"category_scores_gemma":[0.00040558362,0.00030377632,0.00033115392,0.0003143936,0.0003110215,0.00023666481,0.00040879063,0.0005896307,0.0008291802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035729054,0.00052313134,0.07786723,0.00011401055,0.0000801263,0.01627389,0.0002564511,0.00021083387,0.89108706,0.00055967295,0.00061728316,0.00883739],"study_design_scores_gemma":[0.00017309666,0.0014194216,0.81417274,0.00008172952,0.00021013222,0.07364688,0.0008379381,0.0023212738,0.1024405,0.0009557487,0.0036930824,0.000047520167],"about_ca_topic_score_codex":0.00048113146,"about_ca_topic_score_gemma":0.0003819045,"teacher_disagreement_score":0.00620387,"about_ca_system_score_codex":0.00016385312,"about_ca_system_score_gemma":0.00012590938,"threshold_uncertainty_score":0.02075398},"labels":[],"label_agreement":null},{"id":"W3027219640","doi":"10.1074/jbc.rev120.009402","title":"Lipopolysaccharide O-antigens—bacterial glycans made to measure","year":2020,"lang":"en","type":"review","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":190,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipopolysaccharide; Bacterial outer membrane; Lipid A; Innate immune system; Biology; Pathogen; Immune system; Antigen; Bacteria; Microbiology; Glycan; Cell biology; Chemistry; Biochemistry; Immunology; Genetics; Gene; Escherichia coli","score_opus":0.05027793550216578,"score_gpt":0.2899279001910518,"score_spread":0.23964996468888602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3027219640","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025170343,0.99647766,0.00030046797,0.00021787954,0.000605669,0.000008724969,0.000033441407,0.00001710147,0.0020874639],"genre_scores_gemma":[0.0014685295,0.9955141,0.00035039248,0.00024753666,0.0002765828,0.000011136405,0.00009939562,0.0000035738751,0.0020287624],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998524,0.000019956311,0.000015125845,0.000024997642,0.00006787822,0.000019702044],"domain_scores_gemma":[0.9998317,0.0000503131,0.000030229592,0.0000074472664,0.000050578466,0.000029776085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039437125,0.00085080194,0.0008217965,0.0017078926,0.00020977405,0.00078705896,0.0006312308,0.00095903483,0.003350774],"category_scores_gemma":[0.00046556862,0.00023141883,0.0003118496,0.0013927089,0.00038823983,0.0010345471,0.0005741231,0.0015455208,0.0037361106],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009056642,0.00008556464,0.00022384406,0.010806445,0.000062921186,0.00020209768,0.000037033296,0.00024475495,0.008201334,0.0059273397,0.03469034,0.9394277],"study_design_scores_gemma":[0.0000067724727,0.000056418517,0.00038095293,0.0008625278,0.000026540552,0.00069068425,0.000020363443,0.000041794865,0.0016154785,0.00087793183,0.99541,0.000010429571],"about_ca_topic_score_codex":0.0004923259,"about_ca_topic_score_gemma":0.0006761666,"teacher_disagreement_score":0.003350774,"about_ca_system_score_codex":0.00044716007,"about_ca_system_score_gemma":0.0006574193,"threshold_uncertainty_score":0.011209428},"labels":[],"label_agreement":null},{"id":"W3029078140","doi":"10.1371/journal.ppat.1008553","title":"Irgm1-deficiency leads to myeloid dysfunction in colon lamina propria and susceptibility to the intestinal pathogen Citrobacter rodentium","year":2020,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"National Institutes of Health; Pew Charitable Trusts; National Institute of Allergy and Infectious Diseases; U.S. Department of Veterans Affairs","keywords":"Citrobacter rodentium; Lamina propria; Biology; Inflammation; Immunity; Pathogen; Immune system; Microbiology; Immunology; Intestinal mucosa; Intracellular parasite; Medicine; Epithelium","score_opus":0.017434102910891442,"score_gpt":0.21889491850282014,"score_spread":0.2014608155919287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029078140","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973943,0.0006484225,0.000858684,0.00009564643,0.000015537054,0.000026004342,0.00040597684,0.00008048999,0.00047486363],"genre_scores_gemma":[0.9967321,0.0002573992,0.0012354571,0.000059083253,0.0000056050476,0.000029854971,0.00033910753,0.000031717413,0.001309666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996716,0.000057704012,0.00004619818,0.00009162519,0.00005592246,0.000076991644],"domain_scores_gemma":[0.9993672,0.000059520444,0.00028111166,0.00004970417,0.00002395646,0.00021852592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019002301,0.0006727509,0.00030898253,0.0006858272,0.0002125616,0.0002992943,0.00038089266,0.00072628923,0.0016024802],"category_scores_gemma":[0.00027155483,0.00035973752,0.0002704668,0.00022487709,0.00045314187,0.00020152018,0.00040585574,0.00082231,0.00041557106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002975122,0.000052403055,0.000507811,0.000039062154,0.000006493735,0.00023681065,0.000024540566,0.000092695715,0.99796873,0.00007195003,0.000028756516,0.00067315163],"study_design_scores_gemma":[0.00014014628,0.0013096131,0.05902273,0.00006792846,0.00006034518,0.0061012628,0.00031543936,0.0027907628,0.92660564,0.0002423576,0.0033085393,0.000035185676],"about_ca_topic_score_codex":0.00064500346,"about_ca_topic_score_gemma":0.00091034785,"teacher_disagreement_score":0.0016024802,"about_ca_system_score_codex":0.00042859436,"about_ca_system_score_gemma":0.00020716009,"threshold_uncertainty_score":0.005360782},"labels":[],"label_agreement":null},{"id":"W3033435188","doi":"10.1101/2020.06.04.133686","title":"Influence of the microenvironment on the modulation of the host response by the typhoid toxin","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Kempestiftelserna; Vetenskapsrådet; Cancer Research Foundation in Northern Sweden; Cancerfonden","keywords":"Inflammatory bowel disease; DNA damage; Immune system; Microbiology; Typhoid fever; Biology; Inflammation; Toxin; Context (archaeology); Salmonella; Bacteria; Colitis; Ulcerative colitis; Immunology; In vivo; Crosstalk; Disease; DNA; Medicine; Genetics","score_opus":0.008422814811777977,"score_gpt":0.18888581270207644,"score_spread":0.18046299789029846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033435188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99422544,0.0026368767,0.001270257,0.00016767625,0.00004234901,0.0000068891777,0.00021539278,0.0000280608,0.001407111],"genre_scores_gemma":[0.99704903,0.00063904386,0.0007257875,0.000060686558,0.000016378272,0.000008007712,0.00015935894,0.000016049864,0.0013256568],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999194,0.000019578578,0.0000039520082,0.000017310658,0.000015523863,0.000024202476],"domain_scores_gemma":[0.9999275,0.000016931352,0.00001614044,0.000008647804,0.000006749371,0.000023981574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015943022,0.00016777491,0.000174702,0.00010180762,0.00010227946,0.00034214565,0.00007283328,0.00015794495,0.0018764221],"category_scores_gemma":[0.00009348131,0.00006325398,0.00010014648,0.000070865295,0.00020669367,0.00013236293,0.00025965364,0.00031290326,0.00044626664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014180562,0.000007340726,0.00032392802,0.00002300125,0.000002160167,0.000059276354,0.000010563077,0.000056556175,0.9986174,0.00009818739,0.000040914514,0.0006189259],"study_design_scores_gemma":[0.000021247506,0.00027354519,0.015467748,0.000013263207,0.000012049862,0.00031563023,0.00008370709,0.00097314414,0.9788481,0.00023609895,0.0037484644,0.000007053494],"about_ca_topic_score_codex":0.00015360312,"about_ca_topic_score_gemma":0.00015506633,"teacher_disagreement_score":0.0018764221,"about_ca_system_score_codex":0.00015657934,"about_ca_system_score_gemma":0.00011170175,"threshold_uncertainty_score":0.0062772036},"labels":[],"label_agreement":null},{"id":"W3034223907","doi":"10.1101/mcs.a005298","title":"Clinical IRAK4 deficiency caused by homozygosity for the novel <i>IRAK4</i> (c.1049delG, p.Gly350Glufs*15) variant","year":2020,"lang":"en","type":"article","venue":"Molecular Case Studies","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Genome British Columbia","keywords":"Innate immune system; Biology; Immune system; Immunology; Pattern recognition receptor; Streptococcus pneumoniae; Pathogen-associated molecular pattern; Signal transduction; Toll-like receptor; Microbiology; Cell biology","score_opus":0.04855890570139689,"score_gpt":0.31431567176666747,"score_spread":0.2657567660652706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034223907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.984786,0.0019796614,0.003362056,0.0015522026,0.0002735521,0.00019221738,0.0008504748,0.00027651837,0.0067274086],"genre_scores_gemma":[0.99647105,0.00063910574,0.0008199908,0.00022515732,0.00016113566,0.000017376464,0.00017960285,0.000036727506,0.0014499221],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995183,0.00005107337,0.0000446851,0.0001828945,0.00007298049,0.00013014473],"domain_scores_gemma":[0.99925464,0.00018114879,0.00020644127,0.000021780133,0.000048907164,0.00028699634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002463827,0.0030744795,0.0010687897,0.001047413,0.0015953773,0.00055746414,0.0008567652,0.0018931526,0.0030113396],"category_scores_gemma":[0.00091536687,0.00074680184,0.00066692254,0.0010546669,0.0017406,0.00058286363,0.00095137785,0.0015591721,0.00074344006],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018874597,0.000073147734,0.013614714,0.00008072468,0.000020457343,0.97020805,0.00027682097,0.00013298732,0.012943245,0.00025649823,0.0006304674,0.0015740985],"study_design_scores_gemma":[0.000033873876,0.00041493663,0.037755776,0.0000432689,0.000060223378,0.9552659,0.00023949279,0.00036812742,0.0032645916,0.00016941316,0.002351423,0.00003310522],"about_ca_topic_score_codex":0.0037646268,"about_ca_topic_score_gemma":0.002837671,"teacher_disagreement_score":0.0037646268,"about_ca_system_score_codex":0.0006064426,"about_ca_system_score_gemma":0.00076036586,"threshold_uncertainty_score":0.01007396},"labels":[],"label_agreement":null},{"id":"W3036110445","doi":"10.1101/2020.06.19.162057","title":"Toll-like receptor 4 is activated by platinum and contributes to cisplatin-induced ototoxicity","year":2020,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Li Ka Shing Institute of Virology, University of Alberta; University of Alberta; Stollery Children’s Hospital Foundation; Children's Hospital Foundation; Canadian Institutes of Health Research; Alberta Cancer Foundation; Women and Children's Health Research Institute; Children's Health Research Institute","keywords":"Ototoxicity; TLR4; Cisplatin; Toll-like receptor; Receptor; Cancer research; Pharmacology; Chemistry; Medicine; Innate immune system; Internal medicine; Biochemistry; Chemotherapy","score_opus":0.012625455692000789,"score_gpt":0.2181531584759222,"score_spread":0.2055277027839214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036110445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98446333,0.008205385,0.0041889013,0.0006272709,0.00018156902,0.00011258726,0.00037088484,0.000108070475,0.0017419965],"genre_scores_gemma":[0.99459004,0.0020334932,0.0009475055,0.0002218226,0.000040704806,0.00006161936,0.00027559706,0.000007860761,0.0018213995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978036,0.00004329492,0.00003371159,0.000030511032,0.000052635896,0.000059485228],"domain_scores_gemma":[0.99985075,0.000015320928,0.0000630581,0.000011174565,0.000023603257,0.00003604058],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018171709,0.00044386764,0.00042438146,0.00042354706,0.00020845255,0.00032531022,0.00022270008,0.0005315388,0.003019469],"category_scores_gemma":[0.00024625234,0.00019351092,0.0008127689,0.00015689975,0.0002612182,0.00025881405,0.00049255806,0.0007609842,0.000518889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013395743,0.00016669976,0.0049375664,0.0004162809,0.000059531605,0.0015055537,0.000040943774,0.00016554008,0.9849311,0.00015320722,0.0003842607,0.0058998354],"study_design_scores_gemma":[0.0002344309,0.0028273345,0.09346801,0.00010185375,0.00036362698,0.008419818,0.0004388541,0.004390835,0.87665975,0.00081629504,0.0122412555,0.000038049624],"about_ca_topic_score_codex":0.0001943986,"about_ca_topic_score_gemma":0.00018800201,"teacher_disagreement_score":0.003019469,"about_ca_system_score_codex":0.00026632065,"about_ca_system_score_gemma":0.0002035595,"threshold_uncertainty_score":0.010101199},"labels":[],"label_agreement":null},{"id":"W3036179624","doi":"10.1186/s13223-020-00450-0","title":"Serum BPI as a novel biomarker in asthma","year":2020,"lang":"en","type":"article","venue":"Allergy Asthma and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"Jinan University","keywords":"Medicine; Asthma; Immunoglobulin E; Internal medicine; Exhaled nitric oxide; Immunology; Biomarker; Body mass index; Allergy; Gastroenterology; Clinical significance; Antibody; Spirometry; Chemistry","score_opus":0.02951849065627416,"score_gpt":0.2970045224850446,"score_spread":0.26748603182877045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036179624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96283394,0.02842466,0.0045419913,0.00039426066,0.00022815076,0.0000932232,0.0008708853,0.00019456676,0.0024182356],"genre_scores_gemma":[0.9930387,0.0019825713,0.0038029957,0.00010396965,0.00018337833,0.00007025478,0.0004472112,0.0000069706157,0.00036399244],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99944836,0.00017011404,0.000050988918,0.000092077426,0.0001914839,0.000046998597],"domain_scores_gemma":[0.99910057,0.00025408028,0.00032868108,0.000030351235,0.00016005093,0.00012619591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096518465,0.0005886076,0.000652857,0.0014152271,0.00025099647,0.0008473392,0.00033551452,0.0006247813,0.00097194733],"category_scores_gemma":[0.0012978715,0.00016949268,0.00026343216,0.0010643961,0.00036681033,0.00037653628,0.00032148373,0.0006364732,0.00031723737],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015831832,0.00033219834,0.9209316,0.0004939657,0.0002499582,0.0004330341,0.00010631239,0.00046943725,0.03523688,0.00016569336,0.00080008013,0.03919778],"study_design_scores_gemma":[0.000057293677,0.0017079965,0.97239166,0.00009938546,0.00033119106,0.003337426,0.00020455972,0.0049170996,0.013253328,0.0004871112,0.0031829304,0.000030043297],"about_ca_topic_score_codex":0.00031084038,"about_ca_topic_score_gemma":0.00031245433,"teacher_disagreement_score":0.0014152271,"about_ca_system_score_codex":0.00030112924,"about_ca_system_score_gemma":0.00027318305,"threshold_uncertainty_score":0.0051044226},"labels":[],"label_agreement":null},{"id":"W3039872463","doi":"10.3389/fcell.2020.00563","title":"TILRR Promotes Migration of Immune Cells Through Induction of Soluble Inflammatory Mediators","year":2020,"lang":"en","type":"article","venue":"Frontiers in Cell and Developmental Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"International Centre for Infectious Diseases; University of Manitoba; Public Health Agency of Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Chemokine; Immune system; Inflammation; Innate immune system; Proinflammatory cytokine; Immunology; Cell biology; Biology; Cell culture; Cell; HeLa; Chemistry; Molecular biology","score_opus":0.008402831696434847,"score_gpt":0.19545716901643131,"score_spread":0.18705433731999646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3039872463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97936076,0.010238467,0.005712405,0.00046615818,0.0002451496,0.00006460283,0.00073495694,0.00031332546,0.0028641426],"genre_scores_gemma":[0.9885768,0.0033451472,0.0038888783,0.00022061734,0.000058261812,0.00007974731,0.00077458675,0.000027283048,0.0030287004],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997385,0.000031632044,0.000025519415,0.00005646308,0.000063220934,0.000084752144],"domain_scores_gemma":[0.9998971,0.000015334968,0.000033865566,0.000008918505,0.000018525114,0.000026319753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014636386,0.00040678246,0.00044607974,0.0002431473,0.00016522907,0.0003677988,0.00011582023,0.00030016244,0.002191743],"category_scores_gemma":[0.00015318814,0.000097384334,0.0005302884,0.0001632653,0.00016676595,0.0002957873,0.0002768631,0.0006339457,0.00051692716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009632826,0.000028578228,0.00010861228,0.00011063856,0.0000050277063,0.000032591546,0.000017624765,0.000032528977,0.9981084,0.000030712847,0.00008766473,0.0013411987],"study_design_scores_gemma":[0.000029816321,0.00077182223,0.0035091816,0.00001882909,0.000035174555,0.0001769679,0.0000914648,0.00065951125,0.98988765,0.000029023728,0.004781894,0.000008597817],"about_ca_topic_score_codex":0.00051799876,"about_ca_topic_score_gemma":0.00081809843,"teacher_disagreement_score":0.002191743,"about_ca_system_score_codex":0.00023863885,"about_ca_system_score_gemma":0.00021097297,"threshold_uncertainty_score":0.007332146},"labels":[],"label_agreement":null},{"id":"W3040787992","doi":"10.1164/ajrccm-conference.2020.201.1_meetingabstracts.a2586","title":"Physiologically Derived Transcriptional Signature of Endotoxin Tolerance Identifies Immune Suppression in Early Sepsis","year":2020,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Signature (topology); Sepsis; Immune system; Immunology; Computer science; Computational biology; Biology; Mathematics","score_opus":0.013052373317272822,"score_gpt":0.2216345002449613,"score_spread":0.2085821269276885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3040787992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9910748,0.0015713624,0.004613316,0.00016451527,0.000066095716,0.000038751863,0.0009777551,0.00006830753,0.0014251079],"genre_scores_gemma":[0.995165,0.0004948155,0.0016462838,0.00013750757,0.00005263922,0.000060703504,0.0013241186,0.000022109174,0.0010967592],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997464,0.000042618543,0.000016764077,0.00005364551,0.000052345524,0.00008820222],"domain_scores_gemma":[0.99974746,0.00004185969,0.000057916855,0.000022110655,0.000045030905,0.0000855714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002778545,0.00027377935,0.00047771633,0.00053604203,0.00020427267,0.00061843777,0.00014816714,0.00035312134,0.0017948638],"category_scores_gemma":[0.00036717084,0.00015589329,0.0002925564,0.0002567936,0.00038594235,0.00019571482,0.00040800148,0.00079631136,0.00047190298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005521399,0.000031725765,0.0031980025,0.000028505941,0.0000057961456,0.000101147,0.000047097466,0.00004884199,0.99410266,0.00015891879,0.000050982522,0.0016741941],"study_design_scores_gemma":[0.00006807265,0.0021167547,0.48214552,0.000071163755,0.00006863379,0.0019520785,0.0008830129,0.0017950321,0.5061526,0.001449737,0.0032583657,0.000039037826],"about_ca_topic_score_codex":0.00014037701,"about_ca_topic_score_gemma":0.00022183987,"teacher_disagreement_score":0.0017948638,"about_ca_system_score_codex":0.00019584715,"about_ca_system_score_gemma":0.000226279,"threshold_uncertainty_score":0.0060044527},"labels":[],"label_agreement":null},{"id":"W3043659712","doi":"10.1016/j.ceca.2020.102253","title":"PANX1 in inflammation heats up: New mechanistic insights with implications for injury and infection","year":2020,"lang":"en","type":"article","venue":"Cell Calcium","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of British Columbia; University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Downregulation and upregulation; Inflammation; Purinergic receptor; Cell biology; Mechanism (biology); Tumor necrosis factor alpha; Neuroscience; Biology; Immunology; Extracellular; Physics; Gene; Biochemistry","score_opus":0.025283786194189986,"score_gpt":0.25412488689408524,"score_spread":0.22884110069989527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3043659712","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10152347,0.83815885,0.0058624563,0.04257048,0.0024486927,0.000051725194,0.00011870132,0.00014386591,0.009121732],"genre_scores_gemma":[0.3635886,0.60992914,0.0044377134,0.006659215,0.0071355617,0.000082936735,0.000105553045,0.000024913144,0.008036281],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99984586,0.00003349332,0.000014769385,0.000026937543,0.00003857602,0.000040246756],"domain_scores_gemma":[0.99979573,0.000070375405,0.000041746418,0.0000136825565,0.000025741356,0.000052765525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069743965,0.0008482493,0.00072868273,0.0005165708,0.00039067052,0.0014433566,0.00057465414,0.0017551273,0.0017631793],"category_scores_gemma":[0.00032103198,0.00019536374,0.0003218708,0.00034832806,0.0015273315,0.0038178002,0.0008060933,0.0024172694,0.0003048684],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00427938,0.00067747926,0.0045781108,0.0058770087,0.00020909516,0.010307663,0.001932821,0.0019232341,0.4557628,0.076264806,0.022233833,0.41595373],"study_design_scores_gemma":[0.0007180748,0.0046087033,0.031688027,0.0019200009,0.00045085352,0.024862243,0.0041020648,0.0071014874,0.1716819,0.11718998,0.63544273,0.00023389662],"about_ca_topic_score_codex":0.00013748344,"about_ca_topic_score_gemma":0.00038288714,"teacher_disagreement_score":0.0017631793,"about_ca_system_score_codex":0.0006075247,"about_ca_system_score_gemma":0.00028309875,"threshold_uncertainty_score":0.0058983564},"labels":[],"label_agreement":null},{"id":"W3046301510","doi":"10.3168/jds.2020-18652","title":"Effects of lipopolysaccharide exposure in primary bovine ruminal epithelial cells","year":2020,"lang":"en","type":"article","venue":"Journal of Dairy Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; University of Saskatchewan; CRC Health Group","keywords":"Lipopolysaccharide; Proinflammatory cytokine; TLR4; Chemokine; TLR2; Propidium iodide; Flow cytometry; Molecular biology; Biology; Tumor necrosis factor alpha; Chemistry; Andrology; Immunology; Inflammation; Biochemistry; Medicine; Apoptosis","score_opus":0.006643912198271343,"score_gpt":0.2154220701116276,"score_spread":0.20877815791335624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046301510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9852266,0.009055645,0.0026743189,0.00021657717,0.0001826532,0.00007559542,0.0007491027,0.000041084368,0.0017784605],"genre_scores_gemma":[0.9890358,0.0038203339,0.0032800185,0.00029371332,0.00006593168,0.00014694373,0.0013035308,0.000012381711,0.0020413164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932396,0.00024356127,0.00007916453,0.0000985473,0.000118925964,0.0001358014],"domain_scores_gemma":[0.9997253,0.00008695699,0.000035492696,0.00004260944,0.00006438534,0.000045264343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005612238,0.00034237193,0.00064214,0.00021248906,0.00034299234,0.0006257223,0.00018191713,0.0004572754,0.0015750838],"category_scores_gemma":[0.00023539424,0.00017580423,0.0005543724,0.00025799364,0.00028379867,0.00023127369,0.0003099996,0.00072800013,0.0007154455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005327379,0.00005872262,0.0003553298,0.00013943223,0.000006980633,0.000108720604,0.00006332134,0.00004409372,0.9977983,0.000025627554,0.000035596964,0.00083101884],"study_design_scores_gemma":[0.00007155145,0.003841942,0.016925659,0.000044644803,0.00004914888,0.0004417605,0.00058671733,0.0006502323,0.97232616,0.000049565548,0.00499462,0.000018042312],"about_ca_topic_score_codex":0.0010950231,"about_ca_topic_score_gemma":0.0015151463,"teacher_disagreement_score":0.0015750838,"about_ca_system_score_codex":0.00032541197,"about_ca_system_score_gemma":0.00024244795,"threshold_uncertainty_score":0.00526917},"labels":[],"label_agreement":null},{"id":"W3046931952","doi":"10.1093/labmed/lmaa055","title":"Quantitative Assessment of the Effects of<i>IL-1ß</i>-511 C&amp;gt;T Variant on Breast Cancer Risk: An Updated Meta-Analysis of 3331 Cases and 3609 Controls","year":2020,"lang":"en","type":"review","venue":"Laboratory Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Meta-analysis; Breast cancer; Odds ratio; Medicine; Internal medicine; Web of science; Scopus; Oncology; Gynecology; MEDLINE; Cancer; Biology","score_opus":0.044849137234779166,"score_gpt":0.36718323196856234,"score_spread":0.32233409473378316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3046931952","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005875116,0.9924109,0.00055937015,0.00015866393,0.00011251697,0.00007359387,0.0005585114,0.00001636687,0.00023501755],"genre_scores_gemma":[0.23710963,0.7565482,0.0024533872,0.0007494389,0.00036420472,0.00041583765,0.0017692349,0.000042243104,0.00054785976],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9960377,0.0018300054,0.00092458364,0.0006298826,0.00042899323,0.00014871519],"domain_scores_gemma":[0.9923071,0.0057995296,0.0010543382,0.00028217933,0.00047444808,0.000082420076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008322761,0.0018560225,0.009644631,0.003630839,0.0003645018,0.00186503,0.0013489646,0.0013050695,0.0030965202],"category_scores_gemma":[0.012975882,0.0007855555,0.021055158,0.004888056,0.00036141515,0.0007815169,0.0007679976,0.0010816864,0.00030367178],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047787474,0.000052209078,0.020591727,0.2243451,0.7021823,0.00023926901,0.00007646169,0.0008434354,0.00091217377,0.00021411516,0.001279558,0.04448506],"study_design_scores_gemma":[0.0004833334,0.00027628697,0.013417923,0.00997432,0.9714111,0.00019746716,0.000033428638,0.00024619026,0.00023860145,0.00027963522,0.0034214575,0.00002031641],"about_ca_topic_score_codex":0.0030823995,"about_ca_topic_score_gemma":0.005538473,"teacher_disagreement_score":0.009644631,"about_ca_system_score_codex":0.00092334946,"about_ca_system_score_gemma":0.0014977996,"threshold_uncertainty_score":0.044015467},"labels":[],"label_agreement":null},{"id":"W3047817653","doi":"10.4049/jimmunol.2000440","title":"Identification of a Novel Antisepsis Pathway: Sectm1a Enhances Macrophage Phagocytosis of Bacteria through Activating GITR","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute","funders":"National Institute of General Medical Sciences; National Institutes of Health; American Heart Association","keywords":"Phagocytosis; Sepsis; Macrophage; Inflammation; PI3K/AKT/mTOR pathway; Immunology; Biology; Microbiology; Immune system; Signal transduction; Cell biology; In vitro","score_opus":0.023735962511085798,"score_gpt":0.25606178209084846,"score_spread":0.23232581957976267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047817653","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898573,0.0043209177,0.003866235,0.00041467117,0.000056651297,0.00006721947,0.0005099269,0.00010260622,0.000804549],"genre_scores_gemma":[0.98876303,0.0032562946,0.0049169827,0.00028447175,0.000037751295,0.00008065492,0.0012040532,0.000017621855,0.0014391361],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998989,0.000020327663,0.000012265411,0.000019644085,0.000023983794,0.000024821533],"domain_scores_gemma":[0.9999187,0.0000057550387,0.000030882526,0.000005404565,0.0000115228895,0.0000277327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020079786,0.00042655866,0.00035200745,0.00025844193,0.00013551522,0.00029766516,0.00026043213,0.00036926317,0.000835179],"category_scores_gemma":[0.00009385968,0.0001288489,0.00042753769,0.00013141244,0.00022959294,0.00020401806,0.000206282,0.00083110953,0.0002945755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023885256,0.00003725583,0.00030751573,0.00007476411,0.0000090488775,0.000058972622,0.000008352458,0.00005903339,0.99759054,0.00008283757,0.000057239282,0.0014757807],"study_design_scores_gemma":[0.0001245246,0.0015452598,0.00984174,0.000023073739,0.00008585919,0.00090403744,0.00004668675,0.001500407,0.97972876,0.00008052758,0.006108702,0.000010509684],"about_ca_topic_score_codex":0.00019264915,"about_ca_topic_score_gemma":0.00030249832,"teacher_disagreement_score":0.000835179,"about_ca_system_score_codex":0.00030970716,"about_ca_system_score_gemma":0.0002511104,"threshold_uncertainty_score":0.0027939677},"labels":[],"label_agreement":null},{"id":"W3065170598","doi":"10.1007/978-1-0716-0802-9_19","title":"Isolation and Preparation of Bone Marrow-Derived Immune Cells for Metabolic Analysis","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Immune system; Bone marrow; Isolation (microbiology); Biology; Immunology; Cell biology; Microbiology","score_opus":0.01608924888270522,"score_gpt":0.3318431209736655,"score_spread":0.31575387209096023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3065170598","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09765347,0.0672623,0.6561405,0.0014349222,0.0022015648,0.0044444255,0.050999805,0.003313036,0.11654994],"genre_scores_gemma":[0.1345246,0.045946363,0.6118583,0.0016173403,0.00046788694,0.004794035,0.07714064,0.0015898123,0.122061],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998073,0.000016224998,0.000013667821,0.000041352716,0.00008562306,0.000035808003],"domain_scores_gemma":[0.9999058,0.000026604495,0.000007394963,0.00001959628,0.00002430999,0.000016217004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003478157,0.00091336574,0.00065258855,0.0010235294,0.00042112704,0.00063517125,0.0009120387,0.0003937824,0.008511424],"category_scores_gemma":[0.00022469107,0.00043754186,0.0004918721,0.0011891843,0.00029784147,0.00047340302,0.00063362706,0.0018548311,0.010922287],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111080866,0.00005500863,0.000106083804,0.00022669724,0.000008872052,0.000119776596,0.000030664254,0.000182726,0.96748066,0.0011282143,0.0018634417,0.02868677],"study_design_scores_gemma":[0.00006798441,0.0002829997,0.003610931,0.00012023863,0.000057419642,0.0007063374,0.000066073844,0.0007244302,0.8128449,0.0029713504,0.17851578,0.00003144243],"about_ca_topic_score_codex":0.0007166519,"about_ca_topic_score_gemma":0.0021278237,"teacher_disagreement_score":0.008511424,"about_ca_system_score_codex":0.00024855905,"about_ca_system_score_gemma":0.0004418915,"threshold_uncertainty_score":0.028473556},"labels":[],"label_agreement":null},{"id":"W3080287521","doi":"10.1039/d0ay00872a","title":"Novel RP-HPLC based assay for selective and sensitive endotoxin quantification","year":2020,"lang":"en","type":"article","venue":"Analytical Methods","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eurostars; Innosuisse - Schweizerische Agentur für Innovationsförderung; Haute école Spécialisée de Suisse Occidentale; SCIEX","keywords":"Chromatography; Chemistry; High-performance liquid chromatography","score_opus":0.06419860312713199,"score_gpt":0.36829059355392796,"score_spread":0.30409199042679597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080287521","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07844946,0.022084767,0.8845405,0.00068228855,0.0012322502,0.0009078504,0.0012708702,0.004282991,0.0065490487],"genre_scores_gemma":[0.24439734,0.012217032,0.72488385,0.0016191413,0.0007782599,0.0017059383,0.0025594418,0.00027419592,0.011564816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99609727,0.00093957706,0.00020797324,0.0007315933,0.0018131247,0.00021062313],"domain_scores_gemma":[0.99905854,0.00026538345,0.00017523121,0.0000930637,0.00033002286,0.00007777113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014999798,0.0020170384,0.001044484,0.0015613441,0.0004133011,0.00088329375,0.0014490782,0.0020122689,0.0013528566],"category_scores_gemma":[0.001289146,0.00069220056,0.00061081466,0.00075067335,0.00065632124,0.00093165814,0.00094951695,0.0022670978,0.0034340366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006340217,0.0001395696,0.0003431263,0.0003775466,0.00003355147,0.00010965157,0.00002729818,0.00017974204,0.9792148,0.0003964511,0.0006548621,0.018460067],"study_design_scores_gemma":[0.000019370733,0.00046833747,0.0009784721,0.00004276815,0.00006557629,0.001321757,0.000028091592,0.003590161,0.9771643,0.00030176836,0.015958821,0.000060589948],"about_ca_topic_score_codex":0.00014041424,"about_ca_topic_score_gemma":0.00035221424,"teacher_disagreement_score":0.0020170384,"about_ca_system_score_codex":0.00045549104,"about_ca_system_score_gemma":0.0005845251,"threshold_uncertainty_score":0.007932723},"labels":[],"label_agreement":null},{"id":"W3085940154","doi":"10.3389/fcimb.2020.00487","title":"ABCF1 Regulates dsDNA-induced Immune Responses in Human Airway Epithelial Cells","year":2020,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Waterloo; McMaster University","funders":"Canadian Institutes of Health Research; British Columbia Lung Association","keywords":"Biology; Innate immune system; Respiratory epithelium; Cell biology; Gene knockdown; RIG-I; CXCL10; Epithelium; Immune system; Immunology; Chemokine; Cell culture; Genetics","score_opus":0.009586843432140894,"score_gpt":0.21440265834023567,"score_spread":0.20481581490809478,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3085940154","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98406607,0.007794932,0.0033551077,0.00058492797,0.00012681796,0.000082986946,0.0014589644,0.00016443392,0.002365783],"genre_scores_gemma":[0.9907424,0.0015535372,0.0020656965,0.0002230397,0.000027495184,0.000114957584,0.002446355,0.000024843665,0.0028016227],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997409,0.000035203277,0.000021850583,0.000054209595,0.00006536295,0.00008253326],"domain_scores_gemma":[0.99986386,0.000027479105,0.000023323371,0.000018163135,0.000047603597,0.000019500087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024660712,0.0001911497,0.00026326644,0.00029789456,0.0002718175,0.00043606496,0.0001586164,0.00049069343,0.0031075648],"category_scores_gemma":[0.00024592315,0.00012768172,0.00033177706,0.00023542454,0.00021084043,0.00017977893,0.00017859865,0.00043686523,0.0013395158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014728018,0.00004155354,0.0012082246,0.00010651532,0.000006669822,0.0001342002,0.000041470837,0.000041180538,0.99539953,0.000084988016,0.00037317796,0.0024152107],"study_design_scores_gemma":[0.000060850907,0.0003645745,0.04645613,0.000032956654,0.000039074712,0.0016721709,0.00024994,0.0018030612,0.92956096,0.00013057987,0.019617865,0.000011846148],"about_ca_topic_score_codex":0.00095911336,"about_ca_topic_score_gemma":0.00092698436,"teacher_disagreement_score":0.0031075648,"about_ca_system_score_codex":0.0004421818,"about_ca_system_score_gemma":0.00024863868,"threshold_uncertainty_score":0.0103958845},"labels":[],"label_agreement":null},{"id":"W3086103973","doi":"10.1111/imm.13260","title":"Implications of cellular metabolism for immune cell migration","year":2020,"lang":"en","type":"review","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Chemokine; Immune system; Biology; Chemokine receptor; Cell biology; Cell metabolism; Receptor; Cytoskeleton; Cell migration; Cell; Immunology; Biochemistry","score_opus":0.024062620719186318,"score_gpt":0.28156063076515564,"score_spread":0.25749801004596934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086103973","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008619202,0.9985511,0.00010522145,0.00023928122,0.00028102542,0.0000013709767,0.000011122002,0.0000045353318,0.0007201857],"genre_scores_gemma":[0.0007086477,0.9983454,0.00009404693,0.00012300882,0.0002201093,0.000002695817,0.000018974508,0.0000010486392,0.00048608083],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987185,0.000023951763,0.000017459079,0.00002628633,0.000040887422,0.000019567286],"domain_scores_gemma":[0.99984443,0.00006389643,0.000020832014,0.0000052303917,0.000046001584,0.000019595322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033305102,0.0006997405,0.0010703477,0.0014074093,0.00028658917,0.0011503691,0.00061075325,0.0010854995,0.0039335443],"category_scores_gemma":[0.00045737522,0.00018402078,0.0003934835,0.0014594432,0.0004243628,0.0012785882,0.0008299739,0.0015270312,0.0022353225],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108015156,0.000057550038,0.00021323317,0.0151101835,0.00007006648,0.00034470044,0.000085197215,0.0005685828,0.005442528,0.012253959,0.037686564,0.92805946],"study_design_scores_gemma":[0.000008693801,0.00007596552,0.00083088945,0.002470001,0.000052996587,0.0013808351,0.00007785708,0.00012675341,0.0007914332,0.0048244856,0.98934036,0.000019659257],"about_ca_topic_score_codex":0.0007454469,"about_ca_topic_score_gemma":0.0009490394,"teacher_disagreement_score":0.0039335443,"about_ca_system_score_codex":0.00071764394,"about_ca_system_score_gemma":0.00079089485,"threshold_uncertainty_score":0.013159037},"labels":[],"label_agreement":null},{"id":"W3086420271","doi":"10.1039/d0fo01711f","title":"A polysaccharide extracted from alfalfa activates splenic B cells by TLR4 and acts primarily <i>via</i> the MAPK/p38 pathway","year":2020,"lang":"en","type":"article","venue":"Food & Function","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lethbridge College; Agriculture and Agri-Food Canada","funders":"","keywords":"TLR4; p38 mitogen-activated protein kinases; Polysaccharide; MAPK/ERK pathway; Cell biology; Chemistry; Biology; Signal transduction; Biochemistry","score_opus":0.008648806070993177,"score_gpt":0.16870997448692937,"score_spread":0.1600611684159362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086420271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98673797,0.00357193,0.0059330454,0.00017786655,0.000047662626,0.00003011292,0.00027220315,0.00007451584,0.0031547255],"genre_scores_gemma":[0.99123245,0.0018941468,0.0031893651,0.00008367439,0.000028721905,0.00002980076,0.00040402642,0.000011031614,0.0031269002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999211,0.00001703334,0.0000056081144,0.000012700692,0.0000181767,0.000025427425],"domain_scores_gemma":[0.9999579,0.0000037036723,0.00001847215,0.000004012056,0.000007649935,0.00000831096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010333194,0.000652208,0.00015896071,0.00025831308,0.0001605498,0.00020108353,0.00011652233,0.00018823933,0.0016709922],"category_scores_gemma":[0.000067072026,0.000100134646,0.00044315742,0.00013608707,0.0001669752,0.00018553225,0.00015841221,0.0003047998,0.00046586807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019066142,0.000025903935,0.0002834195,0.000068480214,0.0000075184216,0.00008714052,0.000009428685,0.000027935497,0.9966113,0.00005504875,0.000034496392,0.0025987162],"study_design_scores_gemma":[0.000030512938,0.00077527156,0.009040233,0.000015840293,0.000037607762,0.0005116321,0.000062762956,0.00048334865,0.98481303,0.00013246368,0.004090651,0.00000663938],"about_ca_topic_score_codex":0.0004762584,"about_ca_topic_score_gemma":0.0003333668,"teacher_disagreement_score":0.0016709922,"about_ca_system_score_codex":0.00020476409,"about_ca_system_score_gemma":0.0001961819,"threshold_uncertainty_score":0.0055900216},"labels":[],"label_agreement":null},{"id":"W3088045753","doi":"10.1016/j.ejmech.2020.112863","title":"Amphiphilic desmuramyl peptides for the rational design of new vaccine adjuvants: Synthesis, in vitro modulation of inflammatory response and molecular docking studies","year":2020,"lang":"en","type":"article","venue":"European Journal of Medicinal Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Energy; NOSM University; Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Muramyl dipeptide; Chemistry; NOD2; Rational design; Docking (animal); Stereochemistry; Dipeptide; Biochemistry; In vitro; Receptor; Innate immune system; Amino acid; Biology","score_opus":0.033153266914804184,"score_gpt":0.2597577051853577,"score_spread":0.2266044382705535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088045753","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9749527,0.0038690246,0.019339638,0.00016840945,0.000041784402,0.0001615319,0.0002344864,0.00005560041,0.001176756],"genre_scores_gemma":[0.97558904,0.0036845156,0.018763348,0.000060169492,0.000012187123,0.00010216149,0.00031087553,0.00001653869,0.0014611743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999502,0.000013138498,0.000004271703,0.0000063949537,0.000012711131,0.000013295957],"domain_scores_gemma":[0.9999349,0.000015228618,0.000019322806,0.000005243942,0.0000110329365,0.000014171815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026938974,0.00034097306,0.00024626902,0.00010685057,0.000092678565,0.00019964117,0.00018531478,0.00020089668,0.0006839784],"category_scores_gemma":[0.0002310469,0.00011760051,0.00018427274,0.0001355341,0.00011270911,0.00030782435,0.00019484806,0.000606377,0.00025813558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040160326,0.00015584781,0.00018703111,0.0002333472,0.000014249713,0.000170063,0.00005292593,0.006541776,0.97846824,0.0011413668,0.00013879237,0.012494762],"study_design_scores_gemma":[0.00015560603,0.0018221942,0.0004781334,0.000033825916,0.000034648092,0.00026364072,0.0000394734,0.0092028165,0.9794541,0.00031400955,0.0081797,0.000021815276],"about_ca_topic_score_codex":0.00014770178,"about_ca_topic_score_gemma":0.00033869047,"teacher_disagreement_score":0.0006839784,"about_ca_system_score_codex":0.00016887579,"about_ca_system_score_gemma":0.0001991102,"threshold_uncertainty_score":0.0022881627},"labels":[],"label_agreement":null},{"id":"W3088291716","doi":"10.4103/1673-5374.293134","title":"Regulation of neuroimmune processes by damage- and resolution-associated molecular patterns","year":2020,"lang":"en","type":"review","venue":"Neural Regeneration Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Neuroinflammation; Neuroscience; Neuroimmunology; Immune system; Central nervous system; Biology; Nervous system; Peripheral nervous system; Inflammation; Damp; Immunology; Neuroregeneration; Medicine","score_opus":0.06968194088514428,"score_gpt":0.36167872329051626,"score_spread":0.29199678240537197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3088291716","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036301926,0.9460235,0.007527266,0.0010485355,0.0007129014,0.000048621372,0.00025476387,0.00007136888,0.008011124],"genre_scores_gemma":[0.10905441,0.88085014,0.0049351305,0.00059227186,0.00074470893,0.00007350405,0.0002836093,0.000014819021,0.0034513336],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997857,0.000040988405,0.000034288532,0.00004647147,0.000057599096,0.000034951547],"domain_scores_gemma":[0.99981314,0.00004058101,0.000067717025,0.000010108669,0.000048095688,0.000020384252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026846875,0.0002986037,0.00046453218,0.00063283043,0.0002019476,0.00082275085,0.0002891884,0.00038315478,0.0012619471],"category_scores_gemma":[0.00029195013,0.00010427119,0.00029246995,0.0006668466,0.0005003747,0.0008557473,0.0004555314,0.000566919,0.0005520444],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005771753,0.00011582616,0.0036306966,0.0205997,0.00020009284,0.0015832986,0.0006505737,0.0010785117,0.30310994,0.025290744,0.007834399,0.6353291],"study_design_scores_gemma":[0.000079260455,0.0008268216,0.036393713,0.0034566747,0.0003526312,0.007914724,0.0009356758,0.0011053944,0.13817678,0.017399544,0.79324675,0.00011202156],"about_ca_topic_score_codex":0.0002719899,"about_ca_topic_score_gemma":0.00036506169,"teacher_disagreement_score":0.0012619471,"about_ca_system_score_codex":0.0002813031,"about_ca_system_score_gemma":0.00052937906,"threshold_uncertainty_score":0.004221618},"labels":[],"label_agreement":null},{"id":"W3089208583","doi":"10.3390/biom10101382","title":"Comparative Characterization of Two cxcl8 Homologs in Oplegnathus fasciatus: Genomic, Transcriptional and Functional Analyses","year":2020,"lang":"en","type":"article","venue":"Biomolecules","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Memorial University of Newfoundland","funders":"Memorial University of Newfoundland; National Research Foundation of Korea; Ministry of Oceans and Fisheries; National Research Foundation","keywords":"Biology; Edwardsiella tarda; Flagellin; Chemokine; Streptococcus iniae; Chemotaxis; Gene; Interleukin 8; Homology (biology); Recombinant DNA; In silico; CXCL14; Molecular biology; Microbiology; Genetics; Inflammation; Immunology; CXCL10; Cytokine; Receptor","score_opus":0.061786059948043814,"score_gpt":0.2953126960010571,"score_spread":0.23352663605301327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3089208583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99836034,0.00023056893,0.00035141088,0.000029596024,0.0000033083932,0.000012701565,0.0006784234,0.000010820836,0.00032278517],"genre_scores_gemma":[0.9928308,0.00025850514,0.0015274687,0.000075818665,0.00000920083,0.000050375278,0.0038954886,0.000009301318,0.0013430115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999505,0.0000034946358,0.000004190089,0.000016422986,0.00001092317,0.000014467095],"domain_scores_gemma":[0.9998429,0.00002201673,0.00005941547,0.000009145121,0.00003121131,0.00003531427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005385499,0.00017651156,0.00016522448,0.00048253525,0.00014751276,0.0001228483,0.00009289986,0.0001954774,0.0005408724],"category_scores_gemma":[0.0001259585,0.00007105232,0.00018353555,0.00025774923,0.00016152777,0.000111089066,0.00017839867,0.0001794075,0.00024207537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011325346,0.000011031488,0.0037029223,0.00004265172,0.0000029556538,0.00009989256,0.00008343041,0.000033692286,0.993807,0.000017708,0.000018010993,0.0020674702],"study_design_scores_gemma":[0.000043064887,0.0008744129,0.8282583,0.000029254994,0.000065580876,0.0026105358,0.00085833436,0.0012799308,0.15655121,0.00012428778,0.009269508,0.000035536752],"about_ca_topic_score_codex":0.0013347868,"about_ca_topic_score_gemma":0.001808641,"teacher_disagreement_score":0.0013347868,"about_ca_system_score_codex":0.00016466112,"about_ca_system_score_gemma":0.00014745397,"threshold_uncertainty_score":0.002654016},"labels":[],"label_agreement":null},{"id":"W3090443648","doi":"10.3390/vaccines8040569","title":"Combination of Innate Immune Modulators as Vaccine Adjuvants in Mice","year":2020,"lang":"en","type":"article","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Energy; University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Adjuvant; Ovalbumin; Immune system; Muramyl dipeptide; TLR3; Immunology; Immunopotentiator; Antigen; TLR2; Splenocyte; Innate immune system; Biology; Toll-like receptor","score_opus":0.009014819788959644,"score_gpt":0.2282270420143937,"score_spread":0.21921222222543404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3090443648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839601,0.0033867005,0.009087713,0.00032732854,0.0002554913,0.00036576678,0.00057117554,0.00027111426,0.001774758],"genre_scores_gemma":[0.97177315,0.00326348,0.01720331,0.00030673217,0.00014168506,0.00075165805,0.00074852945,0.00006391655,0.0057476647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994789,0.00010388376,0.00005287244,0.00012027373,0.00013241309,0.00011165888],"domain_scores_gemma":[0.9997433,0.00003453096,0.00007947003,0.000046094985,0.000025792418,0.00007083144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046513212,0.0007762978,0.00082750927,0.00070030295,0.0001633779,0.00039735663,0.00049101835,0.00075942196,0.0008814965],"category_scores_gemma":[0.00016875844,0.00030539668,0.00049566635,0.00024114655,0.000385597,0.0004842378,0.0003052869,0.0015675006,0.00039617694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009941217,0.0006196275,0.00011496626,0.00011165933,0.000023457937,0.000038170332,0.000022769866,0.00033536297,0.99403507,0.00016535276,0.00006412942,0.0034753527],"study_design_scores_gemma":[0.00017620897,0.007969835,0.00052730116,0.000014364013,0.00006370385,0.00012685033,0.000015981846,0.0010809859,0.98718435,0.00010221873,0.002728612,0.000009639073],"about_ca_topic_score_codex":0.00021159665,"about_ca_topic_score_gemma":0.00032302696,"teacher_disagreement_score":0.0008814965,"about_ca_system_score_codex":0.00023186232,"about_ca_system_score_gemma":0.0003535053,"threshold_uncertainty_score":0.0029488802},"labels":[],"label_agreement":null},{"id":"W3092156103","doi":"10.1097/ta.0000000000002978","title":"Ethinyl estradiol sulfate acts without fluid resuscitation through estrogen receptors to rapidly protect the cardiovascular system from severe hemorrhage","year":2020,"lang":"en","type":"article","venue":"The Journal of Trauma: Injury, Infection, and Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Sept Iles","funders":"","keywords":"Estrogen receptor; Nitric oxide; Enos; Nitric oxide synthase; Estrogen; Pharmacology; Medicine; Chemistry; Internal medicine; Endocrinology","score_opus":0.018866347622982164,"score_gpt":0.25911488279865524,"score_spread":0.24024853517567307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092156103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992935,0.0023565013,0.00305319,0.00011698906,0.000061774495,0.00005949413,0.00018163581,0.0000894027,0.001145954],"genre_scores_gemma":[0.9916956,0.0019715326,0.0029814371,0.000088358625,0.00005005578,0.000053377124,0.00042622015,0.000016039485,0.0027173685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989736,0.000020444902,0.000013263974,0.00001581132,0.000028067194,0.000025115545],"domain_scores_gemma":[0.99987626,0.000018736586,0.00004138626,0.00001978827,0.000015777547,0.00002812877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025688933,0.00036039465,0.00029443033,0.00022809592,0.0000887082,0.00016116932,0.00021156539,0.00018762631,0.0012341306],"category_scores_gemma":[0.00016813556,0.00010744973,0.00024764927,0.00010951966,0.00028877793,0.00019721378,0.0001018928,0.0004560687,0.00020581049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001014028,0.0001781866,0.00034597103,0.000051165618,0.000011580375,0.00006490103,0.000013510686,0.00008640718,0.99369603,0.00007095991,0.00006128402,0.0044059656],"study_design_scores_gemma":[0.00010408908,0.0070489235,0.0029581708,0.000011173259,0.0000224097,0.00018940248,0.000019192725,0.00032085675,0.98756194,0.000039570317,0.0017209976,0.0000033737313],"about_ca_topic_score_codex":0.00013732989,"about_ca_topic_score_gemma":0.00037082878,"teacher_disagreement_score":0.0012341306,"about_ca_system_score_codex":0.00009314771,"about_ca_system_score_gemma":0.00019124996,"threshold_uncertainty_score":0.004128635},"labels":[],"label_agreement":null},{"id":"W3093092111","doi":"10.3390/vaccines8040605","title":"Probiotic Lactobacilli Limit Avian Influenza Virus Subtype H9N2 Replication in Chicken Cecal Tonsil Mononuclear Cells","year":2020,"lang":"en","type":"article","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Immune system; Microbiology; Biology; Probiotic; CpG Oligodeoxynucleotide; Virus; Interferon; Peripheral blood mononuclear cell; Virology; Cytokine; Immunology; Bacteria; Gene; Gene expression","score_opus":0.025442812649548965,"score_gpt":0.243634318799729,"score_spread":0.21819150615018001,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093092111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9977449,0.0012756909,0.00023978265,0.000059030815,0.00002775884,0.000019455236,0.00006264178,0.000005717042,0.0005651218],"genre_scores_gemma":[0.99677247,0.0007648191,0.0008239822,0.00010376047,0.000017742064,0.000038187183,0.00016272147,0.000005248662,0.0013111217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989986,0.000022559567,0.0000122235015,0.00001874407,0.00001945537,0.000027141637],"domain_scores_gemma":[0.9999219,0.000016579346,0.000013620408,0.0000053604267,0.000013075154,0.000029481616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011677149,0.0001989914,0.00023930529,0.00008348864,0.000107027896,0.00026413533,0.00010613972,0.0001922185,0.000821681],"category_scores_gemma":[0.00015208406,0.0000954789,0.0001792601,0.00004093001,0.00013811376,0.0001311763,0.0002218386,0.0003572561,0.00016023505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004153755,0.00004800712,0.00054509577,0.00006131059,0.0000032397809,0.000031425225,0.00003123451,0.000025047493,0.99735355,0.000011811575,0.00002854518,0.0014453501],"study_design_scores_gemma":[0.00008102487,0.0054584583,0.036432512,0.000057273333,0.0000566428,0.000219981,0.000567674,0.0010490754,0.9524375,0.000055307668,0.0035715704,0.000012886347],"about_ca_topic_score_codex":0.0009246498,"about_ca_topic_score_gemma":0.002148668,"teacher_disagreement_score":0.0009246498,"about_ca_system_score_codex":0.00013107392,"about_ca_system_score_gemma":0.00021422634,"threshold_uncertainty_score":0.0027487874},"labels":[],"label_agreement":null},{"id":"W3095422540","doi":"10.1152/ajplung.00392.2019","title":"Depletion of pulmonary intravascular macrophages rescues inflammation-induced delayed neutrophil apoptosis in horses","year":2020,"lang":"en","type":"article","venue":"American Journal of Physiology-Lung Cellular and Molecular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Ex vivo; Apoptosis; Propidium iodide; Downregulation and upregulation; Inflammation; Caspase 3; Medicine; Annexin; Tumor necrosis factor alpha; Immunology; In vivo; Chemistry; Flow cytometry; Biology; Programmed cell death; Biochemistry","score_opus":0.0050836759148010155,"score_gpt":0.21047967348124325,"score_spread":0.20539599756644222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3095422540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99526805,0.0019902727,0.0019306738,0.00014327634,0.000043856715,0.000100207755,0.00009878014,0.000046629873,0.00037822087],"genre_scores_gemma":[0.9936434,0.0014675575,0.002619673,0.00015946434,0.000035125908,0.00020680469,0.000252793,0.000015821046,0.0015993466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997377,0.00006866333,0.000022561091,0.00004882127,0.000046384626,0.00007593107],"domain_scores_gemma":[0.9997811,0.000020326119,0.00009231835,0.000027167958,0.000028430235,0.000050638748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031184842,0.00049958954,0.0006000761,0.00031302948,0.00019318073,0.00035346235,0.00032169928,0.00047369808,0.0009542615],"category_scores_gemma":[0.000345879,0.00018014802,0.0003420473,0.00006772651,0.00038877205,0.00032905984,0.00030494801,0.0008090826,0.00032588912],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026554037,0.00028988157,0.00082866504,0.00021793526,0.000020608943,0.00015114111,0.000071894014,0.00011392053,0.9885062,0.000072794355,0.00012391846,0.006947624],"study_design_scores_gemma":[0.0005071427,0.022029327,0.021214277,0.0001229225,0.00015966613,0.0010798577,0.00041766439,0.0016398829,0.9453018,0.00023397154,0.00726492,0.000028558774],"about_ca_topic_score_codex":0.00031877053,"about_ca_topic_score_gemma":0.0008210748,"teacher_disagreement_score":0.0009542615,"about_ca_system_score_codex":0.00019425833,"about_ca_system_score_gemma":0.00028017195,"threshold_uncertainty_score":0.0031923652},"labels":[],"label_agreement":null},{"id":"W3097168712","doi":"10.1073/pnas.2001948117","title":"Phosphatidylinositol-4-kinase IIα licenses phagosomes for TLR4 signaling and MHC-II presentation in dendritic cells","year":2020,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Eye Institute; National Heart, Lung, and Blood Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Cell biology; Phagosome; Acquired immune system; Antigen presentation; Biology; TLR4; Proinflammatory cytokine; Phosphatidylinositol; Pattern recognition receptor; Dendritic cell; Immune system; Signal transduction; Innate immune system; Phagocytosis; Immunology; Inflammation; T cell","score_opus":0.03503162019793635,"score_gpt":0.29158076442383546,"score_spread":0.25654914422589914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097168712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843651,0.003632954,0.007780959,0.00020886956,0.000084101055,0.00005273088,0.0009605599,0.00020927649,0.0027053494],"genre_scores_gemma":[0.9921934,0.0013470715,0.0023869297,0.000056463636,0.000012887096,0.000049709324,0.00094631914,0.000029877707,0.0029774273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974805,0.000029605268,0.000027449183,0.00004546066,0.000074001495,0.00007548659],"domain_scores_gemma":[0.99989724,0.000005104965,0.000035038414,0.000019226514,0.000012180798,0.000031171418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013178877,0.0003530298,0.0002204989,0.0002753781,0.00029644932,0.00048480125,0.00018557985,0.00033979918,0.0008000451],"category_scores_gemma":[0.00014942976,0.00023911965,0.00033368223,0.00021067384,0.00024886755,0.0002600607,0.0004509709,0.00061705924,0.000823341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010301513,0.000009972403,0.0001810574,0.0000306887,0.0000027061938,0.00003897252,0.00000788818,0.000048624726,0.99879813,0.00015492969,0.000034366145,0.00058961514],"study_design_scores_gemma":[0.00002970944,0.000065620494,0.0074734986,0.000008882004,0.000013333926,0.0003378975,0.000039391358,0.0013559253,0.9857722,0.00022180483,0.004675275,0.0000065777035],"about_ca_topic_score_codex":0.00059669605,"about_ca_topic_score_gemma":0.0004903063,"teacher_disagreement_score":0.0008000451,"about_ca_system_score_codex":0.00069545576,"about_ca_system_score_gemma":0.00040521263,"threshold_uncertainty_score":0.005045891},"labels":[],"label_agreement":null},{"id":"W3098985585","doi":"10.1136/jitc-2020-sitc2020.0824","title":"824 Modulation of TLR3 protein in response to radiation in squamous cell lung carcinoma","year":2020,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"TLR3; Cancer research; Lung cancer; Downregulation and upregulation; Radiation therapy; Medicine; Immunotherapy; Cancer; Innate immune system; Toll-like receptor; Abscopal effect; Cell; Immune system; Immunology; Biology; Oncology; Internal medicine; Gene","score_opus":0.008230781192209371,"score_gpt":0.2173612196367519,"score_spread":0.20913043844454252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3098985585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99567646,0.0020715194,0.0005305659,0.00014836156,0.000068927315,0.000035297213,0.00037422258,0.000027114667,0.0010675204],"genre_scores_gemma":[0.9952366,0.0012025198,0.00074143335,0.0001796152,0.000024967645,0.00007456976,0.0007144913,0.0000071228255,0.0018188138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999069,0.000018749994,0.000009061096,0.000011648177,0.000022838236,0.000030799045],"domain_scores_gemma":[0.99995697,0.000008315265,0.000010517999,0.0000035362973,0.0000087653325,0.000011927289],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011383707,0.00014901343,0.0001835632,0.0001722707,0.00011964979,0.00013180787,0.00011363014,0.00026293407,0.002475425],"category_scores_gemma":[0.00008243111,0.00008169333,0.0003634222,0.00016195097,0.00013356295,0.000099599725,0.00008690875,0.0003843615,0.0006091717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004918565,0.00007778857,0.0004581884,0.000074493866,0.0000056939534,0.00006689359,0.000010651085,0.000040026967,0.9976553,0.000020496895,0.00010403158,0.0009945047],"study_design_scores_gemma":[0.00009518252,0.0022661255,0.030626656,0.00001485032,0.000039801525,0.0005614609,0.00012186458,0.0009244742,0.962029,0.00006333989,0.0032473272,0.0000098554865],"about_ca_topic_score_codex":0.0005144106,"about_ca_topic_score_gemma":0.0005731775,"teacher_disagreement_score":0.002475425,"about_ca_system_score_codex":0.00018136432,"about_ca_system_score_gemma":0.00014941153,"threshold_uncertainty_score":0.008281052},"labels":[],"label_agreement":null},{"id":"W3106263790","doi":"10.1038/s42003-020-01397-z","title":"HACS1 signaling adaptor protein recognizes a motif in the paired immunoglobulin receptor B cytoplasmic domain","year":2020,"lang":"en","type":"article","venue":"Communications Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Waterloo; York University","funders":"Canadian Institutes of Health Research","keywords":"SH3 domain; Signal transducing adaptor protein; SH2 domain; Immunoglobulin domain; WW domain; Sequence motif; Binding domain; Binding site; Chemistry; Signal transduction; Plasma protein binding; Cell biology; Biology; Receptor; Biochemistry; Receptor tyrosine kinase","score_opus":0.047351476069237404,"score_gpt":0.26161514889127735,"score_spread":0.21426367282203995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106263790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99074066,0.0011127068,0.0049931738,0.00016695523,0.000030449552,0.000016793114,0.0002062741,0.00009574969,0.002637144],"genre_scores_gemma":[0.99435765,0.00035843035,0.002219122,0.00007121461,0.000011328428,0.0000119089555,0.00041735987,0.000007682183,0.0025451665],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992275,0.000012400823,0.000002611853,0.000017160972,0.000025747204,0.000019287094],"domain_scores_gemma":[0.9999571,0.0000055372075,0.000010180367,0.0000032236765,0.00000368069,0.000020271733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000077402095,0.00026619577,0.00011915157,0.00012927743,0.0002518513,0.00019957969,0.00015692743,0.00030045133,0.0020328842],"category_scores_gemma":[0.000071590366,0.00008619129,0.0002024058,0.00010400893,0.00024964396,0.00012427323,0.00026035367,0.00045600068,0.0009469985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007346932,0.000011796743,0.0005011532,0.00002002675,0.0000045087077,0.00012716533,0.000009532708,0.000072063274,0.997101,0.00031112827,0.000105702624,0.0016623832],"study_design_scores_gemma":[0.000022063206,0.00024799223,0.013453965,0.000008762722,0.000015074567,0.0014713869,0.000071905284,0.0023110337,0.9720514,0.0003073832,0.010030763,0.000008319387],"about_ca_topic_score_codex":0.00031651024,"about_ca_topic_score_gemma":0.0004839893,"teacher_disagreement_score":0.0020328842,"about_ca_system_score_codex":0.0002882201,"about_ca_system_score_gemma":0.00021052746,"threshold_uncertainty_score":0.0068006516},"labels":[],"label_agreement":null},{"id":"W3111010928","doi":"10.1099/jgv.0.001541","title":"Differential TLR7-mediated cytokine expression by R848 in M-CSF- versus GM-CSF-derived macrophages after LCMV infection","year":2020,"lang":"en","type":"article","venue":"Journal of General Virology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Cytokine; Granulocyte macrophage colony-stimulating factor; Lymphocytic choriomeningitis; TLR7; Immunology; Macrophage colony-stimulating factor; Proinflammatory cytokine; Macrophage; Inflammation; Immune system; Innate immune system; In vitro; Toll-like receptor","score_opus":0.009135743696410136,"score_gpt":0.22731406474153665,"score_spread":0.21817832104512652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3111010928","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979359,0.00058660714,0.0005664614,0.000025788817,0.00001184072,0.000021528978,0.0003031191,0.000015845735,0.00053280516],"genre_scores_gemma":[0.9957355,0.00047972158,0.0016492594,0.00005935949,0.000015384636,0.00008467855,0.0007038735,0.000011853366,0.0012602282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997522,0.00004942047,0.000033040145,0.00003681651,0.00004204746,0.000086472246],"domain_scores_gemma":[0.99985707,0.00003351977,0.00003709624,0.000016376287,0.00002348577,0.000032450756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021032641,0.0002889192,0.00030446638,0.00022984788,0.00013580214,0.00031966314,0.00012001888,0.00038095418,0.0010100752],"category_scores_gemma":[0.00017292124,0.000121967736,0.00025641095,0.00017154423,0.00026110915,0.00023074486,0.00022698665,0.00054409966,0.00047906107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030052257,0.000017986304,0.00025695915,0.000032942473,0.000001803769,0.000044401077,0.000025184267,0.000014593978,0.9989207,0.000020516101,0.0000075565413,0.0003568103],"study_design_scores_gemma":[0.000034233162,0.00075573334,0.01748715,0.00001950597,0.000020269077,0.0002711993,0.00012774764,0.0005158768,0.9798221,0.00005929452,0.0008803386,0.000006541562],"about_ca_topic_score_codex":0.00022782618,"about_ca_topic_score_gemma":0.00024357864,"teacher_disagreement_score":0.0010100752,"about_ca_system_score_codex":0.00017924848,"about_ca_system_score_gemma":0.00013667683,"threshold_uncertainty_score":0.0033791065},"labels":[],"label_agreement":null},{"id":"W3112129610","doi":"10.1097/md.0000000000023659","title":"Association of interleukin-6 gene polymorphisms with the risk of hepatocellular carcinoma","year":2020,"lang":"en","type":"review","venue":"Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Odds ratio; Hepatocellular carcinoma; Internal medicine; Meta-analysis; Confidence interval; Gastroenterology; Allele; Oncology; Gene; Genetics; Biology","score_opus":0.015304152121791688,"score_gpt":0.2375842294321924,"score_spread":0.22228007731040073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112129610","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09157429,0.90444267,0.0017947124,0.0007402567,0.00031509643,0.00010395367,0.00055279233,0.00002512502,0.00045108417],"genre_scores_gemma":[0.70192665,0.29162014,0.0035079012,0.00065144483,0.0009009155,0.0002965435,0.0007332331,0.000019859373,0.000343305],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9969512,0.0015519102,0.00056396355,0.0004024598,0.00038490267,0.00014555827],"domain_scores_gemma":[0.9940012,0.003882502,0.0013664797,0.00021274913,0.00042828478,0.00010882921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0053911833,0.0012355461,0.003669553,0.0023723205,0.0003155798,0.0014112969,0.0007889862,0.001051098,0.0013593037],"category_scores_gemma":[0.010326749,0.0004711254,0.008675998,0.0029572644,0.00036464966,0.00060542737,0.00051267043,0.0010613176,0.00015133574],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.015857084,0.0002520461,0.428031,0.08889653,0.38924396,0.0009249361,0.00020117417,0.0045367843,0.003954085,0.0004826212,0.0013211549,0.066298634],"study_design_scores_gemma":[0.002376622,0.0024474512,0.26572138,0.013096958,0.69953215,0.0027941656,0.00019204128,0.003253489,0.0024445914,0.0016195622,0.006424757,0.000096724056],"about_ca_topic_score_codex":0.00139025,"about_ca_topic_score_gemma":0.0018408893,"teacher_disagreement_score":0.0053911833,"about_ca_system_score_codex":0.00060535205,"about_ca_system_score_gemma":0.0009004471,"threshold_uncertainty_score":0.028511643},"labels":[],"label_agreement":null},{"id":"W3117279292","doi":"10.1097/shk.0000000000001704","title":"Toll-Like Receptors, Associated Biochemical Signaling Networks, and S100 Ligands","year":2020,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Pattern recognition receptor; Signal transducing adaptor protein; Receptor; Signal transduction; Cell biology; Pathogen-associated molecular pattern; Biology; Toll-like receptor; Transcription factor; Intracellular; Function (biology); Immune system; Immunology; Gene; Genetics","score_opus":0.01005349217356883,"score_gpt":0.20613546034873423,"score_spread":0.1960819681751654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3117279292","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012672714,0.97658145,0.0020671948,0.0018239224,0.0005375084,0.000016722335,0.00007367995,0.00003813865,0.0061885985],"genre_scores_gemma":[0.061389413,0.92303187,0.0019613057,0.00089414726,0.0012931342,0.00003568065,0.00021481524,0.000007866544,0.011171758],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9999105,0.00002309453,0.000008482984,0.00001541244,0.000027824291,0.0000147392275],"domain_scores_gemma":[0.9999342,0.000021587999,0.000018445111,0.0000016037967,0.0000123307855,0.000011881254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019173966,0.00048120436,0.00033972954,0.0006372678,0.00017262586,0.0008226858,0.0002268099,0.00056235795,0.0014875415],"category_scores_gemma":[0.00013161973,0.00010394398,0.00017380778,0.00058640644,0.0003693973,0.00068656716,0.0003209047,0.0006382643,0.00054316386],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00097297627,0.00019290492,0.0024167576,0.012178543,0.00016274539,0.002808105,0.00038293545,0.003034586,0.2638577,0.06476585,0.022951309,0.62627554],"study_design_scores_gemma":[0.000042459564,0.0006087292,0.011284918,0.0015484057,0.00012746637,0.005907826,0.0004972908,0.0019094018,0.0459473,0.034621503,0.8974362,0.00006850826],"about_ca_topic_score_codex":0.00031297485,"about_ca_topic_score_gemma":0.00043528815,"teacher_disagreement_score":0.0014875415,"about_ca_system_score_codex":0.00054198084,"about_ca_system_score_gemma":0.00033385787,"threshold_uncertainty_score":0.004976332},"labels":[],"label_agreement":null},{"id":"W3117330240","doi":"10.2139/ssrn.3600557","title":"The Type of Bacterial Lipopolysaccharides Dictates Insulin Resistance, GLP-1 and Insulin Secretion During Metabolic Endotoxemia","year":2020,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Insulin resistance; Secretion; Endocrinology; Insulin; Internal medicine; Islet; Biology; Type 2 diabetes; Medicine; Diabetes mellitus","score_opus":0.006868281090986463,"score_gpt":0.21462534837179464,"score_spread":0.20775706728080817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3117330240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990251,0.0003173396,0.00025930285,0.00006798959,0.0000299192,0.0000055264045,0.000073239826,0.0000042258534,0.00021748515],"genre_scores_gemma":[0.9986505,0.00022912936,0.0003149589,0.0000795955,0.000024243605,0.000016396225,0.00013457533,0.000006258552,0.00054433924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998325,0.00004563426,0.000020179696,0.000027355956,0.000026628995,0.00004773043],"domain_scores_gemma":[0.99977344,0.000043194526,0.00007061371,0.000018496063,0.00001471259,0.000079673155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038727946,0.00033709916,0.00043296794,0.00018939895,0.00012306227,0.00050949294,0.00012747588,0.00040180763,0.0012268142],"category_scores_gemma":[0.00042652772,0.00024597754,0.00033462455,0.00013804437,0.0004742725,0.0003964646,0.00025210643,0.00096446765,0.00022417706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.020252831,0.00011370233,0.0053979997,0.000044641823,0.00002362565,0.00020838462,0.00004301293,0.00013649718,0.9718079,0.00009884717,0.000048850135,0.0018237372],"study_design_scores_gemma":[0.00047783513,0.006994858,0.38837066,0.000053818472,0.0001571435,0.0010488275,0.00060965505,0.002629401,0.59791213,0.00088512385,0.0008062558,0.00005425982],"about_ca_topic_score_codex":0.00015391466,"about_ca_topic_score_gemma":0.00021191344,"teacher_disagreement_score":0.0012268142,"about_ca_system_score_codex":0.00028008944,"about_ca_system_score_gemma":0.00019548243,"threshold_uncertainty_score":0.004104078},"labels":[],"label_agreement":null},{"id":"W3119054513","doi":"10.1016/j.cytogfr.2021.01.001","title":"Granulocyte macrophage colony-stimulating factor has come of age: From a vaccine adjuvant to antiviral immunotherapy","year":2021,"lang":"en","type":"review","venue":"Cytokine & Growth Factor Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Immunotherapy; Immunology; Granulocyte macrophage colony-stimulating factor; Immune system; stat; Cytokine; Adjuvant; Biology; JAK-STAT signaling pathway; Signal transduction; Macrophage; Cancer immunotherapy; Innate immune system; Inflammation; Cancer research; Medicine; Cell biology; STAT3; Tyrosine kinase","score_opus":0.05944380855105983,"score_gpt":0.32786348470681853,"score_spread":0.2684196761557587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119054513","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005084201,0.99808866,0.000049697755,0.00048589025,0.001010819,0.0000020252648,0.00001003936,0.0000037618677,0.0002983336],"genre_scores_gemma":[0.0005693204,0.9963942,0.000116590294,0.0008071723,0.001444933,0.0000056391773,0.000026024858,0.0000022174186,0.0006339993],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997162,0.000045543915,0.000031934716,0.000043013286,0.0001228509,0.000040395415],"domain_scores_gemma":[0.9994491,0.00025727827,0.00006214674,0.000014661757,0.00013736646,0.0000794493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012020287,0.0010697341,0.0018655732,0.0013006842,0.00024224783,0.0017457271,0.00084999163,0.0017867924,0.0036223533],"category_scores_gemma":[0.0012095188,0.00029578333,0.00046006136,0.0015413946,0.0008777781,0.0021150573,0.0009308645,0.0034662653,0.0025033727],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038021654,0.00008462179,0.00014013996,0.009635597,0.00007684868,0.00017109826,0.00004586936,0.00027557943,0.003233231,0.0050500855,0.1051867,0.87572],"study_design_scores_gemma":[0.000069411275,0.00015947892,0.00038673374,0.0017802541,0.00007508678,0.00038723162,0.00003613804,0.00005935974,0.0004219664,0.001809909,0.99479914,0.000015245671],"about_ca_topic_score_codex":0.00083685707,"about_ca_topic_score_gemma":0.001673033,"teacher_disagreement_score":0.0036223533,"about_ca_system_score_codex":0.00074973324,"about_ca_system_score_gemma":0.0014982768,"threshold_uncertainty_score":0.012117982},"labels":[],"label_agreement":null},{"id":"W3119721218","doi":"10.1007/s10875-020-00933-0","title":"IFN-α2a Therapy in Two Patients with Inborn Errors of TLR3 and IRF3 Infected with SARS-CoV-2","year":2021,"lang":"en","type":"letter","venue":"Journal of Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Mercatus Center, George Mason University; Hospital for Sick Children; Fondation pour la Recherche Médicale; Institut National de la Santé et de la Recherche Médicale; St. Giles Foundation; George Mason University; Fisher Center for Alzheimer's Research Foundation; National Institutes of Health; Yale University; National Center for Advancing Translational Sciences; National Human Genome Research Institute; Agence Nationale de la Recherche; Georgia Clinical and Translational Science Alliance; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute","keywords":"Medicine; Virology; Medical microbiology; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; IRF3; Fulminant; Immunology; Pathology; Outbreak; Infectious disease (medical specialty); Disease","score_opus":0.034855802653941614,"score_gpt":0.33788409625752824,"score_spread":0.30302829360358663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119721218","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8494074,0.0034367922,0.0022646098,0.11469487,0.0077784103,0.00017601319,0.00029768256,0.00013576105,0.021808498],"genre_scores_gemma":[0.95203793,0.0013533618,0.0013992026,0.03340143,0.005263514,0.000057097674,0.00011997869,0.00004884563,0.006318639],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9993777,0.00012721379,0.00009451869,0.00010788168,0.00007175163,0.00022099033],"domain_scores_gemma":[0.99786985,0.0009468481,0.0002300527,0.00010440086,0.00013573316,0.0007131076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058402587,0.0012500653,0.000975331,0.0005506331,0.0017804904,0.0011563177,0.0008437146,0.008298863,0.0018037468],"category_scores_gemma":[0.005041602,0.0004911111,0.001271439,0.00033483037,0.000978241,0.00083486194,0.0005748725,0.0045332992,0.00047082733],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046177406,0.00016996745,0.009460799,0.00003606953,0.0000355697,0.9802491,0.00025958422,0.00012209102,0.0012639476,0.00049093657,0.003830283,0.0036198513],"study_design_scores_gemma":[0.00036201483,0.0010253326,0.016471343,0.0000954891,0.000101133206,0.9699073,0.0005715929,0.0013189056,0.0016740363,0.0011375697,0.00729333,0.000041915013],"about_ca_topic_score_codex":0.0024371014,"about_ca_topic_score_gemma":0.002300374,"teacher_disagreement_score":0.008298863,"about_ca_system_score_codex":0.0015717855,"about_ca_system_score_gemma":0.0007731278,"threshold_uncertainty_score":0.011404157},"labels":[],"label_agreement":null},{"id":"W3119728301","doi":"10.1101/2021.01.09.426034","title":"Double stranded RNA drives innate immune responses, sickness behavior and cognitive impairment dependent on dsRNA length, IFNAR1 expression and age","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"National Institutes of Health; Wellcome Trust","keywords":"Innate immune system; Immunology; Immune system; Inflammation; IRF7; RNA silencing; Biology; Disease; Cognitive decline; Neuroscience; RNA; Medicine; RNA interference; Gene; Dementia; Internal medicine; Genetics","score_opus":0.0127099205529357,"score_gpt":0.23497839042416696,"score_spread":0.22226846987123125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119728301","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997239,0.0007923575,0.0011226546,0.000043753713,0.000012995664,0.000021780752,0.00023641375,0.000065678156,0.00046541818],"genre_scores_gemma":[0.99430496,0.00086962123,0.0017866637,0.0000647793,0.00001559446,0.000061772465,0.00038124414,0.000018756662,0.002496474],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999268,0.000008771708,0.000008556092,0.000024931906,0.000014284511,0.000016566593],"domain_scores_gemma":[0.9998221,0.000014076766,0.0000955151,0.00001321985,0.000011452967,0.00004376045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000107626314,0.00045002188,0.00017584514,0.00018086661,0.00007037886,0.00017865947,0.000107833104,0.00020172435,0.0008464221],"category_scores_gemma":[0.000073506475,0.00012303363,0.00016572388,0.0000691736,0.00024043623,0.00018081091,0.00009491327,0.00047585883,0.00020758361],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007808675,0.000021178024,0.00009493052,0.000014795095,0.000001744959,0.000014456007,0.000004945217,0.00001696193,0.99937373,0.000017160826,0.000007892433,0.00035412374],"study_design_scores_gemma":[0.000024697785,0.0018837996,0.009434888,0.000009753636,0.000021386468,0.00028366817,0.000020223637,0.0004291672,0.98710454,0.00004977024,0.0007341093,0.0000039765396],"about_ca_topic_score_codex":0.00019717374,"about_ca_topic_score_gemma":0.00038699567,"teacher_disagreement_score":0.0008464221,"about_ca_system_score_codex":0.00019479716,"about_ca_system_score_gemma":0.00011737096,"threshold_uncertainty_score":0.0028315187},"labels":[],"label_agreement":null},{"id":"W3120761852","doi":"10.1038/s41598-020-79145-w","title":"Ultra-purification of Lipopolysaccharides reveals species-specific signalling bias of TLR4: importance in macrophage function","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Cumming School of Medicine, University of Calgary; Crohn's and Colitis Canada; Canada Foundation for Innovation","keywords":"TLR4; Macrophage; Function (biology); Biology; Cell biology; Microbiology; Computational biology; Signal transduction; Biochemistry; In vitro","score_opus":0.026378113374927684,"score_gpt":0.23600712260359874,"score_spread":0.20962900922867106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120761852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99106467,0.0011039482,0.006343696,0.00023202813,0.00003641947,0.000027375116,0.00033806334,0.0000346044,0.00081923534],"genre_scores_gemma":[0.9830446,0.0009696597,0.0112813655,0.00019546127,0.000025653613,0.00005145381,0.0020760514,0.00003650174,0.0023190966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987733,0.000029844083,0.000011359147,0.000017197775,0.000024680907,0.000039603554],"domain_scores_gemma":[0.9998982,0.00002567064,0.000019747078,0.0000140922775,0.000022133654,0.00002012323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020732627,0.00030558335,0.00014573369,0.00022728032,0.00013509385,0.00018665631,0.0001555448,0.0001980769,0.00096802664],"category_scores_gemma":[0.00029743367,0.00011060949,0.0002009394,0.0001564844,0.00017728204,0.00017209815,0.00034797785,0.0005059967,0.00048299055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007083739,0.000007670178,0.00023868732,0.000015092395,0.0000028069228,0.000020302105,0.000007312474,0.000013020313,0.99904186,0.000037495374,0.00001809991,0.0005266287],"study_design_scores_gemma":[0.000013004869,0.00015759675,0.008238133,0.000012420509,0.000018717796,0.00040675618,0.000056446093,0.000601387,0.9880144,0.0001835264,0.002291207,0.0000064515584],"about_ca_topic_score_codex":0.00026703003,"about_ca_topic_score_gemma":0.00032348922,"teacher_disagreement_score":0.00096802664,"about_ca_system_score_codex":0.00015777018,"about_ca_system_score_gemma":0.00017846774,"threshold_uncertainty_score":0.0032384396},"labels":[],"label_agreement":null},{"id":"W3120857783","doi":"10.14740/jocmr4409","title":"Correlation of Immunoglobulins and Lymphocytes Levels With the Clinical and Microbiological Response of Septic Patients With Gram-Negative Bacteremia","year":2021,"lang":"en","type":"article","venue":"Journal of Clinical Medicine Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Bacteremia; Sepsis; Medicine; Septic shock; Immunology; Antibiotics; Immune system; Antibody; Pathogen; Systemic inflammatory response syndrome; Microbiology; Biology","score_opus":0.09308121055823773,"score_gpt":0.4222641221159397,"score_spread":0.32918291155770196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120857783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996141,0.00010553417,0.00003587518,0.0000120766845,0.000003768882,0.0000037871998,0.000054378757,0.0000013283018,0.00016913564],"genre_scores_gemma":[0.9998153,0.00002467274,0.00002812445,0.000009194575,0.0000065577697,0.0000052167748,0.00007071094,5.253913e-7,0.00003975541],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99962986,0.00010510413,0.00006094934,0.0000675714,0.000058898167,0.000077664954],"domain_scores_gemma":[0.99812645,0.0005467262,0.0006415527,0.00008873498,0.00021204175,0.00038446332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043234535,0.0003108309,0.00030286078,0.00048356573,0.00024377681,0.00043935722,0.00017193085,0.0004198992,0.0016781498],"category_scores_gemma":[0.0028477884,0.00013479107,0.00021165841,0.00037556977,0.00023795677,0.00027265822,0.0002542092,0.0005497217,0.00026880737],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045730107,0.00005024467,0.9971091,0.000008928957,0.000024513487,0.00023957317,0.000053766966,0.00003790837,0.001080392,0.000005889513,0.000036056867,0.0008963627],"study_design_scores_gemma":[0.0000152316925,0.0006777937,0.99741745,0.000006077348,0.000024743033,0.0011022198,0.00016644331,0.00012162304,0.00032343913,0.000018299486,0.00012304637,0.0000036793936],"about_ca_topic_score_codex":0.00027882255,"about_ca_topic_score_gemma":0.0002346684,"teacher_disagreement_score":0.0016781498,"about_ca_system_score_codex":0.00013752303,"about_ca_system_score_gemma":0.00013561813,"threshold_uncertainty_score":0.005613923},"labels":[],"label_agreement":null},{"id":"W3123698822","doi":"10.4049/jimmunol.1901288","title":"Identification and Characterization of Zebrafish Tlr4 Coreceptor Md-2","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of General Medical Sciences; NIH Office of the Director; National Institutes of Health; American Heart Association","keywords":"Zebrafish; Biology; Innate immune system; Danio; Amniote; Gene; TLR4; Genetics; Cell biology; Immune system; Vertebrate","score_opus":0.007423134554255508,"score_gpt":0.2159507187473485,"score_spread":0.208527584193093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123698822","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9800607,0.0021374822,0.012083605,0.00028887478,0.000044567896,0.00014785254,0.0027291465,0.00011303882,0.0023948401],"genre_scores_gemma":[0.9494787,0.0012737856,0.02857782,0.00028780746,0.000034498364,0.00021485121,0.0111153545,0.0000681072,0.008949011],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991286,0.00000676839,0.000009828546,0.00001953738,0.000029447576,0.000021653954],"domain_scores_gemma":[0.9998734,0.000016979007,0.000028985687,0.000012620532,0.000036401783,0.000031611522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012491645,0.0003395466,0.00022442835,0.0006566788,0.00019467017,0.00020612883,0.0003147568,0.00032785893,0.0014874176],"category_scores_gemma":[0.00027148935,0.00022162568,0.00034929602,0.0001753539,0.00017101753,0.00015713481,0.00030444577,0.00045020483,0.0011786749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017360642,0.000002979963,0.0002667556,0.000013037237,0.0000013004498,0.000044409688,0.000005614373,0.000026409813,0.9990381,0.000032384807,0.000021093905,0.0005305757],"study_design_scores_gemma":[0.000037921236,0.00032991642,0.026100544,0.000019848805,0.00004557815,0.00091453997,0.00010236293,0.0023371968,0.9572684,0.00014858606,0.012674085,0.000021100086],"about_ca_topic_score_codex":0.0018627333,"about_ca_topic_score_gemma":0.0022445077,"teacher_disagreement_score":0.0018627333,"about_ca_system_score_codex":0.0005065514,"about_ca_system_score_gemma":0.00038325528,"threshold_uncertainty_score":0.0049758554},"labels":[],"label_agreement":null},{"id":"W3127703279","doi":"10.3390/ijms22031491","title":"N-palmitoyl-D-glucosamine, A Natural Monosaccharide-Based Glycolipid, Inhibits TLR4 and Prevents LPS-Induced Inflammation and Neuropathic Pain in Mice","year":2021,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"TLR4; Chemistry; Glucosamine; Inflammation; Pharmacology; Receptor; Lipid A; In vivo; Lipopolysaccharide; Biochemistry; Immunology; Medicine; Biology","score_opus":0.008922397735793649,"score_gpt":0.24827878228395503,"score_spread":0.23935638454816138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3127703279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912108,0.0025602558,0.0031787828,0.00020261154,0.00006852885,0.000046022305,0.0005279212,0.00015776108,0.002047282],"genre_scores_gemma":[0.9916112,0.0019922208,0.0028187672,0.000111933856,0.000012882986,0.000059821043,0.0005605077,0.000022986038,0.0028096596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999093,0.000014796263,0.00000842201,0.000012318911,0.000026603573,0.000028584724],"domain_scores_gemma":[0.99993265,0.0000037850084,0.000024094717,0.000005577234,0.000007557116,0.00002634309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008945547,0.00042251777,0.00025813928,0.00030573492,0.00009991402,0.00015028269,0.00023475612,0.00026106162,0.0009453267],"category_scores_gemma":[0.000080846046,0.00013353686,0.00029848388,0.00014465727,0.00023462926,0.00020489591,0.00015762988,0.0007646479,0.00019865566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008857351,0.0001947537,0.000144638,0.000100276244,0.000015925885,0.000035744877,0.000009769338,0.00018106047,0.9950976,0.00012313045,0.00008519673,0.0031261048],"study_design_scores_gemma":[0.000102055295,0.0026609935,0.0028343736,0.000019845414,0.000032972628,0.000112665606,0.000030447649,0.0013846329,0.99012333,0.00011417264,0.0025756613,0.000008898107],"about_ca_topic_score_codex":0.0011315633,"about_ca_topic_score_gemma":0.0015374874,"teacher_disagreement_score":0.0011315633,"about_ca_system_score_codex":0.00022050185,"about_ca_system_score_gemma":0.0003505096,"threshold_uncertainty_score":0.0031624436},"labels":[],"label_agreement":null},{"id":"W3128165650","doi":"10.3390/pharmaceutics13020205","title":"The Synergistic Effects of Sulfated Lactosyl Archaeol Archaeosomes When Combined with Different Adjuvants in a Murine Model","year":2021,"lang":"en","type":"article","venue":"Pharmaceutics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Adjuvant; Ovalbumin; Immune system; Antigen; Chemistry; Immunopotentiator; TLR3; TLR9; Immunology; Pharmacology; Biology; Biochemistry; Toll-like receptor; Innate immune system; Gene expression","score_opus":0.015233883794495407,"score_gpt":0.2631054672386502,"score_spread":0.24787158344415477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3128165650","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99547535,0.0016149753,0.0014141939,0.000119959564,0.00013443663,0.0001135881,0.00015267657,0.000047771435,0.00092693366],"genre_scores_gemma":[0.993328,0.0016913576,0.0027949975,0.00009720307,0.00007806093,0.00012055416,0.00019081998,0.000013454259,0.0016856556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996227,0.00013230475,0.00002741375,0.000047422895,0.00006785201,0.00010233385],"domain_scores_gemma":[0.99970955,0.000060885417,0.000067649526,0.00003148552,0.000029266288,0.00010104349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044637767,0.0007847516,0.0006309998,0.0005458541,0.00014320402,0.00032474007,0.0002525797,0.0005322151,0.00060806633],"category_scores_gemma":[0.00022370434,0.00020704832,0.00044671612,0.00020583051,0.00039936363,0.00034483214,0.00030738415,0.0012288352,0.00018566658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048164544,0.0012812911,0.00030074976,0.0002367048,0.000035265395,0.0000837076,0.000047669913,0.00044426296,0.9861211,0.00010806051,0.0000813388,0.0064433026],"study_design_scores_gemma":[0.00022778488,0.027558057,0.0018373247,0.000028900198,0.00014099662,0.0001415104,0.000051057996,0.00087672245,0.96702015,0.000069450325,0.002034437,0.000013676845],"about_ca_topic_score_codex":0.00024069818,"about_ca_topic_score_gemma":0.0005700687,"teacher_disagreement_score":0.0007847516,"about_ca_system_score_codex":0.0001447689,"about_ca_system_score_gemma":0.0004359523,"threshold_uncertainty_score":0.0023607016},"labels":[],"label_agreement":null},{"id":"W3131333668","doi":"10.3389/fimmu.2021.630427","title":"The Aryl Hydrocarbon Receptor Attenuates Acute Cigarette Smoke-Induced Airway Neutrophilia Independent of the Dioxin Response Element","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McGill University; McGill University Health Centre","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canada Foundation for Innovation","keywords":"Aryl hydrocarbon receptor; Neutrophilia; Inflammation; Immunology; Medicine; COPD; Pharmacology; Chemistry; Internal medicine; Transcription factor; Biochemistry","score_opus":0.007122393017670045,"score_gpt":0.21753460011296216,"score_spread":0.21041220709529213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131333668","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923832,0.0025217386,0.0020632977,0.00032034394,0.00013258848,0.00012215323,0.00031799043,0.00019004093,0.0019486485],"genre_scores_gemma":[0.9891481,0.0021289808,0.0018314095,0.00021560352,0.00004523754,0.00012566308,0.0005812547,0.00002981323,0.005893896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975306,0.000050738214,0.00001988465,0.00002441258,0.00006551145,0.00008639063],"domain_scores_gemma":[0.99984896,0.000017550192,0.00003729412,0.000015157372,0.000024778172,0.00005618874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024659536,0.0004668394,0.0005339785,0.00023374638,0.00014751346,0.00025770674,0.00034162222,0.0004060258,0.0013929072],"category_scores_gemma":[0.00014145195,0.0001780379,0.00038969744,0.00011490335,0.00027871996,0.0002170859,0.00020393833,0.0014850717,0.00034698274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010555572,0.00069658575,0.00015559465,0.0000858665,0.000017695946,0.00003679337,0.000016915665,0.00010457414,0.9941881,0.0001191111,0.00011399159,0.0034093682],"study_design_scores_gemma":[0.000367778,0.009667827,0.0075258184,0.0000207213,0.00006751822,0.00016968478,0.0000583134,0.0020036986,0.9771435,0.00009981943,0.0028649275,0.000010426847],"about_ca_topic_score_codex":0.0008602672,"about_ca_topic_score_gemma":0.0021059145,"teacher_disagreement_score":0.0013929072,"about_ca_system_score_codex":0.00015134008,"about_ca_system_score_gemma":0.00056122884,"threshold_uncertainty_score":0.0046597123},"labels":[],"label_agreement":null},{"id":"W3138812076","doi":"10.1073/pnas.2012529118","title":"Immunoediting role for major vault protein in apoptotic signaling induced by bacterial <i>N</i> -acyl homoserine lactones","year":2021,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"FP7 Ideas: European Research Council; Azrieli Foundation; United States-Israel Binational Science Foundation","keywords":"Cell biology; Signal transduction; Homoserine; Biology; Apoptosis; Tumor necrosis factor alpha; Cell signaling; Chemistry; Quorum sensing; Biochemistry; Immunology","score_opus":0.02097945863706688,"score_gpt":0.2695508775688064,"score_spread":0.24857141893173954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3138812076","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940925,0.0024961645,0.001360009,0.00018924526,0.000049533763,0.000012994218,0.000100088444,0.000064081956,0.0016353519],"genre_scores_gemma":[0.9964336,0.0005770988,0.00086742785,0.000049339265,0.0000113029355,0.000010269646,0.00014525728,0.000008403636,0.0018973707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999051,0.000022143604,0.0000065071845,0.000011832626,0.000018358041,0.0000359729],"domain_scores_gemma":[0.9998727,0.000020812071,0.000024696214,0.000012031671,0.000019851326,0.000049820635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001326815,0.00030213862,0.00014339038,0.00017072214,0.00016749151,0.00032805934,0.00010524827,0.0002882168,0.001772842],"category_scores_gemma":[0.00012611305,0.00007682617,0.00018381681,0.00007301799,0.00022869892,0.00023207598,0.00018902605,0.00045807922,0.0005281095],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003494994,0.00002516674,0.0001703774,0.000045994464,0.0000037136274,0.00011521542,0.000014521868,0.00003316872,0.99739,0.0001889521,0.00003782568,0.0016257177],"study_design_scores_gemma":[0.000022312095,0.0003715423,0.0051495386,0.000009033955,0.000008952102,0.00032819042,0.000044825574,0.0005653877,0.991952,0.00010418214,0.0014405628,0.0000033947613],"about_ca_topic_score_codex":0.00019685682,"about_ca_topic_score_gemma":0.00021921829,"teacher_disagreement_score":0.001772842,"about_ca_system_score_codex":0.0003137971,"about_ca_system_score_gemma":0.00017748264,"threshold_uncertainty_score":0.0059307814},"labels":[],"label_agreement":null},{"id":"W3139003502","doi":"10.15252/embr.202051280","title":"Toll-like receptor 4 is activated by platinum and contributes to cisplatin-induced ototoxicity","year":2021,"lang":"en","type":"article","venue":"EMBO Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":50,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Women and Children's Health Research Institute; Canada Research Chairs; Government of Canada; Canadian Institutes of Health Research; Kids With Cancer Society; Alberta Cancer Foundation; International Society for Advancement of Cytometry","keywords":"Ototoxicity; Cisplatin; TLR4; Toll-like receptor; In vivo; Cancer research; Lipopolysaccharide; Pharmacology; Chemistry; Receptor; Immunology; Medicine; Biology; Innate immune system; Internal medicine; Biochemistry; Chemotherapy","score_opus":0.00845607913448342,"score_gpt":0.23521105681290455,"score_spread":0.22675497767842112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139003502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.987358,0.006162694,0.0029265622,0.00078782823,0.00017900151,0.000084168874,0.00022164466,0.00009607154,0.0021841219],"genre_scores_gemma":[0.9965391,0.0014541695,0.00043094825,0.00010455417,0.00003989664,0.000029180823,0.00012143496,0.000008089154,0.0012725856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995189,0.00011294706,0.000058888705,0.0000507756,0.0001395628,0.000119002485],"domain_scores_gemma":[0.999666,0.00003073978,0.00016422833,0.000035596895,0.00004423304,0.000059225185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034059846,0.0004894751,0.0005158377,0.0005522902,0.0002840894,0.0006381004,0.00031864323,0.000596739,0.0026215806],"category_scores_gemma":[0.00055113115,0.00028447263,0.00074453145,0.00019770725,0.00040055322,0.00041589703,0.0008373141,0.00079404423,0.0005126768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026141626,0.00021271323,0.009147356,0.0003325675,0.00011328411,0.002186501,0.00007497956,0.00042272185,0.9741426,0.0004548072,0.00061439123,0.009683807],"study_design_scores_gemma":[0.00032654117,0.002799153,0.20614232,0.00013467114,0.00058722054,0.009398911,0.00087988377,0.0064515057,0.7574964,0.0020448011,0.013673341,0.000065271866],"about_ca_topic_score_codex":0.0003058139,"about_ca_topic_score_gemma":0.00040162992,"teacher_disagreement_score":0.0026215806,"about_ca_system_score_codex":0.0004548788,"about_ca_system_score_gemma":0.00040522113,"threshold_uncertainty_score":0.008770108},"labels":[],"label_agreement":null},{"id":"W3139656459","doi":"10.1016/j.celrep.2021.108931","title":"Influence of the microenvironment on modulation of the host response by typhoid toxin","year":2021,"lang":"en","type":"article","venue":"Cell Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"Kempestiftelserna; Umeå Universitet; Vetenskapsrådet; Cancer Research Foundation in Northern Sweden; Cancerfonden","keywords":"DNA damage; Immune system; Inflammatory bowel disease; Biology; Inflammation; Colitis; Microbiology; Crosstalk; Context (archaeology); In vivo; Proinflammatory cytokine; Immunology; Salmonella; Bacteria; DNA; Disease; Genetics; Medicine","score_opus":0.0038450959279699454,"score_gpt":0.18696865368567317,"score_spread":0.18312355775770323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139656459","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99751484,0.0014121952,0.00031166995,0.000048874466,0.000016168415,0.00000552984,0.000060360893,0.000010111829,0.0006203028],"genre_scores_gemma":[0.99863064,0.00058039464,0.0002677642,0.000040969568,0.000009764404,0.000008444854,0.00005646364,0.0000054728334,0.0004001501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985325,0.00005030157,0.000007461389,0.00002053643,0.000013976956,0.000054425385],"domain_scores_gemma":[0.9998685,0.000030159292,0.000029869021,0.00001266705,0.000010206653,0.000048496586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013992276,0.00015675889,0.0002184538,0.000091269954,0.00009568954,0.0003497035,0.00007462885,0.00017240545,0.0010402347],"category_scores_gemma":[0.00012497685,0.00007649639,0.000088173,0.000054890057,0.00022232012,0.00015944314,0.00022197739,0.000324959,0.00021292164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064801174,0.000031739968,0.000398696,0.000025422987,0.0000026960274,0.00008358628,0.00002068446,0.0000343636,0.9979291,0.000055166132,0.000019346951,0.0007511973],"study_design_scores_gemma":[0.00006092579,0.002304085,0.03935776,0.000023779105,0.000034726225,0.00045647306,0.00026431942,0.0007627492,0.9539924,0.00014100329,0.002590092,0.000011692229],"about_ca_topic_score_codex":0.0001057431,"about_ca_topic_score_gemma":0.00022246219,"teacher_disagreement_score":0.0010402347,"about_ca_system_score_codex":0.000117810174,"about_ca_system_score_gemma":0.00012487263,"threshold_uncertainty_score":0.003479898},"labels":[],"label_agreement":null},{"id":"W3143753348","doi":"10.1111/ajt.16584","title":"Toll-like receptor 3 is an endogenous sensor of cell death and a potential target for induction of long-term cardiac transplant survival","year":2021,"lang":"en","type":"article","venue":"American Journal of Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"Canadian Institutes of Health Research","keywords":"Necroptosis; Medicine; Programmed cell death; Inflammation; Transplantation; Apoptosis; TLR3; Mitochondrial permeability transition pore; Cancer research; Immunology; Cell biology; Toll-like receptor; Biology; Internal medicine; Immune system; Innate immune system","score_opus":0.01536268681641093,"score_gpt":0.23458651882012121,"score_spread":0.2192238320037103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3143753348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98452765,0.007932386,0.0047601783,0.00047845594,0.00021320053,0.000044317258,0.00021761129,0.000105786276,0.0017203572],"genre_scores_gemma":[0.996292,0.0012231411,0.0010918801,0.00012045558,0.000042841068,0.000022589009,0.00017968091,0.000006984001,0.0010204266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998934,0.000024399831,0.000008331502,0.00001257067,0.000019556683,0.000041741656],"domain_scores_gemma":[0.99990225,0.0000121832745,0.00003276344,0.000008466726,0.000013170585,0.00003115434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023972229,0.00024080055,0.00022134527,0.00013183302,0.00016116162,0.0003167333,0.00017906382,0.00021050498,0.0015274879],"category_scores_gemma":[0.00013071594,0.000058796064,0.00027299195,0.00008422238,0.00016258736,0.00020046864,0.0002761271,0.0008323463,0.00023619279],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012429325,0.00018292021,0.0017313295,0.00011506637,0.000017192591,0.00017773878,0.000029041605,0.00015470588,0.9828568,0.00049108814,0.00027125742,0.012729874],"study_design_scores_gemma":[0.0001694076,0.0042751655,0.04089873,0.000049802326,0.00011911007,0.0013319199,0.00024872756,0.0017386534,0.94267887,0.0007003222,0.007765771,0.000023392466],"about_ca_topic_score_codex":0.00007836858,"about_ca_topic_score_gemma":0.00017575765,"teacher_disagreement_score":0.0015274879,"about_ca_system_score_codex":0.00023390379,"about_ca_system_score_gemma":0.00016950173,"threshold_uncertainty_score":0.005109966},"labels":[],"label_agreement":null},{"id":"W3144640256","doi":"10.6000/1927-520x.2013.02.01.2","title":"Bacterial DNA Induced TNF-alpha Expression in Buffaloes (Murrah) in Comparison to that of Cross Breed Cattle","year":2013,"lang":"en","type":"article","venue":"Journal of Buffalo Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Breed; Biology; Immune system; Peripheral blood mononuclear cell; Incubation period; Real-time polymerase chain reaction; Veterinary medicine; Animal science; Gene expression; Andrology; Incubation; Immunology; Gene; Genetics; In vitro; Biochemistry; Medicine","score_opus":0.027282240699729284,"score_gpt":0.30346565064534353,"score_spread":0.27618340994561424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3144640256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99863523,0.00070027745,0.00015916026,0.00003121592,0.000014592662,0.000006897774,0.00013848131,0.0000036372362,0.00031046855],"genre_scores_gemma":[0.9967039,0.00074586686,0.0004000402,0.00007438679,0.000032665805,0.00003452363,0.00035465503,0.0000053263357,0.0016485624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997677,0.000039621278,0.000019753503,0.00007681422,0.000042274845,0.000053800977],"domain_scores_gemma":[0.9996501,0.00006909517,0.000119721415,0.00002072701,0.000052861633,0.00008738731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023177633,0.00020139167,0.0003941634,0.00038541347,0.0002841051,0.00039957635,0.000062775296,0.00025133698,0.0030478914],"category_scores_gemma":[0.00054075796,0.00018964236,0.00018073508,0.0001703345,0.00030156766,0.00025254043,0.00023390041,0.00046088544,0.00029406033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00089361897,0.00012059958,0.039383866,0.00015152694,0.00002578385,0.00035533676,0.0003767481,0.000017293281,0.95587283,0.000043257965,0.00005852329,0.0027006944],"study_design_scores_gemma":[0.000059104736,0.003796813,0.85814697,0.000044991793,0.00010940041,0.0029535731,0.0023446672,0.00022183363,0.12930404,0.00013730157,0.0028640188,0.00001724326],"about_ca_topic_score_codex":0.00056596304,"about_ca_topic_score_gemma":0.0010511376,"teacher_disagreement_score":0.0030478914,"about_ca_system_score_codex":0.00014446882,"about_ca_system_score_gemma":0.00014364273,"threshold_uncertainty_score":0.010196209},"labels":[],"label_agreement":null},{"id":"W3151332003","doi":"","title":"Progress of the Study on Endotoxin Tolerance Mechanisms","year":2006,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CAE (Canada)","funders":"","keywords":"TLR4; Signal transduction; Proinflammatory cytokine; Biology; Cell biology; Signal transducing adaptor protein; TLR2; Immunology; PI3K/AKT/mTOR pathway; Mechanism (biology); Receptor; Transcription factor; Inflammation; Genetics; Gene","score_opus":0.006905401994501181,"score_gpt":0.22205262120565633,"score_spread":0.21514721921115515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3151332003","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009311707,0.96717536,0.011819064,0.004207328,0.0010106764,0.000025807367,0.00007523781,0.00005398085,0.0063207317],"genre_scores_gemma":[0.04623682,0.9390964,0.00707061,0.0018953184,0.0030789827,0.000054127777,0.00023311471,0.000020147774,0.0023144525],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99912125,0.0002412006,0.00007551578,0.00022251952,0.00022397067,0.000115588795],"domain_scores_gemma":[0.9976584,0.0010706511,0.00021860878,0.00015465256,0.0006897372,0.00020786854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029072766,0.00082882005,0.0017004536,0.002201996,0.0006616221,0.0021278334,0.0011423259,0.0017772127,0.0040953644],"category_scores_gemma":[0.0015303836,0.00031119323,0.0008954232,0.0018590001,0.0016659779,0.004874631,0.0013606722,0.0030583038,0.0011163326],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005007155,0.00041057158,0.0066140597,0.013778262,0.00021654209,0.0007860895,0.0009484229,0.0013800195,0.034951974,0.059921883,0.010409778,0.87008166],"study_design_scores_gemma":[0.00009096795,0.001292164,0.019178834,0.0057000066,0.0005775144,0.00366261,0.0025772015,0.0044310614,0.026810851,0.09918628,0.8362271,0.00026544082],"about_ca_topic_score_codex":0.000985842,"about_ca_topic_score_gemma":0.00046263688,"teacher_disagreement_score":0.0040953644,"about_ca_system_score_codex":0.00092429575,"about_ca_system_score_gemma":0.0022283175,"threshold_uncertainty_score":0.015375316},"labels":[],"label_agreement":null},{"id":"W3156045381","doi":"","title":"Assessment of neutrophil function in canine cancer patients undergoing chemotherapy and correlation with neutrophil numbers.","year":2021,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Chemotherapy; Absolute neutrophil count; Lymphoma; Medicine; Respiratory burst; Neutrophil to lymphocyte ratio; Internal medicine; Canine Lymphoma; Neutrophile; Phagocytosis; Cancer; Gastroenterology; Immunology; Oncology; Lymphocyte; Neutropenia; Inflammation","score_opus":0.0063960173014738,"score_gpt":0.2065155490603684,"score_spread":0.2001195317588946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3156045381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99780434,0.00061154104,0.0002460902,0.000048976053,0.0000138829555,0.000013987411,0.00014620797,0.00000810525,0.0011067882],"genre_scores_gemma":[0.9992518,0.00007369115,0.00013956545,0.000013843517,0.0000056262634,0.000009618854,0.00013330262,7.5297874e-7,0.0003717953],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997063,0.00009259589,0.000027962695,0.00005610079,0.00006614173,0.000050747454],"domain_scores_gemma":[0.99896514,0.00028610794,0.00038634465,0.00005421906,0.00011801166,0.00019019788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005873003,0.00016755158,0.00019389564,0.00035745712,0.00013670954,0.00029520245,0.00011224844,0.0003176853,0.0018797616],"category_scores_gemma":[0.0015650294,0.0000933266,0.00011142271,0.00022777883,0.00020898748,0.00022329135,0.00023191803,0.00041880982,0.0003431166],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017034324,0.00010888266,0.98555017,0.000027404663,0.000045625264,0.00019198039,0.000057826484,0.00011463629,0.0053943433,0.00005146054,0.00030703962,0.006447253],"study_design_scores_gemma":[0.000026291942,0.0015488721,0.9923424,0.000009797139,0.000046124966,0.0018107641,0.00014355798,0.0009911443,0.0018944937,0.000063360174,0.0011164809,0.0000066463194],"about_ca_topic_score_codex":0.00046007673,"about_ca_topic_score_gemma":0.001036658,"teacher_disagreement_score":0.0018797616,"about_ca_system_score_codex":0.0002386666,"about_ca_system_score_gemma":0.00014955278,"threshold_uncertainty_score":0.0062884092},"labels":[],"label_agreement":null},{"id":"W3158835433","doi":"10.3389/fimmu.2021.662063","title":"Microbial Phagocytic Receptors and Their Potential Involvement in Cytokine Induction in Macrophages","year":2021,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; University of Toronto","keywords":"Cytokine; Receptor; Immunology; Microbiology; Phagocytosis; Macrophage; Biology; Chemistry; In vitro; Biochemistry","score_opus":0.01358850643616101,"score_gpt":0.24469557907553813,"score_spread":0.23110707263937713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158835433","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18742278,0.7952374,0.006273342,0.001394359,0.0005297963,0.00016733896,0.0004945948,0.00008387972,0.008396561],"genre_scores_gemma":[0.67787087,0.30516043,0.005218922,0.0010570162,0.0006431075,0.00030993376,0.0007058053,0.000023234681,0.009010741],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996773,0.000077374694,0.000029972041,0.00005125903,0.000058099547,0.000105931984],"domain_scores_gemma":[0.9998599,0.00003344406,0.000044156684,0.0000063469574,0.000035367888,0.000020795278],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005265609,0.00029680142,0.00043932936,0.00064258074,0.00020372472,0.00070944324,0.00032162815,0.0008365107,0.0013677679],"category_scores_gemma":[0.00033039233,0.0001988975,0.0007662322,0.00036796488,0.00027774958,0.00056699786,0.00055667834,0.0006429211,0.00057232426],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001934647,0.00027860308,0.007138292,0.011280327,0.00020766254,0.0071098316,0.0010716269,0.0005549794,0.8454496,0.0075359517,0.0031695922,0.114268854],"study_design_scores_gemma":[0.0003112582,0.0052522123,0.13033544,0.00322873,0.00083312026,0.02456653,0.0025542884,0.0025567363,0.5147719,0.013361486,0.30204922,0.00017910314],"about_ca_topic_score_codex":0.00020030241,"about_ca_topic_score_gemma":0.0001908026,"teacher_disagreement_score":0.0013677679,"about_ca_system_score_codex":0.00029165743,"about_ca_system_score_gemma":0.0002550704,"threshold_uncertainty_score":0.0045756698},"labels":[],"label_agreement":null},{"id":"W3159572149","doi":"10.1182/blood.2020010463","title":"TLR8 gain of function: a tall surprise","year":2021,"lang":"en","type":"letter","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Gain of function; Function (biology); Medicine; Biology; Cell biology; Genetics; Phenotype","score_opus":0.010696019344260486,"score_gpt":0.1997835176172399,"score_spread":0.1890874982729794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159572149","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002866785,0.0041866903,0.00012631352,0.9680972,0.025095996,0.000004412779,0.00003202917,0.000036455112,0.0021342135],"genre_scores_gemma":[0.0062624114,0.0047085946,0.00031989522,0.88314885,0.098003045,0.000027580269,0.000033193774,0.000035996745,0.007460414],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99795365,0.0006382217,0.00013853019,0.00028655818,0.00072151964,0.00026151506],"domain_scores_gemma":[0.9945326,0.0031624069,0.00019968506,0.0002124072,0.0008297177,0.0010632086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031445934,0.0007609026,0.0014634806,0.00046717928,0.0024352137,0.0036059357,0.001395576,0.02475523,0.0058690202],"category_scores_gemma":[0.013414503,0.0004126081,0.0008021959,0.0002801645,0.0036727549,0.0034260873,0.001976612,0.037925042,0.0048357025],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111038724,0.00003675744,0.00020698343,0.000035987407,0.000014812788,0.0006725767,0.000049319537,0.000041197876,0.0003233472,0.0032464634,0.9803612,0.014900201],"study_design_scores_gemma":[0.00021516667,0.00012504768,0.00071325654,0.00021023405,0.000030485442,0.0011035202,0.00035529243,0.00036399363,0.00065114093,0.02279207,0.9733766,0.00006312263],"about_ca_topic_score_codex":0.0019603774,"about_ca_topic_score_gemma":0.0029372314,"teacher_disagreement_score":0.02475523,"about_ca_system_score_codex":0.0028330577,"about_ca_system_score_gemma":0.0024290553,"threshold_uncertainty_score":0.020555317},"labels":[],"label_agreement":null},{"id":"W3159929043","doi":"10.1038/s41598-021-88386-2","title":"CpG-ODN induced antimicrobial immunity in neonatal chicks involves a substantial shift in serum metabolic profiles","year":2021,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of Alberta; University of Saskatchewan","funders":"Western Economic Diversification Canada; Genome Alberta; Canada Foundation for Innovation; Chicken Farmers of Saskatchewan; Alberta Livestock and Meat Agency; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Immune system; CpG Oligodeoxynucleotide; Betaine; Choline; Immunity; Innate immune system; Biology; Internal medicine; Chemistry; Endocrinology; Biochemistry; Immunology; Medicine; DNA methylation","score_opus":0.014224841203981112,"score_gpt":0.24117983206332347,"score_spread":0.22695499085934234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159929043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99629885,0.00094273745,0.0015723113,0.00005108005,0.000020919415,0.000023895484,0.00053135544,0.000024803147,0.0005341585],"genre_scores_gemma":[0.9933884,0.00074945803,0.002848125,0.00013427652,0.0000060400844,0.000062858926,0.00073455233,0.000011225244,0.0020650295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991894,0.000009356661,0.000007682544,0.000026094764,0.000020393583,0.000017569608],"domain_scores_gemma":[0.99987674,0.000011580328,0.000047089554,0.000006394716,0.000025000345,0.000033123142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000104049795,0.00025776177,0.00025305743,0.00017954869,0.00007719696,0.00014277833,0.00008682219,0.00024840576,0.00063235266],"category_scores_gemma":[0.00012665344,0.00013411019,0.00016494966,0.00008434021,0.00020952718,0.00014184635,0.00013458238,0.0004673198,0.00011341571],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019157886,0.000008502627,0.00048372734,0.000024320196,0.0000028722582,0.000011971703,0.000009894234,0.000013021834,0.9987832,0.0000070864144,0.00000754196,0.00045630842],"study_design_scores_gemma":[0.000011479075,0.00123754,0.05068673,0.000011525982,0.000022958426,0.00011409211,0.00009102394,0.00038471198,0.9466366,0.000021663196,0.000773508,0.0000081475255],"about_ca_topic_score_codex":0.0011587319,"about_ca_topic_score_gemma":0.0023791261,"teacher_disagreement_score":0.0011587319,"about_ca_system_score_codex":0.00021473106,"about_ca_system_score_gemma":0.00020185653,"threshold_uncertainty_score":0.002303958},"labels":[],"label_agreement":null},{"id":"W3159991196","doi":"10.1111/aji.13454","title":"IFN‐alpha receptor deficiency enhances host resistance to oral <i>Salmonella enterica</i> serovar Typhimurium infection during murine pregnancy","year":2021,"lang":"en","type":"article","venue":"American Journal of Reproductive Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; National Research Council Canada","funders":"National Institutes of Health","keywords":"Biology; Salmonella enterica; Placenta; Pregnancy; Spleen; Inflammation; Salmonella infection; Immunology; Tumor necrosis factor alpha; Fetus; Gestation; Salmonella; Bacteria","score_opus":0.0063312425125451035,"score_gpt":0.23653078572238015,"score_spread":0.23019954320983504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159991196","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99695396,0.0006458477,0.0007476622,0.00011226865,0.000028968716,0.000021677479,0.00038643894,0.000086326894,0.0010167115],"genre_scores_gemma":[0.9951984,0.0005800911,0.0007975314,0.00007654903,0.000011799796,0.000041239495,0.00033831786,0.000029336756,0.0029268041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997291,0.00005881274,0.000034876248,0.000053103307,0.000038953232,0.00008505531],"domain_scores_gemma":[0.9996125,0.000046911955,0.00015478223,0.000051148578,0.000017506864,0.00011718057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022969782,0.00038728278,0.00033282727,0.00028439943,0.00011981558,0.00041778447,0.00021045741,0.00042427628,0.0015208698],"category_scores_gemma":[0.00017057375,0.00031133508,0.00032756588,0.000112628,0.00031305364,0.0001924872,0.00019822369,0.0010184248,0.0006727666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005237245,0.000068592046,0.00032629573,0.00002343149,0.0000036049987,0.00007981928,0.00001627747,0.00004782258,0.9982237,0.00005262476,0.000036905538,0.0005972814],"study_design_scores_gemma":[0.00009359896,0.0029552255,0.013486672,0.000031042517,0.00003717461,0.0009550436,0.00012445389,0.0011132353,0.9791686,0.000077591234,0.0019454045,0.000012017376],"about_ca_topic_score_codex":0.00049991155,"about_ca_topic_score_gemma":0.0006749196,"teacher_disagreement_score":0.0015208698,"about_ca_system_score_codex":0.0003357692,"about_ca_system_score_gemma":0.00021984855,"threshold_uncertainty_score":0.0050878525},"labels":[],"label_agreement":null},{"id":"W3160540043","doi":"10.1016/j.it.2021.04.008","title":"Stepping up Th1 immunity to control phagosomal bacteria","year":2021,"lang":"en","type":"letter","venue":"Trends in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Salmonella enterica; Cytotoxic T cell; Biology; Immune system; Immunology; Effector; Acquired immune system; Immunity; Interferon; Microbiology; Salmonella; Pathogen; Virology; Bacteria","score_opus":0.019765453211139716,"score_gpt":0.2601955308235225,"score_spread":0.24043007761238278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160540043","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011297279,0.0056989426,0.0005524158,0.91888875,0.06890195,0.000028509116,0.000031495714,0.000067867826,0.004700368],"genre_scores_gemma":[0.016709933,0.0033620808,0.0009143639,0.8600401,0.103255965,0.00008252526,0.000027783815,0.000037429094,0.015569786],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99847776,0.00039373638,0.00013618499,0.00015083881,0.00053770596,0.00030380848],"domain_scores_gemma":[0.99668187,0.0016347768,0.00020905364,0.00015876912,0.0006401347,0.0006753356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025591394,0.0008150716,0.00097306067,0.00042357453,0.0020641438,0.0025021452,0.0009744342,0.025958603,0.0060580876],"category_scores_gemma":[0.008881158,0.00045090602,0.0008724304,0.00019816266,0.0027233062,0.0031191928,0.0017100192,0.032948732,0.0055891536],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020982079,0.000105905434,0.00058328954,0.00015000481,0.000027828766,0.0019979086,0.00011288142,0.000110559566,0.0018179019,0.0056217615,0.9590901,0.030171974],"study_design_scores_gemma":[0.00048020805,0.00025602453,0.0011763456,0.0001890581,0.00003320756,0.002418323,0.00022456903,0.00072777644,0.0016862205,0.0194815,0.97328264,0.00004410621],"about_ca_topic_score_codex":0.001127537,"about_ca_topic_score_gemma":0.0018314361,"teacher_disagreement_score":0.025958603,"about_ca_system_score_codex":0.0024271922,"about_ca_system_score_gemma":0.0017159497,"threshold_uncertainty_score":0.020266354},"labels":[],"label_agreement":null},{"id":"W3162018478","doi":"10.1016/j.acvdsp.2021.04.091","title":"TLR3 promotes venous thrombosis through neutrophil recruitment","year":2021,"lang":"en","type":"article","venue":"Archives of Cardiovascular Diseases Supplements","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Medicine; Venous thrombosis; Thrombosis; Internal medicine","score_opus":0.029337170515953782,"score_gpt":0.2689693704338315,"score_spread":0.23963219991787774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162018478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97743315,0.009119957,0.0024971995,0.0021105455,0.00058628415,0.000061271974,0.0006960365,0.00016697406,0.007328549],"genre_scores_gemma":[0.9895766,0.0020277505,0.00086388475,0.0004157891,0.00015492034,0.000036238904,0.000346336,0.000015108568,0.0065634046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997253,0.00009149807,0.000019600706,0.000026001011,0.000053199,0.000084560816],"domain_scores_gemma":[0.99986863,0.0000170222,0.000038166792,0.000013283745,0.000021433267,0.000041424286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002542708,0.00026747645,0.00023284418,0.00027074077,0.00017588823,0.0005200409,0.0001589066,0.00045489293,0.0073221964],"category_scores_gemma":[0.00025796803,0.00013960373,0.00041125822,0.00010719572,0.00017681965,0.00016186343,0.00032368265,0.0008593025,0.0011628546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0054356335,0.00065319106,0.0030749487,0.0003703603,0.000081638325,0.0004694891,0.000052891854,0.00014459601,0.9581663,0.00070108654,0.0030294189,0.027820371],"study_design_scores_gemma":[0.0014833509,0.008694055,0.11154438,0.0002859547,0.0003863906,0.0033353458,0.0006479242,0.003767433,0.82147574,0.002269751,0.046050306,0.000059369206],"about_ca_topic_score_codex":0.00046178102,"about_ca_topic_score_gemma":0.00083468814,"teacher_disagreement_score":0.0073221964,"about_ca_system_score_codex":0.00024172755,"about_ca_system_score_gemma":0.00032886886,"threshold_uncertainty_score":0.024495184},"labels":[],"label_agreement":null},{"id":"W3162908834","doi":"10.1097/01.hj.0000752296.37530.ef","title":"Role of a Classical Innate Immune Receptor in Chemo-induced Hearing Loss","year":2021,"lang":"en","type":"article","venue":"The Hearing Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Sciences and Engineering Research Council of Canada","funders":"","keywords":"Ototoxicity; Cisplatin; Medicine; Hearing loss; Cancer; Adverse effect; Chemotherapy; Immunology; Oncology; Internal medicine; Cancer research; Audiology","score_opus":0.0183914264219071,"score_gpt":0.25106059314024876,"score_spread":0.23266916671834165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162908834","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33133364,0.57580596,0.026781587,0.004999454,0.0020419804,0.00059101067,0.0010402129,0.00087572576,0.056530524],"genre_scores_gemma":[0.82180345,0.14241762,0.011752921,0.002195651,0.0006579087,0.00025259738,0.0009262788,0.000044998178,0.019948594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982125,0.000027724365,0.00001474137,0.000038551385,0.000050438302,0.000047339767],"domain_scores_gemma":[0.9999225,0.000014436382,0.00002100986,0.0000046195387,0.000016976994,0.000020464184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025028148,0.00044326365,0.00033049885,0.0005725509,0.00024430337,0.0003975658,0.00042811417,0.00059935986,0.005707011],"category_scores_gemma":[0.00015504089,0.000115574105,0.0004876058,0.00016466396,0.00037139675,0.00053969823,0.00045614518,0.00070460775,0.0015479567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017541727,0.0006462664,0.006862921,0.0037736278,0.00009571901,0.004983671,0.0001866594,0.0006155207,0.74388474,0.011563311,0.009432148,0.21620134],"study_design_scores_gemma":[0.00039066758,0.007344639,0.079349905,0.0016482626,0.0005662948,0.034661457,0.00097486057,0.006536193,0.48278642,0.013953954,0.37165967,0.00012770543],"about_ca_topic_score_codex":0.00033026387,"about_ca_topic_score_gemma":0.00030815235,"teacher_disagreement_score":0.005707011,"about_ca_system_score_codex":0.0004065171,"about_ca_system_score_gemma":0.00042606427,"threshold_uncertainty_score":0.019091904},"labels":[],"label_agreement":null},{"id":"W3164308799","doi":"10.1016/j.biopha.2021.111784","title":"Interaction between non-coding RNAs and Toll-like receptors","year":2021,"lang":"en","type":"review","venue":"Biomedicine & Pharmacotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centennial College","funders":"Shahid Beheshti University of Medical Sciences","keywords":"TRIF; microRNA; Innate immune system; Biology; Receptor; Immune system; Signal transduction; Toll-like receptor; Pattern recognition receptor; Long non-coding RNA; Computational biology; Immunology; Gene; RNA; Cell biology; Genetics","score_opus":0.04887537566951046,"score_gpt":0.37896044138590473,"score_spread":0.3300850657163943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164308799","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015093456,0.99757487,0.00018840659,0.00018269198,0.00021662316,0.0000046633654,0.000021580094,0.000008495378,0.0016517339],"genre_scores_gemma":[0.00093472813,0.99731404,0.0002092042,0.000150635,0.00020609872,0.000007939302,0.00004149623,0.0000016631719,0.0011341226],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985325,0.00002638877,0.000018399558,0.000025690326,0.000059853486,0.000016477361],"domain_scores_gemma":[0.9998778,0.000056575413,0.000018550709,0.0000037076973,0.00003002996,0.00001321581],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002485849,0.000651501,0.0009189808,0.0013604396,0.000228196,0.00085963623,0.00052753574,0.00069190474,0.0040353592],"category_scores_gemma":[0.00035712007,0.0001778299,0.00034571628,0.0011950345,0.0002449602,0.00076535135,0.000568357,0.0010309652,0.0028934595],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060655046,0.0000530932,0.00018310298,0.016437495,0.00006688753,0.00031596742,0.00007196956,0.00023186617,0.0056527825,0.004148761,0.025467826,0.9473097],"study_design_scores_gemma":[0.0000059838585,0.00006301536,0.0005981976,0.0023479222,0.000051678948,0.0016073829,0.000040050494,0.00004474663,0.001139523,0.0012390624,0.9928508,0.00001179439],"about_ca_topic_score_codex":0.00042771318,"about_ca_topic_score_gemma":0.00066978246,"teacher_disagreement_score":0.0040353592,"about_ca_system_score_codex":0.00040045986,"about_ca_system_score_gemma":0.00070640154,"threshold_uncertainty_score":0.013499618},"labels":[],"label_agreement":null},{"id":"W3164669447","doi":"10.1159/000515738","title":"TLR7 Ligation Inhibits TLR8 Responsiveness in IL-27-Primed Human THP-1 Monocytes and Macrophages","year":2021,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"TLR7; Cytokine; Biology; Chemokine; Proinflammatory cytokine; Toll-like receptor; Cell biology; TLR9; Immunology; Gene expression; Innate immune system; Inflammation; Immune system","score_opus":0.014423795072758571,"score_gpt":0.26899942310060826,"score_spread":0.25457562802784967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164669447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9933258,0.001560172,0.0021305752,0.00022966955,0.0000883007,0.00007431872,0.00037947667,0.000044535664,0.002167044],"genre_scores_gemma":[0.98997635,0.0017143886,0.0034231117,0.0002359663,0.000065359214,0.0002132107,0.0011055379,0.000027704591,0.0032383173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996382,0.00009901235,0.000031611682,0.00003283091,0.000064450636,0.00013392998],"domain_scores_gemma":[0.9998301,0.00004931039,0.000024829606,0.000024740186,0.00003084306,0.00004013596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032008794,0.00033250757,0.00036733696,0.00017435719,0.00021900811,0.00028809372,0.00017790061,0.00022526273,0.0019256372],"category_scores_gemma":[0.000176163,0.00019925549,0.00031332328,0.00012436949,0.00027729874,0.00011367817,0.00025152348,0.00064687367,0.0012387783],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009166838,0.00015283715,0.00023210066,0.00007868629,0.000008522003,0.00010586651,0.00004541925,0.00006254015,0.9968637,0.00007404832,0.00014383583,0.001315649],"study_design_scores_gemma":[0.00013255513,0.0014466719,0.0032092726,0.000017773114,0.000024395351,0.00024927102,0.00010229204,0.0010795845,0.9906888,0.000065972185,0.002977625,0.000005864194],"about_ca_topic_score_codex":0.00036480182,"about_ca_topic_score_gemma":0.0005789254,"teacher_disagreement_score":0.0019256372,"about_ca_system_score_codex":0.00018746806,"about_ca_system_score_gemma":0.00041240302,"threshold_uncertainty_score":0.006441951},"labels":[],"label_agreement":null},{"id":"W3165001906","doi":"10.1111/jeb.13876","title":"Pathogen‐mediated selection favours the maintenance of innate immunity gene polymorphism in a widespread wild ungulate","year":2021,"lang":"en","type":"article","venue":"Journal of Evolutionary Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Balancing selection; Capreolus; Innate immune system; Genetics; Major histocompatibility complex; Natural selection; Evolutionary biology; Gene; Roe deer; Selection (genetic algorithm); Immune system; Zoology","score_opus":0.008178472322209345,"score_gpt":0.2264966889608422,"score_spread":0.21831821663863288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165001906","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996131,0.00008122875,0.00013636154,0.000007475058,9.813646e-7,8.913961e-7,0.000017485032,0.0000028956606,0.00013970515],"genre_scores_gemma":[0.99951315,0.000055815464,0.00023976703,0.000020666164,0.0000051492902,0.0000036342421,0.000067429944,0.0000029881037,0.00009146924],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997813,0.00004717176,0.000010517716,0.00010755903,0.000022662545,0.000030865744],"domain_scores_gemma":[0.99963117,0.00008261491,0.00017059731,0.000033547687,0.000026695685,0.00005531807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003075369,0.00017109793,0.00022816446,0.0006797648,0.00030596554,0.00041273164,0.0002432832,0.0003463457,0.00083061354],"category_scores_gemma":[0.00037489782,0.00014509312,0.00015280403,0.0003228539,0.0006868751,0.00022926218,0.00034092172,0.00031124044,0.000109644636],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000723834,0.00011508084,0.5192322,0.0000783024,0.00015192162,0.00064195937,0.001290645,0.00024609602,0.4670568,0.00037738844,0.00010372008,0.009982007],"study_design_scores_gemma":[0.0000052979804,0.00017403637,0.99613464,0.000010291896,0.00003025894,0.00059764565,0.0004244282,0.00041497173,0.0018390645,0.00012733295,0.00023358861,0.000008563478],"about_ca_topic_score_codex":0.0010598364,"about_ca_topic_score_gemma":0.0027825506,"teacher_disagreement_score":0.0010598364,"about_ca_system_score_codex":0.00017081169,"about_ca_system_score_gemma":0.00012897784,"threshold_uncertainty_score":0.002778709},"labels":[],"label_agreement":null},{"id":"W3165509857","doi":"10.1016/j.molimm.2021.05.008","title":"Identification of imidazoquinoline derivative (IQD) interacting sites of porcine TLR8 and the underlying species specificity","year":2021,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Key Research and Development Program of China; Priority Academic Program Development of Jiangsu Higher Education Institutions; National Natural Science Foundation of China","keywords":"Innate immune system; Receptor; Biology; Binding site; Intracellular; Mutant; Cell biology; Immune system; Agonist; Signal transducing adaptor protein; Chemistry; Signal transduction; Biochemistry; Immunology; Gene","score_opus":0.018378939942972534,"score_gpt":0.25625191094678273,"score_spread":0.2378729710038102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165509857","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856516,0.002045547,0.008804092,0.0001704842,0.00003458332,0.000036777397,0.00031927493,0.00006182826,0.0028759006],"genre_scores_gemma":[0.99486697,0.00031970243,0.003093069,0.000095043,0.000005852299,0.000016865792,0.0003770081,0.0000063704297,0.0012192356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999025,0.000015642563,0.000004389717,0.000029119135,0.00002003932,0.000028348994],"domain_scores_gemma":[0.9999391,0.000010767192,0.000020481899,0.0000063148254,0.000012426029,0.000010983651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013098407,0.00019524102,0.00018549334,0.0001191134,0.00015421287,0.00012935647,0.00043589348,0.00029110519,0.0027650043],"category_scores_gemma":[0.0001589848,0.00009507859,0.00024763722,0.00007731984,0.00017241103,0.00016024636,0.00018165956,0.0003106733,0.0004668109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020220423,0.000017430206,0.0007053343,0.00004599813,0.000007086311,0.00014678735,0.000021449623,0.00016664798,0.9966336,0.00027982934,0.0000785287,0.0016951632],"study_design_scores_gemma":[0.000059290614,0.00045150082,0.014978927,0.00002550549,0.000037911374,0.0016227769,0.00016341946,0.0058004903,0.96816206,0.0006267365,0.00804627,0.000025196325],"about_ca_topic_score_codex":0.00058266975,"about_ca_topic_score_gemma":0.0006673552,"teacher_disagreement_score":0.0027650043,"about_ca_system_score_codex":0.00024555836,"about_ca_system_score_gemma":0.00011269406,"threshold_uncertainty_score":0.009249866},"labels":[],"label_agreement":null},{"id":"W3166815846","doi":"10.1096/fasebj.2021.35.s1.05502","title":"NF‐κB and Glucocorticoid Receptor Synergize to Enable Pro‐inflammatory Signaling via Toll‐like Receptor 2 in Pulmonary Epithelial Cells","year":2021,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"TLR2; Chromatin immunoprecipitation; Glucocorticoid receptor; A549 cell; Innate immune system; Toll-like receptor; NF-κB; Inflammation; Transcription factor; Receptor; Cell biology; Biology; Pattern recognition receptor; Immune system; Cancer research; Chemistry; Immunology; Glucocorticoid; Promoter; Gene expression; Cell; Biochemistry","score_opus":0.007894651208449347,"score_gpt":0.20761241163102026,"score_spread":0.19971776042257092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3166815846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93174726,0.035290048,0.015978128,0.0012081772,0.0006040252,0.00035008026,0.0044647176,0.0005627775,0.009794806],"genre_scores_gemma":[0.97919184,0.0062858155,0.004843781,0.00039440693,0.0000922984,0.00036316804,0.0020411534,0.000032589847,0.006754928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999479,0.00008533339,0.000050146835,0.00009865353,0.00015393343,0.0001329477],"domain_scores_gemma":[0.99990726,0.000012766188,0.000019284274,0.000023982577,0.000011621773,0.00002510387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000305697,0.000504554,0.00044172935,0.00023943745,0.0002327292,0.00049647706,0.00031139416,0.00045686233,0.0024793714],"category_scores_gemma":[0.00014563325,0.00027999413,0.00063185074,0.0002205031,0.00024861237,0.00026730463,0.00034752899,0.00080946356,0.001188275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014548437,0.0000442314,0.00016271257,0.00015111371,0.000008534925,0.00008375103,0.000012641704,0.000051456333,0.99822766,0.00011187168,0.00012843522,0.0008720348],"study_design_scores_gemma":[0.00012252462,0.00075091055,0.009335885,0.000028537032,0.000046421756,0.0009510799,0.00009038088,0.0010059555,0.97316587,0.00020243731,0.014283207,0.00001683545],"about_ca_topic_score_codex":0.0005220509,"about_ca_topic_score_gemma":0.0009354932,"teacher_disagreement_score":0.0024793714,"about_ca_system_score_codex":0.00037028192,"about_ca_system_score_gemma":0.000362607,"threshold_uncertainty_score":0.008294344},"labels":[],"label_agreement":null},{"id":"W3167860552","doi":"10.1089/vim.2020.0308","title":"The Role of Type I Interferon Signaling in Regulating Cytokine Production and Cell Survival in Bone Marrow-Derived Macrophages","year":2021,"lang":"en","type":"article","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cytokine; TLR7; Immunology; Biology; TLR4; Tumor necrosis factor alpha; Interferon; Toll-like receptor; Lipopolysaccharide; Receptor; Imiquimod; Inflammation; Innate immune system; Immune system","score_opus":0.0068271359981276585,"score_gpt":0.21280615414083354,"score_spread":0.2059790181427059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3167860552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9594267,0.029753923,0.0077134375,0.0003673942,0.00008325393,0.00004025256,0.00029714179,0.000038048005,0.00227989],"genre_scores_gemma":[0.98921484,0.0067114634,0.0026569539,0.00013007942,0.00004241684,0.000042804877,0.00012238794,0.000008115733,0.0010708096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997588,0.00006854426,0.000022542554,0.00003856788,0.00004627788,0.000065384935],"domain_scores_gemma":[0.99987984,0.000019035468,0.000041541025,0.000013849655,0.000022018612,0.000023556608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031213395,0.00032317635,0.00024587297,0.0001927899,0.00017466886,0.00040350598,0.00020487109,0.0003771788,0.00046271714],"category_scores_gemma":[0.00014796892,0.00012269155,0.00025442382,0.00009943641,0.00024260543,0.0003278055,0.00021914285,0.0004700511,0.0002582289],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033699305,0.000022279637,0.0015359138,0.00007372154,0.0000059661706,0.00009821157,0.00004078339,0.000065207605,0.99365485,0.00025246054,0.00002856212,0.0038850692],"study_design_scores_gemma":[0.00006064181,0.0012824391,0.0369053,0.00008352057,0.000084897496,0.00092545216,0.00031237365,0.0016990305,0.95193034,0.00093791884,0.0057601337,0.000018070274],"about_ca_topic_score_codex":0.0001847407,"about_ca_topic_score_gemma":0.00028920884,"teacher_disagreement_score":0.00046271714,"about_ca_system_score_codex":0.00023149983,"about_ca_system_score_gemma":0.00019356259,"threshold_uncertainty_score":0.0016797185},"labels":[],"label_agreement":null},{"id":"W3170040276","doi":"10.1096/fasebj.2021.35.s1.04657","title":"The Role of CSF1R in Early Tooth Development","year":2021,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of British Columbia","funders":"","keywords":"Cementum; Osteoclast; Cell biology; Morphogenesis; Dental alveolus; Biology; Mineralized tissues; Odontoblast; Bone remodeling; Dentin; Pathology; Receptor; Dentistry; Endocrinology; Medicine; Biochemistry; Gene","score_opus":0.007392346061670398,"score_gpt":0.2091024941962621,"score_spread":0.2017101481345917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3170040276","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8206578,0.1569209,0.009304756,0.0008003451,0.00019579548,0.0000971441,0.00047293236,0.00027725458,0.011273008],"genre_scores_gemma":[0.94656694,0.042365104,0.005563192,0.00024247433,0.000108461296,0.000043211192,0.00020535811,0.000022342629,0.0048829424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998299,0.000024233126,0.000014354107,0.000032606687,0.000054924778,0.000043949924],"domain_scores_gemma":[0.9998841,0.000021594413,0.000033198117,0.000006646173,0.000024294954,0.000030082318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002485517,0.00033980276,0.00030708304,0.00048290959,0.00025653688,0.0003479812,0.00025127255,0.0004041849,0.0004384606],"category_scores_gemma":[0.00020423351,0.00012605522,0.00019346591,0.0001377371,0.000410817,0.00026515545,0.0003178859,0.0004007077,0.00015474965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029384354,0.000040053314,0.0048816083,0.00048633022,0.0000088354245,0.0014398086,0.00030850564,0.0002978155,0.919581,0.004199305,0.00038302713,0.06807984],"study_design_scores_gemma":[0.000056014058,0.0010048515,0.13578942,0.00034699432,0.00009714482,0.0074257553,0.0006183501,0.0022038817,0.7766311,0.0042464207,0.071506165,0.000073898445],"about_ca_topic_score_codex":0.0018322007,"about_ca_topic_score_gemma":0.0014633364,"teacher_disagreement_score":0.0018322007,"about_ca_system_score_codex":0.00049491687,"about_ca_system_score_gemma":0.0006500234,"threshold_uncertainty_score":0.003643036},"labels":[],"label_agreement":null},{"id":"W3172207088","doi":"10.1101/2021.06.16.448779","title":"Bacterial factors drive the differential targeting of Guanylate Binding Proteins to <i>Francisella</i> and <i>Shigella</i>","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Biology; Francisella; Shigella flexneri; Shigella; Francisella tularensis; Cell biology; Microbiology; Bacteria; Genetics; Escherichia coli; Salmonella","score_opus":0.007924368923832302,"score_gpt":0.19465280415834357,"score_spread":0.18672843523451127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172207088","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987018,0.00026145167,0.0004039915,0.000027934917,0.000007839209,0.0000080061445,0.000107702355,0.000017007997,0.00046423258],"genre_scores_gemma":[0.99840003,0.00010194585,0.00044438732,0.000032497206,0.00000325642,0.000013364136,0.00028863217,0.000012376473,0.0007035009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998386,0.000025177427,0.000012257024,0.000024286692,0.000032269127,0.000067340516],"domain_scores_gemma":[0.9998654,0.00003240646,0.00003918513,0.000012171852,0.000015358031,0.00003542726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010691162,0.0002510661,0.00018175364,0.00011285182,0.000092495015,0.00022533727,0.00014721206,0.0002518794,0.0008033166],"category_scores_gemma":[0.00015327611,0.00015588065,0.00020010998,0.00006941942,0.00015896161,0.00013326488,0.00032065637,0.0003022239,0.00033063907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036849586,0.000004803235,0.00011806731,0.00000971619,8.894968e-7,0.000012328994,0.0000059075446,0.000008043667,0.9996698,0.00001700582,0.000009321452,0.00010729278],"study_design_scores_gemma":[0.0000068205236,0.00020233181,0.016920798,0.0000075186135,0.000008787593,0.00018756818,0.00008248157,0.00080382166,0.98067266,0.000025213893,0.0010764188,0.0000055773876],"about_ca_topic_score_codex":0.0012467466,"about_ca_topic_score_gemma":0.0013125883,"teacher_disagreement_score":0.0012467466,"about_ca_system_score_codex":0.00030986988,"about_ca_system_score_gemma":0.0001300214,"threshold_uncertainty_score":0.0026873946},"labels":[],"label_agreement":null},{"id":"W3172266806","doi":"10.1096/fasebj.24.1_supplement.110.5","title":"Increase toll‐like receptor 4 expression after ischemia/reperfusion contributes to myocardial apoptosis: role of PI3Kγ/NFκB pathway","year":2010,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"TLR4; Apoptosis; PI3K/AKT/mTOR pathway; Myocyte; Phosphorylation; Cardiac myocyte; Signal transduction; Receptor; Cell biology; Chemistry; Medicine; Internal medicine; Endocrinology; Biology; Biochemistry","score_opus":0.0032977542871893916,"score_gpt":0.19562499313537626,"score_spread":0.19232723884818687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3172266806","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9629223,0.021205217,0.008640885,0.001328235,0.00035367263,0.000095957694,0.0010445351,0.00029011277,0.0041190796],"genre_scores_gemma":[0.97665787,0.008812927,0.004146825,0.00042422942,0.00013801613,0.0001532522,0.0007609595,0.000021207203,0.008884856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998411,0.000027654647,0.000018422845,0.000030363188,0.000030201376,0.000052254112],"domain_scores_gemma":[0.999926,0.0000058360956,0.000031903608,0.000006134424,0.000014663157,0.000015434802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023786287,0.0004679876,0.0002797433,0.00035376675,0.00018513764,0.00030951673,0.00017828286,0.00038544487,0.0054896884],"category_scores_gemma":[0.000117558026,0.00014082975,0.00052689604,0.00016580037,0.00024037779,0.0005011088,0.00028281414,0.00070424523,0.0006893609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009706555,0.0001423505,0.001363918,0.0003464279,0.000027900676,0.00041130447,0.000035340432,0.0000552465,0.99000496,0.00018509911,0.0002717783,0.0061851],"study_design_scores_gemma":[0.00021531504,0.0023180074,0.05647938,0.0000924427,0.00018166497,0.002363744,0.00026374185,0.0010240143,0.92896974,0.00068504026,0.0073878416,0.000019180226],"about_ca_topic_score_codex":0.00024591424,"about_ca_topic_score_gemma":0.00025880293,"teacher_disagreement_score":0.0054896884,"about_ca_system_score_codex":0.0002432477,"about_ca_system_score_gemma":0.0002239991,"threshold_uncertainty_score":0.018364787},"labels":[],"label_agreement":null},{"id":"W3173750665","doi":"10.1096/fasebj.20.4.a744","title":"Pivotal role of phospholipase C in cardiac TNF‐α expression during endotoxemia","year":2006,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Phospholipase C; Tumor necrosis factor alpha; Sepsis; Lipopolysaccharide; Gene knockdown; Medicine; Endocrinology; Phospholipase; Downregulation and upregulation; Internal medicine; Tyrosine kinase; Stimulation; Pharmacology; Immunology; Biology; Enzyme; Receptor; Biochemistry; Gene","score_opus":0.0036189142108339636,"score_gpt":0.19379870026951151,"score_spread":0.19017978605867755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173750665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9794668,0.01307022,0.005018474,0.0004702673,0.00011340847,0.000046320325,0.00026849503,0.00008578704,0.0014603547],"genre_scores_gemma":[0.9944258,0.0032263051,0.0012342971,0.00012045868,0.000059384274,0.000041122126,0.00022228886,0.000009567352,0.0006607135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998696,0.000029348515,0.00001657979,0.00002786256,0.000026330754,0.000030265008],"domain_scores_gemma":[0.99979323,0.000023181892,0.00007372827,0.000018986611,0.000024633897,0.00006617334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021746251,0.0003543478,0.00031253597,0.00028085825,0.00016159433,0.00029545501,0.000114062874,0.0003583227,0.00072111597],"category_scores_gemma":[0.00020498695,0.00008830688,0.00029162297,0.00016434709,0.00029775657,0.00029466258,0.00020337693,0.00077572506,0.00018347957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011029216,0.000032245032,0.0008376964,0.00009594766,0.000009681151,0.00026850813,0.000025554158,0.00003763859,0.99505734,0.00007943796,0.000050893454,0.0024021573],"study_design_scores_gemma":[0.00015949037,0.000862328,0.057800338,0.000049604216,0.00008694196,0.0011347423,0.00013806729,0.0012668035,0.9352248,0.00026799555,0.002992827,0.000015988611],"about_ca_topic_score_codex":0.0001462429,"about_ca_topic_score_gemma":0.00013939754,"teacher_disagreement_score":0.00072111597,"about_ca_system_score_codex":0.0002997632,"about_ca_system_score_gemma":0.00020463778,"threshold_uncertainty_score":0.0024124384},"labels":[],"label_agreement":null},{"id":"W3174240851","doi":"10.3389/fimmu.2021.650808","title":"The Inhibitory Receptor CLEC12A Regulates PI3K-Akt Signaling to Inhibit Neutrophil Activation and Cytokine Release","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"National Institute of General Medical Sciences; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research; Centre Hospitalier Universitaire de Québec; National Institute on Alcohol Abuse and Alcoholism; Arthritis Society","keywords":"PI3K/AKT/mTOR pathway; Protein kinase B; Signal transduction; Cell biology; Phosphorylation; p38 mitogen-activated protein kinases; Inflammation; Chemistry; Kinase; Biology; MAPK/ERK pathway; Immunology","score_opus":0.005028278023706537,"score_gpt":0.19721587964360687,"score_spread":0.19218760161990034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174240851","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95576656,0.018252885,0.011426617,0.0020081056,0.00029732723,0.00018896275,0.0014816971,0.0004744936,0.010103409],"genre_scores_gemma":[0.9887815,0.003238137,0.0029718797,0.00019286791,0.000027527836,0.00006734586,0.0004752609,0.000022071259,0.0042233793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998006,0.00002490172,0.000015490434,0.000027590622,0.00006189777,0.0000695928],"domain_scores_gemma":[0.99993396,0.0000053525837,0.000017083243,0.0000064977726,0.000013586128,0.000023576156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019347771,0.00028881122,0.0003121161,0.0002442314,0.00020841516,0.00041304846,0.00024680613,0.00031217324,0.0021168776],"category_scores_gemma":[0.00012977257,0.00012577571,0.0003270535,0.00016192949,0.00023825237,0.00021072567,0.00022642854,0.0011103436,0.0007381426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005939304,0.000087174536,0.00042188252,0.00013588314,0.000020764655,0.000068229376,0.00001466999,0.00029531153,0.9902997,0.00064524484,0.0006716914,0.006745519],"study_design_scores_gemma":[0.00012277314,0.00039490964,0.005696124,0.000017933873,0.000042390147,0.000299067,0.000034194592,0.0032598726,0.9748811,0.00027927835,0.014961302,0.000011097674],"about_ca_topic_score_codex":0.0009417583,"about_ca_topic_score_gemma":0.0018764444,"teacher_disagreement_score":0.0021168776,"about_ca_system_score_codex":0.00054410973,"about_ca_system_score_gemma":0.0005486387,"threshold_uncertainty_score":0.0070816875},"labels":[],"label_agreement":null},{"id":"W3174673823","doi":"10.2139/ssrn.3307530","title":"Toll-Like Receptor 2 Expression on c-kit+ Cells Tracks the Emergence of Definitive Hematopoietic Progenitors in a Pre-Circulation Embryo","year":2018,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Haematopoiesis; Embryo; Toll-like receptor; Circulation (fluid dynamics); Cell biology; Progenitor cell; Toll; Biology; Immunology; Receptor; Stem cell; Innate immune system; Genetics; Physics","score_opus":0.007133121820249026,"score_gpt":0.23572014507566946,"score_spread":0.22858702325542044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174673823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9796966,0.0027712386,0.0068124784,0.00013194024,0.00005870019,0.000037052225,0.0010090593,0.00010994284,0.009372896],"genre_scores_gemma":[0.9815962,0.0010100713,0.0029394988,0.00012230287,0.000023870076,0.00003552204,0.0009190636,0.0000721113,0.013281418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991584,0.000007461778,0.000006223363,0.000022278093,0.000026577829,0.00002159304],"domain_scores_gemma":[0.9997538,0.00007327437,0.00005345307,0.000012773532,0.000033248118,0.00007337353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011570014,0.00011290369,0.000307187,0.00036470304,0.00024346093,0.00077510177,0.00025103978,0.00035885224,0.0031433022],"category_scores_gemma":[0.00033093392,0.00031245314,0.00013637428,0.00015806727,0.00020104306,0.00037241663,0.00044240337,0.0015856525,0.0012017636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079094165,0.00002480147,0.0077861575,0.0000897512,0.000015498677,0.0007910766,0.0003511265,0.00025114662,0.97794515,0.001903822,0.00054584834,0.009504619],"study_design_scores_gemma":[0.00005111319,0.00041513456,0.320554,0.00020807685,0.00007360734,0.0017166946,0.0012531502,0.0029889217,0.6552852,0.0011007967,0.016316267,0.000037151607],"about_ca_topic_score_codex":0.0011839799,"about_ca_topic_score_gemma":0.0035022716,"teacher_disagreement_score":0.0031433022,"about_ca_system_score_codex":0.00035129892,"about_ca_system_score_gemma":0.00028042236,"threshold_uncertainty_score":0.010515392},"labels":[],"label_agreement":null},{"id":"W3174862079","doi":"10.21769/bioprotoc.4078","title":"Immunofluorescence of GFAP and TNF-α in the Mouse Hypothalamus","year":2021,"lang":"en","type":"article","venue":"BIO-PROTOCOL","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Banting and Best Diabetes Centre, University of Toronto; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Immunofluorescence; Hypothalamus; Immunostaining; Neuropeptide; Biology; Glial fibrillary acidic protein; Endoplasmic reticulum; Antibody; Cell biology; Pathology; Immunohistochemistry; Neuroscience; Immunology; Medicine; Biochemistry","score_opus":0.016160273886123188,"score_gpt":0.27404965948046045,"score_spread":0.2578893855943373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174862079","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60121095,0.027097043,0.30592936,0.0011751967,0.0023213807,0.0018042665,0.012375654,0.004933912,0.043152276],"genre_scores_gemma":[0.54645187,0.030209083,0.32986838,0.00084585673,0.0006781512,0.0051262844,0.0150323985,0.0022382578,0.069549724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993844,0.00005605631,0.00006789376,0.00019686033,0.0001686899,0.00012604664],"domain_scores_gemma":[0.99961793,0.000046359477,0.00007930427,0.00005537518,0.00011355165,0.00008734808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007021075,0.0010618187,0.00050300895,0.0016206076,0.00056719535,0.00048217087,0.0006309848,0.000860136,0.005346678],"category_scores_gemma":[0.00027861874,0.00059956126,0.00071691663,0.0006101906,0.00063349964,0.00063219445,0.0004978971,0.0023100083,0.0030507124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012324085,0.000029682242,0.000091060174,0.00018041424,0.000010181032,0.00011332427,0.0000624369,0.000037427733,0.99687636,0.00044461136,0.00017024031,0.0018610427],"study_design_scores_gemma":[0.00004101247,0.0003479268,0.0028293466,0.00014728509,0.000048980986,0.0007702091,0.000090077796,0.00055392133,0.9801297,0.00034987263,0.014673972,0.000017734983],"about_ca_topic_score_codex":0.00057297514,"about_ca_topic_score_gemma":0.0011059827,"teacher_disagreement_score":0.005346678,"about_ca_system_score_codex":0.00036088238,"about_ca_system_score_gemma":0.0004881195,"threshold_uncertainty_score":0.01788646},"labels":[],"label_agreement":null},{"id":"W3174916162","doi":"10.1096/fasebj.20.4.a650-b","title":"Polymorphisms in pulmonary innate immune system genes of swine","year":2006,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Guelph","funders":"Ontario Ministry of Food and Agriculture","keywords":"Innate immune system; Single-nucleotide polymorphism; Biology; Single-strand conformation polymorphism; Gene; Surfactant protein D; Immune system; Collectin; Complement system; Coding region; Molecular biology; Genetics; Polymerase chain reaction; Immunology; Genotype","score_opus":0.006833181336561174,"score_gpt":0.19896565386950116,"score_spread":0.19213247253294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3174916162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99925965,0.00007260587,0.00033143183,0.000023350416,0.0000071515706,0.0000028840475,0.00008581758,0.000003321431,0.00021368073],"genre_scores_gemma":[0.9988524,0.00004689891,0.00043853244,0.000050993953,0.0000113501865,0.000008780888,0.0002420527,0.000005276888,0.00034378254],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998273,0.000049416314,0.00001840073,0.00005030372,0.00002736907,0.000027202479],"domain_scores_gemma":[0.9997751,0.00007708095,0.000084582694,0.00001917266,0.000015307076,0.000028716513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025659706,0.00023195872,0.00016180324,0.00027765162,0.00013229037,0.00018812146,0.00009974077,0.00035241983,0.0012997338],"category_scores_gemma":[0.00033952796,0.00013454235,0.00022310301,0.00018050912,0.00025175166,0.00010257022,0.00011483073,0.00021870388,0.00019783832],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010501986,0.00011270646,0.48347858,0.00008165273,0.00018050038,0.0019320402,0.00029066225,0.00023664684,0.50421995,0.00024594393,0.0002095837,0.007961583],"study_design_scores_gemma":[0.00002739145,0.00045439994,0.9899741,0.000009915211,0.0000508881,0.002322089,0.00011548255,0.00035482124,0.005695956,0.00010530984,0.0008822456,0.000007391387],"about_ca_topic_score_codex":0.00044472216,"about_ca_topic_score_gemma":0.0006571255,"teacher_disagreement_score":0.0012997338,"about_ca_system_score_codex":0.00009860246,"about_ca_system_score_gemma":0.000082798935,"threshold_uncertainty_score":0.0043480396},"labels":[],"label_agreement":null},{"id":"W3175450549","doi":"10.1096/fasebj.26.1_supplement.835.10","title":"Anti‐inflammatory benefits of retinoids: retinoic acid and oxidatively‐transformed β‐carotene induce neutrophil apoptosis and inhibit leukotriene B <sup>4</sup> synthesis","year":2012,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Proinflammatory cytokine; Apoptosis; Inflammation; Retinoid; Retinoic acid; Immunology; Context (archaeology); Innate immune system; Biology; Chemistry; Immune system; Biochemistry","score_opus":0.012923231098796608,"score_gpt":0.20972471255582004,"score_spread":0.19680148145702342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175450549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96097904,0.03076317,0.003637807,0.00039226748,0.000056492383,0.000054600365,0.00037578173,0.00010331746,0.0036374081],"genre_scores_gemma":[0.987958,0.005415367,0.0031374546,0.00009678581,0.000022033935,0.000039416816,0.00026694837,0.000012567267,0.0030515625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968743,0.00010873909,0.000036181347,0.000049494993,0.00006036972,0.000057652782],"domain_scores_gemma":[0.99969125,0.00006949997,0.00008800957,0.0000457103,0.000056163863,0.000049378075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000430169,0.0003961014,0.000261272,0.00033558873,0.0001484548,0.00039223186,0.00022424718,0.00045642923,0.0020953096],"category_scores_gemma":[0.0002960765,0.00012864915,0.00021642887,0.00014274525,0.0004123527,0.0002443919,0.00027361338,0.0004046446,0.00046364806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045818766,0.000030546948,0.0003247211,0.00013797078,0.000010708017,0.000049571576,0.000014307172,0.000039266175,0.996209,0.000061000133,0.000026571332,0.00263806],"study_design_scores_gemma":[0.0000785704,0.0015248844,0.009676685,0.000039458133,0.00005173271,0.00052798196,0.00005992738,0.0001685403,0.9832812,0.000097883116,0.0044882935,0.0000049360847],"about_ca_topic_score_codex":0.00082918856,"about_ca_topic_score_gemma":0.0010378116,"teacher_disagreement_score":0.0020953096,"about_ca_system_score_codex":0.00031300532,"about_ca_system_score_gemma":0.00026764735,"threshold_uncertainty_score":0.007009506},"labels":[],"label_agreement":null},{"id":"W3175906547","doi":"10.1096/fasebj.20.4.a651","title":"TRIF is essential for the clearance of Pseudomonas aeruginosa from the mouse lung","year":2006,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; IWK Health Centre; Christopher Columbus Fellowship Foundation","keywords":"TRIF; Pseudomonas aeruginosa; Lung; Microbiology; Immunology; Signal transduction; Lung infection; Toll-like receptor; Biology; Medicine; Innate immune system; Immune system; Bacteria; Cell biology; Internal medicine","score_opus":0.008198373437509199,"score_gpt":0.22887249786168984,"score_spread":0.22067412442418063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3175906547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97477394,0.0040870253,0.0101811895,0.0010117051,0.00014070932,0.00011558428,0.0030596016,0.0007716212,0.005858635],"genre_scores_gemma":[0.97349584,0.0018225526,0.008388708,0.00023225059,0.000053239175,0.00019247789,0.003944903,0.0002484728,0.011621404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991698,0.00014925399,0.00009174897,0.00012298697,0.00022854388,0.00023766434],"domain_scores_gemma":[0.9990606,0.000075924385,0.0002709289,0.00011111765,0.00010828885,0.0003731982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000507355,0.0006516597,0.00050172966,0.0010165176,0.0004068063,0.00061022927,0.00036282573,0.0008405385,0.0035718374],"category_scores_gemma":[0.00045292248,0.0005935803,0.0005451995,0.00021141878,0.00044777873,0.00053419796,0.00048365424,0.0014604998,0.002014323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029881106,0.000059830756,0.00026508636,0.000049132337,0.000006510849,0.00013654915,0.000022452716,0.000049091075,0.99731785,0.0002520353,0.00014549297,0.0013972569],"study_design_scores_gemma":[0.00015794933,0.000822495,0.020500598,0.000079396224,0.000044938086,0.0027949314,0.00012933069,0.0022535205,0.9612051,0.00047944085,0.011510186,0.000022269229],"about_ca_topic_score_codex":0.0006252558,"about_ca_topic_score_gemma":0.0007728901,"teacher_disagreement_score":0.0035718374,"about_ca_system_score_codex":0.00065246917,"about_ca_system_score_gemma":0.00055753323,"threshold_uncertainty_score":0.011949003},"labels":[],"label_agreement":null},{"id":"W3176005267","doi":"10.1096/fasebj.2019.33.1_supplement.lb254","title":"Glucocorticoids and Inflammatory Cytokines Synergize to Maintain TLR2 Expression in Airway Epithelial Cells","year":2019,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"TLR2; A549 cell; Gene silencing; Downregulation and upregulation; Tumor necrosis factor alpha; Inflammation; Chemistry; Receptor; Molecular biology; Transcription factor; Toll-like receptor; Proinflammatory cytokine; Innate immune system; Glucocorticoid receptor; Gene expression; Cancer research; Biology; Immunology; Gene; Cell; Biochemistry","score_opus":0.0049496496543848635,"score_gpt":0.20777172192509044,"score_spread":0.2028220722707056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176005267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95379806,0.02355573,0.008065765,0.0010160052,0.0006904365,0.0003698043,0.005132376,0.00039086453,0.0069810436],"genre_scores_gemma":[0.9816544,0.0046371506,0.0049365195,0.00057464995,0.00017823381,0.00042244323,0.0028521328,0.000045986046,0.004698409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900526,0.00021759556,0.00009220607,0.00021181394,0.00026381016,0.00020944269],"domain_scores_gemma":[0.99978966,0.0000389806,0.000042794058,0.000043129407,0.00003042023,0.000055028475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039375594,0.0004889663,0.00062153436,0.00027738808,0.00030978688,0.0007278173,0.00033432958,0.0005328539,0.0029492823],"category_scores_gemma":[0.00029405975,0.00028672913,0.0008052357,0.00023285262,0.00031693839,0.00029579914,0.00038990128,0.00082762324,0.001304915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050092896,0.00008662613,0.00038465377,0.00019629498,0.00001243681,0.000071352726,0.000020320289,0.000084284395,0.996443,0.00008393346,0.00024018726,0.001876055],"study_design_scores_gemma":[0.00016040442,0.0016512771,0.012682334,0.00004223497,0.00008113055,0.0006481033,0.0001486376,0.0008754683,0.9677904,0.00015325689,0.015738597,0.000028250113],"about_ca_topic_score_codex":0.00047236023,"about_ca_topic_score_gemma":0.00092962355,"teacher_disagreement_score":0.0029492823,"about_ca_system_score_codex":0.00047130688,"about_ca_system_score_gemma":0.00035435156,"threshold_uncertainty_score":0.009866297},"labels":[],"label_agreement":null},{"id":"W3176234498","doi":"10.1096/fasebj.27.1_supplement.1128.5","title":"Crosstalk between Toll‐like Receptor 4 and Interleukin 10 in Cardiomyocyte Survival","year":2013,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital","funders":"Canadian Institutes of Health Research","keywords":"IRF3; TLR4; Interferon regulatory factors; Cell biology; Toll-like receptor; Receptor; Phosphorylation; Signal transduction; Crosstalk; Tumor necrosis factor alpha; Biology; Innate immune system; Chemistry; Immunology; Biochemistry","score_opus":0.012915626287051953,"score_gpt":0.22986775284812855,"score_spread":0.2169521265610766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176234498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97453815,0.016119253,0.0043073515,0.00061938254,0.00020690593,0.000046543864,0.00022800406,0.00005175352,0.003882684],"genre_scores_gemma":[0.9891874,0.004891586,0.002172867,0.00027539046,0.00008561257,0.000064964355,0.00013004617,0.000005543873,0.0031866268],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979335,0.00006881216,0.00001543717,0.000023522694,0.0000263039,0.00007254232],"domain_scores_gemma":[0.99990857,0.000017062994,0.000031641648,0.0000060303855,0.000011550631,0.000025127183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002301661,0.00027956947,0.00015465272,0.00014702618,0.00010055327,0.00021477182,0.000115255374,0.0002305564,0.00205158],"category_scores_gemma":[0.00011202026,0.00008861097,0.00027842354,0.000057247777,0.00016055729,0.00020849529,0.000283031,0.00042451074,0.00033952703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064434414,0.00007679527,0.0011165092,0.00021770956,0.00001862775,0.00037453717,0.00003052582,0.00012099647,0.9898435,0.00032400538,0.00012761458,0.00710482],"study_design_scores_gemma":[0.00016859255,0.0028927769,0.06032578,0.00009930024,0.0001532645,0.0013123861,0.0002661262,0.0019844354,0.9211385,0.0011150882,0.010520112,0.00002360698],"about_ca_topic_score_codex":0.00012185754,"about_ca_topic_score_gemma":0.0002546828,"teacher_disagreement_score":0.00205158,"about_ca_system_score_codex":0.00016700449,"about_ca_system_score_gemma":0.00017475167,"threshold_uncertainty_score":0.0068632364},"labels":[],"label_agreement":null},{"id":"W3176507138","doi":"10.1096/fasebj.20.4.a204","title":"CpG motifs in bacterial DNA evokes peroxynitrite signaling in human neutrophils","year":2006,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research","keywords":"Peroxynitrite; CpG site; DNA methylation; Molecular biology; DNA; Chemistry; CpG Oligodeoxynucleotide; Biology; Cell biology; Gene expression; Superoxide; Gene; Biochemistry; Enzyme","score_opus":0.009743425375138198,"score_gpt":0.22205610981955679,"score_spread":0.2123126844444186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176507138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967249,0.0013113914,0.001134255,0.00005600303,0.000023214703,0.000041433017,0.00013211083,0.00001572794,0.00056107005],"genre_scores_gemma":[0.9958305,0.0006922106,0.0012434004,0.00010734171,0.000014364763,0.00006680621,0.000541399,0.000005426649,0.0014985161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985135,0.00004781507,0.000009478175,0.000022484113,0.000031837128,0.00003702665],"domain_scores_gemma":[0.9999534,0.000013345976,0.000010707116,0.0000048956886,0.0000067668116,0.00001088351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017695678,0.00030417624,0.00018391728,0.00008593958,0.000063032516,0.00013376179,0.000087919776,0.0003133003,0.0013142914],"category_scores_gemma":[0.00018073006,0.0001172686,0.00014446772,0.00007067862,0.00010118974,0.00008141833,0.0001591128,0.0002513835,0.00036001176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025432627,0.000030866726,0.00021406678,0.00003824487,0.0000036035494,0.00006095935,0.000018132085,0.000021735625,0.99831355,0.000022030588,0.000019945084,0.0010025051],"study_design_scores_gemma":[0.00007485388,0.0017057254,0.013538824,0.0000256127,0.000027641134,0.0005763504,0.00006632901,0.0007633989,0.9810463,0.00007070498,0.0020983564,0.000005970305],"about_ca_topic_score_codex":0.00037256666,"about_ca_topic_score_gemma":0.00045369423,"teacher_disagreement_score":0.0013142914,"about_ca_system_score_codex":0.000119927936,"about_ca_system_score_gemma":0.00013254974,"threshold_uncertainty_score":0.0043967366},"labels":[],"label_agreement":null},{"id":"W3178186466","doi":"10.1038/s41556-021-00708-8","title":"E-type prostanoid receptor 4 drives resolution of intestinal inflammation by blocking epithelial necroptosis","year":2021,"lang":"en","type":"article","venue":"Nature Cell Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Children's Hospital; Centre for Drug Research and Development; Simon Fraser University","funders":"Crohn's and Colitis Canada; Deutsche Forschungsgemeinschaft","keywords":"Necroptosis; Cell biology; Inflammation; Biology; RIPK1; Signal transduction; Kinase; Programmed cell death; Tumor necrosis factor alpha; Receptor; Immunology; Apoptosis; Biochemistry","score_opus":0.004609610870061471,"score_gpt":0.22526028026446127,"score_spread":0.22065066939439978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3178186466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926852,0.0010791954,0.0022191822,0.00052929844,0.00017016535,0.000047444217,0.00033807725,0.00017841818,0.0027529548],"genre_scores_gemma":[0.9923348,0.0005511574,0.0021501507,0.00013465049,0.00003746848,0.000050535895,0.00030084827,0.000033428125,0.0044069597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999532,0.000095488205,0.000039521183,0.00006791298,0.0000806702,0.00018441853],"domain_scores_gemma":[0.9997515,0.000046238325,0.000064109416,0.000041585117,0.000015128257,0.000081450075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039369735,0.00037830288,0.00044782826,0.00029920213,0.00022125474,0.0006424546,0.00044470752,0.00069709204,0.0026894496],"category_scores_gemma":[0.00025336863,0.0003232426,0.0005151859,0.00015362976,0.00060718,0.00041897636,0.00028244226,0.0021704177,0.00071515027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013503314,0.00033441064,0.00016089111,0.00006597601,0.000011884196,0.00008568911,0.000022372473,0.0002594395,0.9948089,0.00040031326,0.00017807054,0.0023215897],"study_design_scores_gemma":[0.00025806986,0.0014241055,0.0026427035,0.000011026852,0.000026325331,0.0001897607,0.00009021498,0.0025481526,0.9899734,0.00020909382,0.0026188039,0.000008346636],"about_ca_topic_score_codex":0.00037849462,"about_ca_topic_score_gemma":0.0008086667,"teacher_disagreement_score":0.0026894496,"about_ca_system_score_codex":0.0005753491,"about_ca_system_score_gemma":0.0004983012,"threshold_uncertainty_score":0.008997083},"labels":[],"label_agreement":null},{"id":"W3179261078","doi":"10.1080/10253890.2021.1954905","title":"Endotoxin-induced cytokine, chemokine and white blood cell profiles of variable stress-responding sheep","year":2021,"lang":"en","type":"article","venue":"Stress","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canada First Research Excellence Fund; Mitacs","keywords":"Chemokine; Cytokine; Immunology; Medicine; Inflammation","score_opus":0.006956250884250239,"score_gpt":0.2123051340187848,"score_spread":0.2053488831345346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179261078","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997416,0.000063067215,0.0000790519,0.0000056639424,0.0000013888681,0.0000033763354,0.000051204282,0.0000010625064,0.000053495107],"genre_scores_gemma":[0.9990533,0.00011669759,0.00025361674,0.000024112613,0.000006530338,0.000025035994,0.00019800522,0.0000021416004,0.00032052153],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998373,0.000030647036,0.00001896839,0.00005332835,0.000024891875,0.000034822457],"domain_scores_gemma":[0.99969554,0.000045673936,0.00012260093,0.000023373374,0.00003940683,0.000073401105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016661813,0.0001739575,0.0003630214,0.00033419352,0.00014263396,0.00023503831,0.00009706929,0.00027379135,0.0004871963],"category_scores_gemma":[0.00046576263,0.0001365743,0.000118000644,0.00015065385,0.00025490313,0.00012857729,0.00016517391,0.00029959605,0.00017783006],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002636531,0.00020213751,0.14745644,0.00007531086,0.00003110261,0.00085767347,0.0009020453,0.00009762721,0.843437,0.00003232846,0.00008748794,0.004184346],"study_design_scores_gemma":[0.000015598504,0.0026930126,0.97572994,0.000013433997,0.00003579595,0.0011486665,0.0009064607,0.0003719538,0.018534807,0.00006176033,0.00047507285,0.000013467747],"about_ca_topic_score_codex":0.00048380735,"about_ca_topic_score_gemma":0.00065246725,"teacher_disagreement_score":0.0004871963,"about_ca_system_score_codex":0.00010159186,"about_ca_system_score_gemma":0.000066883804,"threshold_uncertainty_score":0.001629889},"labels":[],"label_agreement":null},{"id":"W3179580365","doi":"10.1186/s12936-021-03836-6","title":"Toll-like receptor 9 and 4 gene polymorphisms in susceptibility and severity of malaria: a meta-analysis of genetic association studies","year":2021,"lang":"en","type":"review","venue":"Malaria Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Malaria; Meta-analysis; Medicine; Immunology; TLR9; Parasitology; Plasmodium falciparum; Allele; Public health; Internal medicine; Demography; Biology; Genetics; Pathology; Gene","score_opus":0.06516161743038978,"score_gpt":0.3225921263650665,"score_spread":0.2574305089346767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179580365","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14133766,0.8465095,0.006598251,0.0007655802,0.00063116086,0.00047250718,0.0028056263,0.0001580042,0.0007217349],"genre_scores_gemma":[0.90939766,0.08278841,0.004094561,0.0004953245,0.000303653,0.00072114315,0.0016946179,0.00007334925,0.0004313681],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.97744113,0.013461198,0.0038877432,0.003242707,0.001348801,0.00061841187],"domain_scores_gemma":[0.95892483,0.03153513,0.0046763187,0.0024191842,0.0018584002,0.0005862214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02215406,0.00312183,0.01460969,0.0061109536,0.0010267905,0.003870273,0.0025852432,0.0024772696,0.0037239068],"category_scores_gemma":[0.029457476,0.0017076178,0.052531973,0.00953928,0.00076478417,0.001454871,0.0019609765,0.0025870833,0.00031109477],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035013712,0.00003371181,0.034052137,0.019860625,0.9380851,0.0002222043,0.000044257,0.00095994823,0.00033231333,0.00008939768,0.0002668665,0.0025519838],"study_design_scores_gemma":[0.00048031626,0.00019156956,0.014727816,0.0013424307,0.98162043,0.00010876099,0.00003522769,0.00081216864,0.0001230968,0.00020401052,0.00033549196,0.00001870536],"about_ca_topic_score_codex":0.0049458123,"about_ca_topic_score_gemma":0.005702297,"teacher_disagreement_score":0.02215406,"about_ca_system_score_codex":0.0014122912,"about_ca_system_score_gemma":0.0017436949,"threshold_uncertainty_score":0.1171633},"labels":[],"label_agreement":null},{"id":"W3180250675","doi":"10.3390/cells10071735","title":"Leukocytes in Inflammation, Resolution of Inflammation, Autoimmune Diseases and Cancer","year":2021,"lang":"en","type":"editorial","venue":"Cells","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Inflammation; Cancer; Medicine; Autoimmune disease; Immunology; Internal medicine; Antibody","score_opus":0.005345127959181792,"score_gpt":0.23302209507888516,"score_spread":0.22767696711970337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180250675","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000029825771,0.04968755,0.0001103128,0.03671616,0.9118736,0.000013230626,0.000039607614,0.0000442641,0.0014855315],"genre_scores_gemma":[0.00036576454,0.023989754,0.00007473282,0.018105619,0.9514748,0.00001366813,0.000022982116,0.000021510987,0.0059311865],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99538785,0.0013877072,0.00044383045,0.00044605584,0.0020579132,0.00027668173],"domain_scores_gemma":[0.9862299,0.007624235,0.0006436158,0.00031645305,0.0032313014,0.001954547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0071905977,0.004250167,0.0040647737,0.0026173198,0.0029769384,0.0071305544,0.003784877,0.0118878195,0.008266597],"category_scores_gemma":[0.015664443,0.0013867333,0.0019328881,0.0014833495,0.0035519523,0.006396837,0.0022903539,0.026137115,0.008869016],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052331245,0.000008456449,0.000014810623,0.0002761749,0.00001593631,0.00005945309,0.00001583351,0.0000179753,0.000048441896,0.00070361793,0.9913298,0.0074572098],"study_design_scores_gemma":[0.000060964543,0.00005487795,0.00017399194,0.0005780013,0.0000404439,0.00024509104,0.000045452874,0.00008704239,0.000070426184,0.0025128555,0.9961111,0.000019845702],"about_ca_topic_score_codex":0.0021325885,"about_ca_topic_score_gemma":0.005892038,"teacher_disagreement_score":0.0118878195,"about_ca_system_score_codex":0.0030594233,"about_ca_system_score_gemma":0.0031991908,"threshold_uncertainty_score":0.038028},"labels":[],"label_agreement":null},{"id":"W3183637498","doi":"10.7150/thno.62256","title":"Twist1 contributes to developing and sustaining corticosteroid resistance in ulcerative colitis","year":2021,"lang":"en","type":"article","venue":"Theranostics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Ulcerative colitis; Colitis; Inflammation; STAT protein; Inflammatory bowel disease; STAT3; Corticosteroid; Glucocorticoid receptor; Glucocorticoid; Medicine; Activator (genetics); Apoptosis; Immunology; Receptor; Chemistry; Cancer research; Internal medicine","score_opus":0.011634937648096267,"score_gpt":0.24818629869756134,"score_spread":0.2365513610494651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3183637498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97271943,0.022297284,0.0016130944,0.0007437159,0.00008004179,0.00004994891,0.00035319442,0.0001156076,0.0020277395],"genre_scores_gemma":[0.99427855,0.004050233,0.0003459852,0.000100591984,0.00003804016,0.000017597082,0.00014308776,0.0000055820224,0.0010203192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998884,0.000021961196,0.000009887005,0.000023703902,0.000018765355,0.000037301535],"domain_scores_gemma":[0.99977833,0.000018869789,0.00011895121,0.000010673609,0.000014347317,0.000058928603],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014969858,0.0004065502,0.00023638946,0.00026747287,0.00025156906,0.0003420884,0.00019403343,0.00038428366,0.0018948591],"category_scores_gemma":[0.00021113857,0.00012146392,0.00022481279,0.0001957413,0.00040654792,0.0001813031,0.0002674619,0.0005581367,0.00028137257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0037375353,0.00018801549,0.05601194,0.0015116008,0.00010715405,0.004327223,0.00022878284,0.0005646764,0.8871845,0.0016692649,0.0020179562,0.042451285],"study_design_scores_gemma":[0.00044036136,0.0039435136,0.6104483,0.00046504202,0.00062663585,0.026235973,0.0012719976,0.0050290567,0.30349925,0.0025066198,0.04542543,0.00010798479],"about_ca_topic_score_codex":0.00034470612,"about_ca_topic_score_gemma":0.00044013173,"teacher_disagreement_score":0.0018948591,"about_ca_system_score_codex":0.00026942597,"about_ca_system_score_gemma":0.00022497532,"threshold_uncertainty_score":0.006338954},"labels":[],"label_agreement":null},{"id":"W3187259447","doi":"10.21769/bioprotoc.3937","title":"Live Intravital Intestine with Blood Flow Visualization in Neonatal Mice Using Two-photon Laser Scanning Microscopy","year":2021,"lang":"en","type":"article","venue":"BIO-PROTOCOL","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Heart and Stroke Foundation; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children; Natural Sciences and Engineering Research Council of Canada; Heart and Stroke Foundation of Canada","keywords":"Intravital microscopy; Microcirculation; Two-photon excitation microscopy; Blood flow; Small intestine; Microscopy; Pathology; Visualization; Biology; Live cell imaging; Anatomy; Medicine; Computer science; Optics; Cell; Radiology; Physics; Artificial intelligence; Endocrinology; Biochemistry","score_opus":0.012149212056981783,"score_gpt":0.3021892484178826,"score_spread":0.2900400363609008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3187259447","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4627649,0.005336381,0.5048561,0.00088424975,0.00042188272,0.0022503599,0.0048222058,0.0035124086,0.015151489],"genre_scores_gemma":[0.39224753,0.0061834743,0.5646018,0.0006018215,0.000079825884,0.007710422,0.0030686616,0.0006195691,0.024886997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997106,0.000039524366,0.000024216652,0.00008543404,0.00008346793,0.000056754103],"domain_scores_gemma":[0.99973434,0.00005774017,0.00007050058,0.00005335038,0.00003936032,0.000044729728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006707336,0.00082533504,0.0003071141,0.0007760777,0.00048032423,0.00035119645,0.0008548631,0.00086050294,0.0036684636],"category_scores_gemma":[0.0002438319,0.000493593,0.0004735662,0.0002511602,0.00047574998,0.0004870872,0.0005810955,0.0017103121,0.0010215169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075050935,0.000041157316,0.000096110416,0.000068024696,0.0000035641403,0.00007142537,0.000031462474,0.0001036956,0.9960924,0.00058510597,0.00016341887,0.0026685297],"study_design_scores_gemma":[0.000027579077,0.0003376429,0.0019443884,0.000039936243,0.000018001345,0.00037640377,0.000025520709,0.0017544687,0.98386765,0.000254204,0.011338251,0.000016094053],"about_ca_topic_score_codex":0.00083835516,"about_ca_topic_score_gemma":0.0018443378,"teacher_disagreement_score":0.0036684636,"about_ca_system_score_codex":0.00050221843,"about_ca_system_score_gemma":0.0006961962,"threshold_uncertainty_score":0.012272239},"labels":[],"label_agreement":null},{"id":"W3192590880","doi":"10.1128/msystems.00306-21","title":"Species-Specific Endotoxin Stimulus Determines Toll-Like Receptor 4- and Caspase 11-Mediated Pathway Activation Characteristics","year":2021,"lang":"en","type":"article","venue":"mSystems","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Genome Canada; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; American Association of Pharmaceutical Scientists","keywords":"Stimulus (psychology); Toll-like receptor; Receptor; Cell biology; Toll; Chemistry; Communication; Biology; Neuroscience; Innate immune system; Immunology; Psychology; Genetics; Cognitive psychology","score_opus":0.01452351191918708,"score_gpt":0.20497328349391464,"score_spread":0.19044977157472756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3192590880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9930143,0.0017236163,0.0019719978,0.00014312733,0.00008163685,0.000035801284,0.0006664315,0.000047955,0.002315211],"genre_scores_gemma":[0.99421436,0.00060250715,0.0013508139,0.00007071797,0.00001558849,0.000047657264,0.0009828819,0.000012990657,0.0027025286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997646,0.000029876657,0.000022508722,0.000052536074,0.000036639383,0.000093888455],"domain_scores_gemma":[0.999821,0.000022426382,0.000043434437,0.000017468285,0.000024213115,0.00007153975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001268063,0.00017083646,0.00016272724,0.00023186188,0.00011746457,0.00031723344,0.00009984335,0.00025865147,0.004821908],"category_scores_gemma":[0.00021552958,0.00009475203,0.00024696242,0.00011866117,0.00017217349,0.0002915026,0.00018639311,0.0005989667,0.00095849636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038890034,0.00003854739,0.0005264517,0.000039282335,0.0000028881386,0.00006978553,0.000021135002,0.000013609861,0.99778783,0.00011353482,0.00006266629,0.00093527604],"study_design_scores_gemma":[0.000048625876,0.00074078003,0.074577615,0.000025897763,0.000016990065,0.0015320538,0.0002361134,0.0007655584,0.91636413,0.00038553588,0.0052911937,0.000015437678],"about_ca_topic_score_codex":0.00008792423,"about_ca_topic_score_gemma":0.00014868144,"teacher_disagreement_score":0.004821908,"about_ca_system_score_codex":0.0001821638,"about_ca_system_score_gemma":0.00016817164,"threshold_uncertainty_score":0.016130865},"labels":[],"label_agreement":null},{"id":"W3195341422","doi":"10.1159/000518230","title":"Endotoxemia in Critically Ill Patients with COVID-19","year":2021,"lang":"en","type":"article","venue":"Blood Purification","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iridian Spectral Technologies (Canada)","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health; Stony Brook University; U.S. Department of Veterans Affairs","keywords":"Critically ill; Coronavirus disease 2019 (COVID-19); Medicine; Intensive care medicine; 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Critical illness; Pandemic; Virology; Internal medicine; Disease; Outbreak; Infectious disease (medical specialty)","score_opus":0.008723594916142906,"score_gpt":0.23251850162871,"score_spread":0.22379490671256708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195341422","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99923337,0.00033548093,0.0000374311,0.000042979063,0.000005828739,0.00001217776,0.0000822135,0.0000014922275,0.00024912893],"genre_scores_gemma":[0.9995334,0.0001231228,0.000057491332,0.00004884142,0.000021283442,0.000009983486,0.00015347551,4.183201e-7,0.000051775936],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996773,0.000075768505,0.000046982335,0.000060290913,0.00006448752,0.00007519939],"domain_scores_gemma":[0.9992353,0.00008880179,0.00041353205,0.000027032389,0.00006212338,0.00017319027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045406047,0.00022607303,0.00041006418,0.00033687972,0.00044483342,0.0004853961,0.00016647315,0.0003549449,0.0015090305],"category_scores_gemma":[0.0011810034,0.00018783538,0.00021348578,0.0004148477,0.00023721783,0.0004201963,0.00041216565,0.00058735313,0.00017128664],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009746348,0.000034421144,0.9986084,0.000011981532,0.000008577486,0.00024129623,0.000039075414,0.0000065998024,0.0003377929,0.000007818653,0.00004509776,0.00056156534],"study_design_scores_gemma":[0.000009989707,0.0003131352,0.99770325,0.000014616951,0.000008372784,0.0015051088,0.00015796912,0.000070209964,0.00007910657,0.000015170813,0.00012070067,0.000002345169],"about_ca_topic_score_codex":0.00065154326,"about_ca_topic_score_gemma":0.0008284177,"teacher_disagreement_score":0.0015090305,"about_ca_system_score_codex":0.00023237069,"about_ca_system_score_gemma":0.00029843525,"threshold_uncertainty_score":0.0050482154},"labels":[],"label_agreement":null},{"id":"W3196009884","doi":"10.1038/s41467-021-24982-0","title":"Listeria exploits IFITM3 to suppress antibacterial activity in phagocytes","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; University Health Network; University of Calgary; Princess Margaret Cancer Centre; Hospital for Sick Children","funders":"Office of Extramural Research, National Institutes of Health; National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; U.S. Department of Health and Human Services; Government of Canada; Hospital for Sick Children; Ontario Innovation Trust; Scheme for Promotion of Academic and Research Collaboration","keywords":"Phagosome; Listeria monocytogenes; Intracellular parasite; Microbiology; Biology; Interferon; Immune system; Listeria; Cell biology; Intracellular; Virulence; Signal transduction; Transmembrane protein; Immunology; Bacteria; Gene; Receptor","score_opus":0.023276155339059103,"score_gpt":0.30727552477358394,"score_spread":0.28399936943452486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196009884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99267864,0.0014060846,0.0030792991,0.00041022548,0.000082955,0.000030725507,0.0005511739,0.00020362358,0.0015573537],"genre_scores_gemma":[0.99641454,0.00023058352,0.0016874878,0.00015412881,0.000011531286,0.000026720454,0.00039705087,0.000028346316,0.0010496923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998872,0.000019435562,0.0000119125325,0.000019916319,0.000022876218,0.00003862768],"domain_scores_gemma":[0.999892,0.00001542898,0.00004276127,0.000014023642,0.000008733799,0.000027046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001523106,0.00028328772,0.00022972279,0.00011111968,0.00014984269,0.00020748645,0.00019921712,0.00034957088,0.0010560579],"category_scores_gemma":[0.000097329095,0.00008341311,0.00029397593,0.000076732234,0.00025608626,0.00011578357,0.00016204442,0.0006692108,0.00033651397],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016405091,0.000018104318,0.00010475533,0.00001898281,0.000002934805,0.000051831397,0.0000039843712,0.000041035222,0.9988269,0.00008162019,0.00005222058,0.0006334459],"study_design_scores_gemma":[0.000055266995,0.00040389455,0.002212641,0.0000076027163,0.000010109494,0.0004973062,0.000017444481,0.0008465298,0.9935868,0.0001015048,0.0022565539,0.0000042832016],"about_ca_topic_score_codex":0.00028269066,"about_ca_topic_score_gemma":0.00028938922,"teacher_disagreement_score":0.0010560579,"about_ca_system_score_codex":0.00028357256,"about_ca_system_score_gemma":0.00023291411,"threshold_uncertainty_score":0.003532827},"labels":[],"label_agreement":null},{"id":"W3196086765","doi":"10.1101/2021.08.23.457326","title":"Single Nucleotide Polymorphisms in the Bovine TLR2 Extracellular Domain Contribute to Breed and Species-Specific Innate Immune Functionality","year":2021,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Biology; TLR2; Single-nucleotide polymorphism; Innate immune system; Antigen; SNP; Genetics; Immune system; Gene; Genotype; Microbiology","score_opus":0.014016022308882055,"score_gpt":0.1979231014676182,"score_spread":0.18390707915873616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196086765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989015,0.0002761187,0.00040281567,0.000028800005,0.000004082501,0.0000033336646,0.00015326137,0.000005548459,0.00022461565],"genre_scores_gemma":[0.9990922,0.00007251198,0.00029524363,0.000032308235,0.0000065325357,0.00000562271,0.00027647364,0.0000045593883,0.00021451958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997223,0.000086474116,0.000026633272,0.00007411372,0.00004570235,0.000044874072],"domain_scores_gemma":[0.9997451,0.00007993955,0.00010176583,0.000019774881,0.000016966245,0.000036453526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031349776,0.00019940261,0.00017071042,0.0003454262,0.000121387144,0.00024817188,0.00012852825,0.00026786947,0.0016781746],"category_scores_gemma":[0.000294267,0.00010575127,0.0001986299,0.0002465796,0.00014613167,0.00007690739,0.00016187284,0.0002293562,0.0002604587],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015708011,0.000094427334,0.122417636,0.00008150865,0.00011718902,0.00057915895,0.00020199535,0.00013456921,0.8681452,0.00009665748,0.00011924867,0.0064416113],"study_design_scores_gemma":[0.00004148336,0.00032227003,0.9613875,0.000018124398,0.00010847067,0.0020689317,0.00014246783,0.00071822945,0.03312399,0.000089968744,0.0019668792,0.000011566717],"about_ca_topic_score_codex":0.00061774324,"about_ca_topic_score_gemma":0.0009324076,"teacher_disagreement_score":0.0016781746,"about_ca_system_score_codex":0.00012470687,"about_ca_system_score_gemma":0.000075494594,"threshold_uncertainty_score":0.0056140423},"labels":[],"label_agreement":null},{"id":"W3199786667","doi":"10.1016/j.envint.2021.106779","title":"Establishment of baseline cytology metrics in nestling American kestrels (Falco sparverius): Immunomodulatory effects of the flame retardant isopropylated triarylphosphate isomers","year":2021,"lang":"en","type":"article","venue":"Environment International","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"U.S. Geological Survey; Environment and Climate Change Canada","keywords":"Immune system; Flow cytometry; Antibody; Receptor; Biology; Immunofluorescence; Molecular biology; Zoology; Andrology; Internal medicine; Immunology; Medicine; Biochemistry","score_opus":0.00468619051165123,"score_gpt":0.20106617191841764,"score_spread":0.1963799814067664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199786667","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99937266,0.0001250466,0.0001480738,0.000008448034,0.0000031922418,0.000013371876,0.000115924035,0.0000043405166,0.00020900622],"genre_scores_gemma":[0.99764735,0.0001226598,0.000504009,0.000034835604,0.0000033477422,0.00004463018,0.00031180176,0.0000041744183,0.0013271044],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99991393,0.000008477878,0.000006474243,0.00003874109,0.000016028995,0.000016439122],"domain_scores_gemma":[0.9997936,0.000015281965,0.000063172585,0.000012654257,0.000045975386,0.00006927751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009878099,0.0002176606,0.00016153301,0.00026723658,0.00020386327,0.00021696834,0.0001305357,0.00029890993,0.0008361855],"category_scores_gemma":[0.00014904341,0.00014201281,0.00016168588,0.000076507844,0.00024839464,0.00024165155,0.00012452732,0.0004369481,0.00019596354],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071407005,0.00014103392,0.027053662,0.000027767968,0.000009375797,0.000058733065,0.00010946881,0.000036289242,0.9695035,0.000012814964,0.000028353583,0.0023049058],"study_design_scores_gemma":[0.000022555736,0.0046071224,0.7673637,0.000010135494,0.000037000136,0.00027095553,0.0004932159,0.0002754271,0.22618367,0.00001938246,0.0007050342,0.000011775109],"about_ca_topic_score_codex":0.0021125646,"about_ca_topic_score_gemma":0.006718202,"teacher_disagreement_score":0.0021125646,"about_ca_system_score_codex":0.00028821983,"about_ca_system_score_gemma":0.00014681465,"threshold_uncertainty_score":0.004200518},"labels":[],"label_agreement":null},{"id":"W3201181612","doi":"10.1016/j.celrep.2021.109691","title":"Metabolic endotoxemia is dictated by the type of lipopolysaccharide","year":2021,"lang":"en","type":"article","venue":"Cell Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Lipopolysaccharide; Biology; Chemistry; Computational biology; Immunology","score_opus":0.01002837110859796,"score_gpt":0.23403046258792928,"score_spread":0.2240020914793313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201181612","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98270226,0.0052385465,0.0068463995,0.00056414265,0.0001832139,0.00006181968,0.0003115548,0.000077860255,0.0040141186],"genre_scores_gemma":[0.9920887,0.0030073668,0.0028266674,0.00024247143,0.00008421721,0.00005245328,0.00025038957,0.000016149992,0.0014315587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970216,0.00007235055,0.000030749776,0.00005366391,0.00007620571,0.000064920525],"domain_scores_gemma":[0.9997825,0.000018372639,0.000084189145,0.000022672471,0.000024444053,0.000067842084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026307977,0.00035188466,0.00029570807,0.00021549672,0.00017184824,0.00045085335,0.00013373041,0.0002972633,0.0009554019],"category_scores_gemma":[0.0001872319,0.00012385444,0.0002079963,0.00016722376,0.00032825017,0.00029182096,0.0003526626,0.00061589904,0.00024149904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045098455,0.000028428054,0.001581509,0.000049262446,0.000005970436,0.00015589215,0.000015943331,0.000027810172,0.99503976,0.00035278944,0.00006319111,0.0022285501],"study_design_scores_gemma":[0.00009667588,0.0022295555,0.13626505,0.00009876689,0.000069204296,0.003689263,0.00033410688,0.001165824,0.8425582,0.0018918989,0.011551916,0.00004953332],"about_ca_topic_score_codex":0.00007696183,"about_ca_topic_score_gemma":0.00009648173,"teacher_disagreement_score":0.0009554019,"about_ca_system_score_codex":0.00019416427,"about_ca_system_score_gemma":0.00018401147,"threshold_uncertainty_score":0.0031961203},"labels":[],"label_agreement":null},{"id":"W3202414391","doi":"10.1016/j.ijbiomac.2021.10.014","title":"The crosstalk between pattern-recognition receptor signaling and calcium signaling","year":2021,"lang":"en","type":"review","venue":"International Journal of Biological Macromolecules","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Priority Academic Program Development of Jiangsu Higher Education Institutions","keywords":"Crosstalk; Pattern recognition receptor; Signal transduction; Innate immune system; Biology; Receptor; Cell biology; Immune system; Calcium signaling; Cell signaling; Immunology; Biochemistry","score_opus":0.07655949505771723,"score_gpt":0.3414262603236067,"score_spread":0.2648667652658895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202414391","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005488478,0.9983398,0.00014203835,0.0003268535,0.0005008003,0.0000021548058,0.000010093108,0.0000056629847,0.0006177786],"genre_scores_gemma":[0.00046039544,0.9979101,0.0001557185,0.00024216014,0.00064729375,0.000004334107,0.000023102375,0.0000010617458,0.00055582594],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976856,0.000032912943,0.000032975087,0.00005215608,0.00008509413,0.000028213935],"domain_scores_gemma":[0.9995963,0.00016611825,0.00006297889,0.000013789263,0.000103900216,0.000056874447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083881983,0.0013822096,0.0015462303,0.0018998557,0.000317566,0.0017808498,0.0012675836,0.0019102751,0.0031825714],"category_scores_gemma":[0.00074978796,0.000398174,0.00039691236,0.0028125527,0.00083966594,0.0020869928,0.0011689856,0.0025997297,0.0029870605],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017722273,0.00007881495,0.00018297293,0.011686877,0.000073234165,0.00027045773,0.000045121364,0.00044816,0.0046895333,0.007396372,0.046080172,0.928871],"study_design_scores_gemma":[0.000024811998,0.00007825217,0.00064724666,0.0018377182,0.00007572874,0.0008237248,0.000052255495,0.0001394445,0.00078969466,0.0038682222,0.99164283,0.000020092448],"about_ca_topic_score_codex":0.00067111506,"about_ca_topic_score_gemma":0.0012867919,"teacher_disagreement_score":0.0031825714,"about_ca_system_score_codex":0.0008993252,"about_ca_system_score_gemma":0.0011846506,"threshold_uncertainty_score":0.010646701},"labels":[],"label_agreement":null},{"id":"W3203537677","doi":"10.3389/fimmu.2021.725063","title":"Isolation of Skin Leukocytes Uncovers Phagocyte Inflammatory Responses During Induction and Resolution of Cutaneous Inflammation in Fish","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Inflammation; Phagocyte; Chemokine; Immunology; Immune system; Biology; Proinflammatory cytokine","score_opus":0.005719170841321276,"score_gpt":0.20541462744556976,"score_spread":0.19969545660424848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203537677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938081,0.0015890875,0.0034181261,0.00008493035,0.000029907444,0.00007856174,0.00023144152,0.000030092493,0.0007297776],"genre_scores_gemma":[0.99202627,0.0009291406,0.004755213,0.0001396323,0.00002012051,0.00010887982,0.00030938687,0.000015680153,0.0016957304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998197,0.000021342981,0.000017434426,0.00005519785,0.000033939636,0.000052419105],"domain_scores_gemma":[0.9999312,0.000011191196,0.000016437853,0.000009010834,0.000011049891,0.000021004194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021221513,0.000253437,0.00029512448,0.000276522,0.00022384194,0.00029564407,0.00012346308,0.00032665403,0.0007768073],"category_scores_gemma":[0.00014679015,0.00015232687,0.0002659431,0.00010746182,0.00036020094,0.00028648647,0.00032045957,0.0006517675,0.00026403865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011023233,0.000011116192,0.00076676277,0.000048666134,0.0000024923413,0.00004416121,0.000040520667,0.000015738762,0.99807215,0.0000203255,0.000009979534,0.0008579243],"study_design_scores_gemma":[0.00002546956,0.0010329708,0.08427143,0.000030453233,0.000038778933,0.00048496437,0.00039822978,0.0006835785,0.9106314,0.00015044601,0.0022354438,0.000016823022],"about_ca_topic_score_codex":0.00046687055,"about_ca_topic_score_gemma":0.0009900447,"teacher_disagreement_score":0.0007768073,"about_ca_system_score_codex":0.00019570808,"about_ca_system_score_gemma":0.00022930307,"threshold_uncertainty_score":0.0025986433},"labels":[],"label_agreement":null},{"id":"W3205367390","doi":"10.1016/j.molimm.2021.10.003","title":"Pre-treatment with chicken IL-17A secreted by bioengineered LAB vector protects chicken embryo fibroblasts against Influenza Type A Virus (IAV) infection","year":2021,"lang":"en","type":"article","venue":"Molecular Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Indian Institute of Science Education and Research Kolkata; Department of Biotechnology, Ministry of Science and Technology, India","keywords":"Biology; Lactococcus lactis; Immune system; Virus; Influenza A virus subtype H5N1; Influenza A virus; Interferon; Virology; Viral replication; Microbiology; Immunology; Bacteria; Genetics; Lactic acid","score_opus":0.005430119469060967,"score_gpt":0.21519593528108802,"score_spread":0.20976581581202705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3205367390","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99465984,0.0011999002,0.0017095706,0.00011984414,0.00020886425,0.000045355417,0.0007315547,0.00007663371,0.0012484926],"genre_scores_gemma":[0.9890655,0.00063845096,0.0028639361,0.000089936635,0.000045618548,0.00006993853,0.0015365523,0.000018942535,0.0056710024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998118,0.00002609142,0.000027899503,0.000035842397,0.000039030198,0.000059368256],"domain_scores_gemma":[0.9998679,0.000034478002,0.000023401313,0.00002260131,0.000016116577,0.00003558287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017887952,0.0003541469,0.00031381086,0.00024203706,0.00016537186,0.0003087193,0.0001762507,0.00029856613,0.0015355963],"category_scores_gemma":[0.00011382839,0.0001260557,0.0003372763,0.000121363766,0.00020654591,0.00014927083,0.00015527422,0.0007210146,0.00050188275],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022232882,0.00007308875,0.00016273961,0.000026845262,0.000003747949,0.000035609944,0.000016081332,0.000027574186,0.9986582,0.000030595806,0.000044908935,0.0006983718],"study_design_scores_gemma":[0.000018204544,0.0005400298,0.002199275,0.000004866887,0.000013969894,0.0000861104,0.000034029283,0.0002726782,0.9953864,0.000010392459,0.0014310437,0.0000030965334],"about_ca_topic_score_codex":0.0012175025,"about_ca_topic_score_gemma":0.0015631268,"teacher_disagreement_score":0.0015355963,"about_ca_system_score_codex":0.00018496207,"about_ca_system_score_gemma":0.00027528385,"threshold_uncertainty_score":0.005137086},"labels":[],"label_agreement":null},{"id":"W3211537661","doi":"10.1002/jcp.30640","title":"Citral alleviates peptidoglycan‐induced inflammation and disruption of barrier functions in porcine intestinal epithelial cells","year":2021,"lang":"en","type":"article","venue":"Journal of Cellular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Manitoba","funders":"Canada Foundation for Innovation","keywords":"Peptidoglycan; Citral; Inflammation; TLR2; Microbiology; Immune system; Innate immune system; Staphylococcus aureus; Lipoteichoic acid; Biology; Barrier function; Bacillus subtilis; Chemistry; Cell biology; Biochemistry; Immunology; Enzyme; Bacteria; Food science","score_opus":0.009357431507744086,"score_gpt":0.22068893229912248,"score_spread":0.21133150079137838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3211537661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931443,0.00449622,0.0007672443,0.00017547252,0.00006336669,0.000039130333,0.00024363972,0.00005354954,0.0010172627],"genre_scores_gemma":[0.99442554,0.0020841097,0.0013476417,0.00022349192,0.000020510013,0.000032871507,0.0003757223,0.000013735225,0.0014763107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997874,0.0000541213,0.00002996271,0.000031354208,0.000048182137,0.00004908486],"domain_scores_gemma":[0.9998623,0.00001854087,0.000037614376,0.000016183576,0.000017236036,0.00004799981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023067601,0.00061954366,0.0005893585,0.0003271555,0.00017311625,0.00039147955,0.00024981156,0.00044991248,0.0007206646],"category_scores_gemma":[0.00016623871,0.00017394772,0.00054859923,0.0001737902,0.00032288345,0.00049348833,0.00039897894,0.00091741874,0.00012533202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011338688,0.00026079005,0.00028920756,0.0003617236,0.000017999319,0.00014593323,0.000056335244,0.000099262754,0.99520504,0.000052080864,0.00007021198,0.002307585],"study_design_scores_gemma":[0.00018663917,0.0065789754,0.015395927,0.00006977829,0.00009035331,0.000405219,0.00033395737,0.0013742218,0.9699443,0.0001083883,0.0054771854,0.00003519551],"about_ca_topic_score_codex":0.00063761405,"about_ca_topic_score_gemma":0.0012523225,"teacher_disagreement_score":0.0007206646,"about_ca_system_score_codex":0.00021839693,"about_ca_system_score_gemma":0.00027665807,"threshold_uncertainty_score":0.002410829},"labels":[],"label_agreement":null},{"id":"W3216852367","doi":"10.21037/tcr-21-1508","title":"Association between single nucleotide polymorphisms of IL-6 and susceptibility to skin cancer: a meta-analysis and systematic review","year":2021,"lang":"en","type":"article","venue":"Translational Cancer Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Meta-analysis; Odds ratio; Single-nucleotide polymorphism; Confidence interval; Internal medicine; Medicine; Publication bias; Oncology; Gastroenterology; Genotype; Biology; Genetics; Gene","score_opus":0.10063900004307619,"score_gpt":0.3788537661111253,"score_spread":0.2782147660680491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3216852367","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0051627425,0.9929389,0.0005151689,0.00019153801,0.000115218165,0.00029781047,0.00059804757,0.000019836985,0.0001606619],"genre_scores_gemma":[0.12807795,0.8655499,0.002642726,0.00055270613,0.00028464475,0.0015496816,0.0010254333,0.000022942026,0.00029395914],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99363446,0.0026467352,0.0019690674,0.00073861796,0.0007314274,0.00027965612],"domain_scores_gemma":[0.9836813,0.012168882,0.002480606,0.00042173252,0.0010327286,0.00021474488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009144175,0.0025849238,0.016558634,0.008388783,0.0006490175,0.0028652113,0.0019768688,0.002354354,0.0037733389],"category_scores_gemma":[0.02506661,0.0014023327,0.032081556,0.009528104,0.00057509606,0.0014386148,0.0012702317,0.0014892536,0.0003079312],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015624386,0.00003458333,0.0075032352,0.5042039,0.47434437,0.00022500411,0.00008560804,0.00046354224,0.0003165808,0.00012675308,0.00067743135,0.0104565],"study_design_scores_gemma":[0.0003218402,0.00016174841,0.005685435,0.03253996,0.9593062,0.00015928052,0.000044932705,0.0001742805,0.0001209438,0.00015296006,0.0013117774,0.000020628368],"about_ca_topic_score_codex":0.006088131,"about_ca_topic_score_gemma":0.012739986,"teacher_disagreement_score":0.016558634,"about_ca_system_score_codex":0.002107642,"about_ca_system_score_gemma":0.004391773,"threshold_uncertainty_score":0.048359573},"labels":[],"label_agreement":null},{"id":"W3217310573","doi":"10.1016/j.vaccine.2021.11.049","title":"Recombinant Bacillus subtilis flagellin Hag is a potent immunostimulant with reduced proinflammatory properties compared to Salmonella enterica serovar Typhimurium FljB","year":2021,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"PROTEO; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; International Development Research Centre; Université du Québec à Montréal","keywords":"Flagellin; TLR5; Proinflammatory cytokine; Salmonella enterica; Microbiology; Biology; Salmonella; Bacillus subtilis; Immune system; Immunology; Bacteria; Innate immune system; Toll-like receptor; Inflammation","score_opus":0.014258704356370739,"score_gpt":0.20951050598723267,"score_spread":0.19525180163086192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217310573","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809986,0.0006238834,0.00058484584,0.00006262996,0.000032175984,0.000010471248,0.00014792796,0.000035801095,0.00040239072],"genre_scores_gemma":[0.9965919,0.00028247686,0.0007812933,0.00003897435,0.000013967924,0.000009480473,0.0006274887,0.000010720021,0.0016436042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986744,0.000021360353,0.000008410926,0.000016229655,0.00004135086,0.00004514601],"domain_scores_gemma":[0.99988115,0.000019399702,0.000028775157,0.000009200444,0.000014640983,0.00004688216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018996812,0.0002778105,0.00028687625,0.00025063276,0.00011940179,0.00027148236,0.00017706073,0.00033139487,0.0012434479],"category_scores_gemma":[0.00014350706,0.00013229265,0.00020417881,0.00012530465,0.00021906971,0.00020832995,0.00018291292,0.0005894107,0.00026647202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096708466,0.00007204612,0.00010296417,0.000027266924,0.0000042072948,0.000023912244,0.000005373448,0.00005655466,0.9978224,0.000019515619,0.00002925113,0.0008694454],"study_design_scores_gemma":[0.00006067148,0.0016629591,0.0026335695,0.0000042081865,0.000015323132,0.00018116734,0.000023842913,0.0003147665,0.99414116,0.000022006972,0.00093487365,0.000005475002],"about_ca_topic_score_codex":0.0007144361,"about_ca_topic_score_gemma":0.0007938675,"teacher_disagreement_score":0.0012434479,"about_ca_system_score_codex":0.00020075249,"about_ca_system_score_gemma":0.00028570174,"threshold_uncertainty_score":0.0041597486},"labels":[],"label_agreement":null},{"id":"W39943429","doi":"10.1096/fasebj.23.1_supplement.741.7","title":"Mediators Released from LPS‐challenged Lungs into Circulation Induce the Inflammatory Response in Liver Vascular Endothelial Cells","year":2009,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lawson Health Research Institute","funders":"","keywords":"ARDS; Lung; Inflammation; Medicine; Immunology; Lipopolysaccharide; Pathology; Internal medicine","score_opus":0.008417576081427238,"score_gpt":0.21066096083284583,"score_spread":0.2022433847514186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W39943429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945117,0.0019583427,0.0022300063,0.00009736069,0.000044794266,0.00003054447,0.00022175584,0.000038615843,0.00086688297],"genre_scores_gemma":[0.99412906,0.0011871806,0.0017379607,0.00012300251,0.00003850763,0.00006719251,0.00049507816,0.000008392631,0.0022136474],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979013,0.00005254864,0.000023526723,0.000031881904,0.000041787447,0.000060119663],"domain_scores_gemma":[0.9999157,0.000013144362,0.000024885616,0.000010741996,0.000012007336,0.000023483723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020376687,0.00041741284,0.0002979292,0.0001955999,0.00012411986,0.00033360525,0.00009235021,0.0002879704,0.001729365],"category_scores_gemma":[0.000115505456,0.00016396659,0.0002735886,0.000118735654,0.00016722424,0.00029453644,0.00025497822,0.000737818,0.00040306713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018569721,0.000038679358,0.00023328017,0.000045177647,0.000004032392,0.00007853113,0.000013242805,0.00001628986,0.9987091,0.00003202087,0.000023281955,0.0006206635],"study_design_scores_gemma":[0.000056620393,0.00081489136,0.014987074,0.000015306727,0.00002218598,0.0003961758,0.0000842678,0.00070624024,0.9815201,0.00006306469,0.0013288306,0.000005174247],"about_ca_topic_score_codex":0.00012294474,"about_ca_topic_score_gemma":0.00018600182,"teacher_disagreement_score":0.001729365,"about_ca_system_score_codex":0.00013188066,"about_ca_system_score_gemma":0.0001245778,"threshold_uncertainty_score":0.0057852864},"labels":[],"label_agreement":null},{"id":"W41870505","doi":"10.1016/j.jaci.2009.07.016","title":"Innate immunity","year":2009,"lang":"en","type":"review","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":539,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia; Child and Family Research Institute","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Child Health Clinician Scientist Program","keywords":"Innate immune system; Immunity; Immune system; Immunology; Disease; Biology; Infectious disease (medical specialty); Acquired immune system; Medicine","score_opus":0.04861326506341126,"score_gpt":0.36480122513524627,"score_spread":0.31618796007183503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W41870505","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002367195,0.9820079,0.0016088093,0.0008418788,0.00551367,0.000034473192,0.000081963786,0.00006547829,0.00960915],"genre_scores_gemma":[0.0028132866,0.9648566,0.0014121953,0.001523064,0.0030772607,0.000057620146,0.00023256976,0.000009854863,0.026017558],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997551,0.000026501228,0.00003131656,0.00004662186,0.00010856025,0.000031910993],"domain_scores_gemma":[0.99985874,0.000029932688,0.00002038796,0.000013139816,0.00005499749,0.000022799444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036736534,0.00131117,0.001312662,0.0011279474,0.00034181392,0.001099983,0.0008625601,0.0011165715,0.009702867],"category_scores_gemma":[0.00045574576,0.00030135844,0.0003210479,0.0007928484,0.00057607645,0.0011272341,0.0012399087,0.0020739222,0.00930406],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010349727,0.00004061845,0.00008269041,0.0037483333,0.000027761525,0.00015727569,0.000024396406,0.000121560246,0.0066563324,0.0027520263,0.08484546,0.90144014],"study_design_scores_gemma":[0.000012543118,0.0000411393,0.00021851409,0.00066328765,0.000029516654,0.000872531,0.000014569792,0.000041324663,0.0012391737,0.0009996713,0.9958605,0.0000071534605],"about_ca_topic_score_codex":0.0003579884,"about_ca_topic_score_gemma":0.0009130851,"teacher_disagreement_score":0.009702867,"about_ca_system_score_codex":0.00051921303,"about_ca_system_score_gemma":0.001061672,"threshold_uncertainty_score":0.03245932},"labels":[],"label_agreement":null},{"id":"W4200025350","doi":"10.3791/2142-v","title":"Detection of Neu1 Sialidase Activity in Regulating TOLL-like Receptor Activation","year":2010,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Receptor; Sialidase; Cell biology; Signal transduction; Biology; Chemistry; Immunology; Biochemistry; Virus","score_opus":0.01757773123204235,"score_gpt":0.36479872715584827,"score_spread":0.3472209959238059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200025350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9507763,0.02369892,0.017548531,0.00020405863,0.0001462101,0.00011468133,0.00075518084,0.00013417992,0.0066219745],"genre_scores_gemma":[0.9792594,0.006892769,0.010644427,0.00011625486,0.000038995724,0.00006850388,0.00048199837,0.000018611265,0.0024791544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979335,0.000040088733,0.000012786811,0.000033659213,0.00006194456,0.00005816678],"domain_scores_gemma":[0.99990094,0.000020971214,0.000020900337,0.0000062613585,0.000023808594,0.000027095217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024217903,0.0005165686,0.00023768898,0.0004387458,0.00014291372,0.0004303058,0.00019066076,0.00045180734,0.0012388497],"category_scores_gemma":[0.0002831897,0.00017500129,0.0002755903,0.00028005472,0.00020697016,0.00037154232,0.00028358307,0.00043156097,0.0004584914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014394558,0.000010510218,0.0005732399,0.00008809445,0.0000048566676,0.000050980238,0.000014348062,0.000049730752,0.9969728,0.00009282965,0.00002240985,0.0019761485],"study_design_scores_gemma":[0.0000070816805,0.000113809605,0.0059571182,0.000015456651,0.000016281008,0.0002617158,0.000028497238,0.0012001378,0.9910062,0.00010988272,0.0012768318,0.0000069269486],"about_ca_topic_score_codex":0.0004479235,"about_ca_topic_score_gemma":0.0005832848,"teacher_disagreement_score":0.0012388497,"about_ca_system_score_codex":0.0003744183,"about_ca_system_score_gemma":0.0001827919,"threshold_uncertainty_score":0.0041443706},"labels":[],"label_agreement":null},{"id":"W4200101369","doi":"10.3390/immuno2010002","title":"Macrophages and Epithelial Cells Mutually Interact through NLRP3 to Clear Infection and Enhance the Gastrointestinal Barrier","year":2021,"lang":"en","type":"article","venue":"Immuno","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Inflammasome; Citrobacter rodentium; Secretion; Proinflammatory cytokine; Barrier function; Cell biology; Interleukin 22; Macrophage; Microbiology; Biology; Cytokine; Pathogen; Tight junction; Epithelium; Inflammation; Immunology; Chemistry; Interleukin; In vitro","score_opus":0.005863396384165631,"score_gpt":0.24389455263582416,"score_spread":0.23803115625165852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200101369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93111265,0.028778074,0.031430464,0.0013942958,0.00021874644,0.00016813447,0.00027894494,0.0003299947,0.0062886546],"genre_scores_gemma":[0.9825932,0.003665818,0.009351567,0.0004302469,0.000053750176,0.00011518612,0.00014731771,0.000019392479,0.0036235522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994136,0.00020299271,0.00004611509,0.00008110966,0.00012772834,0.0001284281],"domain_scores_gemma":[0.99982435,0.000021200001,0.000061763436,0.00002512018,0.000030484132,0.000037071157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038011165,0.0005177961,0.0004048138,0.00025779888,0.00020212366,0.00049259985,0.0002264605,0.0006982011,0.0011997427],"category_scores_gemma":[0.00023121682,0.00019464361,0.0004130026,0.00015396354,0.0004027917,0.0005723428,0.0008929303,0.00069982785,0.0005739981],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023445532,0.00005828818,0.00066115207,0.0001705741,0.000017675226,0.00031825193,0.000040127794,0.000063488034,0.9942321,0.00032961683,0.00010327389,0.003771042],"study_design_scores_gemma":[0.00009269956,0.0015274927,0.01986544,0.00009107537,0.00007125242,0.002169584,0.0002775824,0.0019367966,0.95550287,0.0010026697,0.017441187,0.000021188878],"about_ca_topic_score_codex":0.00019364031,"about_ca_topic_score_gemma":0.00026810146,"teacher_disagreement_score":0.0011997427,"about_ca_system_score_codex":0.00023495944,"about_ca_system_score_gemma":0.00028587013,"threshold_uncertainty_score":0.004013598},"labels":[],"label_agreement":null},{"id":"W4200471645","doi":"10.1007/978-1-0716-1892-9_9","title":"Adjuvants: Engineering Protective Immune Responses in Human and Veterinary Vaccines","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Immune system; Vaccine adjuvant; Acquired immune system; Adjuvant; Antigen; Immunology; Medicine; Innate immune system","score_opus":0.04216567438581861,"score_gpt":0.41916464214715166,"score_spread":0.376998967761333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200471645","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000096137,0.99819404,0.00052599993,0.00018392119,0.0003658596,0.000006438333,0.000018614894,0.00000933994,0.0005996993],"genre_scores_gemma":[0.0006038496,0.9974107,0.0005519164,0.00021289883,0.00028208867,0.000011887051,0.000046228095,0.0000032288497,0.000877215],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99965537,0.000054041284,0.00003750731,0.00005625941,0.00015469176,0.000042084343],"domain_scores_gemma":[0.9995105,0.00025660015,0.000067139794,0.000017851033,0.00010475867,0.00004317205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014014676,0.0015425391,0.001605009,0.0020590131,0.00022640674,0.0013409287,0.001095775,0.0016933598,0.0026045102],"category_scores_gemma":[0.0011462938,0.00047761522,0.0005238658,0.0019996557,0.00080416567,0.0016550015,0.0009984699,0.0031472805,0.0024973254],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107585205,0.0001369622,0.00007572627,0.010489145,0.000054813383,0.00007890598,0.00002915081,0.00065922725,0.006206913,0.0071778116,0.024144677,0.95083904],"study_design_scores_gemma":[0.000045119155,0.00019169653,0.0003460071,0.0028156114,0.000085912296,0.00048769443,0.000026377724,0.0002063466,0.0027636883,0.0032289152,0.98977685,0.00002582755],"about_ca_topic_score_codex":0.00082049484,"about_ca_topic_score_gemma":0.0013961416,"teacher_disagreement_score":0.0026045102,"about_ca_system_score_codex":0.0008699723,"about_ca_system_score_gemma":0.0011333644,"threshold_uncertainty_score":0.008712947},"labels":[],"label_agreement":null},{"id":"W4200488061","doi":"10.3390/vaccines10010014","title":"The Signal Peptide and Chaperone UNC93B1 Both Influence TLR8 Ectodomain Intracellular Endosomal Localization","year":2021,"lang":"en","type":"article","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Natural Science Foundation of China","keywords":"Ectodomain; Endosome; Cell biology; Intracellular; Biology; Innate immune system; Receptor; Biochemistry","score_opus":0.004880369838693835,"score_gpt":0.19937734795102946,"score_spread":0.19449697811233563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200488061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99455607,0.0024419427,0.00083872816,0.00017035927,0.00005789178,0.000010786607,0.00023292039,0.00005340911,0.0016378935],"genre_scores_gemma":[0.99725264,0.00071380165,0.0005533377,0.00015139951,0.000009229919,0.000013867739,0.00031398813,0.000018395473,0.0009733028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983776,0.000032632015,0.000011575119,0.000024838628,0.000031136766,0.000062086176],"domain_scores_gemma":[0.99988616,0.000024865405,0.000035399018,0.000009723606,0.000014970059,0.000028852131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010711091,0.00025829684,0.00023134846,0.000121539335,0.00018263877,0.00033231932,0.00012684778,0.00028102938,0.0017373337],"category_scores_gemma":[0.0002557137,0.000116805575,0.00017415898,0.00011792853,0.00018960367,0.00025982375,0.00025894016,0.00045715598,0.0004902481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046999738,0.0000508381,0.0003246861,0.00006620769,0.000009838474,0.00006550016,0.000018777013,0.00009548485,0.99644274,0.00008507027,0.00019518238,0.0021755185],"study_design_scores_gemma":[0.000055584675,0.00055036816,0.011998221,0.000023985847,0.000046591882,0.00032251238,0.00012365397,0.0017522234,0.9788649,0.0001660446,0.006077707,0.000018279989],"about_ca_topic_score_codex":0.0005540868,"about_ca_topic_score_gemma":0.0005340216,"teacher_disagreement_score":0.0017373337,"about_ca_system_score_codex":0.00021100957,"about_ca_system_score_gemma":0.0001331069,"threshold_uncertainty_score":0.0058119297},"labels":[],"label_agreement":null},{"id":"W4206986038","doi":"10.1097/shk.0000000000001915","title":"Functional Transcriptomic Studies of Immune Responses and Endotoxin Tolerance in Early Human Sepsis","year":2022,"lang":"en","type":"article","venue":"Shock","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Heart, Lung, and Blood Institute","keywords":"Sepsis; Immune system; Ex vivo; In vivo; Inflammation; Transcriptome","score_opus":0.027728841833412152,"score_gpt":0.26975837536228553,"score_spread":0.24202953352887338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206986038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99527955,0.0012904418,0.0019498706,0.00006211684,0.0000061756673,0.00001577734,0.0011280504,0.000009485069,0.00025851306],"genre_scores_gemma":[0.99575305,0.0008171471,0.0013292269,0.000051448795,0.000025583462,0.00005441891,0.0017246407,0.0000059202034,0.00023845649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997969,0.000065369095,0.0000188734,0.000048817736,0.000037223213,0.000032926186],"domain_scores_gemma":[0.99949884,0.00015779874,0.00017859021,0.000033137538,0.00007818296,0.000053468906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046848613,0.00022945025,0.00028864277,0.00076582085,0.00014827399,0.00032777674,0.00014251431,0.00022152766,0.0010440347],"category_scores_gemma":[0.00080045534,0.00007559667,0.0001927006,0.0006185969,0.00024005804,0.00017971465,0.00027545946,0.00024048804,0.0002263517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031439713,0.00020473075,0.22928835,0.00063720875,0.0001513427,0.0005623219,0.0004282538,0.001633236,0.73765314,0.00035675996,0.00029732633,0.025643334],"study_design_scores_gemma":[0.00004600896,0.001538197,0.92033786,0.00009222389,0.00017268828,0.0018702494,0.00046889705,0.003097755,0.0690244,0.00092449196,0.0023975507,0.000029706694],"about_ca_topic_score_codex":0.00014425065,"about_ca_topic_score_gemma":0.0001474319,"teacher_disagreement_score":0.0010440347,"about_ca_system_score_codex":0.00015764762,"about_ca_system_score_gemma":0.00013523472,"threshold_uncertainty_score":0.0034926534},"labels":[],"label_agreement":null},{"id":"W4210585739","doi":"10.21203/rs.3.rs-28977/v1","title":"S. Aureus Lipoteichoic Acid Failed to Activate NLRP3, but Downregulated the Transduction of NLRP3/MAPK and NF-κB Signaling Pathway in Mouse Mastitis Induced by S. Aureus","year":2020,"lang":"en","type":"preprint","venue":"Research Square (Research Square)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Natural Science Foundation of China","keywords":"Lipoteichoic acid; MAPK/ERK pathway; Inflammation; Signal transduction; Staphylococcus aureus; Innate immune system; Immune system; NF-κB; Mastitis; Mammary gland; Immunology; Cell biology; Chemistry; Biology; Medicine; Microbiology; Internal medicine; Bacteria","score_opus":0.06178101398819199,"score_gpt":0.3423510422098112,"score_spread":0.28057002822161925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210585739","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98946756,0.004277941,0.0041584703,0.00025956266,0.000111012465,0.0000626294,0.00052447285,0.000102294056,0.0010360085],"genre_scores_gemma":[0.9901097,0.0018794971,0.00316947,0.00015323565,0.00003088576,0.00012985583,0.0005678578,0.000023074266,0.003936439],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997439,0.00003847583,0.00003417568,0.000050146828,0.000072200004,0.00006108234],"domain_scores_gemma":[0.9998511,0.000012419817,0.000050349074,0.000016048374,0.000021728967,0.000048355905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020104383,0.0005601053,0.00036796313,0.00030454798,0.00015445657,0.00028367937,0.00014466526,0.00040238144,0.0015950591],"category_scores_gemma":[0.00010672176,0.0001581529,0.00049563986,0.00013074861,0.0003283062,0.00028898972,0.00019287835,0.0010487505,0.00034104998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015959913,0.000033974393,0.00006888248,0.00004671604,0.000002821971,0.000027134474,0.000008371181,0.000010599021,0.9992872,0.000020627984,0.000011524039,0.0003225747],"study_design_scores_gemma":[0.000024535853,0.0010752174,0.0034825918,0.000018068431,0.000026827769,0.00017003993,0.000059058846,0.0004623723,0.9933015,0.000060900984,0.0013138516,0.000004958631],"about_ca_topic_score_codex":0.0004147929,"about_ca_topic_score_gemma":0.00061944063,"teacher_disagreement_score":0.0015950591,"about_ca_system_score_codex":0.00023786718,"about_ca_system_score_gemma":0.00026848362,"threshold_uncertainty_score":0.0053359866},"labels":[],"label_agreement":null},{"id":"W4213042773","doi":"10.3389/fphar.2022.835081","title":"Pentamidine Alleviates Inflammation and Lipopolysaccharide-Induced Sepsis by Inhibiting TLR4 Activation via Targeting MD2","year":2022,"lang":"en","type":"article","venue":"Frontiers in Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Beijing National Laboratory for Molecular Sciences; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"TLR4; Lipopolysaccharide; Inflammation; Sepsis; Pentamidine; Medicine; Pharmacology; Chemistry; Immunology; Pneumonia; Internal medicine","score_opus":0.006949717152396397,"score_gpt":0.23691820698731278,"score_spread":0.22996848983491638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213042773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9843685,0.0094189225,0.0025003257,0.00034938715,0.00016881117,0.00007317465,0.0002831437,0.00021011215,0.002627632],"genre_scores_gemma":[0.99192226,0.0037493699,0.0017231648,0.00025470235,0.00003355819,0.000047861395,0.00030591252,0.000020439407,0.0019426245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995935,0.00000881853,0.0000039041183,0.0000069095813,0.000008410255,0.000012541238],"domain_scores_gemma":[0.99996924,0.0000039925358,0.000009220544,0.0000023945884,0.0000041876947,0.000010987283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000052065792,0.00030382499,0.00035291136,0.00015103877,0.00007776099,0.00013987928,0.00020571436,0.0002136931,0.0012895481],"category_scores_gemma":[0.00009492087,0.0000996401,0.00021068288,0.00007515047,0.0001332954,0.00020204119,0.00013170986,0.0006601665,0.00016211427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0028337697,0.0006154629,0.00017618331,0.00048803832,0.00004703608,0.00017900286,0.00002724499,0.00046398028,0.9779128,0.00019606069,0.00062037905,0.01644008],"study_design_scores_gemma":[0.000979106,0.014369593,0.00805418,0.00007593344,0.00020764345,0.0011528786,0.00007424792,0.0051135877,0.9490968,0.00030774318,0.020532576,0.000035663015],"about_ca_topic_score_codex":0.00036011048,"about_ca_topic_score_gemma":0.00049983704,"teacher_disagreement_score":0.0012895481,"about_ca_system_score_codex":0.000093052266,"about_ca_system_score_gemma":0.00014496436,"threshold_uncertainty_score":0.004313946},"labels":[],"label_agreement":null},{"id":"W4213207054","doi":"10.1093/jcag/gwab049.039","title":"A40 IDENTIFYING NOVEL ROLES FOR TLR2 SIGNALING IN THE INTESTINAL EPITHELIUM USING ORGANOIDS","year":2022,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"TLR2; Biology; CXCL1; Innate immune system; Organoid; Chemokine; Immunology; Toll-like receptor; CCL20; Intestinal epithelium; Receptor; Immune system; Cell biology; Microbiology; Epithelium; Chemokine receptor","score_opus":0.018012958353702264,"score_gpt":0.23909722552404425,"score_spread":0.221084267170342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213207054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9251691,0.008396554,0.051589113,0.00059951434,0.00045062802,0.00030114123,0.004312284,0.00064588315,0.008535754],"genre_scores_gemma":[0.97046745,0.0021540225,0.0183931,0.00018285519,0.000030582454,0.0003037114,0.0025240479,0.00005949015,0.0058848574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99951434,0.00010197683,0.00004703506,0.00013512545,0.0001286584,0.000072761504],"domain_scores_gemma":[0.99968326,0.00006664598,0.000051536183,0.000082952865,0.00004337349,0.000072302355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040979614,0.0007025714,0.0005100413,0.0005457222,0.00033709002,0.00089165714,0.00043127412,0.0007505199,0.0028193854],"category_scores_gemma":[0.00017785736,0.00024933997,0.0008333061,0.000332262,0.0004028384,0.0005935639,0.00066716346,0.0013796298,0.0013099094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001500255,0.000023556575,0.00017431984,0.00009808128,0.0000059481445,0.00009141439,0.000037774487,0.00011397588,0.9984024,0.000089477246,0.00006348101,0.0007495104],"study_design_scores_gemma":[0.00002612896,0.00044712104,0.0025504522,0.000027210634,0.0000344799,0.00043628848,0.0001940352,0.0017083763,0.98738796,0.00009898796,0.007073265,0.000015699781],"about_ca_topic_score_codex":0.0005740055,"about_ca_topic_score_gemma":0.00075309625,"teacher_disagreement_score":0.0028193854,"about_ca_system_score_codex":0.00039106418,"about_ca_system_score_gemma":0.00020947267,"threshold_uncertainty_score":0.009431779},"labels":[],"label_agreement":null},{"id":"W4213259216","doi":"10.4049/jimmunol.2100664","title":"Regulation of MHC Class I Expression in Lung Epithelial Cells during Inflammation","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"MHC class I; Chemokine; MHC class II; Biology; Cell biology; Inflammation; Immunology; Major histocompatibility complex; Antigen presentation; Respiratory epithelium; Downregulation and upregulation; CD8; T cell; Epithelium; Immune system; Gene","score_opus":0.005548747921499112,"score_gpt":0.2105820819077501,"score_spread":0.20503333398625098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213259216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99384683,0.002607407,0.001167068,0.000055388533,0.000033334134,0.00002027388,0.0006496059,0.000030785905,0.0015893291],"genre_scores_gemma":[0.9949615,0.00086266804,0.00094220496,0.00006968733,0.00003028531,0.000042496602,0.00086461584,0.00001065525,0.0022159647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999801,0.000034069555,0.000011367902,0.000041380226,0.000036716585,0.00007554604],"domain_scores_gemma":[0.99986136,0.00002657922,0.000035838704,0.0000121252615,0.000028388546,0.000035650126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001319706,0.00016797517,0.0001985307,0.0002900682,0.00017710599,0.00039010524,0.00008949319,0.00019876877,0.0013423874],"category_scores_gemma":[0.00011868483,0.00010341061,0.00016572908,0.00021334577,0.00021417222,0.0001500503,0.00018482668,0.0003546978,0.00052686664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008940929,0.000005973631,0.00042719982,0.000015303654,0.000001311318,0.00002507114,0.000011662754,0.0000070380065,0.999037,0.000017660133,0.000013478112,0.00034887987],"study_design_scores_gemma":[0.000023802475,0.00049446727,0.11891702,0.000026946333,0.0000248756,0.00041440758,0.0003154612,0.00063370715,0.8758719,0.00014383081,0.0031237972,0.000009776829],"about_ca_topic_score_codex":0.00027670554,"about_ca_topic_score_gemma":0.00028160634,"teacher_disagreement_score":0.0013423874,"about_ca_system_score_codex":0.00023703267,"about_ca_system_score_gemma":0.00012193018,"threshold_uncertainty_score":0.004490733},"labels":[],"label_agreement":null},{"id":"W4213350133","doi":"10.1016/j.jbc.2022.101747","title":"Interplay between nuclear factor-κB, p38 MAPK, and glucocorticoid receptor signaling synergistically induces functional TLR2 in lung epithelial cells","year":2022,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Glucocorticoid receptor; Cell biology; MAPK/ERK pathway; Signal transduction; Nuclear receptor; Glucocorticoid; TLR2; p38 mitogen-activated protein kinases; Lung; Receptor; Chemistry; Biology; Internal medicine; Endocrinology; Transcription factor; Medicine; Biochemistry; Gene; TLR4","score_opus":0.016517431930618883,"score_gpt":0.23996811655156178,"score_spread":0.2234506846209429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213350133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9886651,0.0046795453,0.0032264327,0.00022434744,0.000079921716,0.00005115175,0.0006360252,0.0001376163,0.0022998322],"genre_scores_gemma":[0.9944923,0.0010667918,0.0019835127,0.000105535015,0.000018249471,0.00006568228,0.0005370695,0.000013818464,0.0017171241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995828,0.00006584445,0.00003189071,0.00008011049,0.00010363272,0.0001356385],"domain_scores_gemma":[0.9998996,0.000011053568,0.000020834555,0.000015054745,0.000015173125,0.00003830651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020932592,0.00045693963,0.00038893826,0.00022131907,0.00021902712,0.0005231647,0.00018409308,0.00029452407,0.0013609093],"category_scores_gemma":[0.00010140641,0.00023321522,0.00048192943,0.00016819699,0.00020398908,0.00021232177,0.0004261449,0.0005302042,0.0006654137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116257615,0.000020069925,0.00015114399,0.000051496692,0.0000054158913,0.00004431298,0.000009824988,0.000025108877,0.99889624,0.00003594445,0.000030016161,0.0006142554],"study_design_scores_gemma":[0.000058085145,0.00054377085,0.010947955,0.00001473499,0.00003581721,0.00050245936,0.00015398013,0.00092735613,0.98273253,0.000093763316,0.00397797,0.00001153079],"about_ca_topic_score_codex":0.000347242,"about_ca_topic_score_gemma":0.00070343027,"teacher_disagreement_score":0.0013609093,"about_ca_system_score_codex":0.00025386116,"about_ca_system_score_gemma":0.00029460862,"threshold_uncertainty_score":0.004552722},"labels":[],"label_agreement":null},{"id":"W4220804966","doi":"10.3389/fimmu.2022.862992","title":"Mice Dually Disrupted for Nod2 and Mincle Manifest Early Bacteriological Control but Late Susceptibility During Mycobacterium tuberculosis Infection","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; McGill University Health Centre; McGill University","keywords":"NOD2; Tuberculosis; Mycobacterium tuberculosis; Microbiology; Immunology; Medicine; Biology; Infection control; Virology; Immune system; Innate immune system; Pathology","score_opus":0.005187566852763302,"score_gpt":0.20293426688704372,"score_spread":0.1977467000342804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220804966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952743,0.00051932666,0.0019121576,0.00011440086,0.00004359091,0.000027420594,0.0009403527,0.00014549328,0.0010229788],"genre_scores_gemma":[0.9902436,0.0004886436,0.0031077247,0.00009802143,0.000024775924,0.0001047143,0.000817916,0.00007289949,0.005041733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994966,0.00005092548,0.00007213933,0.00015763097,0.000082177605,0.00014059783],"domain_scores_gemma":[0.9992899,0.000048681617,0.00025356773,0.000054670825,0.000025200208,0.0003278589],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026829322,0.00092773716,0.0005735537,0.0008431571,0.00031412244,0.0006773811,0.0004279848,0.0009699474,0.002807012],"category_scores_gemma":[0.00024214118,0.0005483935,0.00036537592,0.00030355717,0.00082592934,0.00046771244,0.00060526986,0.0016208792,0.00091055094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048631433,0.00007491436,0.00056193914,0.000036992536,0.0000062328186,0.00015609592,0.00003411984,0.000043169624,0.99775153,0.00016093563,0.000040641025,0.00064717984],"study_design_scores_gemma":[0.00022903326,0.0017744814,0.042168714,0.00006331665,0.00008242375,0.004449187,0.00037503502,0.0016130825,0.9440131,0.00048542974,0.0046964334,0.000049764632],"about_ca_topic_score_codex":0.00029216617,"about_ca_topic_score_gemma":0.000685823,"teacher_disagreement_score":0.002807012,"about_ca_system_score_codex":0.0003113131,"about_ca_system_score_gemma":0.00019547237,"threshold_uncertainty_score":0.009390414},"labels":[],"label_agreement":null},{"id":"W4220835813","doi":"10.1371/journal.pone.0264911","title":"Effects of equine SALSA on neutrophil phagocytosis and macrophage cytokine production","year":2022,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Phagocytosis; SALSA; Macrophage inflammatory protein; Cytokine; Proinflammatory cytokine; Chemistry; Interleukin 8; Lipopolysaccharide; Tumor necrosis factor alpha; Microbiology; Interleukin; Molecular biology; Biology; Inflammation; Immunology","score_opus":0.01469078671491036,"score_gpt":0.19739479724612607,"score_spread":0.1827040105312157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220835813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99809474,0.0012703679,0.00011429163,0.00005382858,0.000015723515,0.000014012126,0.00006923601,0.000004634288,0.0003632111],"genre_scores_gemma":[0.99801826,0.00048680656,0.0003951639,0.00006823856,0.000018395309,0.000023671797,0.00017112834,0.0000024458873,0.0008158573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971765,0.000118513046,0.000020176394,0.00003103828,0.000038502054,0.0000741507],"domain_scores_gemma":[0.9997838,0.000074202864,0.000032942775,0.00001642625,0.00004640805,0.00004632876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043460168,0.00029294408,0.00032971206,0.00020412586,0.00017976025,0.00032328203,0.00013145679,0.00037129695,0.0011840848],"category_scores_gemma":[0.0004097432,0.00011225958,0.00029843464,0.000092305316,0.00032960676,0.00019093965,0.0002432064,0.0003206261,0.00022013718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005830732,0.00025984438,0.0018282414,0.00022677347,0.000020140615,0.00018779644,0.0001970319,0.00010375784,0.9873875,0.000039558538,0.00008806141,0.0038305926],"study_design_scores_gemma":[0.00015219362,0.01615586,0.06622811,0.00008171065,0.00008781268,0.0006895247,0.00048323235,0.0010892525,0.9114145,0.00008646025,0.0035079326,0.000023485585],"about_ca_topic_score_codex":0.00064566586,"about_ca_topic_score_gemma":0.0014677361,"teacher_disagreement_score":0.0011840848,"about_ca_system_score_codex":0.00018864847,"about_ca_system_score_gemma":0.00018886605,"threshold_uncertainty_score":0.003961146},"labels":[],"label_agreement":null},{"id":"W4220959054","doi":"10.1016/j.isci.2022.104160","title":"A Foxo1-Klf2-S1pr1-Gnai1-Rac1 signaling axis is a critical mediator of Ostm1 regulatory network in T lymphopoiesis","year":2022,"lang":"en","type":"article","venue":"iScience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Biology; Lymphopoiesis; Population; Bone marrow; Cell biology; KLF2; T cell; RAC1; FOXO1; Haematopoiesis; Signal transduction; Immunology; Stem cell; Downregulation and upregulation; Immune system; Genetics; Medicine","score_opus":0.010098114173889524,"score_gpt":0.24383585755947618,"score_spread":0.23373774338558664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220959054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9582922,0.0083311545,0.014542234,0.0013481708,0.00026586544,0.00007966066,0.0018904085,0.0008854908,0.014364761],"genre_scores_gemma":[0.9854372,0.0015795843,0.0034507415,0.00017579549,0.000029214927,0.000039484396,0.001087898,0.00007143709,0.008128511],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975055,0.000026172484,0.000011450826,0.00006955794,0.00006745503,0.00007478129],"domain_scores_gemma":[0.99982256,0.0000068753393,0.0000552969,0.000010537457,0.000025438017,0.000079350386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022468163,0.00045593895,0.00028424925,0.00042833298,0.00053082465,0.000537199,0.0002900162,0.000414839,0.003396133],"category_scores_gemma":[0.00015351833,0.00025170558,0.00032412825,0.00015844678,0.00046912336,0.00044368027,0.000693545,0.0009714447,0.0009922278],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029433717,0.000026245874,0.0017957938,0.00009403446,0.000013149727,0.00014502498,0.000044035256,0.00012035796,0.9903797,0.0015858597,0.000607959,0.004893527],"study_design_scores_gemma":[0.00015397115,0.0005106423,0.08125817,0.0000978062,0.0000957715,0.0011684728,0.00035662283,0.005459163,0.86397856,0.0016925809,0.04518448,0.00004376768],"about_ca_topic_score_codex":0.001113846,"about_ca_topic_score_gemma":0.0025171991,"teacher_disagreement_score":0.003396133,"about_ca_system_score_codex":0.00070549967,"about_ca_system_score_gemma":0.0007470381,"threshold_uncertainty_score":0.011361182},"labels":[],"label_agreement":null},{"id":"W4220978613","doi":"10.1038/s41590-022-01163-9","title":"Mechanisms of innate and adaptive immunity to the Pfizer-BioNTech BNT162b2 vaccine","year":2022,"lang":"en","type":"article","venue":"Nature Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":484,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Open Philanthropy Project; Sanofi; National Institute of Allergy and Infectious Diseases; Bill and Melinda Gates Foundation; Parker Institute for Cancer Immunotherapy; National Institutes of Health; U.S. Department of Health and Human Services; Genentech; Howard Hughes Medical Institute","keywords":"Pyroptosis; Inflammasome; Innate immune system; Acquired immune system; Immunization; Immunology; Immune system; T cell; Biology; Inflammation","score_opus":0.0051714364201018975,"score_gpt":0.2209199048663362,"score_spread":0.2157484684462343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220978613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8105579,0.10947152,0.03202347,0.009127602,0.002129031,0.00084055134,0.0009861176,0.00057753833,0.034286156],"genre_scores_gemma":[0.9730654,0.012285199,0.0037909125,0.0010982966,0.000372608,0.00036093948,0.00053071015,0.0000497122,0.008446199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989862,0.00024127199,0.000041448126,0.00011936097,0.00025494656,0.00035675985],"domain_scores_gemma":[0.9997423,0.000046808826,0.0000861959,0.0000281737,0.000037905495,0.00005860306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010667584,0.0008416461,0.0006583686,0.00071905385,0.00035121856,0.0013350758,0.000613283,0.0012502255,0.0041101286],"category_scores_gemma":[0.00047279763,0.00036236166,0.00062803924,0.00013304828,0.0007957712,0.0013701414,0.00092982996,0.0025131484,0.0011172578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001452465,0.00043793768,0.0015732332,0.0007512063,0.00007111515,0.00036181477,0.00014732774,0.0017252002,0.9249409,0.013691761,0.0032063057,0.05164076],"study_design_scores_gemma":[0.000760779,0.007678597,0.020405443,0.00063102506,0.00022751091,0.003929093,0.0006401437,0.0140029285,0.8383737,0.019286316,0.09395943,0.000105089326],"about_ca_topic_score_codex":0.0002494755,"about_ca_topic_score_gemma":0.00021051825,"teacher_disagreement_score":0.0041101286,"about_ca_system_score_codex":0.00076480786,"about_ca_system_score_gemma":0.00059580524,"threshold_uncertainty_score":0.013749719},"labels":[],"label_agreement":null},{"id":"W4220994403","doi":"10.1172/jci140869","title":"Tankyrase represses autoinflammation through the attenuation of TLR2 signaling","year":2022,"lang":"en","type":"article","venue":"Journal of Clinical Investigation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; SickKids Foundation; University Health Network; University of Toronto; Toronto Centre for Phenogenomics; Princess Margaret Cancer Centre","funders":"Japan Society for the Promotion of Science; Daiichi Sankyo Foundation of Life Science; Toray Science Foundation; Japan Intractable Diseases Research Foundation; Japan Foundation for Applied Enzymology","keywords":"Syk; TLR2; Phosphorylation; Inflammation; Signal transducing adaptor protein; Cell biology; Tyrosine phosphorylation; Signal transduction; Cancer research; Biology; Proto-oncogene tyrosine-protein kinase Src; TRIF; Cytokine; Innate immune system; Immunology; Tyrosine kinase; Toll-like receptor; TLR4; Immune system","score_opus":0.07134989035841112,"score_gpt":0.34908553086792554,"score_spread":0.27773564050951444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220994403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927021,0.0026848875,0.0024802063,0.00031305657,0.00005023673,0.000028147482,0.0004260664,0.00018946275,0.0011257957],"genre_scores_gemma":[0.9953041,0.0007316412,0.0015186751,0.00006105525,0.000020289206,0.000025031568,0.00033413098,0.000018475435,0.00198652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983346,0.00004050157,0.000018447072,0.000028515742,0.000035524987,0.000043514086],"domain_scores_gemma":[0.9998554,0.00001879346,0.00005799314,0.00001596554,0.000011829184,0.000039983548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002028699,0.000338491,0.00026889553,0.00019977712,0.00011158327,0.00034896153,0.00023948561,0.00025629535,0.0019052168],"category_scores_gemma":[0.00016733588,0.00010765177,0.0001826405,0.00011781669,0.00028941847,0.00021786075,0.00021798938,0.0007610749,0.00040466466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020524436,0.0000355035,0.00009431742,0.000029082146,0.0000047347253,0.000033990553,0.0000068955114,0.0000376603,0.9985543,0.000050068724,0.000047667094,0.0009005085],"study_design_scores_gemma":[0.000106820255,0.000923835,0.0033640405,0.000008257418,0.000017851558,0.00036333143,0.000023083487,0.000747941,0.99163955,0.00008884251,0.002711149,0.0000052586947],"about_ca_topic_score_codex":0.00034574268,"about_ca_topic_score_gemma":0.0006549291,"teacher_disagreement_score":0.0019052168,"about_ca_system_score_codex":0.00024162109,"about_ca_system_score_gemma":0.0002591345,"threshold_uncertainty_score":0.0063735247},"labels":[],"label_agreement":null},{"id":"W4221017497","doi":"10.1155/2022/9946439","title":"Extracellular Cardiolipin Modulates Select Immune Functions of Astrocytes in Toll-Like Receptor (TLR) 4-Dependent Manner","year":2022,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; University of British Columbia","keywords":"Toll-like receptor; Extracellular; Immune system; Cardiolipin; Receptor; Cell biology; Toll; Immunology; Chemistry; Biology; Innate immune system; Biochemistry","score_opus":0.004700784668436346,"score_gpt":0.19349288577966453,"score_spread":0.18879210111122818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221017497","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936172,0.0035139625,0.0010218308,0.00013164767,0.00006454863,0.000034988345,0.00015049253,0.000028080189,0.0014372155],"genre_scores_gemma":[0.99547786,0.001928587,0.0008554928,0.000120061035,0.000039235445,0.00005314665,0.00015566553,0.0000062764443,0.0013636067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998273,0.000049013284,0.00001947432,0.000019329776,0.000026076677,0.00005886566],"domain_scores_gemma":[0.99993396,0.00000802922,0.000021469117,0.000005496212,0.00001356223,0.000017457798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116858144,0.0003336428,0.0002599608,0.00021641198,0.00015329904,0.00024334049,0.00011851225,0.0002513243,0.0008177669],"category_scores_gemma":[0.000115980925,0.00012588261,0.00033814524,0.00011637342,0.00019703635,0.00021030437,0.00020319493,0.00044168197,0.00023440745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077655725,0.00009311242,0.00035168338,0.00010386252,0.000011971325,0.0001388671,0.00002903504,0.00004207502,0.99688077,0.00004353911,0.00004758716,0.001480898],"study_design_scores_gemma":[0.00019509108,0.0021792885,0.021460027,0.000028262153,0.000112231144,0.0005503224,0.00015732695,0.0014495933,0.97010875,0.0002045606,0.0035412922,0.000013285044],"about_ca_topic_score_codex":0.00026194146,"about_ca_topic_score_gemma":0.00046884912,"teacher_disagreement_score":0.0008177669,"about_ca_system_score_codex":0.00014405766,"about_ca_system_score_gemma":0.00017236682,"threshold_uncertainty_score":0.002735734},"labels":[],"label_agreement":null},{"id":"W4221111533","doi":"10.1038/s41598-022-07804-1","title":"Valosin-containing protein-regulated endoplasmic reticulum stress causes NOD2-dependent inflammatory responses","year":2022,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Leibniz-Gemeinschaft; Daimler und Benz Stiftung; China Scholarship Council; Leona M. and Harry B. Helmsley Charitable Trust; Care-for-Rare Foundation; Bayerische Forschungsstiftung; Bundesministerium für Bildung und Forschung; Deutsche Forschungsgemeinschaft","keywords":"NOD2; Proinflammatory cytokine; Unfolded protein response; Muramyl dipeptide; CXCL2; Gene knockdown; Tunicamycin; Cell biology; Endoplasmic reticulum; CXCL1; Biology; Mutant; Chemistry; Inflammation; Immunology; Genetics; Chemokine; Cell culture; Immune system; Gene; Innate immune system","score_opus":0.009718985970858008,"score_gpt":0.22137879038845792,"score_spread":0.2116598044175999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221111533","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99888533,0.00021223293,0.00048916,0.00004675755,0.000010997648,0.0000064157157,0.00007875185,0.000018413188,0.00025196193],"genre_scores_gemma":[0.999212,0.00009693249,0.00026839657,0.000029124625,0.0000067331794,0.000006138106,0.00011591204,0.0000056245103,0.00025902904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998037,0.00005641896,0.000026635313,0.000065321066,0.000019973122,0.000027980119],"domain_scores_gemma":[0.99984944,0.000026772068,0.00006452072,0.000014751462,0.00000822785,0.000036315614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014358124,0.00055566104,0.00022718933,0.00021093957,0.0001249274,0.00019562768,0.00010449046,0.00033989895,0.0012384705],"category_scores_gemma":[0.00020040346,0.0001380424,0.00021888476,0.00017303854,0.00032326416,0.00010078683,0.00029102276,0.00036487656,0.00023856924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064066646,0.000065920925,0.006246937,0.00006863712,0.000035687783,0.0052947234,0.000035655397,0.000094311625,0.98564595,0.00012359784,0.000086396445,0.0016614177],"study_design_scores_gemma":[0.0003316282,0.0017700286,0.22186773,0.00007265932,0.00022785312,0.07927556,0.00031393184,0.003940899,0.68599343,0.00059069105,0.005573763,0.000041955413],"about_ca_topic_score_codex":0.0001432406,"about_ca_topic_score_gemma":0.00018587097,"teacher_disagreement_score":0.0012384705,"about_ca_system_score_codex":0.0001440512,"about_ca_system_score_gemma":0.00007611576,"threshold_uncertainty_score":0.0041430593},"labels":[],"label_agreement":null},{"id":"W4223438764","doi":"10.1016/j.jhep.2022.03.030","title":"Untangling the web: The complex parenchymal-immune interface in endotoxemia","year":2022,"lang":"en","type":"letter","venue":"Journal of Hepatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canada Research Chairs; University Health Network; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Sepsis; Immune system; Hepatology; Pathophysiology; Medicine; Systemic inflammation; Lipopolysaccharide; Small hairpin RNA; Immunology; Systemic inflammatory response syndrome; Inflammation; Bioinformatics; Biology; Internal medicine; Gene; RNA; Genetics","score_opus":0.022798861994799333,"score_gpt":0.2589586476293413,"score_spread":0.23615978563454196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223438764","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007406712,0.009535391,0.0007512503,0.9514105,0.026542041,0.000013471777,0.000021368985,0.00004456955,0.0042746803],"genre_scores_gemma":[0.10558541,0.010712523,0.0011529303,0.47761488,0.39613065,0.00006094146,0.000026509695,0.00005512716,0.008661165],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99880695,0.0005595331,0.000111966176,0.00011912783,0.00022290865,0.00017951571],"domain_scores_gemma":[0.995978,0.0028049718,0.00023729971,0.00017126011,0.00031800003,0.00049047126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001902322,0.0007141958,0.0012807925,0.00051464426,0.0015284038,0.0026280333,0.0009066625,0.020864714,0.0031494356],"category_scores_gemma":[0.0080078645,0.00044146436,0.000619157,0.0002944348,0.002663156,0.0046528215,0.0011578398,0.01862854,0.0021012211],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00075648585,0.0001927585,0.00536646,0.00040532296,0.000091719914,0.15078945,0.0009678416,0.00031708632,0.0022555932,0.01805415,0.77278954,0.048013527],"study_design_scores_gemma":[0.00092201435,0.0004430709,0.008055043,0.0010930662,0.00017629286,0.18176034,0.0027851663,0.004899418,0.0020318117,0.12972127,0.6679025,0.000209983],"about_ca_topic_score_codex":0.00068247365,"about_ca_topic_score_gemma":0.0008776543,"teacher_disagreement_score":0.020864714,"about_ca_system_score_codex":0.0015001562,"about_ca_system_score_gemma":0.0007617304,"threshold_uncertainty_score":0.010884464},"labels":[],"label_agreement":null},{"id":"W4224278198","doi":"10.1101/2022.04.06.487252","title":"Prostaglandins and calprotectin are genetically and functionally linked to the Inflammatory Bowel Diseases","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University Health Centre; Montreal Heart Institute","funders":"Broad Institute; Institut de Cardiologie de Montréal; Université de Montréal; Department of Epidemiology, Biostatistics and Occupational Health, McGill University; McGill University Health Centre; McGill University","keywords":"Biology; Genome-wide association study; Transcriptome; Inflammatory bowel disease; S100A9; Gene; Genetics; Gene expression; Computational biology; Single-nucleotide polymorphism; Medicine; Disease; Genotype","score_opus":0.008187806371365224,"score_gpt":0.19900290298421766,"score_spread":0.19081509661285243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224278198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920133,0.0038285945,0.0017545016,0.0001938703,0.00002383703,0.000017576725,0.0013087589,0.00004035434,0.00081932923],"genre_scores_gemma":[0.996276,0.0011212782,0.0014074778,0.000060323946,0.000020688949,0.000016961798,0.00056068104,0.000005401783,0.00053120137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998411,0.000038541897,0.000013510175,0.00005234294,0.000032424316,0.000022069622],"domain_scores_gemma":[0.99975604,0.000040689327,0.0001379792,0.00001567801,0.00001352754,0.00003599742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018064049,0.0002784411,0.00024365552,0.0006359663,0.00012567728,0.00026221832,0.00013142108,0.00024403915,0.0018121455],"category_scores_gemma":[0.00021841713,0.00009812251,0.0002602075,0.00047412203,0.00020128956,0.000081800914,0.00019254118,0.00041691298,0.00016689004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002526406,0.00013056624,0.11379835,0.0003636675,0.00023672974,0.0010859286,0.00005183403,0.00029717886,0.8673593,0.0005738005,0.0002456766,0.013330484],"study_design_scores_gemma":[0.00007118412,0.0006005407,0.8615614,0.000050966963,0.00033080575,0.003352433,0.0001126703,0.0010586419,0.12869209,0.0007075199,0.0034476207,0.0000141523],"about_ca_topic_score_codex":0.00037626107,"about_ca_topic_score_gemma":0.00041751415,"teacher_disagreement_score":0.0018121455,"about_ca_system_score_codex":0.00019030062,"about_ca_system_score_gemma":0.00013799172,"threshold_uncertainty_score":0.006062269},"labels":[],"label_agreement":null},{"id":"W4226051864","doi":"10.12938/bmfh.2021-057","title":"&lt;i&gt;Lactococcus lactis&lt;/i&gt; subsp. &lt;i&gt;cremoris&lt;/i&gt; C60 induces macrophages activation that enhances CD4+ T cell-based adaptive immunity","year":2022,"lang":"en","type":"article","venue":"Bioscience of Microbiota Food and Health","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Japan Society for the Promotion of Science; Mishima Kaiun Memorial Foundation; National Agriculture and Food Research Organization; National Institute of Advanced Industrial Science and Technology","keywords":"CD80; CD86; Antigen presentation; T cell; Antigen; Cell biology; Immune system; Lactococcus lactis; Biology; Antigen-presenting cell; Antigen processing; Chemistry; CD40; Molecular biology; Immunology; Cytotoxic T cell; Biochemistry","score_opus":0.026229610709857864,"score_gpt":0.25679443675458263,"score_spread":0.23056482604472478,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226051864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944014,0.0007266323,0.0020040632,0.0001759621,0.00006825672,0.00006450249,0.0005126289,0.00017671399,0.0018698729],"genre_scores_gemma":[0.98987913,0.00054708787,0.0033199145,0.00017946148,0.00003097853,0.00006483543,0.001163155,0.00007247982,0.004742865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974626,0.00003058451,0.000028165186,0.00005741453,0.00005978502,0.00007778868],"domain_scores_gemma":[0.99984086,0.000008803084,0.000056733195,0.000015605257,0.000016750462,0.00006111944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011929891,0.0006391805,0.00037173153,0.0004070076,0.00016576654,0.0002425684,0.00023070042,0.00031586032,0.0015868653],"category_scores_gemma":[0.000093568975,0.00016231784,0.0002862192,0.00020599758,0.00034004773,0.00019505642,0.00027446408,0.0007736879,0.0005414805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014146083,0.00005023951,0.000066001,0.00001729744,0.0000025030079,0.000026231735,0.000004865372,0.000009981466,0.9990969,0.000020285746,0.000027674412,0.0005365849],"study_design_scores_gemma":[0.00003858823,0.0010769452,0.004568389,0.0000086285045,0.000027764228,0.00020635506,0.000027846167,0.0002889079,0.9916543,0.000027568534,0.0020680642,0.00000666747],"about_ca_topic_score_codex":0.000977066,"about_ca_topic_score_gemma":0.001004545,"teacher_disagreement_score":0.0015868653,"about_ca_system_score_codex":0.00027847718,"about_ca_system_score_gemma":0.00023019244,"threshold_uncertainty_score":0.0053085685},"labels":[],"label_agreement":null},{"id":"W4226057301","doi":"10.3389/fcell.2022.898569","title":"Editorial: Toll-Like Receptors Throughout Life: From Controlling Physiological Processes to Determinants of Disease","year":2022,"lang":"en","type":"editorial","venue":"Frontiers in Cell and Developmental Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Toll; Receptor; Biology; Disease; Neuroscience; Cell biology; Immunology; Medicine; Genetics; Internal medicine","score_opus":0.0073926837328848255,"score_gpt":0.23904285351130639,"score_spread":0.23165016977842157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226057301","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008927843,0.003961272,0.0001443982,0.01994321,0.9749094,0.000017472408,0.00006452193,0.00008462553,0.00078569294],"genre_scores_gemma":[0.000516449,0.0037087996,0.00008235703,0.01376044,0.9779302,0.000013275079,0.000045333683,0.00003330617,0.0039099483],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99663275,0.00053437473,0.00039869559,0.0007167889,0.0013933858,0.00032395986],"domain_scores_gemma":[0.98769253,0.004987256,0.00084405096,0.0003402278,0.0038863001,0.0022495578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043122894,0.0047539407,0.0036462066,0.0025361653,0.0020867137,0.005687781,0.004276281,0.011397947,0.022420686],"category_scores_gemma":[0.012987698,0.001175191,0.0031314432,0.0010752922,0.0024833146,0.00561595,0.0014057786,0.016172186,0.016822778],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014613409,0.000039905637,0.00008021015,0.0005732659,0.000034280616,0.00021456815,0.00002040421,0.00007157577,0.00019731272,0.0003451828,0.98896736,0.009309839],"study_design_scores_gemma":[0.000118693235,0.00012639385,0.00053252885,0.0005659373,0.00007675794,0.00079826015,0.000061583814,0.00024842692,0.00037197198,0.0010987258,0.9959578,0.000042967262],"about_ca_topic_score_codex":0.0006327722,"about_ca_topic_score_gemma":0.001014829,"teacher_disagreement_score":0.022420686,"about_ca_system_score_codex":0.0018998618,"about_ca_system_score_gemma":0.0019381025,"threshold_uncertainty_score":0.07500464},"labels":[],"label_agreement":null},{"id":"W4226316631","doi":"10.3389/fimmu.2021.764390","title":"Single Nucleotide Polymorphisms in the Bovine TLR2 Extracellular Domain Contribute to Breed and Species-Specific Innate Immune Functionality","year":2021,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Innate immune system; Single-nucleotide polymorphism; Biology; TLR2; Breed; Immune system; Genetics; Immunology; Genotype; Gene","score_opus":0.010515980428159571,"score_gpt":0.1997817907168624,"score_spread":0.18926581028870282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226316631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989317,0.00027522972,0.0003767175,0.000030033721,0.0000039489255,0.0000031968,0.00015641788,0.000005746502,0.00021700925],"genre_scores_gemma":[0.9991524,0.00006472673,0.00025296674,0.000033263255,0.0000066298744,0.0000054251595,0.00025793887,0.000004547985,0.00022213592],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974066,0.000081706305,0.000024910723,0.00007104937,0.000040333194,0.000041372914],"domain_scores_gemma":[0.9997749,0.00006860383,0.000087360466,0.000017979448,0.000015342952,0.00003578158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002915543,0.00020156996,0.00017137028,0.000307729,0.00012332905,0.00023472814,0.00012452483,0.00027599075,0.001969313],"category_scores_gemma":[0.0002682265,0.000097086515,0.00018095509,0.0002269092,0.0001406144,0.00007476369,0.00016471626,0.0002115428,0.00030358872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016957304,0.000100158926,0.13054168,0.00008369972,0.00012119959,0.00057733536,0.00019536582,0.00012489587,0.85952413,0.00009262886,0.00012669318,0.0068165213],"study_design_scores_gemma":[0.00003973543,0.00029461965,0.9660424,0.000015936876,0.000096231626,0.0018980006,0.0001187876,0.00055163034,0.029098382,0.00007866161,0.0017552874,0.000010300234],"about_ca_topic_score_codex":0.0005782576,"about_ca_topic_score_gemma":0.0008797122,"teacher_disagreement_score":0.001969313,"about_ca_system_score_codex":0.00011530704,"about_ca_system_score_gemma":0.00007062607,"threshold_uncertainty_score":0.006587982},"labels":[],"label_agreement":null},{"id":"W4229864619","doi":"10.1159/000062726","title":"Subject Index","year":2001,"lang":"en","type":"book-chapter","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Index (typography); Subject (documents); Mathematics; Computer science; Library science; World Wide Web","score_opus":0.01227131867582574,"score_gpt":0.21578725401205107,"score_spread":0.20351593533622533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229864619","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001307048,0.0026471762,0.0013336625,0.007704949,0.013802796,0.00042730468,0.007007395,0.000911995,0.9648577],"genre_scores_gemma":[0.00534604,0.0019318627,0.00073438254,0.0032854646,0.0022523985,0.00027586636,0.0045848843,0.00046413162,0.9811249],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990663,0.00016003169,0.00009096018,0.0002239434,0.0003194122,0.00013936905],"domain_scores_gemma":[0.9979036,0.00022788579,0.00009733471,0.00023700215,0.00089177425,0.0006425369],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0008724482,0.00074770796,0.0009471199,0.0016728682,0.0021261384,0.0047044456,0.0016498192,0.0019696513,0.8101571],"category_scores_gemma":[0.005216487,0.00023839642,0.00042124832,0.0019084429,0.00048996566,0.0030347493,0.002900731,0.0014241387,0.6710123],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007759463,0.000056902463,0.00052409404,0.00031274426,0.0000035789,0.00016237295,0.00018653258,0.000023079268,0.0002808637,0.0062489677,0.8899325,0.10219073],"study_design_scores_gemma":[0.000005851655,0.000014153155,0.0003188409,0.00010741507,0.0000014497584,0.00014006453,0.0001195967,0.000018405384,0.000048159494,0.0010771508,0.99814606,0.0000028368815],"about_ca_topic_score_codex":0.0014556437,"about_ca_topic_score_gemma":0.002124761,"teacher_disagreement_score":0.18984288,"about_ca_system_score_codex":0.0012707677,"about_ca_system_score_gemma":0.0022398832,"threshold_uncertainty_score":0.27078784},"labels":[],"label_agreement":null},{"id":"W4231907125","doi":"10.3410/f.725390405.793526436","title":"Faculty Opinions recommendation of Catchup: a mouse model for imaging-based tracking and modulation of neutrophil granulocytes.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tracking (education); Modulation (music); Computer science; Psychology; Physics; Acoustics; Pedagogy","score_opus":0.02740424117644516,"score_gpt":0.32390696406618075,"score_spread":0.29650272288973556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231907125","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044800204,0.00042591698,0.00023631158,0.00014509668,0.00007211455,0.000042381347,0.99684995,0.0011346083,0.0006455365],"genre_scores_gemma":[0.0009395325,0.00019236034,0.00072989933,0.00010425608,0.000014659963,0.00011145222,0.99691856,0.00010286915,0.000886475],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984345,0.00029626023,0.00018320566,0.00050554535,0.00039316848,0.00018736879],"domain_scores_gemma":[0.997317,0.00070224394,0.0003410724,0.00077234244,0.0005087817,0.00035861775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021523724,0.003776522,0.0021940167,0.0029430813,0.00082543335,0.0028165728,0.0039064856,0.0040965937,0.029763302],"category_scores_gemma":[0.008355463,0.0008933124,0.0029343783,0.003128185,0.00048607396,0.0015094444,0.0022602687,0.0019794651,0.055340286],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037956602,0.00009635512,0.0034894354,0.0020622844,0.0002162477,0.00005138592,0.00002291227,0.0007331569,0.000646816,0.0003058042,0.9845716,0.0074245036],"study_design_scores_gemma":[0.0011975318,0.00014656712,0.014587227,0.0010728198,0.0004495029,0.00025933093,0.0000828342,0.0043681143,0.0028621,0.002326688,0.9725301,0.00011714494],"about_ca_topic_score_codex":0.029430356,"about_ca_topic_score_gemma":0.07226389,"teacher_disagreement_score":0.029763302,"about_ca_system_score_codex":0.0015154248,"about_ca_system_score_gemma":0.0026814207,"threshold_uncertainty_score":0.09956819},"labels":[],"label_agreement":null},{"id":"W4233150598","doi":"10.3410/f.726258924.793526437","title":"Faculty Opinions recommendation of Neutrophil-specific deletion of the CARD9 gene expression regulator suppresses autoantibody-induced inflammation in vivo.","year":2016,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"In vivo; Inflammation; Regulator; Autoantibody; Gene expression; Gene; Expression (computer science); Immunology; Medicine; Cell biology; Biology; Cancer research; Genetics; Antibody; Computer science","score_opus":0.021032095034623596,"score_gpt":0.3047856847802168,"score_spread":0.28375358974559317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233150598","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002492802,0.00018710257,0.000051892628,0.00011957606,0.000040323124,0.0000143134475,0.99856216,0.00023195395,0.0005433873],"genre_scores_gemma":[0.0007118477,0.00015428988,0.00024506386,0.00009560636,0.000012341595,0.000047724763,0.9978878,0.000040504834,0.0008049274],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988906,0.000176233,0.00015354322,0.0003320993,0.0003000679,0.00014752061],"domain_scores_gemma":[0.99756753,0.00060582947,0.0003763496,0.0005205419,0.0005567726,0.00037301815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013483841,0.0021040367,0.0017513644,0.0026503962,0.00062256004,0.0024713026,0.0023811145,0.0025613664,0.05477338],"category_scores_gemma":[0.007863809,0.00060760265,0.0020882217,0.0035361166,0.00033237287,0.0013144616,0.0016534792,0.0014971308,0.056825083],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030602474,0.00004988399,0.0026769848,0.0016372,0.00014483114,0.00003855615,0.00001599211,0.00029351798,0.00035062394,0.00024403633,0.98969847,0.0045437957],"study_design_scores_gemma":[0.0011780923,0.00008540944,0.015445415,0.0009988718,0.00028732923,0.00017375719,0.000072894574,0.0011335352,0.0012923311,0.0013935557,0.9778776,0.0000611281],"about_ca_topic_score_codex":0.020149248,"about_ca_topic_score_gemma":0.048263833,"teacher_disagreement_score":0.05477338,"about_ca_system_score_codex":0.0011557719,"about_ca_system_score_gemma":0.0026749377,"threshold_uncertainty_score":0.18323517},"labels":[],"label_agreement":null},{"id":"W4234317413","doi":"10.1146/annurev.biochem.71.110601.135414","title":"Lipopolysaccharide Endotoxins","year":2002,"lang":"en","type":"review","venue":"Annual Review of Biochemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4315,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of General Medical Sciences","keywords":"Lipid A; Biology; TLR4; Lipopolysaccharide; Innate immune system; Bacterial outer membrane; Receptor; Cell biology; Signal transduction; Biochemistry; Periplasmic space; Lipid signaling; Gene; Immunology","score_opus":0.017473091890582916,"score_gpt":0.3006004416362896,"score_spread":0.28312734974570664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234317413","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002011081,0.9651828,0.002527149,0.0012651901,0.0037437403,0.00006754711,0.00019188065,0.00014942797,0.024861256],"genre_scores_gemma":[0.019558217,0.91930634,0.0034212163,0.0027097547,0.001448478,0.00011234651,0.0009371353,0.000028296252,0.0524781],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99977964,0.00004276336,0.000021336531,0.00003679351,0.00008477868,0.00003475423],"domain_scores_gemma":[0.99988604,0.000015157155,0.000019048535,0.000008304659,0.00003479561,0.000036611345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029082998,0.001383902,0.0009965929,0.0011040069,0.0004663884,0.0011777859,0.00074603606,0.0013580893,0.008382514],"category_scores_gemma":[0.00034778734,0.00016709433,0.00028679366,0.0010015483,0.0005988796,0.00087390374,0.0009650242,0.0013766689,0.01479339],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024291879,0.000131348,0.0004831535,0.0050797677,0.00006272992,0.0009891426,0.000117660806,0.00038297044,0.03347852,0.016818652,0.079999544,0.8622135],"study_design_scores_gemma":[0.000012567492,0.00005873754,0.00032270025,0.00034489736,0.000010791825,0.0012499148,0.000029633726,0.000024149695,0.003171336,0.0016874905,0.9930796,0.000008159967],"about_ca_topic_score_codex":0.00054314523,"about_ca_topic_score_gemma":0.00048445893,"teacher_disagreement_score":0.008382514,"about_ca_system_score_codex":0.0007426062,"about_ca_system_score_gemma":0.0006799984,"threshold_uncertainty_score":0.028042376},"labels":[],"label_agreement":null},{"id":"W4236846682","doi":"10.1111/j.1525-1373.2000.22304.x","title":"How the Blood Talks to the Brain Parenchyma and the Paraventricular Nucleus of the Hypothalamus During Systemic Inflammatory and Infectious Stimuli","year":2000,"lang":"en","type":"article","venue":"Proceedings of The Society for Experimental Biology and Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Proinflammatory cytokine; Signal transduction; STAT protein; Inflammation; Cell biology; Biology; Neuroscience; Transcription factor; Receptor; Blood–brain barrier; Janus kinase; Central nervous system; Immunology; STAT3","score_opus":0.006120265275267438,"score_gpt":0.22451161214984758,"score_spread":0.21839134687458014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236846682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.863103,0.059649322,0.036699157,0.00516952,0.0029216986,0.0001524216,0.00053423183,0.00027855003,0.03149219],"genre_scores_gemma":[0.96535695,0.008443508,0.0055752164,0.00091235724,0.00047819878,0.0001221331,0.00017206259,0.00006931025,0.018870287],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997999,0.000041986234,0.000005828586,0.00005656615,0.00003647785,0.00005930513],"domain_scores_gemma":[0.99990284,0.000012723276,0.000018096238,0.000006251764,0.000023349921,0.00003663194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019145393,0.00029834363,0.00028290338,0.00033100112,0.0004736387,0.00075205567,0.00029342822,0.00066637644,0.0026812165],"category_scores_gemma":[0.0002527558,0.00020821775,0.00031349628,0.0001475257,0.0009682383,0.0010911335,0.00044362256,0.0010594841,0.0005115843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086380343,0.0000664306,0.0033664876,0.00058131333,0.00007767058,0.0029833121,0.001322954,0.00028642308,0.9369612,0.01010535,0.0016760803,0.041709024],"study_design_scores_gemma":[0.00030016102,0.0034827644,0.2820976,0.0008317761,0.00039867667,0.009009298,0.012800484,0.0057561933,0.5552671,0.034136303,0.095716506,0.00020318483],"about_ca_topic_score_codex":0.0009311816,"about_ca_topic_score_gemma":0.0012709451,"teacher_disagreement_score":0.0026812165,"about_ca_system_score_codex":0.00049356924,"about_ca_system_score_gemma":0.0004787769,"threshold_uncertainty_score":0.008969605},"labels":[],"label_agreement":null},{"id":"W4238104725","doi":"10.3410/f.1025886.320842","title":"Faculty Opinions recommendation of Toll-like receptor 3 promotes cross-priming to virus-infected cells.","year":2005,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Toll; Priming (agriculture); Toll-like receptor; Virology; Receptor; Virus; Biology; Immunology; Innate immune system; Genetics; Botany","score_opus":0.022496333812212912,"score_gpt":0.3391169603231265,"score_spread":0.3166206265109136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238104725","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00051802536,0.00033997284,0.000053063013,0.00013163906,0.000043916298,0.000010994739,0.9980155,0.00023366883,0.0006532364],"genre_scores_gemma":[0.0016662286,0.00018529584,0.00024545554,0.000082073406,0.000015644157,0.000035797577,0.9967823,0.000034744877,0.00095232605],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99850583,0.0002673794,0.00018753718,0.000456016,0.00040782738,0.0001754375],"domain_scores_gemma":[0.9963833,0.0011541455,0.0006628926,0.00063181913,0.0007729141,0.00039486567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012882475,0.0021986272,0.0018013908,0.0034020096,0.0006749427,0.002643485,0.0022487522,0.0024645797,0.045370482],"category_scores_gemma":[0.009508531,0.0005705968,0.0020378926,0.0042173336,0.0002757443,0.0010421735,0.0011141951,0.0015055585,0.039829403],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041855552,0.000057627065,0.004733547,0.0020151453,0.00018265806,0.00003909732,0.000014605964,0.00044113575,0.00031503197,0.00024365968,0.985735,0.005804056],"study_design_scores_gemma":[0.0013248019,0.00012449278,0.041903257,0.00091429555,0.0005496013,0.00021560394,0.00007313642,0.0025160003,0.0020710113,0.0012344244,0.94899553,0.000077956734],"about_ca_topic_score_codex":0.027899817,"about_ca_topic_score_gemma":0.054237705,"teacher_disagreement_score":0.045370482,"about_ca_system_score_codex":0.00142297,"about_ca_system_score_gemma":0.002723489,"threshold_uncertainty_score":0.15177941},"labels":[],"label_agreement":null},{"id":"W4238855426","doi":"10.1128/iai.00519-09","title":"Role of Nod1 in Mucosal Dendritic Cells during <i>Salmonella</i> Pathogenicity Island 1-Independent <i>Salmonella enterica</i> Serovar Typhimurium Infection","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Bundesministerium für Bildung und Forschung","keywords":"NOD1; Biology; Microbiology; Lamina propria; Salmonella; Salmonella enterica; NOD2; Intracellular parasite; Pathogen; Innate immune system; Immune system; CD11c; Immunology; Virology; Bacteria; Phenotype; Epithelium","score_opus":0.004745938384297343,"score_gpt":0.2068838698105929,"score_spread":0.20213793142629555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238855426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99649256,0.0010859634,0.001016354,0.00008258203,0.000021072208,0.000018614752,0.0002515646,0.000046985304,0.0009842851],"genre_scores_gemma":[0.9980288,0.00024979512,0.0005120338,0.00003126296,0.0000065307995,0.000019997422,0.00017522681,0.00000741762,0.0009688264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998337,0.00003115503,0.000013943,0.000040013234,0.000026262025,0.000054937664],"domain_scores_gemma":[0.99986184,0.000015671194,0.00004071382,0.000014706065,0.00001776492,0.000049264992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001855903,0.00029238494,0.00021076245,0.00014173088,0.00015149615,0.00027851833,0.00014506876,0.00032263112,0.0007389424],"category_scores_gemma":[0.00013502715,0.000104478204,0.00017490935,0.0000744043,0.00028486917,0.00018248385,0.00023136545,0.0005740766,0.00029126063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020381642,0.00001721236,0.0004414804,0.000027387094,0.0000013120617,0.000086044,0.000014280657,0.000018518103,0.9987307,0.000038531452,0.000016823227,0.00040391902],"study_design_scores_gemma":[0.000043184995,0.0006106278,0.023611547,0.00001791959,0.000017261951,0.00093039585,0.00019251929,0.0008865648,0.9716163,0.000111614114,0.0019552258,0.0000068332824],"about_ca_topic_score_codex":0.00022411424,"about_ca_topic_score_gemma":0.00024691626,"teacher_disagreement_score":0.0007389424,"about_ca_system_score_codex":0.00024655164,"about_ca_system_score_gemma":0.00016896742,"threshold_uncertainty_score":0.002472043},"labels":[],"label_agreement":null},{"id":"W4239479327","doi":"10.1016/j.cyto.2009.07.165","title":"The role of CCL5/RANTES in regulating nutrient receptor traffiking, metabolism and protein expression in activated T cells","year":2009,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Eotaxin; Chemokine; CCL5; CXCL1; Lipopolysaccharide; CCL3; CCL2; Inflammation; CXCL2; Immunology; Tumor necrosis factor alpha; Immune system; Chemistry; Biology; Chemokine receptor; T cell; IL-2 receptor","score_opus":0.0041059877977182285,"score_gpt":0.2026839901599279,"score_spread":0.19857800236220968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239479327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96769863,0.02413624,0.0038676795,0.00043589226,0.000054927965,0.000018844737,0.0002405407,0.00006246799,0.0034847297],"genre_scores_gemma":[0.99374926,0.002405639,0.0015742156,0.00004218418,0.000023942635,0.000014977262,0.000138187,0.000012725495,0.0020389115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976,0.00006814473,0.000022605336,0.000029270726,0.000039987663,0.00007994547],"domain_scores_gemma":[0.99990404,0.000013969164,0.0000218535,0.000012099476,0.000018750692,0.000029361983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003731046,0.00038162485,0.00020302237,0.00039617578,0.0004454326,0.0010460604,0.00027068786,0.00037798117,0.00085909624],"category_scores_gemma":[0.00020946967,0.00015688779,0.00029510283,0.0001748435,0.00039253486,0.0008131965,0.00041227214,0.0004132107,0.0002600379],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010326159,0.00002620603,0.0018600961,0.00011207015,0.00001566836,0.00031180246,0.00007933038,0.0002865758,0.98600686,0.0016108641,0.000105060804,0.008552901],"study_design_scores_gemma":[0.00006154246,0.0005837689,0.052253153,0.00007400888,0.000089688954,0.0011096299,0.00056680135,0.0055912966,0.9288675,0.0010513488,0.009713164,0.000038096765],"about_ca_topic_score_codex":0.0013314805,"about_ca_topic_score_gemma":0.0025204157,"teacher_disagreement_score":0.0013314805,"about_ca_system_score_codex":0.0006423429,"about_ca_system_score_gemma":0.00036537816,"threshold_uncertainty_score":0.004660547},"labels":[],"label_agreement":null},{"id":"W4240221718","doi":"10.3410/f.718478374.793498937","title":"Faculty Opinions recommendation of Structural basis for outer membrane lipopolysaccharide insertion.","year":2014,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Lipopolysaccharide; Basis (linear algebra); Bacterial outer membrane; Chemistry; Computer science; Computational biology; Biology; Medicine; Mathematics; Biochemistry; Internal medicine; Gene; Geometry","score_opus":0.0243531586336329,"score_gpt":0.32912653746988924,"score_spread":0.3047733788362563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240221718","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019878185,0.0002315891,0.00005536559,0.00010083097,0.00003717463,0.0000107434425,0.998473,0.00021293541,0.0006796501],"genre_scores_gemma":[0.00078173005,0.00017570535,0.0002544805,0.0001009814,0.000011969781,0.000043824115,0.9978116,0.00004982208,0.00076994195],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99865985,0.00017676115,0.00017109585,0.0004278473,0.0003638433,0.00020058757],"domain_scores_gemma":[0.99659497,0.0010267724,0.00052496354,0.00056667434,0.00082738843,0.00045927815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012740867,0.002395051,0.0019685088,0.004181356,0.000814381,0.0030183985,0.002849698,0.0029444068,0.08613145],"category_scores_gemma":[0.009329476,0.00069706456,0.0022495955,0.005047291,0.00043552322,0.0015361945,0.0017993768,0.0020555172,0.08008739],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019151147,0.000033215496,0.0024428042,0.0018243862,0.0000977686,0.00003398596,0.000015397502,0.0002548872,0.00025707355,0.00035872136,0.9909615,0.0035287158],"study_design_scores_gemma":[0.0005789164,0.00004085405,0.010549128,0.0008070421,0.00018783439,0.00012417937,0.00005389383,0.0008044617,0.000749652,0.0013609417,0.98470163,0.000041538744],"about_ca_topic_score_codex":0.021671727,"about_ca_topic_score_gemma":0.045916606,"teacher_disagreement_score":0.08613145,"about_ca_system_score_codex":0.0016431186,"about_ca_system_score_gemma":0.0037733768,"threshold_uncertainty_score":0.2881384},"labels":[],"label_agreement":null},{"id":"W4241566970","doi":"10.1159/000230308","title":"Cellular Immunity","year":2009,"lang":"en","type":"article","venue":"International Archives of Allergy and Applied Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Public Health Service; Indigenous and Northern Affairs Canada; Commonwealth Foundation","keywords":"Immunology; Cellular immunity; Immunity; Medicine; Biology; Immune system","score_opus":0.005261579579752309,"score_gpt":0.20509038782895941,"score_spread":0.1998288082492071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241566970","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06810917,0.113914244,0.021138983,0.017966688,0.029565401,0.00067860517,0.004560772,0.0028712105,0.7411949],"genre_scores_gemma":[0.2692882,0.031994153,0.0062149717,0.007316168,0.005783642,0.00048180608,0.0037484453,0.00019358535,0.674979],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99942183,0.00008699678,0.0000284294,0.00013020876,0.00019994332,0.00013258531],"domain_scores_gemma":[0.9997203,0.000026103842,0.000022597369,0.00006481677,0.00008763046,0.00007859325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042176002,0.00091099,0.00060735975,0.00076336577,0.00059077266,0.001891708,0.00057561975,0.0010072289,0.09395453],"category_scores_gemma":[0.0004307328,0.00022761774,0.0005808638,0.00030335723,0.0005678734,0.0007717016,0.0013070456,0.0020638038,0.039802138],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090366846,0.00040958665,0.0015757245,0.0015903634,0.00014443109,0.0006696411,0.00029430562,0.00022806117,0.34931353,0.049628403,0.20684929,0.38839313],"study_design_scores_gemma":[0.00009674259,0.0003460732,0.0027552815,0.00016309074,0.000049674825,0.0008875457,0.0001474116,0.00018276605,0.037672248,0.0058793044,0.9518064,0.0000135706705],"about_ca_topic_score_codex":0.00018141083,"about_ca_topic_score_gemma":0.00024684094,"teacher_disagreement_score":0.09395453,"about_ca_system_score_codex":0.0005301112,"about_ca_system_score_gemma":0.0006702882,"threshold_uncertainty_score":0.31430924},"labels":[],"label_agreement":null},{"id":"W4243916844","doi":"10.3410/f.1027246.329548","title":"Faculty Opinions recommendation of Response to Staphylococcus aureus requires CD36-mediated phagocytosis triggered by the COOH-terminal cytoplasmic domain.","year":2005,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Staphylococcus aureus; Phagocytosis; CD36; Cytoplasm; Terminal (telecommunication); Chemistry; Microbiology; Domain (mathematical analysis); Cell biology; Computer science; Biology; Bacteria; Biochemistry; Computer network; Receptor; Genetics","score_opus":0.018348024192084398,"score_gpt":0.32226629567619547,"score_spread":0.30391827148411105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243916844","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00040471318,0.00018800281,0.000048840848,0.000077754594,0.000024785259,0.000014516561,0.9984861,0.00024077317,0.0005146453],"genre_scores_gemma":[0.0008119862,0.0001246594,0.00024387655,0.000035951693,0.0000054627076,0.00003769581,0.9981509,0.000023757588,0.00056569127],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99865866,0.00020017017,0.0002098744,0.00037366568,0.00040151054,0.00015611065],"domain_scores_gemma":[0.9970806,0.0008371509,0.00049710047,0.0005759512,0.00069164677,0.0003174598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011998855,0.0024703837,0.0015858979,0.0036950975,0.00066732086,0.0022183836,0.0023406302,0.0024524445,0.029339392],"category_scores_gemma":[0.007580222,0.00066265225,0.0018149405,0.0048484546,0.00026788787,0.0009219179,0.0010471132,0.0013517927,0.032578427],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003894189,0.000067414265,0.003913221,0.0027504142,0.00019781153,0.00005420196,0.000023950117,0.00058587576,0.00058735517,0.00029546357,0.9838663,0.0072685494],"study_design_scores_gemma":[0.0007500538,0.00008302999,0.03013546,0.0008306817,0.0003429359,0.00017066716,0.00008635236,0.002138321,0.0021410184,0.0008784301,0.9623717,0.00007129225],"about_ca_topic_score_codex":0.03204164,"about_ca_topic_score_gemma":0.060828906,"teacher_disagreement_score":0.03204164,"about_ca_system_score_codex":0.0014418255,"about_ca_system_score_gemma":0.0033636957,"threshold_uncertainty_score":0.098150074},"labels":[],"label_agreement":null},{"id":"W4244323346","doi":"10.1515/iupac.84.0694","title":"Immune Response","year":2016,"lang":"en","type":"dataset","venue":"IUPAC Standards Online","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Glossary; Immunotoxicology; Immunology; Medicine; Immune system; Philosophy; Linguistics","score_opus":0.009505123422672299,"score_gpt":0.3547245266033842,"score_spread":0.3452194031807119,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244323346","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000269068,0.00038999674,0.00008890632,0.00013779433,0.000052615054,0.000026195856,0.9968876,0.00015038633,0.0019974688],"genre_scores_gemma":[0.0012412369,0.0003765449,0.00044202048,0.0002865504,0.000025755102,0.00015487615,0.9954781,0.000041383002,0.001953477],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984054,0.0002546351,0.00031643038,0.00050536165,0.00032089156,0.00019729362],"domain_scores_gemma":[0.996816,0.0009142787,0.0005530959,0.0006335799,0.0008481398,0.000234936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012419724,0.0013676494,0.0013740571,0.0026310908,0.0007212056,0.002740676,0.0021280807,0.0017941968,0.07480326],"category_scores_gemma":[0.009760076,0.000494213,0.0017639709,0.003955067,0.0002672124,0.0014426255,0.001704445,0.0020480081,0.06589125],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030985818,0.000034962155,0.007391504,0.0034770183,0.000118245785,0.000043273652,0.000035225414,0.0003242022,0.00018645548,0.000933503,0.97305965,0.014086068],"study_design_scores_gemma":[0.00023052556,0.000036159232,0.013736472,0.0013278734,0.00009379089,0.00016669549,0.00006459286,0.00022086702,0.0002937902,0.0012958775,0.9825052,0.000028151413],"about_ca_topic_score_codex":0.0130254,"about_ca_topic_score_gemma":0.023689928,"teacher_disagreement_score":0.07480326,"about_ca_system_score_codex":0.0015912327,"about_ca_system_score_gemma":0.002566791,"threshold_uncertainty_score":0.25024182},"labels":[],"label_agreement":null},{"id":"W4244384861","doi":"10.21203/rs.3.rs-110973/v2","title":"Exposures to 2,4-Dichlorophenoxyacetic acid with or without endotoxin upregulate small cell lung cancer pathway","year":2021,"lang":"en","type":"preprint","venue":"Research Square","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Downregulation and upregulation; Lung cancer; 2,4-Dichlorophenoxyacetic acid; Chemistry; Cancer research; Cell; Cell biology; Biology; Medicine; Biochemistry; Internal medicine; Botany","score_opus":0.03621496784879035,"score_gpt":0.3336255892712095,"score_spread":0.29741062142241914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244384861","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97987694,0.0025418615,0.0077979453,0.0006611703,0.0004402023,0.00008049461,0.0021225119,0.00032986773,0.0061489264],"genre_scores_gemma":[0.97314554,0.001664715,0.003665619,0.00023192517,0.0000616664,0.00010196841,0.0034061852,0.00007283658,0.017649474],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99968255,0.000046541227,0.000016248845,0.000058652335,0.00006370216,0.00013234296],"domain_scores_gemma":[0.99990046,0.00002163261,0.00001621537,0.00001860797,0.000012889389,0.00003020876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015207869,0.0005187221,0.00031371036,0.00046552822,0.0003045201,0.00047687467,0.0001964389,0.00048440055,0.0061745984],"category_scores_gemma":[0.00014020056,0.00019351923,0.0004209693,0.0003354766,0.00035397624,0.00028431645,0.00029908208,0.0008405385,0.001473924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000374452,0.000055390185,0.00012123068,0.000028481958,0.0000057955845,0.000055486358,0.000015175463,0.000025267307,0.99834895,0.00008886309,0.00013563526,0.00074522494],"study_design_scores_gemma":[0.000024031466,0.0002555031,0.0047161886,0.000004719218,0.000010923012,0.00010938414,0.000058657708,0.00021927575,0.99226344,0.00008248854,0.00225104,0.000004396102],"about_ca_topic_score_codex":0.001356655,"about_ca_topic_score_gemma":0.0015899757,"teacher_disagreement_score":0.0061745984,"about_ca_system_score_codex":0.000296338,"about_ca_system_score_gemma":0.00042442192,"threshold_uncertainty_score":0.02065605},"labels":[],"label_agreement":null},{"id":"W4245518047","doi":"10.1016/b978-012373944-5.00196-6","title":"Lipopolysaccharides (Endotoxins)","year":2009,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Lipopolysaccharide; Innate immune system; Bacterial outer membrane; Biogenesis; Cell biology; Immune system; Microbiology; Lipid A; Septic shock; Bacteria; Inflammation; Biology; Sepsis; Chemistry; Immunology; Biochemistry; Escherichia coli","score_opus":0.01102043577421812,"score_gpt":0.22343570362545842,"score_spread":0.2124152678512403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245518047","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011587712,0.1114331,0.0054127085,0.0011967284,0.0028960814,0.000044012144,0.00035000336,0.0003287446,0.8771797],"genre_scores_gemma":[0.0021034272,0.042058177,0.0020522075,0.000452397,0.00031606745,0.00003904098,0.00022992818,0.000063067586,0.9526857],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998913,0.000006853775,0.000006456154,0.00002292792,0.00006236117,0.00001020864],"domain_scores_gemma":[0.9999542,0.0000132897485,0.0000042150537,0.000006394333,0.000014853792,0.0000070447973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001775588,0.0013551106,0.000618627,0.0013068869,0.0005008254,0.0017972566,0.0005350268,0.0010338662,0.0817029],"category_scores_gemma":[0.00018900783,0.0002943004,0.00027641133,0.0017251406,0.00054565904,0.0019202543,0.0010505074,0.0015203375,0.07959494],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043445187,0.000077782286,0.00009369808,0.00059853954,0.0000075668186,0.00020996733,0.00018647475,0.0003174182,0.009966849,0.04643818,0.16760044,0.77445966],"study_design_scores_gemma":[0.0000024238238,0.000013879593,0.00010969672,0.000121792575,0.0000027514625,0.00014274495,0.0000295631,0.000030954365,0.0006942365,0.004607598,0.99424136,0.0000030136562],"about_ca_topic_score_codex":0.001494389,"about_ca_topic_score_gemma":0.0027794193,"teacher_disagreement_score":0.0817029,"about_ca_system_score_codex":0.0005998545,"about_ca_system_score_gemma":0.00057467306,"threshold_uncertainty_score":0.27332342},"labels":[],"label_agreement":null},{"id":"W4246638965","doi":"10.1515/iupac.84.0807","title":"Kupffer Cell","year":2016,"lang":"en","type":"dataset","venue":"IUPAC Standards Online","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Glossary; Immunotoxicology; Immunology; Medicine; Immune system; Philosophy; Linguistics","score_opus":0.00813394921693155,"score_gpt":0.3445009511130453,"score_spread":0.33636700189611374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246638965","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013288093,0.0010166656,0.00025569403,0.0001946591,0.00008657697,0.000040472805,0.99419314,0.00036041034,0.002523688],"genre_scores_gemma":[0.0047051874,0.0007659332,0.0008831536,0.00030433454,0.000033845277,0.00017763616,0.9907917,0.000077177196,0.0022611436],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991596,0.0001157013,0.00014892258,0.00025517397,0.00016530133,0.00015537703],"domain_scores_gemma":[0.9981243,0.000514891,0.00034805245,0.00040920704,0.00041434247,0.00018921513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090497255,0.0009120239,0.0011514297,0.0030080085,0.00081450905,0.0025304193,0.0013724301,0.0011127732,0.048470557],"category_scores_gemma":[0.0052762437,0.0004665362,0.0011850004,0.0037250374,0.00026592967,0.0013930771,0.0014912431,0.0013517097,0.041207258],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070988893,0.000049219885,0.021362187,0.0045679747,0.00019840589,0.0001639274,0.000077413955,0.0005841665,0.00086495,0.0018092553,0.94237196,0.027240634],"study_design_scores_gemma":[0.000303946,0.00004786311,0.024851808,0.0012305786,0.00018948686,0.00047289135,0.00012141856,0.00049038284,0.001166994,0.003144862,0.9679364,0.000043443168],"about_ca_topic_score_codex":0.009133103,"about_ca_topic_score_gemma":0.01694825,"teacher_disagreement_score":0.048470557,"about_ca_system_score_codex":0.0011295629,"about_ca_system_score_gemma":0.0020941922,"threshold_uncertainty_score":0.16215014},"labels":[],"label_agreement":null},{"id":"W4247791818","doi":"10.4081/mrm.2015.290","title":"Effect of inhaled hydrosoluble curcumin on inflammatory markers in broncho-alveolar lavage fluid of horses with LPS-induced lung neutrophilia","year":2015,"lang":"en","type":"article","venue":"Multidisciplinary Respiratory Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Neutrophilia; Medicine; Bronchoalveolar lavage; Lung; Curcumin; Pathology; Immunology; Internal medicine; Pharmacology","score_opus":0.018794097930085893,"score_gpt":0.2862704542970629,"score_spread":0.267476356366977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247791818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990101,0.0006507337,0.00010762664,0.00003863232,0.000018628689,0.000034744837,0.00003885371,0.000006999957,0.00009378047],"genre_scores_gemma":[0.9978255,0.00065656396,0.0006307818,0.0000598989,0.000029644048,0.000073714364,0.000112053465,0.0000033600988,0.000608608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985313,0.0000339035,0.000014086416,0.00003199271,0.000029970195,0.000037018453],"domain_scores_gemma":[0.99977595,0.000052291438,0.000057134162,0.000016815058,0.000027940225,0.00006993031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025496533,0.00033563288,0.0006381104,0.00019531698,0.000150411,0.00021889854,0.00018325071,0.00034746286,0.0009718609],"category_scores_gemma":[0.0003280287,0.00015790007,0.00030105573,0.00005978482,0.00038263682,0.0002307077,0.00020107413,0.00050239393,0.00018965681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.024901431,0.002437426,0.0032078128,0.00039138348,0.000066418244,0.00031185008,0.00020379123,0.00015710267,0.9528796,0.000016701535,0.00011056621,0.015315898],"study_design_scores_gemma":[0.0014524047,0.17524932,0.084077865,0.00010222268,0.00043227396,0.0008466266,0.00069687073,0.0016197107,0.7319153,0.00005833511,0.0035032344,0.000045910972],"about_ca_topic_score_codex":0.00042672417,"about_ca_topic_score_gemma":0.0009378278,"teacher_disagreement_score":0.0009718609,"about_ca_system_score_codex":0.00019981788,"about_ca_system_score_gemma":0.00024154256,"threshold_uncertainty_score":0.003251195},"labels":[],"label_agreement":null},{"id":"W4249465801","doi":"10.21203/rs.3.rs-110973/v1","title":"Exposures to 2,4-Dichlorophenoxyacetic Acid With or Without Endotoxin Upregulate Small Cell Lung Cancer Pathway","year":2020,"lang":"en","type":"preprint","venue":"Research Square","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Downregulation and upregulation; 2,4-Dichlorophenoxyacetic acid; Lung cancer; Chemistry; Cancer; Cancer research; Cell biology; Oncology; Medicine; Biology; Internal medicine; Biochemistry; Botany","score_opus":0.047628038382719284,"score_gpt":0.33916325389605945,"score_spread":0.29153521551334016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249465801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9804971,0.0023847525,0.0077039474,0.0006274591,0.00042309525,0.00008240454,0.002060764,0.0003169535,0.005903363],"genre_scores_gemma":[0.97359306,0.001593326,0.0037568477,0.00022751765,0.00006114171,0.00010731401,0.0033955653,0.00006867074,0.017196633],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99967134,0.00004903065,0.000017169703,0.00006046243,0.000065137,0.00013680338],"domain_scores_gemma":[0.9998956,0.000022918706,0.000016746477,0.000019458126,0.000013439154,0.00003183003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001569388,0.000530856,0.00031121817,0.00047867082,0.0003099606,0.00047174803,0.00020351408,0.0004893102,0.006201959],"category_scores_gemma":[0.00014319594,0.00019591609,0.000424994,0.00034525155,0.00036826247,0.00028689293,0.00029857468,0.0008468828,0.0014471993],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037881263,0.000056958645,0.00011670171,0.00002738805,0.0000055951195,0.000054250893,0.000014953125,0.00002447792,0.99842274,0.00008548027,0.00012493774,0.00068766274],"study_design_scores_gemma":[0.000023784367,0.00025967983,0.0045293006,0.0000045073225,0.000010500697,0.000106265994,0.00005794594,0.00021486987,0.99262357,0.00007632294,0.0020889356,0.0000042983784],"about_ca_topic_score_codex":0.0014114361,"about_ca_topic_score_gemma":0.0016472866,"teacher_disagreement_score":0.006201959,"about_ca_system_score_codex":0.00030183056,"about_ca_system_score_gemma":0.00043586487,"threshold_uncertainty_score":0.020747602},"labels":[],"label_agreement":null},{"id":"W4251775574","doi":"10.1016/s0378-1097(01)00445-1","title":"Selection of peptides that bind to the core oligosaccharide of R-form LPS from a phage-displayed heptapeptide library","year":2001,"lang":"en","type":"article","venue":"FEMS Microbiology Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Calgary","keywords":"Biopanning; Phage display; Oligosaccharide; Mimotope; Peptide library; Molecular biology; Biology; Lipopolysaccharide; Ligand (biochemistry); Phagemid; Lectin; Panning (audio); Biochemistry; Bacteriophage; Chemistry; Escherichia coli; Peptide; Peptide sequence; Receptor; Gene","score_opus":0.014150549834938332,"score_gpt":0.21602826923143068,"score_spread":0.20187771939649235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251775574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907101,0.0003283289,0.007126526,0.000058316084,0.000018637038,0.00016423453,0.00028244857,0.000066670866,0.0012446698],"genre_scores_gemma":[0.97655517,0.00047571005,0.016387599,0.00016722755,0.000021797889,0.00015599471,0.0020315466,0.000061870065,0.0041432283],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977607,0.000040695963,0.000016056234,0.00003684275,0.000062191204,0.00006808874],"domain_scores_gemma":[0.99972755,0.00008330791,0.000039949355,0.000026120839,0.00004427345,0.000078919795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025534848,0.00053795276,0.00061122637,0.00035232556,0.00019640106,0.00045269803,0.00033244007,0.00035299276,0.0013094946],"category_scores_gemma":[0.00037486924,0.0002121415,0.0002998601,0.00037638482,0.00015681883,0.00019690958,0.000408146,0.00070515356,0.0008290052],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012482962,0.000075805605,0.00033551425,0.000020087331,0.0000041303742,0.00014344265,0.00002035315,0.00010599619,0.9973085,0.000028406184,0.00003343076,0.001799597],"study_design_scores_gemma":[0.00006425609,0.0011773932,0.00820555,0.000012308176,0.000036656354,0.0014001792,0.000090232985,0.003063879,0.98395175,0.00005603062,0.001924293,0.000017355524],"about_ca_topic_score_codex":0.00026658992,"about_ca_topic_score_gemma":0.00047411365,"teacher_disagreement_score":0.0013094946,"about_ca_system_score_codex":0.00017635492,"about_ca_system_score_gemma":0.0001636812,"threshold_uncertainty_score":0.0043806434},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W4251929638","doi":"10.1016/j.healun.2020.01.796","title":"IL-17 Receptor on Donor Cells Regulates Acute and Chronic Lung Allograft Rejection Potentiated by Repeated Endotoxin Inhalations","year":2020,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Hospital; University Health Network","funders":"","keywords":"Lung; Lung transplantation; Medicine; Transplantation; Airway; Pathology; Immunology; Internal medicine; Surgery","score_opus":0.005336526513554866,"score_gpt":0.2146490815870706,"score_spread":0.20931255507351573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251929638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990049,0.0003618324,0.00019150831,0.000026864573,0.000034675773,0.00000730533,0.000028048697,0.000010889863,0.00033387318],"genre_scores_gemma":[0.99842876,0.00022315494,0.00027171464,0.00005212112,0.00005082297,0.000017678289,0.000113337854,0.000014006913,0.00082839956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989999,0.00024277903,0.00009472945,0.000101535414,0.0001842446,0.000376878],"domain_scores_gemma":[0.9992895,0.00013770782,0.00015426088,0.00013007164,0.000047395155,0.00024094623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060548563,0.000688298,0.00069219957,0.00040595248,0.0002575343,0.00074773614,0.00031701606,0.000566218,0.0019805196],"category_scores_gemma":[0.0006494488,0.00034148266,0.0005257832,0.00017851267,0.0006688604,0.0005418897,0.0005759732,0.0025213521,0.0006145712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026857415,0.00040833117,0.0015480843,0.000039703587,0.000010885747,0.0003185362,0.000041710115,0.00005584236,0.99331576,0.0001086705,0.000034283836,0.001432521],"study_design_scores_gemma":[0.00039535735,0.005449111,0.117451586,0.000053861462,0.00020568674,0.0023975666,0.0005140472,0.0017941615,0.86999786,0.00029114317,0.0014167448,0.000032970627],"about_ca_topic_score_codex":0.00013446245,"about_ca_topic_score_gemma":0.00031678582,"teacher_disagreement_score":0.0019805196,"about_ca_system_score_codex":0.00022560189,"about_ca_system_score_gemma":0.00030511382,"threshold_uncertainty_score":0.0066254735},"labels":[],"label_agreement":null},{"id":"W4254651173","doi":"10.1042/bj3600285","title":"Ectopic expression of interferon regulatory factor-1 potentiates granulocytic differentiation","year":2001,"lang":"en","type":"article","venue":"Biochemical Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Transcription factor; Biology; Ectopic expression; IRF8; Haematopoiesis; Cell biology; Cellular differentiation; Interferon regulatory factors; Myeloid; Progenitor cell; Cytokine; Immunology; Molecular biology; Stem cell; Cell culture; Gene; Genetics","score_opus":0.009827126921214364,"score_gpt":0.22262341687003379,"score_spread":0.2127962899488194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254651173","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950659,0.001303459,0.0015367153,0.000070616465,0.000020813082,0.000028887036,0.0002559873,0.00006728689,0.0016502711],"genre_scores_gemma":[0.995742,0.0007274492,0.0017836808,0.000036951813,0.000005515566,0.00001762547,0.00033327498,0.000016792024,0.0013367124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998411,0.000038024526,0.000015502763,0.00002588427,0.000035714198,0.000043754528],"domain_scores_gemma":[0.99991226,0.000023420169,0.000023544279,0.000014450229,0.0000065119984,0.000019747222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014799234,0.00031901253,0.00022134821,0.00020499811,0.00007873345,0.0002498897,0.000114237686,0.00019408301,0.0008278054],"category_scores_gemma":[0.000095729156,0.00010394358,0.0001925981,0.00013927413,0.00019604502,0.00011550447,0.00025594322,0.00042199387,0.0003804035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005768757,0.00001424622,0.00008227458,0.000021390331,0.0000013032294,0.00003741036,0.000008403451,0.000030870655,0.9991141,0.0000493061,0.000011494757,0.0005714943],"study_design_scores_gemma":[0.000014016463,0.00015055874,0.0019409427,0.00000699316,0.000008488614,0.00016068322,0.000016007807,0.00046032193,0.995053,0.0000350505,0.002151532,0.000002427223],"about_ca_topic_score_codex":0.00028248076,"about_ca_topic_score_gemma":0.0005008963,"teacher_disagreement_score":0.0008278054,"about_ca_system_score_codex":0.00021844462,"about_ca_system_score_gemma":0.00016951885,"threshold_uncertainty_score":0.002769351},"labels":[],"label_agreement":null},{"id":"W4254666654","doi":"10.1111/j.1939-1676.2006.tb00717.x","title":"The Effect of Glucocorticoids on Canine Lymphocyte Marker Expression and Apoptosis","year":2006,"lang":"en","type":"article","venue":"Journal of Veterinary Internal Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"University of Guelph","keywords":"Medicine; CD90; Apoptosis; Lymphocyte; Immunology; CD3; CD8; DNA fragmentation; Canine Lymphoma; Glucocorticoid; Prednisolone; Flow cytometry; Internal medicine; Immune system; Endocrinology; Biology; Lymphoma; In vitro; CD44; Programmed cell death","score_opus":0.006599854496796881,"score_gpt":0.25530836957920955,"score_spread":0.24870851508241268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254666654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985393,0.001084815,0.00005988187,0.000015229134,0.0000063252473,0.000015863592,0.000083901185,0.0000035012176,0.000191156],"genre_scores_gemma":[0.99898714,0.00033815892,0.00017457885,0.000024713836,0.000012823301,0.000021440976,0.00016698783,0.0000012808127,0.00027279303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996418,0.00011181145,0.000025844753,0.000071799885,0.00008601389,0.00006266572],"domain_scores_gemma":[0.9994923,0.00015058783,0.00017613581,0.000035064397,0.000051191317,0.00009474776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003645861,0.0001788512,0.00023449505,0.00020569572,0.00009661836,0.00027292504,0.00012494231,0.00024741917,0.0011969028],"category_scores_gemma":[0.00048492022,0.000087109125,0.00016411737,0.00012015389,0.00025823456,0.0001358958,0.00010323287,0.00030980192,0.00014630191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.051997136,0.0019409026,0.06750376,0.00042821243,0.00013787234,0.00035094668,0.00014908663,0.00038037344,0.8397121,0.00009692226,0.00037246483,0.03693033],"study_design_scores_gemma":[0.0012916123,0.10074706,0.42479438,0.00007071011,0.0004316312,0.0021468757,0.0003575183,0.00083246984,0.46363595,0.00016033213,0.005504765,0.00002668143],"about_ca_topic_score_codex":0.00032358916,"about_ca_topic_score_gemma":0.0006359111,"teacher_disagreement_score":0.0011969028,"about_ca_system_score_codex":0.0003179547,"about_ca_system_score_gemma":0.00018149214,"threshold_uncertainty_score":0.0040040016},"labels":[],"label_agreement":null},{"id":"W4280654333","doi":"10.2147/jir.s357866","title":"Toll-like Interleukin -1 Receptor Regulator (TILRR) Protein, a Major Modulator of Inflammation, is Expressed in Normal Human and Macaque Tissues and PBMCs","year":2022,"lang":"en","type":"article","venue":"Journal of Inflammation Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Canadian Institutes of Health Research","keywords":"Biology; Inflammation; Western blot; Peripheral blood mononuclear cell; Cecum; Ileum; Lamina propria; Uterus; Immunology; Internal medicine; Endocrinology; Pathology; Medicine; Epithelium; Gene; In vitro","score_opus":0.0208629863400169,"score_gpt":0.30378935839745214,"score_spread":0.28292637205743526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4280654333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98186755,0.010331924,0.0030858887,0.00019970696,0.00007462206,0.000043968732,0.0017742286,0.00011212422,0.0025098782],"genre_scores_gemma":[0.9902215,0.0020148854,0.0022881438,0.00019408477,0.00003845476,0.00009379699,0.0021988787,0.000020165511,0.0029299571],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996124,0.00004889883,0.00003042911,0.00015803534,0.00006879794,0.000081556485],"domain_scores_gemma":[0.99982566,0.000025941525,0.000055540986,0.00002872706,0.0000360362,0.00002817242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020908834,0.0002369945,0.00026169408,0.00038239668,0.00027906641,0.00034207536,0.000112747686,0.0002868861,0.0022108553],"category_scores_gemma":[0.00033789518,0.00012515741,0.00027040904,0.00021051,0.00024645645,0.00017431249,0.0002414592,0.00032277757,0.00053520553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027667114,0.000019021612,0.0035305151,0.0001291229,0.00001566032,0.0001987509,0.000104419516,0.00001853956,0.99298793,0.00005206375,0.00017043394,0.0024970295],"study_design_scores_gemma":[0.00008907832,0.0017553498,0.3195314,0.00020303825,0.00020760116,0.011846101,0.001302847,0.001490377,0.62709,0.00036604714,0.03607485,0.000043320582],"about_ca_topic_score_codex":0.0011727777,"about_ca_topic_score_gemma":0.0012445848,"teacher_disagreement_score":0.0022108553,"about_ca_system_score_codex":0.00023075388,"about_ca_system_score_gemma":0.00019908191,"threshold_uncertainty_score":0.0073960423},"labels":[],"label_agreement":null},{"id":"W4281552996","doi":"10.1159/000524461","title":"Regulation of TLR10 Expression and Its Role in Chemotaxis of Human Neutrophils","year":2022,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Cell biology; Biology; Chemotaxis; Innate immune system; TLR4; TLR2; Pattern recognition receptor; Gene knockdown; Immunology; Immune system; Receptor; Signal transduction; Cell culture; Biochemistry","score_opus":0.010771830124834906,"score_gpt":0.24196250215388013,"score_spread":0.23119067202904522,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4281552996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98331106,0.00702132,0.0050453446,0.000395076,0.00010204485,0.00006829616,0.0011158945,0.000100723824,0.0028402524],"genre_scores_gemma":[0.9883867,0.0029386717,0.0030416443,0.00018827194,0.000017940132,0.00014214181,0.0010657103,0.000015846505,0.0042030574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997801,0.00004028512,0.000016640512,0.000044281478,0.000046237445,0.000072440635],"domain_scores_gemma":[0.9999348,0.000007730982,0.000018270941,0.000005263878,0.000017229002,0.000016701804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015596526,0.00024287203,0.00017980859,0.0001333104,0.0001547827,0.00023147468,0.00014603346,0.00025789844,0.0017551507],"category_scores_gemma":[0.000110598,0.00010999618,0.00027923117,0.00009024648,0.00015165904,0.00013008043,0.00018470951,0.00045309676,0.00055282813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023888185,0.000029201681,0.00035722394,0.00007777244,0.000004302343,0.000060488655,0.000017614488,0.000029053042,0.9975321,0.000052401814,0.00009357773,0.0015073419],"study_design_scores_gemma":[0.000045628196,0.00041697468,0.025279744,0.000033742093,0.00002949126,0.0006940494,0.000109193505,0.0009680585,0.9647992,0.00009392919,0.0075170803,0.000012901987],"about_ca_topic_score_codex":0.000834673,"about_ca_topic_score_gemma":0.00091233815,"teacher_disagreement_score":0.0017551507,"about_ca_system_score_codex":0.0003196985,"about_ca_system_score_gemma":0.00026892012,"threshold_uncertainty_score":0.0058715343},"labels":[],"label_agreement":null},{"id":"W4282014591","doi":"10.1152/ajplung.00073.2022","title":"Sensitive physiological readouts to evaluate countermeasures for lipopolysaccharide-induced lung alterations in mice","year":2022,"lang":"en","type":"article","venue":"American Journal of Physiology-Lung Cellular and Molecular Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"Fonds de Recherche du Québec - Santé; Mitacs; Canadian Institutes of Health Research; Fonds de recherche du Québec; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"Lipopolysaccharide; Lung; Lung volumes; Context (archaeology); Medicine; Pulmonary compliance; Compliance (psychology); Functional residual capacity; Inflammation; Internal medicine; Respiratory physiology; Cardiology; Anesthesia; Biology; Psychology","score_opus":0.010148711698833834,"score_gpt":0.26386208431845537,"score_spread":0.2537133726196215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282014591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93496513,0.006192006,0.049819082,0.0005648856,0.00054831844,0.0008967659,0.00347461,0.0009358379,0.0026032857],"genre_scores_gemma":[0.9311603,0.006049463,0.048962906,0.0010422538,0.00019499245,0.0032667036,0.0032090424,0.0001952366,0.005919099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998892,0.00015574052,0.00011605772,0.00027419417,0.00036181498,0.00020017475],"domain_scores_gemma":[0.9992143,0.00007622716,0.00029179864,0.000093577706,0.00012734142,0.0001967497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009557373,0.0013972311,0.0008227171,0.0014138712,0.00035442977,0.0005823727,0.00055081,0.001057753,0.002080332],"category_scores_gemma":[0.0005006641,0.00048471487,0.00070846797,0.0005148145,0.0007937438,0.0007641085,0.00068784493,0.003551903,0.0005775853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021429203,0.00016224246,0.0004114566,0.00006508773,0.000011877651,0.000021255271,0.00003157716,0.000061322025,0.9974197,0.000049978982,0.0000504619,0.0015007571],"study_design_scores_gemma":[0.000060546787,0.005236644,0.013964636,0.000041301926,0.00007490005,0.00013769529,0.00012319122,0.0012346851,0.9771698,0.00015992914,0.0017687972,0.000027767439],"about_ca_topic_score_codex":0.00029157737,"about_ca_topic_score_gemma":0.0007106216,"teacher_disagreement_score":0.002080332,"about_ca_system_score_codex":0.00038712574,"about_ca_system_score_gemma":0.00039990043,"threshold_uncertainty_score":0.0069593787},"labels":[],"label_agreement":null},{"id":"W4282830706","doi":"10.3390/vaccines10060927","title":"Kinome Analysis to Define Mechanisms of Adjuvant Action: PCEP Induces Unique Signaling at the Injection Site and Lymph Nodes","year":2022,"lang":"en","type":"article","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Kinome; Proinflammatory cytokine; Biology; Immunology; Adjuvant; Immune system; Cell biology; Signal transduction; Inflammation","score_opus":0.015089026042986356,"score_gpt":0.23911328933104165,"score_spread":0.2240242632880553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282830706","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90880686,0.0018082286,0.083730504,0.00026218215,0.00005116139,0.00026339258,0.001474463,0.00024480984,0.0033583916],"genre_scores_gemma":[0.9680029,0.0010524202,0.02617057,0.00015055691,0.000013449676,0.00028235806,0.00092672795,0.000026465892,0.0033744995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984956,0.000021440954,0.000011010155,0.000026981043,0.000049356655,0.0000417454],"domain_scores_gemma":[0.999835,0.000043644734,0.00004396549,0.000014936908,0.000039058654,0.000023316563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022441232,0.00035717437,0.0002258746,0.00046925692,0.00019024254,0.0003363573,0.00014226694,0.0003158326,0.0025055073],"category_scores_gemma":[0.00021990537,0.00011188244,0.0002717548,0.00020139628,0.00025456017,0.0005188363,0.00031177202,0.00071205373,0.0005471845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006858271,0.000012139709,0.00020847692,0.00004769866,0.0000026413556,0.000021630123,0.000010292043,0.0000972751,0.99810886,0.00013824485,0.000017650036,0.0012665608],"study_design_scores_gemma":[0.000007288483,0.00018528692,0.005890237,0.00000628644,0.000010441177,0.0001365824,0.000041107836,0.001973898,0.9899704,0.00028768939,0.0014849447,0.000005815604],"about_ca_topic_score_codex":0.00039980913,"about_ca_topic_score_gemma":0.0005819322,"teacher_disagreement_score":0.0025055073,"about_ca_system_score_codex":0.00033161073,"about_ca_system_score_gemma":0.00027256802,"threshold_uncertainty_score":0.008381784},"labels":[],"label_agreement":null},{"id":"W4282918318","doi":"10.1152/ajpcell.00088.2022","title":"Proteoglycans in Toll-like receptor responses and innate immunity","year":2022,"lang":"en","type":"review","venue":"American Journal of Physiology-Cell Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Environmental Health Sciences; Mallinckrodt Pharmaceuticals; National Institutes of Health; University of Texas Southwestern Medical Center","keywords":"Innate immune system; Extracellular matrix; Cell biology; Biology; Immune system; Innate lymphoid cell; Pattern recognition receptor; Toll-like receptor; Receptor; Neuroscience; Immunology; Genetics","score_opus":0.01938131517776168,"score_gpt":0.27924195983259154,"score_spread":0.25986064465482983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4282918318","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006614879,0.99801254,0.00010797973,0.0002433261,0.00046559845,0.0000032121711,0.00000946457,0.0000062880276,0.0010854233],"genre_scores_gemma":[0.0004341626,0.9977398,0.00014006002,0.0001689261,0.0003825157,0.0000049659466,0.000022908302,0.0000011363616,0.0011054802],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987924,0.000018341572,0.000016189191,0.000020934192,0.000049728827,0.000015517422],"domain_scores_gemma":[0.9998528,0.00004594177,0.000018393777,0.000004603012,0.00004746929,0.000030831055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004000585,0.0010081754,0.0009840961,0.0020542832,0.00033893148,0.0009949489,0.0007321328,0.0011777938,0.0038476703],"category_scores_gemma":[0.00040499505,0.00025567616,0.00032554136,0.002056703,0.00046751852,0.0015442829,0.0008159606,0.0017807982,0.0037642622],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009238795,0.00008260258,0.00017275952,0.010086811,0.000046367146,0.00027998618,0.0000807727,0.0003824821,0.0027216098,0.0065603685,0.05904761,0.92044634],"study_design_scores_gemma":[0.000010783372,0.00005811385,0.0005929139,0.0018036196,0.000033802375,0.000781044,0.000050856157,0.00005519873,0.00027804187,0.0026657945,0.9936579,0.000012020707],"about_ca_topic_score_codex":0.0006837812,"about_ca_topic_score_gemma":0.0012043449,"teacher_disagreement_score":0.0038476703,"about_ca_system_score_codex":0.0007142782,"about_ca_system_score_gemma":0.0010315551,"threshold_uncertainty_score":0.012871683},"labels":[],"label_agreement":null},{"id":"W4283837217","doi":"10.1159/000525548","title":"Endotoxemic Shock: A Molecular Phenotype in Sepsis","year":2022,"lang":"en","type":"review","venue":"˜The œNephron journals/Nephron journals","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iridian Spectral Technologies (Canada)","funders":"","keywords":"Sepsis; Medicine; Organ dysfunction; Phenotype; Shock (circulatory); Septic shock; Acute kidney injury; Inflammation; Narrative review; Immunology; Clinical phenotype; Intensive care medicine; Bioinformatics; Internal medicine; Gene; Biology; Genetics","score_opus":0.045485941055513096,"score_gpt":0.3272708094606402,"score_spread":0.28178486840512706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4283837217","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000571563,0.9995005,0.000024868097,0.00014933471,0.00010551412,0.0000011012437,0.0000035580597,0.0000013610675,0.00015661416],"genre_scores_gemma":[0.00078187295,0.9988072,0.000042469946,0.00011155362,0.00016658925,0.0000023509185,0.000007859006,4.171071e-7,0.000079761725],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997615,0.00005608356,0.000046147776,0.000041887117,0.00007577381,0.000018562301],"domain_scores_gemma":[0.9995896,0.00019179427,0.00009067404,0.000009347774,0.00009015444,0.000028355154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053523463,0.000721916,0.0013415407,0.002157075,0.00020811454,0.0010917817,0.0005561411,0.00097328506,0.001267993],"category_scores_gemma":[0.0009928283,0.00018612102,0.00034713195,0.0024884276,0.00068474346,0.00086639036,0.0005945273,0.0012887015,0.00066868257],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011065443,0.000035597077,0.000759497,0.034415893,0.00016878983,0.00038417595,0.00014143433,0.00027877372,0.0009752274,0.004294829,0.03207937,0.9263557],"study_design_scores_gemma":[0.000030154531,0.00019743404,0.0061929696,0.02890631,0.0005320014,0.010126387,0.00037078577,0.0001559318,0.0006305874,0.004879917,0.94792175,0.000055799246],"about_ca_topic_score_codex":0.0008884726,"about_ca_topic_score_gemma":0.0010125499,"teacher_disagreement_score":0.002157075,"about_ca_system_score_codex":0.0005409788,"about_ca_system_score_gemma":0.0010832337,"threshold_uncertainty_score":0.0042418838},"labels":[],"label_agreement":null},{"id":"W4286433050","doi":"10.1007/s00441-022-03671-4","title":"Toll-like receptor 10 has a role in human macrophage response against Streptococcus pneumoniae","year":2022,"lang":"en","type":"article","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Innate immune system; Streptococcus pneumoniae; Pattern recognition receptor; Macrophage; Immunology; Microbiology; Phagocytosis; Toll-like receptor; Immune system; Chlamydophila pneumoniae; TLR2; Chlamydia; In vitro; Chlamydiaceae","score_opus":0.028599784217293152,"score_gpt":0.3053646277488766,"score_spread":0.2767648435315835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286433050","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907732,0.0047703413,0.0010342363,0.00036612747,0.00008965822,0.000029537989,0.00022807988,0.000026341826,0.00268252],"genre_scores_gemma":[0.9942245,0.0011848898,0.0008539293,0.00009326184,0.000048277496,0.00002820985,0.00025839763,0.0000052725836,0.0033032424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980325,0.00006902171,0.000016312139,0.000016567867,0.000023450602,0.000071346614],"domain_scores_gemma":[0.999841,0.000046264693,0.000023474442,0.000017314766,0.000025155909,0.00004674456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044942406,0.00039186448,0.00022903409,0.00035091417,0.00021010876,0.00033842164,0.00017114119,0.00037521997,0.003158576],"category_scores_gemma":[0.00037318427,0.00017502715,0.00027808078,0.00011579495,0.00028177552,0.00021256445,0.00031282424,0.00042553988,0.0005808062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0035515567,0.0001530451,0.0034546459,0.00016005311,0.000014383298,0.0006542393,0.00012085465,0.00011575731,0.9836066,0.00037106033,0.00025361724,0.007544194],"study_design_scores_gemma":[0.0003696238,0.0042700074,0.14198834,0.00007457138,0.00010563713,0.0047330665,0.00086696044,0.001495531,0.82998943,0.00082802423,0.015242755,0.000035988865],"about_ca_topic_score_codex":0.00063018757,"about_ca_topic_score_gemma":0.00061035116,"teacher_disagreement_score":0.003158576,"about_ca_system_score_codex":0.00024129213,"about_ca_system_score_gemma":0.00029787977,"threshold_uncertainty_score":0.010566473},"labels":[],"label_agreement":null},{"id":"W4287577165","doi":"10.1073/pnas.2201146119","title":"Interferon-β regulates proresolving lipids to promote the resolution of acute airway inflammation","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Efferocytosis; Inflammation; Immunology; Phagocytosis; ARDS; Receptor; Lipid signaling; TLR9; Biology; Lung; Medicine; Internal medicine; Macrophage","score_opus":0.01938314265932226,"score_gpt":0.26890040088964934,"score_spread":0.24951725823032708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4287577165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9454292,0.03529815,0.011130489,0.00047900062,0.00024006754,0.00012842551,0.00045242504,0.00028256807,0.0065597156],"genre_scores_gemma":[0.9853544,0.0072222385,0.0041596266,0.00018879247,0.00008701013,0.000055613822,0.00030658775,0.000024658746,0.0026009395],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998185,0.000041976964,0.000025750142,0.000029920238,0.000041588657,0.000042225376],"domain_scores_gemma":[0.9998926,0.000008446417,0.00004312645,0.00000952131,0.000016405633,0.000029781932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025034999,0.0004909025,0.00021688563,0.00023291411,0.000099709774,0.0003120456,0.00010268934,0.00024567122,0.000938953],"category_scores_gemma":[0.00012787057,0.00011127131,0.00023228738,0.00007661868,0.00016758514,0.00017238571,0.00023637571,0.0005653441,0.0005580811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014965524,0.0000242509,0.0003328537,0.000056383633,0.0000059387407,0.00006720295,0.000010727407,0.000043055843,0.99566674,0.000111033325,0.00004736053,0.0034846712],"study_design_scores_gemma":[0.000091573755,0.00061220414,0.01719974,0.000055025244,0.00004566166,0.00064546335,0.00007019952,0.0009772638,0.9664383,0.00024704007,0.013608558,0.000008994729],"about_ca_topic_score_codex":0.00011006795,"about_ca_topic_score_gemma":0.00014219289,"teacher_disagreement_score":0.000938953,"about_ca_system_score_codex":0.00022281901,"about_ca_system_score_gemma":0.00012947567,"threshold_uncertainty_score":0.0031411052},"labels":[],"label_agreement":null},{"id":"W4289336382","doi":"10.1073/pnas.2111726119","title":"Lymph-derived chemokines direct early neutrophil infiltration in the lymph nodes upon <i>Staphylococcus aureus</i> skin infection","year":2022,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary","funders":"Canadian Institutes of Health Research; Government of Canada","keywords":"Lymph; Lymphatic system; CXCL1; Chemokine; Staphylococcus aureus; Lymph node; Immunology; CXCL2; Medicine; Innate lymphoid cell; Inflammation; High endothelial venules; Pathology; Biology; Innate immune system; Immune system; Chemokine receptor; Bacteria","score_opus":0.01881995592456037,"score_gpt":0.2560505312521921,"score_spread":0.23723057532763175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289336382","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895466,0.0034987242,0.002129606,0.00019682388,0.000103928316,0.000065150154,0.00055979344,0.0001305799,0.0037687973],"genre_scores_gemma":[0.9929261,0.0014006547,0.0014613987,0.00017551098,0.000043287215,0.00007138823,0.000518668,0.000024391244,0.0033786502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998388,0.000035049005,0.000012770148,0.000024124622,0.000027890546,0.00006136081],"domain_scores_gemma":[0.99993014,0.000011178351,0.00001934198,0.0000050406547,0.000012057748,0.000022325117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011974681,0.00033121897,0.00021304248,0.00015632332,0.00012751017,0.00032832,0.00009008664,0.00021684385,0.0021328481],"category_scores_gemma":[0.00010917515,0.00009339399,0.00019086993,0.00007231996,0.00020283353,0.0001830991,0.00018499188,0.0005473924,0.0005785035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026259467,0.000036810747,0.00026046098,0.00008045361,0.0000026205903,0.00007558897,0.000015623902,0.000034652563,0.9977157,0.000051275674,0.00014554338,0.0013186679],"study_design_scores_gemma":[0.000044587767,0.00080332527,0.02202893,0.000039644663,0.000018744055,0.00041515328,0.00009436899,0.0008942174,0.97157943,0.00007509401,0.003997317,0.000009201495],"about_ca_topic_score_codex":0.0005724953,"about_ca_topic_score_gemma":0.0007579983,"teacher_disagreement_score":0.0021328481,"about_ca_system_score_codex":0.0002826839,"about_ca_system_score_gemma":0.00022963191,"threshold_uncertainty_score":0.007135153},"labels":[],"label_agreement":null},{"id":"W4289711886","doi":"10.1101/2022.08.02.502487","title":"Coupling of protein condensates to ordered lipid domains determines functional membrane organization","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of General Medical Sciences; National Institutes of Health; Volkswagen Foundation; Hospital for Sick Children; Welch Foundation; Howard Hughes Medical Institute","keywords":"Lipid raft; Membrane; Lipid microdomain; Signal transducing adaptor protein; Biophysics; Transmembrane protein; Chemistry; Lipid bilayer; Cell biology; Coupling (piping); Signal transduction; Receptor; Biology; Biochemistry; Materials science","score_opus":0.010595859523887582,"score_gpt":0.20384229492121797,"score_spread":0.19324643539733038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289711886","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995978,0.0002819087,0.002702615,0.000058510992,0.000010382414,0.000011320525,0.00009780616,0.000034777015,0.000824845],"genre_scores_gemma":[0.998483,0.0000931189,0.00053592946,0.000016845976,0.0000047067815,0.0000058281626,0.00011988834,0.00001433384,0.00072628947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990237,0.000016861575,0.000005882644,0.000020924497,0.000029183908,0.000024834288],"domain_scores_gemma":[0.99988985,0.000024065945,0.000030472062,0.000010994208,0.000011871418,0.000032626434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001515022,0.00021239021,0.00014182119,0.00020173973,0.00017972512,0.0003651172,0.000105312305,0.00016245285,0.0014803277],"category_scores_gemma":[0.00019801287,0.00013963075,0.00011409725,0.00011273996,0.0003608875,0.0002038386,0.0002610412,0.00035184325,0.0003428344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002864626,0.0000034357206,0.00021604789,0.000008388359,0.0000017146219,0.000012038823,0.000004997895,0.000052251096,0.99937433,0.00012711233,0.000007989592,0.00016323726],"study_design_scores_gemma":[0.000005745947,0.000024098314,0.002742505,0.0000014370046,0.0000033052886,0.00003786904,0.000015537034,0.0012531406,0.995464,0.00010207903,0.0003486998,0.0000016062884],"about_ca_topic_score_codex":0.00037060998,"about_ca_topic_score_gemma":0.00044185482,"teacher_disagreement_score":0.0014803277,"about_ca_system_score_codex":0.00040501257,"about_ca_system_score_gemma":0.00014634432,"threshold_uncertainty_score":0.004952252},"labels":[],"label_agreement":null},{"id":"W4290759913","doi":"10.1093/infdis/jiac340","title":"Intestinal Injury in Ugandan Children Hospitalized With Malaria","year":2022,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Toronto General Hospital; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research; Women and Children's Health Research Institute; Canada Research Chairs; Children's Health Research Institute","keywords":"Medicine; Gastroenterology; Internal medicine; Multiple organ dysfunction syndrome; Systemic inflammation; Organ dysfunction; Prospective cohort study; Inflammation; Malaria; Acute kidney injury; Confidence interval; Immunology; Sepsis","score_opus":0.0026978906635530945,"score_gpt":0.2039160295526152,"score_spread":0.20121813888906212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4290759913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99942076,0.0002306831,0.000017414759,0.000050845723,0.0000051092766,0.000012273326,0.00011556502,0.000001982381,0.00014533693],"genre_scores_gemma":[0.99951494,0.00020687885,0.000059125276,0.000045225355,0.000006176832,0.000015437508,0.000112445035,8.049169e-7,0.000038961753],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995553,0.00010589088,0.000048371843,0.000070869064,0.000060112536,0.00015949616],"domain_scores_gemma":[0.99915206,0.000088116496,0.0005036695,0.000026936417,0.00006987002,0.00015927134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032793864,0.00052271737,0.00046689727,0.0007273028,0.0012225605,0.0006884949,0.00035833294,0.00044329555,0.0012016543],"category_scores_gemma":[0.001992141,0.0005259507,0.00030162546,0.0011288143,0.0005901097,0.00043598303,0.001029592,0.0008809734,0.00014906815],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040194598,0.000019587247,0.99831885,0.000019888246,0.000009397751,0.00052207685,0.00028438665,0.000014127741,0.000056848476,0.000010716162,0.00010580287,0.00059808244],"study_design_scores_gemma":[0.000009788951,0.00016905593,0.99605185,0.000039773404,0.000015732045,0.0021171276,0.001248302,0.00007297667,0.00004455256,0.00002544117,0.00019978425,0.000005619874],"about_ca_topic_score_codex":0.011852612,"about_ca_topic_score_gemma":0.014113599,"teacher_disagreement_score":0.011852612,"about_ca_system_score_codex":0.0008752521,"about_ca_system_score_gemma":0.00082847493,"threshold_uncertainty_score":0.02356726},"labels":[],"label_agreement":null},{"id":"W4290768749","doi":"10.1016/j.celrep.2022.111167","title":"Klebsiella pneumoniae hijacks the Toll-IL-1R protein SARM1 in a type I IFN-dependent manner to antagonize host immunity","year":2022,"lang":"en","type":"article","venue":"Cell Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Science Foundation Ireland; Queen's University Belfast; Queen's University; Wellcome Trust","keywords":"TRIF; Innate immune system; Biology; Klebsiella pneumoniae; Microbiology; Cell biology; Immunity; Inflammation; Inflammasome; Effector; Immune system; Toll-like receptor; Immunology; Escherichia coli; Gene; Genetics","score_opus":0.008659972316524076,"score_gpt":0.22105263662543534,"score_spread":0.21239266430891127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4290768749","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882317,0.0051853606,0.00391803,0.00038245902,0.00008391764,0.000021595637,0.0002388399,0.00011629131,0.0018217817],"genre_scores_gemma":[0.9944555,0.0012660305,0.002004983,0.00012154495,0.000012613369,0.000014336054,0.00021671428,0.000008954306,0.0018993673],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998369,0.000027970802,0.00001641727,0.000026292932,0.000043961547,0.0000484056],"domain_scores_gemma":[0.9999143,0.0000087800845,0.00003148128,0.000013508795,0.000009392459,0.000022527469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001542464,0.00041757865,0.00027281916,0.00011354935,0.000134601,0.0002515139,0.00013799,0.0003886874,0.0011680139],"category_scores_gemma":[0.000088011635,0.00010975122,0.0002699317,0.00006573087,0.00023473844,0.00025399626,0.0002808711,0.0006006371,0.00041891247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011176855,0.000017103328,0.00022694268,0.00004579009,0.0000042212355,0.00005068187,0.0000066624025,0.00002611373,0.998558,0.00006676889,0.00003345624,0.00085250614],"study_design_scores_gemma":[0.000020726457,0.00047841872,0.007821539,0.000011815889,0.000015512314,0.0006432363,0.00004917712,0.0005872583,0.98702544,0.00008442595,0.0032562332,0.000006126753],"about_ca_topic_score_codex":0.00022567678,"about_ca_topic_score_gemma":0.00045525038,"teacher_disagreement_score":0.0011680139,"about_ca_system_score_codex":0.00019429688,"about_ca_system_score_gemma":0.00022168319,"threshold_uncertainty_score":0.0039073825},"labels":[],"label_agreement":null},{"id":"W4290785918","doi":"10.21203/rs.3.rs-1796185/v1","title":"Pulmonary Neutrophil Recruitment in Response to Inhaled LPS is Impaired in CD4 Deficient Mice","year":2022,"lang":"en","type":"preprint","venue":"Research Square","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Bronchoalveolar lavage; Inflammation; Tumor necrosis factor alpha; Chemotaxis; Ex vivo; In vivo; Infiltration (HVAC); Lung; Phagocytosis; Chemistry; Immunology; Motility; Secretion; Biology; Endocrinology; Internal medicine; Medicine; Cell biology; Receptor","score_opus":0.09504536038327169,"score_gpt":0.39015476956080547,"score_spread":0.2951094091775338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4290785918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99223775,0.0012873957,0.0034370436,0.00031067082,0.000049704482,0.000057019417,0.0011676545,0.00025684922,0.0011959765],"genre_scores_gemma":[0.9859233,0.001097636,0.005436488,0.00022657974,0.000038977858,0.00017881863,0.0009532179,0.00012129536,0.006023693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99952495,0.00007627036,0.00006204782,0.00012597229,0.00010616228,0.000104598854],"domain_scores_gemma":[0.9994747,0.00004761131,0.00023956399,0.000043727854,0.00003819661,0.00015614288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031092513,0.001104373,0.0005659455,0.0011222562,0.00028654494,0.0007257492,0.0005237627,0.0009344901,0.0031421266],"category_scores_gemma":[0.00025907945,0.0005696065,0.00045823926,0.0002342459,0.0009524208,0.00038180623,0.00047809712,0.0013760424,0.0007811386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048970873,0.00006860143,0.00060924527,0.00006168182,0.000009228298,0.00019987844,0.000018275414,0.000078424455,0.9974619,0.00008196137,0.000055198234,0.00086579693],"study_design_scores_gemma":[0.00028570773,0.0016138586,0.027985286,0.00007666375,0.00012971176,0.0026223795,0.00026587752,0.0027261775,0.959994,0.00039232662,0.0038801765,0.000027820986],"about_ca_topic_score_codex":0.0006946166,"about_ca_topic_score_gemma":0.00076200266,"teacher_disagreement_score":0.0031421266,"about_ca_system_score_codex":0.00049242005,"about_ca_system_score_gemma":0.00038806,"threshold_uncertainty_score":0.010511458},"labels":[],"label_agreement":null},{"id":"W4291960433","doi":"","title":"Mechanism of action of tumor necrosis factor antagonists. Proceedings of the Canadian expert roundtable meeting, Banff, Canada, November 28-30, 2003.","year":2005,"lang":"en","type":"other","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Action (physics); Tumor necrosis factor alpha; Tumor necrosis factor α; Internal medicine","score_opus":0.01394443802033527,"score_gpt":0.20476219183388558,"score_spread":0.19081775381355032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4291960433","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017101474,0.8548675,0.0014543685,0.0057223546,0.004960427,0.000267386,0.0062263664,0.00035273202,0.12443869],"genre_scores_gemma":[0.00956432,0.57948583,0.0017477405,0.0012024579,0.00088786584,0.00019934958,0.004070171,0.000049300055,0.40279293],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998198,0.000010922294,0.000008952223,0.00001655072,0.00009267133,0.00005111344],"domain_scores_gemma":[0.9998684,0.0000148558465,0.000015782734,0.0000044659396,0.00005858877,0.000037900805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003280825,0.0015168078,0.0011806806,0.0015701738,0.0007732438,0.0013918775,0.0014383333,0.0011284895,0.07864212],"category_scores_gemma":[0.00026190325,0.00052257313,0.0005643269,0.0011152299,0.00044690372,0.0005792817,0.0004244545,0.0012774628,0.026438624],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009440316,0.00012820608,0.00019423803,0.001826935,0.00005532986,0.0005111335,0.000032859105,0.00038036308,0.01175101,0.0022734439,0.6624721,0.31943032],"study_design_scores_gemma":[0.00016051701,0.00014169738,0.0020360707,0.00029240563,0.000052462852,0.0006903264,0.000034826753,0.0001304291,0.0039083613,0.0006638472,0.9918704,0.000018496048],"about_ca_topic_score_codex":0.08949624,"about_ca_topic_score_gemma":0.27509627,"teacher_disagreement_score":0.91050375,"about_ca_system_score_codex":0.00341725,"about_ca_system_score_gemma":0.0036578907,"threshold_uncertainty_score":0.2630841},"labels":[],"label_agreement":null},{"id":"W4293780405","doi":"10.1371/journal.pbio.3001554","title":"The antimicrobial peptide cathelicidin drives development of experimental autoimmune encephalomyelitis in mice by affecting Th17 differentiation","year":2022,"lang":"en","type":"article","venue":"PLoS Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Medical Research Council; University of Edinburgh; Royal Society; Action Medical Research","keywords":"Cathelicidin; Experimental autoimmune encephalomyelitis; Biology; Immunology; Autoimmunity; Multiple sclerosis; Microglia; Interleukin 17; Inflammation; Cytokine; Interleukin 23; Immune system; Innate immune system","score_opus":0.009422098532022036,"score_gpt":0.22889881715363636,"score_spread":0.21947671862161433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293780405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99323153,0.0014072675,0.0016050647,0.00026921846,0.00007350778,0.000044566445,0.00071430596,0.00023446878,0.0024200024],"genre_scores_gemma":[0.99102247,0.0009884342,0.0033381756,0.00021261345,0.00003487635,0.00009574971,0.00055924535,0.00006423527,0.0036841212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994711,0.00011318513,0.00005837985,0.00011434123,0.00009815097,0.00014477648],"domain_scores_gemma":[0.99945897,0.000056653844,0.00018073816,0.000054587388,0.000031786232,0.00021727086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030484627,0.00058956555,0.00037501668,0.0007666076,0.00029717432,0.0005630836,0.00029553502,0.00077571877,0.001361715],"category_scores_gemma":[0.00021303903,0.00039851936,0.0003325621,0.00026783985,0.00046010345,0.00033938978,0.000418162,0.0016998928,0.00046681578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037723745,0.00012637842,0.0004131698,0.000043709504,0.000009067895,0.00009532105,0.000042833766,0.000078113175,0.9972894,0.00020839041,0.00008137999,0.0012350827],"study_design_scores_gemma":[0.00017114481,0.0017468279,0.012696589,0.00006361909,0.000053276737,0.0005584765,0.00011984866,0.001988353,0.97708,0.00045451953,0.005046474,0.000020902144],"about_ca_topic_score_codex":0.0004596986,"about_ca_topic_score_gemma":0.0010124688,"teacher_disagreement_score":0.001361715,"about_ca_system_score_codex":0.000441193,"about_ca_system_score_gemma":0.0003291169,"threshold_uncertainty_score":0.004555404},"labels":[],"label_agreement":null},{"id":"W4294232767","doi":"10.1615/critrevimmunol.v22.i4.50","title":"Role of IFN-g in Allograft Rejection","year":2002,"lang":"en","type":"article","venue":"Critical Reviews in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":82,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immunology; CTL*; Interferon; Immune system; Cytokine; Major histocompatibility complex; Transplant rejection; Transplantation; Inflammation; Organ transplantation; Medicine; Biology; CD8; Internal medicine","score_opus":0.021058021391438832,"score_gpt":0.282765060680639,"score_spread":0.2617070392892002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294232767","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31588107,0.6560053,0.0065519745,0.0033913082,0.0013771043,0.000063228705,0.00010283684,0.00019092596,0.016436191],"genre_scores_gemma":[0.89110464,0.0990344,0.0020482477,0.00079005666,0.0009489462,0.00003748648,0.000069116984,0.000022378137,0.005944769],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997404,0.0001062721,0.000021975415,0.000026631164,0.00005091022,0.000053810487],"domain_scores_gemma":[0.99973875,0.00008408805,0.000060064885,0.00001596453,0.000032599764,0.00006845861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006400174,0.000567779,0.00054062856,0.00044207624,0.00022522364,0.0006042767,0.000263007,0.0010126738,0.0009245723],"category_scores_gemma":[0.0004230338,0.00009017603,0.00019455531,0.00015180661,0.00043157517,0.00038674712,0.000360512,0.00070011406,0.00037359612],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038443229,0.00028334625,0.006104502,0.0016216097,0.00007426065,0.004786939,0.00025491058,0.0010288447,0.6853777,0.011821462,0.002899301,0.28190285],"study_design_scores_gemma":[0.00057133165,0.0049556782,0.06584221,0.0017183986,0.00045971887,0.021131717,0.00081831135,0.004592513,0.5935913,0.041750975,0.26447332,0.00009458046],"about_ca_topic_score_codex":0.00011726682,"about_ca_topic_score_gemma":0.00010087287,"teacher_disagreement_score":0.0010126738,"about_ca_system_score_codex":0.0004992354,"about_ca_system_score_gemma":0.00022580202,"threshold_uncertainty_score":0.0036222339},"labels":[],"label_agreement":null},{"id":"W4294349425","doi":"10.1523/jneurosci.20-09-03456.2000","title":"Role of Microglial-Derived Tumor Necrosis Factor in Mediating CD14 Transcription and Nuclear Factor κ B Activity in the Brain during Endotoxemia","year":2000,"lang":"en","type":"article","venue":"Journal of Neuroscience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":176,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"Medical Research Council; Medical Research Council Canada","keywords":"Tumor necrosis factor alpha; Cytokine; Circumventricular organs; Autocrine signalling; Microglia; Biology; Lipopolysaccharide; Paracrine signalling; Proinflammatory cytokine; Endocrinology; Parenchyma; Internal medicine; Medicine; Immunology; Receptor; Pathology; Inflammation; Central nervous system","score_opus":0.010932116410054229,"score_gpt":0.22503485424501377,"score_spread":0.21410273783495953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294349425","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9954294,0.0022208,0.0014866187,0.00006507211,0.000022619917,0.000024003322,0.00007441206,0.000031895175,0.000645135],"genre_scores_gemma":[0.99408084,0.0018871353,0.002209308,0.00004447682,0.000030148154,0.000077979865,0.00014594116,0.0000106662455,0.0015135234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998617,0.000023255116,0.000010795332,0.000026567877,0.000028212935,0.000049400107],"domain_scores_gemma":[0.99985015,0.0000121583935,0.000054061973,0.000013998069,0.000028832663,0.0000407356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018851145,0.00043171959,0.00030407417,0.0003687441,0.00023634935,0.00025507426,0.00016521425,0.0003433846,0.00069531595],"category_scores_gemma":[0.00022304709,0.00017592462,0.0002940485,0.00010544897,0.00042773972,0.0003068305,0.0002628085,0.0004703644,0.00026774232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006443845,0.000034649616,0.00058311084,0.00005001283,0.0000055135733,0.0002876163,0.00007942231,0.000021324873,0.9970573,0.000063226,0.000012981344,0.0011605942],"study_design_scores_gemma":[0.00010477136,0.0014521267,0.051764436,0.000069804744,0.000066923145,0.0012467835,0.00047155743,0.0009866464,0.94176376,0.0005158923,0.0015341896,0.00002317821],"about_ca_topic_score_codex":0.00048736934,"about_ca_topic_score_gemma":0.00058625365,"teacher_disagreement_score":0.00069531595,"about_ca_system_score_codex":0.00026119009,"about_ca_system_score_gemma":0.00028934592,"threshold_uncertainty_score":0.0023260713},"labels":[],"label_agreement":null},{"id":"W4294958676","doi":"10.1038/s41467-022-32587-4","title":"IFITM3 restricts virus-induced inflammatory cytokine production by limiting Nogo-B mediated TLR responses","year":2022,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":42,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Center for Advancing Translational Sciences; Cardiff University; University of Oxford; Chinese Academy of Medical Sciences; National Institute for Health and Care Research; Health and Care Research Wales; Wellcome Trust; National Institute of Neurological Disorders and Stroke; Medical Research Council; Wellcome","keywords":"Pathogenesis; TLR2; Cytokine; Cell biology; Viral pathogenesis; Transmembrane protein; Biology; Inflammation; Virus; Immunology; Signal transduction; TLR4; Viral replication; Receptor","score_opus":0.020627229628498108,"score_gpt":0.2708076714962676,"score_spread":0.2501804418677695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294958676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898337,0.002314685,0.004652739,0.00023636964,0.00005126019,0.000044976703,0.00040197346,0.00013069592,0.0023335991],"genre_scores_gemma":[0.9930472,0.00091824797,0.0042675957,0.00009663183,0.000016065529,0.000045628152,0.00034037317,0.000022730388,0.0012455648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989176,0.00001787476,0.0000088837305,0.000017096098,0.000028323746,0.000035899182],"domain_scores_gemma":[0.9999441,0.0000069078424,0.000019404031,0.000006104352,0.000005225922,0.000018160626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013581004,0.00028116742,0.0001821077,0.00016218679,0.00017054756,0.00027176904,0.00016859728,0.00028005714,0.0008640054],"category_scores_gemma":[0.000082119084,0.00008382536,0.0002296709,0.00007871521,0.00022013338,0.00016147757,0.0002030129,0.00054366316,0.00027818873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059551086,0.000009906995,0.000070927774,0.000019251955,0.0000014521463,0.000022075317,0.0000052991522,0.000028501456,0.9990609,0.0000761792,0.0000305437,0.00061548146],"study_design_scores_gemma":[0.00002178667,0.00030337714,0.0021646812,0.000009891738,0.000009349478,0.0004178627,0.000026778596,0.00061574613,0.99210703,0.000085281434,0.004234679,0.0000036242823],"about_ca_topic_score_codex":0.00045480512,"about_ca_topic_score_gemma":0.00077509735,"teacher_disagreement_score":0.0008640054,"about_ca_system_score_codex":0.00023263514,"about_ca_system_score_gemma":0.0002500072,"threshold_uncertainty_score":0.0028903484},"labels":[],"label_agreement":null},{"id":"W4295445025","doi":"10.1111/cts.13387","title":"Manufacturing‐dependent change in biological activity of the <scp>TLR4</scp> agonist <scp>GSK1795091</scp> and implications for lipid A analog development","year":2022,"lang":"en","type":"article","venue":"Clinical and Translational Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Chugai Pharmaceutical; Sanofi Genzyme; Merck Sharp and Dohme; EMD Serono; Genentech; MacroGenics; Silverback Therapeutics; Principia Biopharma; Puma Biotechnology; F-star Therapeutics; Aminex Therapeutics; BeiGene; Mirati Therapeutics; Jounce Therapeutics; Wellcome Trust; Array BioPharma; Five Prime Therapeutics; Conquer Cancer Foundation; Taiho Pharmaceutical; National Institutes of Health; Regeneron Pharmaceuticals; BioMarin Pharmaceutical; Daiichi Sankyo Europe; National Cancer Institute; Intuitive Surgical; Gilead Sciences; Bristol-Myers Squibb; ImmunoMedics; Adenoid Cystic Carcinoma Research Foundation; Eli Lilly and Company; American Society of Clinical Oncology; GlaxoSmithKline; Gateway for Cancer Research; Exelixis; Sanofi; Abbott Laboratories; Incyte; Pfizer; Amgen","keywords":"Medicine; Pharmacodynamics; Agonist; Chills; Adverse effect; Cytokine; Pharmacology; Pharmacokinetics; Nausea; TLR4; Clinical endpoint; Immunotherapy; Clinical trial; Immune system; Internal medicine; Immunology; Receptor","score_opus":0.07507872474596153,"score_gpt":0.3287074352560683,"score_spread":0.2536287105101068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295445025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99126726,0.0025990105,0.001799016,0.00032747633,0.00009090602,0.00068489753,0.0004294002,0.000057578585,0.0027444018],"genre_scores_gemma":[0.994849,0.0007878316,0.0025319387,0.00031310561,0.00003925713,0.00024522867,0.00046683356,0.000021142603,0.0007455925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989428,0.00043821824,0.00011447604,0.00012540091,0.00028844725,0.000090802045],"domain_scores_gemma":[0.99914217,0.00023688414,0.0004103954,0.00010408652,0.000058164496,0.000048273803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025386408,0.00038926007,0.00032412176,0.00020960851,0.00016187238,0.000705213,0.00036336176,0.0005215582,0.0020351366],"category_scores_gemma":[0.0016339382,0.00023730425,0.00056286604,0.0002373011,0.00042317275,0.00041724934,0.00023098478,0.0007323976,0.0004752813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.03489511,0.0040686927,0.0159706,0.00071446237,0.0004240439,0.00055352267,0.00014149828,0.004006408,0.7751058,0.00070095377,0.002035497,0.1613834],"study_design_scores_gemma":[0.027004806,0.35188526,0.10351666,0.00015482132,0.0010430699,0.0033814292,0.00021705666,0.0069992314,0.46852356,0.0010506244,0.036096264,0.0001272968],"about_ca_topic_score_codex":0.00040844007,"about_ca_topic_score_gemma":0.000839756,"teacher_disagreement_score":0.0025386408,"about_ca_system_score_codex":0.0005643271,"about_ca_system_score_gemma":0.00055791036,"threshold_uncertainty_score":0.013425767},"labels":[],"label_agreement":null},{"id":"W4295895361","doi":"10.1016/j.intimp.2022.109218","title":"Inhibition of MyD88 attenuates angiotensin II-induced hypertensive kidney disease via regulating renal inflammation","year":2022,"lang":"en","type":"article","venue":"International Immunopharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Science and Technology Plan Project of Wenzhou, China; National Natural Science Foundation of China","keywords":"Inflammation; TLR4; Fibrosis; Kidney; Angiotensin II; Receptor; Chemistry; Endocrinology; Internal medicine; Medicine; Pharmacology; Cancer research; Immunology","score_opus":0.011906019465834009,"score_gpt":0.25410954024034765,"score_spread":0.24220352077451365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295895361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911255,0.0027430218,0.0032654668,0.0004939946,0.00029218546,0.00007844051,0.00017465187,0.00019976919,0.0016269009],"genre_scores_gemma":[0.9934282,0.0015753288,0.0019669933,0.00020017488,0.000058709313,0.000092900176,0.00023244489,0.000017374809,0.0024278099],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981755,0.0000355232,0.00001714173,0.00002308448,0.000024203751,0.000082531165],"domain_scores_gemma":[0.9999105,0.000005132624,0.00002047604,0.000008760931,0.000009719318,0.000045355097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027724667,0.0005984568,0.0008254857,0.00020415544,0.00022606204,0.00033798924,0.00039753184,0.00040482113,0.0019469934],"category_scores_gemma":[0.00019962365,0.00023592763,0.00043830814,0.0001159419,0.00046826937,0.00044226044,0.0003286795,0.0017124825,0.0003791145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02039686,0.002731456,0.0012087026,0.00052095286,0.00015479776,0.00019342874,0.00008405059,0.0005372058,0.94508207,0.0006259061,0.0008219216,0.02764261],"study_design_scores_gemma":[0.0046019526,0.018069081,0.030125491,0.000100827136,0.00050300854,0.0006115379,0.00036333405,0.007926177,0.9271968,0.00064987957,0.009795283,0.000056632794],"about_ca_topic_score_codex":0.00034996483,"about_ca_topic_score_gemma":0.0005670659,"teacher_disagreement_score":0.0019469934,"about_ca_system_score_codex":0.00018548926,"about_ca_system_score_gemma":0.00053527596,"threshold_uncertainty_score":0.0065132976},"labels":[],"label_agreement":null},{"id":"W4298141614","doi":"10.3389/fimmu.2022.994480","title":"Distinct spatial distribution and roles of Kupffer cells and monocyte-derived macrophages in mouse acute liver injury","year":2022,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation; Public Health Agency; Public Health Agency of Canada","keywords":"Monocyte; Kupffer cell; Liver injury; Macrophage; Cell biology; Distribution (mathematics); Immunology; Biology; Pathology; Medicine; In vitro; Endocrinology; Biochemistry; Mathematics","score_opus":0.003862543103037613,"score_gpt":0.1966789754255267,"score_spread":0.1928164323224891,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298141614","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9914317,0.001987838,0.005336048,0.000058322843,0.000011289116,0.00003784218,0.00033652462,0.000099988894,0.0007003268],"genre_scores_gemma":[0.98568326,0.0014806949,0.009656047,0.000070856346,0.00001289878,0.0001749028,0.00039189894,0.000043696895,0.0024856057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999703,0.000044472905,0.000035009365,0.00006355358,0.00005741237,0.000096432115],"domain_scores_gemma":[0.99983215,0.000018820267,0.00005215661,0.00001910201,0.000023080613,0.000054557117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032819825,0.00041959848,0.0003202204,0.0014335505,0.00020828644,0.00040775267,0.00015777319,0.0003902038,0.000871132],"category_scores_gemma":[0.00013000505,0.00030840008,0.00025235678,0.0002844203,0.00036421124,0.0003490331,0.00032532416,0.0006122178,0.0003302733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028293967,0.000028530823,0.0013267016,0.00005374366,0.0000034853285,0.000074261945,0.0000818494,0.000051265102,0.9963444,0.00008874151,0.000012175065,0.0016519132],"study_design_scores_gemma":[0.000034595752,0.0005507839,0.042288087,0.000032103613,0.00004505829,0.00074444263,0.0002547587,0.0016179271,0.95263594,0.0002574541,0.0015205577,0.00001830385],"about_ca_topic_score_codex":0.00044919786,"about_ca_topic_score_gemma":0.0005364678,"teacher_disagreement_score":0.0014335505,"about_ca_system_score_codex":0.0002191303,"about_ca_system_score_gemma":0.00017868468,"threshold_uncertainty_score":0.0029141903},"labels":[],"label_agreement":null},{"id":"W4298406980","doi":"","title":"Abstracts of the 37th Annual Meeting of the Society for Leukocyte Biology. October 21-23, 2004, Toronto, Canada.","year":2004,"lang":"en","type":"other","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Library science; Biology; Computer science","score_opus":0.007285984799078221,"score_gpt":0.19793165300904433,"score_spread":0.19064566820996612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298406980","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036040687,0.19331197,0.0031579132,0.016326452,0.05106811,0.00079790654,0.047423907,0.0015222729,0.6827875],"genre_scores_gemma":[0.0017366861,0.03457007,0.000428459,0.00049866934,0.0017783385,0.000072708586,0.0062436685,0.00014644627,0.9545251],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994679,0.00003765157,0.000027307984,0.00007754707,0.00024217991,0.00014735985],"domain_scores_gemma":[0.9981989,0.00010873998,0.00007569291,0.00005155358,0.001029582,0.00053557137],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00090693677,0.002531263,0.002740144,0.00277568,0.002760463,0.003361479,0.0019467914,0.0017665875,0.556235],"category_scores_gemma":[0.0010939081,0.0008327513,0.0009315401,0.002972892,0.0008301178,0.0012865866,0.001394745,0.0020239681,0.32389882],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001820186,0.000034142176,0.00016948243,0.0002974302,0.000019147095,0.000060475097,0.00003095947,0.000071297996,0.0006317445,0.00031580916,0.9659159,0.032271493],"study_design_scores_gemma":[0.000050023544,0.000040659157,0.0028470852,0.00028906504,0.000031287935,0.00009764262,0.000084901694,0.000071821116,0.00030023634,0.00028705635,0.9958832,0.000017042586],"about_ca_topic_score_codex":0.16659088,"about_ca_topic_score_gemma":0.49235496,"teacher_disagreement_score":0.556235,"about_ca_system_score_codex":0.0064412383,"about_ca_system_score_gemma":0.0067317546,"threshold_uncertainty_score":0.6329769},"labels":[],"label_agreement":null},{"id":"W4299594890","doi":"","title":"Enhanced responses in antigen primed dogs after administration of a complex microbial immune stimulating compound","year":2017,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Immune system; Antigen; Immunology; Microbiology; Biology; Medicine","score_opus":0.18824368783758258,"score_gpt":0.5213305200565287,"score_spread":0.3330868322189461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4299594890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991227,0.00029878796,0.00013097207,0.000019954226,0.000013788264,0.000020928348,0.00007408368,0.000009341875,0.00030940172],"genre_scores_gemma":[0.9969971,0.0005012728,0.0006000173,0.000056460747,0.000027135853,0.000039703737,0.00025371055,0.000004727648,0.0015198974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998975,0.00001678224,0.0000058572396,0.000028776421,0.00001988335,0.0000312366],"domain_scores_gemma":[0.9999062,0.000016458414,0.00002595938,0.000007523105,0.000010539243,0.000033300665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017909934,0.00023973899,0.0002907945,0.00023607704,0.00009949824,0.00022584575,0.00010274027,0.00034485172,0.0011328683],"category_scores_gemma":[0.00016668075,0.00010317235,0.00013762759,0.000077889745,0.00027902093,0.00022628199,0.00010958672,0.0004571274,0.0002445926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020821874,0.00046600745,0.0014066256,0.00009822784,0.000008118045,0.00021724551,0.00007506257,0.000061822924,0.993341,0.000056156525,0.000045250978,0.0021421926],"study_design_scores_gemma":[0.00025399635,0.07310951,0.059882928,0.000029914654,0.000080825055,0.0012766746,0.00037381306,0.0006149259,0.8605261,0.00016122987,0.0036711183,0.000018864957],"about_ca_topic_score_codex":0.00013075372,"about_ca_topic_score_gemma":0.00023079767,"teacher_disagreement_score":0.0011328683,"about_ca_system_score_codex":0.00015339877,"about_ca_system_score_gemma":0.00014868869,"threshold_uncertainty_score":0.0037898421},"labels":[],"label_agreement":null},{"id":"W4300186694","doi":"10.1007/3-540-27806-0_957","title":"Maturation of the Immune Response","year":2006,"lang":"en","type":"book-chapter","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immune system; Biology; Immunology","score_opus":0.007258891489039759,"score_gpt":0.19839315160580423,"score_spread":0.19113426011676446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300186694","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0043727895,0.21557096,0.026501315,0.005606801,0.004636562,0.00010310312,0.00018631303,0.00031746275,0.74270475],"genre_scores_gemma":[0.057340045,0.17873338,0.019478098,0.0049724225,0.0024376037,0.00021520528,0.00033716124,0.00017008284,0.73631597],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9997973,0.000039128237,0.0000069961256,0.000038446116,0.000091426155,0.000026737784],"domain_scores_gemma":[0.99989486,0.00003051438,0.0000073222777,0.000013245662,0.000032119515,0.000022031692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003753368,0.0005337994,0.0005153447,0.00044795463,0.00043463093,0.0022214972,0.0007372245,0.00087108096,0.014136754],"category_scores_gemma":[0.0003667044,0.00024100704,0.00027346864,0.00034442163,0.0011556827,0.0015579737,0.0009444904,0.0031362858,0.0076677715],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010069103,0.00009227591,0.00019114526,0.00084356545,0.0000146434395,0.00039169248,0.0004365591,0.0006565548,0.0721801,0.46353167,0.09894476,0.3626162],"study_design_scores_gemma":[0.0000061449523,0.000045665343,0.0003530463,0.00021314382,0.000004228091,0.00056657946,0.000070346716,0.00018060805,0.0073341043,0.03623202,0.9549863,0.000007823617],"about_ca_topic_score_codex":0.00047925222,"about_ca_topic_score_gemma":0.0005940124,"teacher_disagreement_score":0.014136754,"about_ca_system_score_codex":0.0009391033,"about_ca_system_score_gemma":0.0008790977,"threshold_uncertainty_score":0.047292173},"labels":[],"label_agreement":null},{"id":"W4300199480","doi":"10.26443/msurj.v2i1.134","title":"Lipopolysaccharide-induced lung injury does not require production of reactive oxygen species by NAD(P)H oxidase","year":2007,"lang":"en","type":"article","venue":"McGill Science Undergraduate Research Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University","funders":"","keywords":"TLR4; Lipopolysaccharide; NAD(P)H oxidase; NAD+ kinase; Inflammation; Oxidase test; Reactive oxygen species; Chemistry; Endothelium; Signal transduction; NADPH oxidase; Nitric oxide; Immunology; Biology; Biochemistry; Enzyme; Endocrinology","score_opus":0.038056124744931676,"score_gpt":0.34634630890951246,"score_spread":0.30829018416458076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4300199480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869998,0.0022714061,0.0038574277,0.00057132443,0.0001712503,0.00006274565,0.0009881161,0.00011799732,0.004959956],"genre_scores_gemma":[0.9880833,0.0007202446,0.0027151925,0.00018504186,0.000020195539,0.0000738906,0.0012918448,0.000030403056,0.006879878],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997377,0.000036010773,0.000030819247,0.000054359967,0.00007068192,0.00007043537],"domain_scores_gemma":[0.9996113,0.000033365668,0.00012676003,0.00007352101,0.00004494665,0.000110093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002376133,0.00027793582,0.00030672198,0.00022704597,0.00014377017,0.00039279312,0.0003703534,0.00054534705,0.0029694284],"category_scores_gemma":[0.0002147079,0.00025539915,0.0003414062,0.00014368615,0.00048858265,0.00044862833,0.00030294596,0.0009865627,0.0007563445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005435692,0.00011660102,0.0004436538,0.000057853624,0.000006947624,0.000096791,0.00001309634,0.000032462754,0.99688417,0.0002951642,0.00008326466,0.0014264556],"study_design_scores_gemma":[0.00008763479,0.001147219,0.021786785,0.00003392946,0.000016547003,0.0004924145,0.00006934202,0.00083207525,0.9715797,0.00028439256,0.0036570327,0.000012990641],"about_ca_topic_score_codex":0.000677467,"about_ca_topic_score_gemma":0.0011706912,"teacher_disagreement_score":0.0029694284,"about_ca_system_score_codex":0.00035082936,"about_ca_system_score_gemma":0.000297626,"threshold_uncertainty_score":0.0099336505},"labels":[],"label_agreement":null},{"id":"W4307825673","doi":"10.1101/2022.10.27.513985","title":"A cold-blooded vertebrate shows integration of antimicrobial defenses and tissue repair through fever","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Comisión Nacional de Investigación Científica y Tecnológica; Directorate for Biological Sciences; University of Alberta","keywords":"Biology; Inflammation; Immune system; Thermoregulation; Pathogen; Immunology; Immunity; Cytokine; Downregulation and upregulation; Gene; Ecology; Genetics","score_opus":0.013764184184200117,"score_gpt":0.22686933010018118,"score_spread":0.21310514591598106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307825673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9811048,0.00091398915,0.013840352,0.00028999863,0.000081790226,0.000022027694,0.00064168655,0.00023446068,0.0028709003],"genre_scores_gemma":[0.986198,0.00027067278,0.008412686,0.0001690633,0.000018737632,0.000027040585,0.00034006973,0.00006971163,0.0044940864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989927,0.000008845997,0.0000067912383,0.000043146272,0.000017721826,0.000024181134],"domain_scores_gemma":[0.9999049,0.000008960801,0.000030787938,0.000018606277,0.000011446108,0.00002534777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000121308934,0.0001751948,0.00019469799,0.00015207042,0.00024057267,0.00033865805,0.0001295095,0.00033433756,0.0018744494],"category_scores_gemma":[0.00010618659,0.0001302993,0.00023974903,0.00006724854,0.00052002334,0.00025038052,0.0004161141,0.00057181984,0.0004286822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003354404,0.0000030781378,0.00049588643,0.000015747903,0.0000020462548,0.000026152098,0.000013844469,0.00002556883,0.99865746,0.00013202682,0.000035641413,0.0005589467],"study_design_scores_gemma":[0.000015129651,0.00048488702,0.07955695,0.000027669174,0.000022176859,0.0007793174,0.00011293119,0.0013858787,0.9122366,0.0005143569,0.004843285,0.000020899297],"about_ca_topic_score_codex":0.00038599697,"about_ca_topic_score_gemma":0.00053714885,"teacher_disagreement_score":0.0018744494,"about_ca_system_score_codex":0.00022797873,"about_ca_system_score_gemma":0.00012430985,"threshold_uncertainty_score":0.006270647},"labels":[],"label_agreement":null},{"id":"W4308024461","doi":"","title":"Two SNPs in the promoter region of Toll-like receptor 4 gene are not associated with smoking in Saudi Arabia","year":2017,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Single-nucleotide polymorphism; Toll-like receptor; Gene; Genetics; Toll; Promoter; Biology; Receptor; Genotype; Gene expression; Innate immune system","score_opus":0.1717299437566702,"score_gpt":0.4667477889323015,"score_spread":0.29501784517563134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308024461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9996668,0.00011206268,0.000046635396,0.000024032783,0.0000027700432,0.000001927266,0.000038375758,9.058173e-7,0.000106484615],"genre_scores_gemma":[0.9995937,0.00009459106,0.000077594035,0.000025438136,0.0000046505966,0.0000018330572,0.00008754436,0.000001217044,0.000113490874],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997589,0.000053127984,0.000046742636,0.000055103083,0.00005047885,0.0000355683],"domain_scores_gemma":[0.9994578,0.00015275586,0.00019023471,0.000046303892,0.00009591489,0.000056990186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003647352,0.00029677877,0.0002373536,0.0003766526,0.0003614925,0.0003888035,0.0003370961,0.0003692811,0.001707166],"category_scores_gemma":[0.0008096019,0.00018978001,0.00036531966,0.00045976366,0.00023382326,0.00017104475,0.00024982446,0.00026431947,0.00019852575],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005257069,0.000074895484,0.9855555,0.000036190915,0.00012381314,0.0004736792,0.00043770764,0.0000659316,0.007457678,0.000056057437,0.00009626442,0.0050964933],"study_design_scores_gemma":[0.000036659338,0.0002407497,0.99432665,0.000028297953,0.00015810961,0.0020145504,0.00070834137,0.0007099895,0.0011486703,0.000054244956,0.0005631841,0.000010570866],"about_ca_topic_score_codex":0.008165087,"about_ca_topic_score_gemma":0.0063154446,"teacher_disagreement_score":0.008165087,"about_ca_system_score_codex":0.00017508656,"about_ca_system_score_gemma":0.00031568087,"threshold_uncertainty_score":0.016235113},"labels":[],"label_agreement":null},{"id":"W4310046493","doi":"10.1111/imr.13174","title":"Understanding inhibitory receptor function in neutrophils through the lens of <scp>CLEC12A</scp>","year":2022,"lang":"en","type":"review","venue":"Immunological Reviews","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research; Arthritis Society","keywords":"Receptor; Biology; Inhibitory postsynaptic potential; Collateral damage; Cell biology; Function (biology); Immunology; Inflammation; Signal transduction; Immune system; Neuroscience; Genetics","score_opus":0.24581391853588316,"score_gpt":0.32646717732823904,"score_spread":0.08065325879235588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310046493","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020647982,0.9969081,0.00027104685,0.0004544246,0.00050523586,0.000004113914,0.000015120892,0.000007337084,0.0016279811],"genre_scores_gemma":[0.0012155495,0.9954587,0.00041973803,0.0004900468,0.0003811258,0.000007969126,0.000036358346,0.0000026002695,0.0019880226],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999021,0.00001795617,0.000011022689,0.000016501284,0.00004084567,0.00001151334],"domain_scores_gemma":[0.99988174,0.000039767154,0.000014501585,0.000005590923,0.000042226155,0.000016091459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040826979,0.00070753146,0.00072865875,0.0009952708,0.000187336,0.0007443236,0.0005803666,0.00082985923,0.0014969384],"category_scores_gemma":[0.00033821407,0.00018292181,0.0002844027,0.001031478,0.00046702812,0.0012468345,0.00042885978,0.001893708,0.0017189074],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013744598,0.00007900728,0.00019796449,0.01379413,0.00007301441,0.0003318851,0.000105408006,0.0007617017,0.017507998,0.018547375,0.056406368,0.8920578],"study_design_scores_gemma":[0.000011568674,0.0000802813,0.00051125133,0.0011402556,0.000028268762,0.0006523473,0.000025841293,0.00012778511,0.0012675175,0.0022112075,0.993932,0.0000116546835],"about_ca_topic_score_codex":0.0011079342,"about_ca_topic_score_gemma":0.0015459064,"teacher_disagreement_score":0.0014969384,"about_ca_system_score_codex":0.00056741707,"about_ca_system_score_gemma":0.00061142305,"threshold_uncertainty_score":0.005007744},"labels":[],"label_agreement":null},{"id":"W4310553596","doi":"10.1016/j.jaci.2022.09.033","title":"Human MD2 deficiency—an inborn error of immunity with pleiotropic features","year":2022,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Biology; Induced pluripotent stem cell; Exome sequencing; TLR4; Cytokine; Immunology; Signal transduction; Mutation; Cell biology; Cancer research; Genetics; Gene","score_opus":0.022137073876065602,"score_gpt":0.3085080115739339,"score_spread":0.2863709376978683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310553596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98635256,0.0032300253,0.0036178795,0.0011256578,0.00035131632,0.000037497743,0.0009585192,0.00015015356,0.0041763172],"genre_scores_gemma":[0.99643743,0.00069138024,0.0008103987,0.00013502831,0.00010697676,0.000009454898,0.00030507965,0.000023666782,0.0014805344],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.99984026,0.000034787445,0.000026881806,0.000043229564,0.000027864799,0.000026908661],"domain_scores_gemma":[0.99976283,0.0000785043,0.00005755083,0.000022563616,0.000018852068,0.000059754035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016318205,0.0013642131,0.00056362455,0.00062683964,0.0004887296,0.00033598984,0.00034798484,0.00095100945,0.0027008795],"category_scores_gemma":[0.0005145168,0.00020482714,0.00022328476,0.00045800037,0.0010569219,0.0002523481,0.0005589667,0.0005655888,0.000568283],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0071747433,0.00028772073,0.022476347,0.00048694396,0.00021696987,0.41057244,0.00048000124,0.0010861072,0.5175059,0.0051678875,0.0049145003,0.029630486],"study_design_scores_gemma":[0.000611011,0.0020009459,0.07560779,0.0001721761,0.0006971084,0.67505306,0.00071246474,0.0033560623,0.20364802,0.0044603148,0.033565696,0.00011542776],"about_ca_topic_score_codex":0.0008775126,"about_ca_topic_score_gemma":0.0004447461,"teacher_disagreement_score":0.0027008795,"about_ca_system_score_codex":0.00020692025,"about_ca_system_score_gemma":0.00029128088,"threshold_uncertainty_score":0.009035289},"labels":[],"label_agreement":null},{"id":"W4312070732","doi":"10.3389/fphys.2022.1059686","title":"Early mechanisms of neutrophil activation and transmigration in acute lung injury","year":2022,"lang":"en","type":"article","venue":"Frontiers in Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Medicine; Lung; Neutrophil extracellular traps; Inflammation; Immunology; Intensive care medicine; Internal medicine","score_opus":0.003519391954806878,"score_gpt":0.2016849236412536,"score_spread":0.1981655316864467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312070732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.916848,0.05243094,0.023878116,0.0005074822,0.00015234851,0.0004271954,0.0006212613,0.00034335803,0.0047912817],"genre_scores_gemma":[0.97677046,0.011069446,0.0067307544,0.00018710409,0.000096760814,0.00023930769,0.00047020154,0.000011832482,0.004424152],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964213,0.00008347463,0.00003352682,0.00006333251,0.00010261888,0.00007500658],"domain_scores_gemma":[0.9998016,0.000017153738,0.00008284069,0.000014359698,0.000031326646,0.00005274093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038946312,0.000716428,0.00048177852,0.0005782584,0.00017258653,0.0005279691,0.0003681361,0.00066334795,0.0018717465],"category_scores_gemma":[0.00019449464,0.00024388144,0.00031743554,0.00015089625,0.00026935688,0.00052841293,0.00053243584,0.0009036182,0.00047582935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010346471,0.00017598958,0.0033849876,0.000606493,0.000024358871,0.00049922714,0.00011804782,0.00016683456,0.97718495,0.00095872174,0.00028520386,0.015560528],"study_design_scores_gemma":[0.00017318943,0.0058485814,0.19207244,0.0004908403,0.0001627487,0.0062024416,0.00041370752,0.0025038356,0.7708924,0.0024446498,0.018737815,0.000057365858],"about_ca_topic_score_codex":0.00021901584,"about_ca_topic_score_gemma":0.00030410115,"teacher_disagreement_score":0.0018717465,"about_ca_system_score_codex":0.00035019446,"about_ca_system_score_gemma":0.00022369559,"threshold_uncertainty_score":0.006261587},"labels":[],"label_agreement":null},{"id":"W4312083714","doi":"10.1016/j.jve.2022.100203","title":"OP 4.3 – 00112 Leaky reservoirs are associated with HIV-specific cd4 and CD8 T-cell responses","year":2022,"lang":"en","type":"article","venue":"Journal of Virus Eradication","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal","funders":"","keywords":"Human immunodeficiency virus (HIV); CD8; Biology; Virology; Immunology; Immune system","score_opus":0.016191298519321436,"score_gpt":0.2261124570120473,"score_spread":0.20992115849272586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312083714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97944564,0.0041836365,0.00197194,0.0007669773,0.00020908729,0.000101364625,0.00093050546,0.00032716812,0.012063665],"genre_scores_gemma":[0.98349667,0.00050198875,0.00102406,0.00030341037,0.00013899514,0.00008224492,0.001043302,0.00009742509,0.01331188],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995004,0.000082628205,0.000026038831,0.000071088405,0.00009700995,0.00022279278],"domain_scores_gemma":[0.999542,0.00010412023,0.00009374382,0.00007628853,0.000030495294,0.00015339797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029455865,0.00039289743,0.0004629629,0.00053102226,0.00037862273,0.0011432208,0.00028017277,0.0009897235,0.033046294],"category_scores_gemma":[0.00044115304,0.00035711224,0.00030141877,0.00018041756,0.0005419207,0.00051268144,0.00080454926,0.002652145,0.006678395],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030359828,0.0006165344,0.0044526365,0.0002809913,0.00004585045,0.0016200828,0.00009137707,0.00013427525,0.96542346,0.0011970374,0.0024208233,0.020680886],"study_design_scores_gemma":[0.0010824703,0.0062350314,0.27604178,0.00038379116,0.0001892266,0.03102029,0.001395885,0.0045005674,0.6099105,0.005226122,0.06393318,0.000081116],"about_ca_topic_score_codex":0.00019636903,"about_ca_topic_score_gemma":0.00022436868,"teacher_disagreement_score":0.033046294,"about_ca_system_score_codex":0.0002670397,"about_ca_system_score_gemma":0.00018195374,"threshold_uncertainty_score":0.11055088},"labels":[],"label_agreement":null},{"id":"W4313030987","doi":"10.1189/jlb.68.6.897","title":"Role of IL-12 in macrophage activation during intracellular infection: IL-12 and mycobacteria synergistically release TNF-α and nitric oxide from macrophages via IFN-γ induction","year":2000,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"","keywords":"Macrophage; Intracellular; Biology; Macrophage-activating factor; Nitric oxide; Cytokine; Tumor necrosis factor alpha; Microbiology; Interferon gamma; In vitro; Immunology; Macrophage inflammatory protein; Alveolar macrophage; Interleukin; Cell biology; Biochemistry","score_opus":0.0050785227084457615,"score_gpt":0.20407490008749332,"score_spread":0.19899637737904757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313030987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98748314,0.004360708,0.0069252625,0.00016567994,0.00009067514,0.000056426717,0.00010808878,0.00006268227,0.0007473497],"genre_scores_gemma":[0.99444395,0.00080604927,0.0038352828,0.00005614349,0.000029934397,0.000057880065,0.00006689432,0.000008361531,0.00069544336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962413,0.000107379085,0.000043891123,0.000049939717,0.000074698495,0.000099962584],"domain_scores_gemma":[0.99976414,0.00005279984,0.000058271347,0.000034298653,0.000031115655,0.000059394813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048264198,0.0008279793,0.00062057015,0.00024590603,0.00018585769,0.00037987274,0.0001962689,0.0005446863,0.0007038061],"category_scores_gemma":[0.00019406191,0.00018474809,0.00048355997,0.00011256239,0.00038955576,0.00032899991,0.00035801283,0.00066712947,0.0002828972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020135604,0.000027047925,0.00029115277,0.000054794804,0.000004466248,0.0000878991,0.00001620768,0.000035738147,0.99868125,0.000029945062,0.000007828364,0.000562385],"study_design_scores_gemma":[0.000032070384,0.0005246295,0.0037674876,0.000016256681,0.0000253399,0.00032036437,0.000054217417,0.0006785705,0.99379337,0.000062003266,0.00072132365,0.00000432396],"about_ca_topic_score_codex":0.0001807673,"about_ca_topic_score_gemma":0.00025423054,"teacher_disagreement_score":0.0008279793,"about_ca_system_score_codex":0.00020994432,"about_ca_system_score_gemma":0.00022608532,"threshold_uncertainty_score":0.0025525093},"labels":[],"label_agreement":null},{"id":"W4313222839","doi":"10.1002/eji.202149691","title":"Regulation of DC metabolism by nitric oxide in murine GM‐CSF cultures","year":2022,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Nitric oxide; Metabolism; Cell biology; Immunology; Biochemistry; Endocrinology","score_opus":0.005637168360226516,"score_gpt":0.20471810170304364,"score_spread":0.19908093334281712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313222839","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9630255,0.010161529,0.012617768,0.00035631904,0.00023322344,0.000482657,0.003482645,0.0002537253,0.009386567],"genre_scores_gemma":[0.9609025,0.0045913206,0.025461165,0.0002722246,0.00010854184,0.0006709229,0.0027171534,0.00012387629,0.005152171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999564,0.00009054452,0.00005525224,0.00009122891,0.00013036432,0.00006856503],"domain_scores_gemma":[0.99964976,0.00006372881,0.000076971315,0.000057870788,0.000066481625,0.00008520712],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003335232,0.00046605905,0.00045741204,0.00042472122,0.00021393385,0.0004528597,0.00046655667,0.00032814412,0.0009475536],"category_scores_gemma":[0.00022237097,0.00013364386,0.0002219137,0.00031875138,0.00028449,0.00017329544,0.00038309305,0.0010663951,0.0006240172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050570606,0.000100225625,0.00026610473,0.000103891965,0.0000040272225,0.000073909214,0.00007109779,0.0002551501,0.9956126,0.0001614504,0.00013533318,0.002710501],"study_design_scores_gemma":[0.000036047077,0.00035702012,0.0016962822,0.000031094594,0.000017406708,0.000099622324,0.000019648873,0.0010550119,0.98936206,0.00006176518,0.007255131,0.000008803978],"about_ca_topic_score_codex":0.0006909799,"about_ca_topic_score_gemma":0.0012438992,"teacher_disagreement_score":0.0009475536,"about_ca_system_score_codex":0.0006013033,"about_ca_system_score_gemma":0.00029116456,"threshold_uncertainty_score":0.0043628216},"labels":[],"label_agreement":null},{"id":"W4313349467","doi":"10.4049/jimmunol.190.supp.131.12","title":"The p110δ isoform of PI3K modulates TLR4 signalling and is crucial for survival from endotoxin and <i>Escherichia coli</i> infection (P4023)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"TLR4; Proinflammatory cytokine; Sepsis; Inflammation; Immune system; Escherichia coli infection; Biology; Immunology; Escherichia coli; Spleen; PI3K/AKT/mTOR pathway; Microbiology; Signal transduction; Cell biology; Gene","score_opus":0.009590146233530472,"score_gpt":0.21668463588210873,"score_spread":0.20709448964857827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313349467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939031,0.0017803799,0.0017901883,0.00032313325,0.000058462534,0.000017513958,0.00035091795,0.00007769915,0.001698741],"genre_scores_gemma":[0.996507,0.0009493906,0.0007216579,0.00008757058,0.000011113068,0.00001975302,0.00028147773,0.000013092308,0.0014089198],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989057,0.00001492861,0.0000107842425,0.000025093443,0.000022052409,0.000036609068],"domain_scores_gemma":[0.99993277,0.00000396849,0.00003080983,0.000005686693,0.000005077369,0.000021751746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009901393,0.00026915973,0.00016100588,0.00014665206,0.00014064109,0.00040082537,0.00019851423,0.00026300852,0.0010348014],"category_scores_gemma":[0.000097586155,0.00012974968,0.00018745805,0.00013957404,0.000267789,0.00018466145,0.0002028492,0.00071618287,0.00039940857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042732852,0.00004100597,0.00040826792,0.000044089546,0.0000058147966,0.00007024557,0.0000068443405,0.00004729536,0.9962748,0.00015009133,0.00010036079,0.0024238538],"study_design_scores_gemma":[0.00009992837,0.0006482251,0.017766263,0.000017297298,0.00003361429,0.0008923344,0.000046383124,0.0009077378,0.974295,0.00025075243,0.0050334623,0.000009114001],"about_ca_topic_score_codex":0.00025515186,"about_ca_topic_score_gemma":0.00023252159,"teacher_disagreement_score":0.0010348014,"about_ca_system_score_codex":0.00024034639,"about_ca_system_score_gemma":0.00017506086,"threshold_uncertainty_score":0.0034617186},"labels":[],"label_agreement":null},{"id":"W4313349526","doi":"10.4049/jimmunol.190.supp.130.25","title":"Understanding altered toll-like receptor function in the elderly (P4251)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TLR2; Immunology; Immune system; Receptor; Cytokine; Immunogenicity; Immunity; Pattern recognition receptor; Biology; Tuberculosis; Chemokine; Toll-like receptor; Disease; Mycobacterium tuberculosis; Medicine; TLR4; Innate immune system; Internal medicine","score_opus":0.03536902457019388,"score_gpt":0.2313070332510242,"score_spread":0.19593800868083033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313349526","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9658838,0.022725398,0.00502961,0.0017301665,0.0002578496,0.000031012398,0.0012332104,0.000055850163,0.0030531317],"genre_scores_gemma":[0.9811936,0.011470504,0.0018574527,0.00087421795,0.00018766889,0.00004406646,0.0007729384,0.000013395748,0.0035862406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999471,0.000009110695,0.0000064769647,0.000015001928,0.000008402191,0.000014085227],"domain_scores_gemma":[0.9999151,0.000006166489,0.000039526796,0.0000072974267,0.0000116708125,0.000020200847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021699918,0.00034634737,0.00024364947,0.00024871147,0.00011439117,0.0002640666,0.00017645248,0.00039857219,0.0018612391],"category_scores_gemma":[0.000120252575,0.00011631707,0.00025084216,0.00016490655,0.00017762365,0.0004474645,0.00023670409,0.0004432193,0.00080039544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015646465,0.00018570016,0.040882878,0.00045823326,0.00007773582,0.0022427288,0.00013401873,0.00017571513,0.9008232,0.0011863679,0.0033149212,0.04895387],"study_design_scores_gemma":[0.00016009912,0.00287132,0.7481581,0.00028890104,0.00032363,0.017089032,0.00073461107,0.0019450254,0.17030694,0.003862746,0.054213103,0.00004650777],"about_ca_topic_score_codex":0.00029551642,"about_ca_topic_score_gemma":0.00021253547,"teacher_disagreement_score":0.0018612391,"about_ca_system_score_codex":0.00011449615,"about_ca_system_score_gemma":0.00011623614,"threshold_uncertainty_score":0.00622648},"labels":[],"label_agreement":null},{"id":"W4313349591","doi":"10.4049/jimmunol.190.supp.202.10","title":"Mechanisms of CD154 release from T cells and subsequent biological activities (P3375)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"CD154; Jurkat cells; Cell biology; CD40; Biology; Signal transduction; Immune system; Transmembrane protein; T cell; Cell signaling; Cell; Chemistry; Cytotoxic T cell; Immunology; Biochemistry; Receptor; In vitro","score_opus":0.01131055176274188,"score_gpt":0.20553601905036387,"score_spread":0.194225467287622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313349591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696241,0.015844723,0.0065606814,0.00042556986,0.00009823943,0.00016079252,0.00042107215,0.00009522626,0.006769582],"genre_scores_gemma":[0.9928542,0.0019767105,0.0014050998,0.00008704903,0.000029416238,0.000052324867,0.0002397775,0.000006336616,0.0033489943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984765,0.000023344712,0.000009070311,0.000017231643,0.000044122215,0.000058626232],"domain_scores_gemma":[0.9999392,0.000010748459,0.000015308568,0.0000066382217,0.000010476438,0.00001761896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015641488,0.00045018233,0.00018280759,0.00028263274,0.00019661653,0.00040367717,0.00024037824,0.00046557328,0.002220055],"category_scores_gemma":[0.00013198395,0.00009025199,0.00037441368,0.000120754376,0.00022914265,0.00027394047,0.0003348722,0.00053413585,0.00079136976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034250948,0.000051885676,0.00023359235,0.00015637382,0.000010405784,0.00066810416,0.000031597494,0.00009151177,0.9927288,0.00093857275,0.00016736735,0.0045793317],"study_design_scores_gemma":[0.00009037664,0.00083346217,0.008004224,0.000048187176,0.0000381552,0.002012208,0.00008744697,0.0012443358,0.9800587,0.0009034549,0.006668492,0.000010758906],"about_ca_topic_score_codex":0.00056173356,"about_ca_topic_score_gemma":0.0002910874,"teacher_disagreement_score":0.002220055,"about_ca_system_score_codex":0.0003909425,"about_ca_system_score_gemma":0.00018902405,"threshold_uncertainty_score":0.007426858},"labels":[],"label_agreement":null},{"id":"W4313354584","doi":"10.4049/jimmunol.190.supp.112.28","title":"p62/SQSTM1 enhances NOD2-mediated signaling and cytokine production through stabilizing NOD2 oligomers (P4189)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"NOD2; Muramyl dipeptide; Cell biology; Peptidoglycan; Inflammasome; Receptor; TLR4; Signal transduction; Ubiquitin; Pattern recognition receptor; Chemistry; Biology; Biochemistry; Innate immune system","score_opus":0.010867449060111034,"score_gpt":0.22495993947695664,"score_spread":0.2140924904168456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313354584","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968837,0.00082140137,0.001122822,0.00008962839,0.000033948512,0.00001930517,0.000098492,0.00007640951,0.00085415447],"genre_scores_gemma":[0.99739504,0.0002692383,0.0009040351,0.000039368035,0.000012827442,0.000022684866,0.00014463044,0.000011923638,0.0012001067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998678,0.00003316495,0.0000129478085,0.00002230368,0.000030823227,0.000032830183],"domain_scores_gemma":[0.9999182,0.0000110018,0.00001868516,0.000009342397,0.000009541088,0.00003316687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016147789,0.00034974655,0.00027002723,0.00015752786,0.00015064568,0.0001942263,0.00013391927,0.0002785632,0.0015740487],"category_scores_gemma":[0.00010531944,0.00009690134,0.00017498042,0.00012090428,0.0002604535,0.00021065376,0.0002061878,0.0004903341,0.00037331466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002546893,0.000095494746,0.00005015039,0.000038793194,0.000004333395,0.000033816184,0.000007195275,0.000045252695,0.9986619,0.000049388844,0.00006207328,0.00069707585],"study_design_scores_gemma":[0.00006885759,0.0008642078,0.0013640776,0.000005001913,0.000008778706,0.00015439019,0.00001840223,0.0011393279,0.99531734,0.0000525188,0.0010035225,0.0000036404026],"about_ca_topic_score_codex":0.00020309091,"about_ca_topic_score_gemma":0.00023173967,"teacher_disagreement_score":0.0015740487,"about_ca_system_score_codex":0.00014001994,"about_ca_system_score_gemma":0.00012007359,"threshold_uncertainty_score":0.0052657127},"labels":[],"label_agreement":null},{"id":"W4313356086","doi":"10.4049/jimmunol.198.supp.129.1","title":"TLR9 activation impairs phagocytosis-induced neutrophil apoptosis and prolongs <i>E. coli</i>-induced acute lung injury","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Phagocytosis; Neutrophil elastase; Neutrophil extracellular traps; TLR9; Biology; Molecular biology; DNA damage; Elastase; Immunology; Microbiology; DNA; Inflammation; DNA methylation; Biochemistry; Enzyme; Gene; Gene expression","score_opus":0.012581789407196209,"score_gpt":0.26360608619862164,"score_spread":0.2510242967914254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99479455,0.0012167293,0.002058279,0.0001299196,0.00006758221,0.00006219626,0.0004890753,0.00014996328,0.0010316182],"genre_scores_gemma":[0.9950648,0.00053876475,0.0014153663,0.00011513992,0.000018534483,0.00009819498,0.00071065687,0.000017210736,0.0020214384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999605,0.00008068502,0.000054343214,0.000052941483,0.000059878814,0.00014719396],"domain_scores_gemma":[0.9998209,0.000020009766,0.00006127187,0.000020441938,0.000016626027,0.00006085777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002578247,0.0004950187,0.00047308416,0.0001902636,0.00011050438,0.00023426667,0.00025479935,0.0005205158,0.0017955474],"category_scores_gemma":[0.00016312247,0.00017914153,0.00038445622,0.000116351686,0.0002545223,0.00017660852,0.00020634022,0.0009902942,0.0005647533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006924385,0.0001548194,0.00008927114,0.00005460414,0.0000066745074,0.00004285985,0.0000073968754,0.000037827223,0.99808335,0.00004127673,0.00004843914,0.00074093865],"study_design_scores_gemma":[0.000055981633,0.0016757254,0.0026703004,0.000011329883,0.000013813415,0.0001755338,0.00001941681,0.00057445234,0.993999,0.000027096212,0.0007729696,0.000004482002],"about_ca_topic_score_codex":0.00035976493,"about_ca_topic_score_gemma":0.00047835652,"teacher_disagreement_score":0.0017955474,"about_ca_system_score_codex":0.00025745353,"about_ca_system_score_gemma":0.00021511118,"threshold_uncertainty_score":0.0060067177},"labels":[],"label_agreement":null},{"id":"W4313356300","doi":"10.4049/jimmunol.198.supp.148.6","title":"The flavonoid galangin induces release of neutrophil extracellular traps and enhances resolution of <i>E. coli</i> pneumonia","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Galangin; Phagocytosis; Inflammation; Neutrophil extracellular traps; Biology; Apoptosis; Respiratory burst; Microbiology; Escherichia coli; Immunology; Cell biology; Biochemistry; Flavonoid","score_opus":0.009661132347278036,"score_gpt":0.2283936873502348,"score_spread":0.21873255500295677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356300","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99589217,0.0013241142,0.001503823,0.0001137147,0.000034862347,0.000039110793,0.00018133264,0.000095236064,0.0008156032],"genre_scores_gemma":[0.99697864,0.00044455627,0.0013442186,0.00009320428,0.000012827602,0.000025201169,0.00025343525,0.000009611994,0.000838214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993265,0.000015483689,0.000005246636,0.000011223072,0.000012714363,0.00002258894],"domain_scores_gemma":[0.9999362,0.000008264283,0.000018603083,0.0000052821997,0.000006764308,0.000024891182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012757,0.00031169562,0.00024781082,0.00018366336,0.00006993356,0.00016364935,0.00012862658,0.00032442348,0.00076823327],"category_scores_gemma":[0.00010416464,0.00007924634,0.000255624,0.000074707605,0.00018270478,0.00019024237,0.00012470508,0.0005606937,0.00014337781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044188337,0.00009239176,0.00006384227,0.00003656565,0.000004977998,0.000023840832,0.0000063024304,0.000035067387,0.99797255,0.00003064515,0.00003907937,0.0012528419],"study_design_scores_gemma":[0.00007529185,0.0023174256,0.0031393303,0.000007774824,0.000013561925,0.00014474183,0.000016102329,0.000588792,0.9926345,0.000044238837,0.0010137637,0.000004478689],"about_ca_topic_score_codex":0.00026129218,"about_ca_topic_score_gemma":0.00028708964,"teacher_disagreement_score":0.00076823327,"about_ca_system_score_codex":0.0001453102,"about_ca_system_score_gemma":0.00012564169,"threshold_uncertainty_score":0.002570033},"labels":[],"label_agreement":null},{"id":"W4313356427","doi":"10.4049/jimmunol.196.supp.202.20","title":"Glucocorticoids enhance neutrophil survival via G-CSF","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Glucocorticoid; Proinflammatory cytokine; Inflammation; Glucocorticoid receptor; Immunology; Medicine; Biology","score_opus":0.00736829759050908,"score_gpt":0.22904382960879388,"score_spread":0.2216755320182848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356427","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9868483,0.007643843,0.0023187804,0.00044504597,0.00010859098,0.00003626356,0.00084612495,0.00019534635,0.00155768],"genre_scores_gemma":[0.9955379,0.0012547043,0.0013133524,0.00011348273,0.000018730625,0.000018711005,0.00032295837,0.000011440896,0.0014086473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998667,0.000033237546,0.000010653938,0.000020348032,0.00003227687,0.000036813704],"domain_scores_gemma":[0.99989426,0.00001591581,0.000027339154,0.000015180164,0.000011984348,0.000035265868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000799463,0.00024864153,0.00019958825,0.00014193889,0.000066043074,0.00027190457,0.00012187439,0.00019314022,0.00094849704],"category_scores_gemma":[0.00011004003,0.00006390783,0.00019761756,0.0000723361,0.0001594559,0.00012217634,0.00019628518,0.0004993715,0.00032093556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018779244,0.000015760614,0.00012337395,0.000040529776,0.0000035587425,0.00002869664,0.000004953176,0.00002260471,0.99791676,0.00004062912,0.00010046236,0.0015148207],"study_design_scores_gemma":[0.00006163527,0.00074915605,0.009237892,0.000022794156,0.000022418286,0.00026882105,0.00003575697,0.0003909677,0.9823699,0.00008111567,0.006754536,0.0000050802178],"about_ca_topic_score_codex":0.00050239416,"about_ca_topic_score_gemma":0.0008373892,"teacher_disagreement_score":0.00094849704,"about_ca_system_score_codex":0.00020043441,"about_ca_system_score_gemma":0.00017736793,"threshold_uncertainty_score":0.0031729937},"labels":[],"label_agreement":null},{"id":"W4313356436","doi":"10.4049/jimmunol.196.supp.203.8","title":"Comparison of the TLR7 and TLR9 innate immune signaling pathways in african green monkeys and rhesus macaques","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"TLR7; Innate immune system; Biology; TLR9; Immune system; Immunology; Acquired immune system; Pattern recognition receptor; Plasmacytoid dendritic cell; Dendritic cell; Toll-like receptor; Gene; Genetics; Gene expression","score_opus":0.017330772317997435,"score_gpt":0.24502766932689185,"score_spread":0.22769689700889442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356436","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986512,0.00047042023,0.00017057692,0.000040060353,0.000007338839,0.00001228388,0.0001333257,0.0000048121574,0.00050982664],"genre_scores_gemma":[0.9972379,0.00043411722,0.0006255985,0.00008742104,0.000009756089,0.00010201526,0.00028226426,0.000005600164,0.0012152846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999056,0.000023377479,0.0000053118524,0.000021803718,0.000012227268,0.000031584936],"domain_scores_gemma":[0.9999273,0.000012874084,0.000014825316,0.000007679655,0.000013529586,0.000023821261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015037284,0.00016224339,0.00020064742,0.0003476801,0.00026069523,0.00022448914,0.000076733115,0.0001836173,0.001293965],"category_scores_gemma":[0.00018376354,0.00007804305,0.00017453419,0.00011606634,0.00027760188,0.0001505585,0.00015344603,0.00027172474,0.00017032021],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018759889,0.00015551677,0.012984494,0.000093641735,0.00003239831,0.0002533074,0.00037623022,0.000067904235,0.9765519,0.00021683522,0.00010447905,0.0072873547],"study_design_scores_gemma":[0.000113038186,0.0072815567,0.74108094,0.000067726185,0.00018227118,0.0030468607,0.002895246,0.0015151902,0.22802496,0.000897854,0.014855212,0.000039140577],"about_ca_topic_score_codex":0.0012718042,"about_ca_topic_score_gemma":0.0017502009,"teacher_disagreement_score":0.001293965,"about_ca_system_score_codex":0.00016002954,"about_ca_system_score_gemma":0.00016986544,"threshold_uncertainty_score":0.0043287277},"labels":[],"label_agreement":null},{"id":"W4313356511","doi":"10.4049/jimmunol.196.supp.216.8","title":"The role of IRF7 and NF-κB pathways in the induction of antiviral responses in chicken tracheal epithelial cells following exposure to TLR3 and 4 ligands","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"TLR3; IRF7; Immune system; Biology; Viral replication; Cell biology; Toll-like receptor; Chemistry; Virology; Innate immune system; Immunology; Virus","score_opus":0.008202392769133374,"score_gpt":0.21838155247349422,"score_spread":0.21017915970436085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98638445,0.006919029,0.0025084587,0.00026684496,0.00009913012,0.000060313712,0.0009918379,0.000050198003,0.0027197374],"genre_scores_gemma":[0.9912661,0.0016203143,0.0025165519,0.00014943407,0.000017158656,0.00010734322,0.0010795849,0.000011287274,0.0032323243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998418,0.00002635811,0.000020104026,0.000032993103,0.0000309171,0.000047767764],"domain_scores_gemma":[0.9999114,0.000013915496,0.000020671185,0.000009588355,0.000021960986,0.000022480232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014892209,0.00029732793,0.0002483918,0.000250068,0.00022270155,0.00022676839,0.00016205755,0.00041442676,0.0016828481],"category_scores_gemma":[0.00007301249,0.00014642347,0.000499985,0.0000941661,0.0002156671,0.00022501456,0.0001628078,0.0005736328,0.00047815684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117015086,0.0000161806,0.00022063666,0.00007753641,0.0000032099563,0.000043403194,0.000017983493,0.000016980086,0.9989932,0.000021090122,0.000020049567,0.00045260479],"study_design_scores_gemma":[0.000021821013,0.00049885217,0.020998146,0.000035260393,0.00002469567,0.0003241512,0.0002293393,0.0006854762,0.9741616,0.00006889352,0.0029428843,0.000008795591],"about_ca_topic_score_codex":0.0007204665,"about_ca_topic_score_gemma":0.00088618946,"teacher_disagreement_score":0.0016828481,"about_ca_system_score_codex":0.00020531853,"about_ca_system_score_gemma":0.00021843691,"threshold_uncertainty_score":0.0056296587},"labels":[],"label_agreement":null},{"id":"W4313356512","doi":"10.4049/jimmunol.196.supp.54.11","title":"IL-17A is rapidly triggered by staphylococcal superantigens and is pathogenic in toxic shock syndrome","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; University of British Columbia; Western University","funders":"","keywords":"Superantigen; Toxic shock syndrome; Immunology; Pathogenesis; Peripheral blood mononuclear cell; Cytokine; Chemokine; Biology; Staphylococcus aureus; Inflammation; Immune system; T cell; In vitro","score_opus":0.00709479621970544,"score_gpt":0.21251639599860195,"score_spread":0.2054215997788965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356512","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99506724,0.0013984259,0.0022399847,0.000071561066,0.000053763197,0.000031784937,0.00020254136,0.000082515035,0.00085218024],"genre_scores_gemma":[0.9979018,0.00055042945,0.0007196413,0.000056297245,0.000039562794,0.000028623263,0.00022487588,0.000012033943,0.00046662468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987495,0.000025108156,0.000017129249,0.000021264132,0.000024288245,0.000037164715],"domain_scores_gemma":[0.9998055,0.00003344626,0.00006058172,0.000022942575,0.000028173652,0.000049460636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017218612,0.0004655768,0.00024120267,0.00038156027,0.00013709516,0.00027298724,0.00010153025,0.00024202459,0.0015929594],"category_scores_gemma":[0.00022212771,0.00014291372,0.00030411303,0.00014965163,0.0002656765,0.00013393397,0.00020312675,0.00051359704,0.00036369215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004660414,0.000068117006,0.011620714,0.00006959935,0.00001638751,0.0030188425,0.00005159218,0.000087319124,0.9805634,0.000106745916,0.00011805784,0.0038132425],"study_design_scores_gemma":[0.00018455155,0.0023838498,0.18929997,0.00010345228,0.0001310861,0.03152294,0.0004344146,0.0028930705,0.7632548,0.0008489856,0.008916695,0.000026184238],"about_ca_topic_score_codex":0.00011045445,"about_ca_topic_score_gemma":0.00009162479,"teacher_disagreement_score":0.0015929594,"about_ca_system_score_codex":0.00012558467,"about_ca_system_score_gemma":0.00012384038,"threshold_uncertainty_score":0.005329013},"labels":[],"label_agreement":null},{"id":"W4313356676","doi":"10.4049/jimmunol.194.supp.52.17","title":"Staphylococcal superantigens trigger rapid human IL-17A production by a novel population of memory T cells (HUM1P.268)","year":2015,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Superantigen; Toxic shock syndrome; Peripheral blood mononuclear cell; Immunology; Cytokine; Staphylococcus aureus; Pathogenesis; Biology; Population; Enterotoxin; Inflammation; Systemic inflammatory response syndrome; In vitro; Microbiology; Medicine; Sepsis; T cell; Immune system; Bacteria; Gene; Escherichia coli","score_opus":0.019092989510807266,"score_gpt":0.24030879345170938,"score_spread":0.22121580394090212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313356676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973737,0.00057659345,0.00083499344,0.000037614696,0.000023861066,0.00004048887,0.0002569579,0.000052726675,0.00080307963],"genre_scores_gemma":[0.997145,0.00029057797,0.0007411229,0.00010459689,0.00004201619,0.00006459452,0.00046623786,0.000018542964,0.00112738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998795,0.000019338013,0.000008246377,0.000024270388,0.000019152969,0.00004953393],"domain_scores_gemma":[0.9999012,0.000021370732,0.000022362037,0.000013998423,0.000011253392,0.000029793891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013378118,0.00035668473,0.00024767217,0.00024095076,0.00010159457,0.0002656195,0.0001450032,0.00022587246,0.0021226974],"category_scores_gemma":[0.00018698764,0.00014269285,0.00024317417,0.00010817122,0.0001544367,0.000113995025,0.00021246092,0.0004384721,0.0006793102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068878534,0.00009541093,0.0023098278,0.000055687266,0.000008956264,0.0007523885,0.000048167352,0.000049213955,0.99152195,0.000070603724,0.00017716475,0.004221904],"study_design_scores_gemma":[0.00054444233,0.0068575977,0.11312713,0.00006705162,0.00011940153,0.01279469,0.0004451498,0.002759609,0.8528786,0.00071103714,0.009662688,0.00003274842],"about_ca_topic_score_codex":0.00013991343,"about_ca_topic_score_gemma":0.0001477394,"teacher_disagreement_score":0.0021226974,"about_ca_system_score_codex":0.000111134315,"about_ca_system_score_gemma":0.000092939204,"threshold_uncertainty_score":0.0071011186},"labels":[],"label_agreement":null},{"id":"W4313360721","doi":"10.3390/ijms24010641","title":"Acute Inflammation in Tissue Healing","year":2022,"lang":"en","type":"review","venue":"International Journal of Molecular Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":226,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Inflammation; Tissue repair; Wound healing; Collateral damage; Innate immune system; Immune system; Biology; Immunology; Medicine; Bioinformatics; Cell biology; Psychology","score_opus":0.03145470652903157,"score_gpt":0.35648335855217916,"score_spread":0.32502865202314757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313360721","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000067790344,0.9981858,0.00010781747,0.00022582005,0.00048822552,0.0000025623535,0.0000061747564,0.0000062242784,0.0009095399],"genre_scores_gemma":[0.00081220473,0.99756527,0.000118556796,0.00022679144,0.00047937472,0.0000051864536,0.000011384377,0.0000015184324,0.00077966996],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99976045,0.000042880314,0.000031133943,0.00004272695,0.00009521147,0.000027650332],"domain_scores_gemma":[0.99979204,0.00008058122,0.000029924411,0.000009568039,0.000058872116,0.000028993392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045760634,0.00094504666,0.0011546721,0.0016779965,0.00044690544,0.0014534647,0.0007390466,0.0014031543,0.0037228207],"category_scores_gemma":[0.0005032641,0.00023532983,0.00034986594,0.0015970621,0.0009361619,0.0016668395,0.0010031067,0.0023954953,0.0029859801],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010659659,0.00007232841,0.0001576177,0.019322475,0.000052320953,0.00031780842,0.0001807232,0.0003566637,0.0052696373,0.017255189,0.06175939,0.8951493],"study_design_scores_gemma":[0.000007894291,0.00006293634,0.00040733838,0.0022146762,0.000023806526,0.0012708365,0.000067513894,0.000044626726,0.000528351,0.0051315865,0.99022806,0.000012429903],"about_ca_topic_score_codex":0.0005952544,"about_ca_topic_score_gemma":0.00079535844,"teacher_disagreement_score":0.0037228207,"about_ca_system_score_codex":0.0007737686,"about_ca_system_score_gemma":0.0011103378,"threshold_uncertainty_score":0.012454033},"labels":[],"label_agreement":null},{"id":"W4313366220","doi":"10.4049/jimmunol.202.supp.191.18","title":"Short- and long-term impact of prebiotic supplementation during infancy on immune activity in Wistar rats","year":2019,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Health Canada; University of Alberta; Ontario Tech University","funders":"","keywords":"Internal medicine; Endocrinology; Spleen; Immune system; Weaning; Fructooligosaccharide; Lipopolysaccharide; TLR2; Biology; Prebiotic; Stimulation; TLR4; Immunology; Medicine; Biochemistry","score_opus":0.008466228568358686,"score_gpt":0.27135909421852944,"score_spread":0.2628928656501708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313366220","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984383,0.00044812655,0.00033548105,0.000039505434,0.000021125275,0.000023472876,0.00030889062,0.000028152197,0.0003569708],"genre_scores_gemma":[0.98951054,0.0012219993,0.0017544559,0.00011178775,0.000021014594,0.00018824278,0.0007029737,0.00002870213,0.006460352],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99973243,0.000029856155,0.000021111142,0.0000799105,0.00005798955,0.00007864024],"domain_scores_gemma":[0.9995307,0.000031326796,0.00014396988,0.00004973544,0.000058757963,0.00018560236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022585114,0.00065267907,0.0005084812,0.00057221187,0.00022680925,0.00028615017,0.00025648382,0.00034853528,0.0015387344],"category_scores_gemma":[0.00021419632,0.00024546916,0.00035472048,0.00019121458,0.00043962998,0.00032068786,0.00034983692,0.0012389566,0.00041364264],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004801389,0.0010576062,0.001953515,0.00008925622,0.000018889443,0.0001750915,0.00009733773,0.00006240823,0.985698,0.00004940326,0.00006921645,0.0059280386],"study_design_scores_gemma":[0.00019823493,0.033355065,0.062851235,0.00004746938,0.00016299504,0.00043735243,0.0007468317,0.00041118544,0.89820206,0.00011754645,0.0034203227,0.000049756833],"about_ca_topic_score_codex":0.00092844584,"about_ca_topic_score_gemma":0.0020178834,"teacher_disagreement_score":0.0015387344,"about_ca_system_score_codex":0.000289392,"about_ca_system_score_gemma":0.00038726264,"threshold_uncertainty_score":0.0051475167},"labels":[],"label_agreement":null},{"id":"W4313373159","doi":"10.4049/jimmunol.204.supp.149.6","title":"CD169+ macrophages subsets are critical for regulating inflammation during sepsis","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Sepsis; Septic shock; Macrophage; Inflammation; Biology; Mediator; Immunology; Immune system; Receptor; Lipopolysaccharide; Innate immune system; Signal transduction; Cell biology","score_opus":0.016892480214584404,"score_gpt":0.25856099571594776,"score_spread":0.24166851550136337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313373159","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98674625,0.004716487,0.004891486,0.00032865602,0.00018342564,0.000082287756,0.00054169976,0.000094790696,0.0024149795],"genre_scores_gemma":[0.991557,0.0015944494,0.003532037,0.00019579014,0.00010177326,0.000079215904,0.00048618598,0.000029631155,0.0024240343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997949,0.000030689487,0.000028853654,0.00003966118,0.000046319645,0.00005954887],"domain_scores_gemma":[0.99980587,0.000012954515,0.00007375895,0.000012403277,0.00002395507,0.00007103571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020325849,0.00035907875,0.0002650172,0.0002889941,0.00023572326,0.00037616567,0.00018520403,0.000323189,0.0017431463],"category_scores_gemma":[0.00014813466,0.00016950851,0.00020875408,0.00008998001,0.00026886322,0.00026271757,0.0003728337,0.0006027044,0.0007240566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023287162,0.000017795312,0.0006440572,0.00004563627,0.0000024950666,0.00011326787,0.000010550877,0.000017572784,0.9975668,0.00011182044,0.000044640667,0.0011925529],"study_design_scores_gemma":[0.00007900237,0.001067483,0.03158215,0.00006427921,0.000058363854,0.0030232258,0.00022736425,0.000611139,0.9542621,0.00071531703,0.00828953,0.000020094285],"about_ca_topic_score_codex":0.00009574905,"about_ca_topic_score_gemma":0.0001437636,"teacher_disagreement_score":0.0017431463,"about_ca_system_score_codex":0.00014167899,"about_ca_system_score_gemma":0.00023464873,"threshold_uncertainty_score":0.005831361},"labels":[],"label_agreement":null},{"id":"W4313373236","doi":"10.4049/jimmunol.204.supp.148.47","title":"CONTRIBUTIONS OF FEVER TO THE PROMOTION OF CELLULAR ANTIMICROBIAL DEFENSES","year":2020,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immune system; Biology; Pathogen; Immunology; In vivo; Function (biology); Phenotype; Cell biology; Ex vivo; Gene; Genetics","score_opus":0.012827732421316507,"score_gpt":0.2284463862606499,"score_spread":0.21561865383933337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313373236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902278,0.0036287287,0.0046132016,0.00007300165,0.000030744264,0.000018132441,0.000080025675,0.000028955144,0.0012994449],"genre_scores_gemma":[0.9978528,0.00049466704,0.0012294726,0.00002275657,0.000015261292,0.000009720541,0.000025002737,0.000002782555,0.0003475964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998628,0.0000439967,0.0000074343698,0.000022630786,0.000022020275,0.000041118186],"domain_scores_gemma":[0.9998487,0.000039684164,0.000036978807,0.000022539058,0.0000212865,0.00003072866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026716525,0.00022277568,0.00022115708,0.00015780781,0.00016610244,0.0004879785,0.000085332904,0.00017899963,0.00085153064],"category_scores_gemma":[0.00017977138,0.000067637,0.0001720468,0.000078256635,0.00036106113,0.00021403526,0.00025931915,0.0003209968,0.000114636096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014588126,0.000014196485,0.0012712431,0.00003864223,0.000002510811,0.000036059453,0.000019057585,0.000094668816,0.9949426,0.00019141527,0.0000140758,0.003229643],"study_design_scores_gemma":[0.000015122444,0.0013004245,0.051549967,0.000024427705,0.000027352984,0.00047932373,0.00016257507,0.0018027172,0.9414978,0.00056682486,0.0025605413,0.000012883746],"about_ca_topic_score_codex":0.00016387452,"about_ca_topic_score_gemma":0.00016300663,"teacher_disagreement_score":0.00085153064,"about_ca_system_score_codex":0.00024394282,"about_ca_system_score_gemma":0.00015962066,"threshold_uncertainty_score":0.0028486848},"labels":[],"label_agreement":null},{"id":"W4313380595","doi":"10.4049/jimmunol.196.supp.55.27","title":"Role of GITR and its ligand in sustaining T cell responses against influenza infection","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Social Innovation; University of Toronto","funders":"","keywords":"Immunology; CD8; T cell; Cytotoxic T cell; Influenza A virus; Lung; Biology; Antigen; Immune system; Virus; Medicine; In vitro; Internal medicine","score_opus":0.009127435073534518,"score_gpt":0.23593104843716,"score_spread":0.22680361336362548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313380595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923983,0.0038902976,0.0013053943,0.00016293536,0.000033090804,0.000028640983,0.00023286432,0.00011628917,0.0018320066],"genre_scores_gemma":[0.99620676,0.0005684169,0.0018424006,0.00008571268,0.00002107368,0.000022358423,0.00027042563,0.000019342628,0.00096355897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998005,0.000046936,0.000011661498,0.000030249239,0.00003257847,0.00007808345],"domain_scores_gemma":[0.9998217,0.000020397476,0.000037113154,0.00001792482,0.000016496402,0.00008643876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013166643,0.00028077257,0.00023002987,0.00017550777,0.00015017253,0.00030425048,0.00033883986,0.00043370962,0.0013713046],"category_scores_gemma":[0.00020214388,0.00011161625,0.00021637132,0.000078564706,0.0002307926,0.00020368976,0.0002848985,0.0008135093,0.00060021057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021491532,0.000028293345,0.0002725379,0.000045272438,0.0000035676696,0.00008169589,0.000008512704,0.00007068356,0.9977284,0.00004276354,0.000054523072,0.0014488617],"study_design_scores_gemma":[0.00008431246,0.002169968,0.020670079,0.000048329886,0.00006458853,0.0013061191,0.00015266053,0.0033878344,0.96418166,0.0002026012,0.0077119917,0.000019787482],"about_ca_topic_score_codex":0.00034291207,"about_ca_topic_score_gemma":0.0004680215,"teacher_disagreement_score":0.0013713046,"about_ca_system_score_codex":0.00030590867,"about_ca_system_score_gemma":0.00018492223,"threshold_uncertainty_score":0.004587412},"labels":[],"label_agreement":null},{"id":"W4313380776","doi":"10.4049/jimmunol.188.supp.172.33","title":"Cross-talk of Nod1 and Nod2 signaling pathways with IFNγ (172.33)","year":2012,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"NOD1; NOD2; CXCR3; Chemokine; Innate immune system; Biology; Cell biology; Immune system; CD80; Immunology; Chemistry; CD40; Cytotoxic T cell; In vitro; Chemokine receptor; Biochemistry","score_opus":0.012059796372912643,"score_gpt":0.22940646810787674,"score_spread":0.21734667173496408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313380776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92893285,0.037915427,0.018161971,0.0009908194,0.00041701173,0.00023660938,0.0010862721,0.0002125314,0.012046479],"genre_scores_gemma":[0.97591114,0.006452479,0.007514248,0.00036446739,0.00010777714,0.00022010958,0.0008136199,0.000017412207,0.008598712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998079,0.00005557237,0.000019605877,0.000033338252,0.000030601073,0.00005307367],"domain_scores_gemma":[0.99991107,0.000009333371,0.00003886543,0.0000083261675,0.00000850572,0.000023893133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031595276,0.00073235924,0.00020543739,0.00022316941,0.00014046753,0.00031108438,0.00015102421,0.0003041261,0.0031021496],"category_scores_gemma":[0.00009043126,0.00012725484,0.00033495808,0.0001259286,0.00014764236,0.00024971395,0.0004908733,0.0006054178,0.0006059241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036399573,0.00004411476,0.00034548045,0.00023762103,0.000019260808,0.00018357325,0.000015178353,0.000100681886,0.9939236,0.00038869574,0.00013599555,0.004241711],"study_design_scores_gemma":[0.00017619785,0.0010932108,0.01065654,0.0001273718,0.00010110966,0.0019329191,0.00010618416,0.0016992186,0.9612594,0.0005671335,0.022264333,0.000016337486],"about_ca_topic_score_codex":0.00013725396,"about_ca_topic_score_gemma":0.0002088827,"teacher_disagreement_score":0.0031021496,"about_ca_system_score_codex":0.0002102717,"about_ca_system_score_gemma":0.00017060807,"threshold_uncertainty_score":0.010377765},"labels":[],"label_agreement":null},{"id":"W4313381335","doi":"10.4049/jimmunol.202.supp.140.7","title":"The role of mTOR, TRAF1, and local antigen in 4-1BB-dependent establishment of Trm in the lung","year":2019,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Population; Immunology; CD8; Biology; PI3K/AKT/mTOR pathway; Cancer research; Antigen; Medicine; Cell biology; Signal transduction","score_opus":0.0036001465279061253,"score_gpt":0.20960518625090305,"score_spread":0.2060050397229969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313381335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9908635,0.0056970324,0.0014892789,0.00019348666,0.00005343793,0.000042774034,0.00034511747,0.00010331824,0.0012120263],"genre_scores_gemma":[0.9968278,0.0005742357,0.00076228986,0.000044222143,0.000015038855,0.00003025823,0.00018571224,0.000012294202,0.0015479638],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997106,0.000057803318,0.000025198246,0.00005204365,0.00005643114,0.0000978927],"domain_scores_gemma":[0.9998242,0.000013321531,0.000058509908,0.00001372317,0.000024121648,0.00006619061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002730177,0.00040944002,0.00039337098,0.00032307717,0.00026805006,0.00044871174,0.00023343836,0.00043325612,0.0016408891],"category_scores_gemma":[0.00015799841,0.00017040079,0.00038742792,0.00009946542,0.0002883248,0.00031368106,0.00038325635,0.0007962366,0.00073349767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002995716,0.000039569797,0.0003805233,0.00006805764,0.000005635908,0.00005983289,0.000009750047,0.00006536693,0.99782443,0.00010653435,0.000046257635,0.0010945742],"study_design_scores_gemma":[0.00006131262,0.00074741873,0.028958533,0.000027601944,0.000036201298,0.00058728154,0.00010955682,0.0020610222,0.96483153,0.00019459242,0.0023718106,0.000013204625],"about_ca_topic_score_codex":0.00041974834,"about_ca_topic_score_gemma":0.00050746894,"teacher_disagreement_score":0.0016408891,"about_ca_system_score_codex":0.00043113928,"about_ca_system_score_gemma":0.0003130984,"threshold_uncertainty_score":0.0054892898},"labels":[],"label_agreement":null},{"id":"W4313381855","doi":"10.4049/jimmunol.200.supp.175.6","title":"Apoptotic cell induced, TLR9-dependent AhR activity is a critical driver of tolerance induction and suppression of lupus","year":2018,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Krembil Foundation; York University; Princess Margaret Cancer Centre","funders":"","keywords":"Aryl hydrocarbon receptor; TLR9; Inflammation; Immunology; Biology; Acquired immune system; Cytokine; Apoptosis; Innate immune system; Cell biology; Immune system; Autoimmunity; Systemic lupus erythematosus; Cancer research; Transcription factor; Disease; Medicine; Internal medicine; DNA methylation; Gene expression; Gene","score_opus":0.012753461112769447,"score_gpt":0.25707248548520023,"score_spread":0.24431902437243078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313381855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99439394,0.0010346406,0.0032399967,0.00006270654,0.00002320401,0.000012289943,0.00016339462,0.000090749774,0.0009790463],"genre_scores_gemma":[0.9979442,0.00018332816,0.0005854856,0.000018847446,0.0000078025,0.0000059300232,0.00013337344,0.0000064930855,0.001114464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976736,0.000037535057,0.000020713176,0.000047085796,0.00005554458,0.000071708855],"domain_scores_gemma":[0.999803,0.000015258924,0.00006718962,0.00002539927,0.000027440356,0.000061778905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016415211,0.00022541333,0.00022008574,0.00019964422,0.00011915566,0.00031239566,0.00012739399,0.0001868212,0.001766844],"category_scores_gemma":[0.00011933405,0.00009294027,0.00018035187,0.000085827865,0.0001950994,0.00016004205,0.00022788247,0.000600855,0.00048560713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062424224,0.00001386818,0.00032126266,0.000009033781,0.0000014288065,0.000033277618,0.0000042074453,0.000009734331,0.9989188,0.000046213954,0.00001104002,0.0005687974],"study_design_scores_gemma":[0.000014559515,0.00042286827,0.0162582,0.0000068750874,0.0000127996245,0.00078006944,0.00003529078,0.0006301755,0.98030806,0.00012740662,0.0014002265,0.0000034105924],"about_ca_topic_score_codex":0.00009579344,"about_ca_topic_score_gemma":0.00013965086,"teacher_disagreement_score":0.001766844,"about_ca_system_score_codex":0.00016982786,"about_ca_system_score_gemma":0.00012211647,"threshold_uncertainty_score":0.005910635},"labels":[],"label_agreement":null},{"id":"W4313383148","doi":"10.4049/jimmunol.202.supp.74.9","title":"Differential effect of GITR on lung effector T cell subpopulations during influenza infection","year":2019,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"CD8; CXCR3; Immunology; T cell; CX3CR1; Cytotoxic T cell; Adoptive cell transfer; Biology; Effector; Chemokine; Memory T cell; Interleukin 21; Natural killer T cell; Chemokine receptor; Cell biology; Immune system; In vitro","score_opus":0.004315479881231847,"score_gpt":0.22884150209974863,"score_spread":0.22452602221851678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313383148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99834335,0.0004856348,0.00029677612,0.000025592546,0.000008783263,0.000015457208,0.00014957007,0.000020640993,0.0006541593],"genre_scores_gemma":[0.9982736,0.0001891507,0.00047358102,0.00007604429,0.00001098998,0.000028810216,0.00029867666,0.000009221437,0.0006400317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997837,0.000043535914,0.000013975238,0.00003580893,0.000027909682,0.000095197785],"domain_scores_gemma":[0.9998472,0.00002901283,0.000022061191,0.000013289086,0.000024764237,0.00006369138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019732007,0.00022681488,0.0003018219,0.0002144434,0.00013039973,0.00029060186,0.00015303383,0.0003323377,0.0012256375],"category_scores_gemma":[0.00023040806,0.00011129073,0.00022451652,0.000092744966,0.00019800552,0.00017983293,0.00019816398,0.00069769524,0.00035478338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050284696,0.000022374128,0.0011988367,0.000025575338,0.0000040581613,0.000046877325,0.000025009727,0.000018710283,0.99709284,0.000015128209,0.000026519076,0.0010213496],"study_design_scores_gemma":[0.00006193736,0.0026671833,0.14976019,0.00002458478,0.00008116858,0.00074065186,0.0002808413,0.0016196867,0.8432154,0.000100673176,0.0014326075,0.00001511519],"about_ca_topic_score_codex":0.00032632565,"about_ca_topic_score_gemma":0.0003781967,"teacher_disagreement_score":0.0012256375,"about_ca_system_score_codex":0.00018112271,"about_ca_system_score_gemma":0.00009252377,"threshold_uncertainty_score":0.0041002035},"labels":[],"label_agreement":null},{"id":"W4313405647","doi":"10.4049/jimmunol.208.supp.47.04","title":"Characterization of a <i>CLCF1</i> conditional knock-out mice model","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Gene knockin; Conditional gene knockout; Knockout mouse; In vivo; Biology; Immune system; Haematopoiesis; Cell biology; Cytokine; Gene targeting; CRISPR; Immunology; Neuroscience; Cancer research; Phenotype; Stem cell; Gene; Genetics","score_opus":0.010311537761361128,"score_gpt":0.21849686484498426,"score_spread":0.20818532708362314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313405647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8856232,0.0040867636,0.075311996,0.0021391404,0.0010056611,0.0012705658,0.018289387,0.002570545,0.009702606],"genre_scores_gemma":[0.90880173,0.0039229686,0.03353493,0.0009788742,0.00019577895,0.001959892,0.014089453,0.0013849437,0.035131518],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911743,0.00009209374,0.00012022749,0.00029646515,0.00020361747,0.00017016202],"domain_scores_gemma":[0.99907196,0.00012438392,0.00028512877,0.00009696772,0.000107138665,0.00031430097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008094153,0.0013454856,0.0007323871,0.0021296993,0.0007194781,0.0008316879,0.0009199323,0.0013652439,0.006972576],"category_scores_gemma":[0.00044759866,0.00051530916,0.0009791651,0.00047885292,0.0010264429,0.0007021573,0.0005826928,0.0030043544,0.0030644727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024265912,0.00016415444,0.0003135598,0.00008294329,0.000019272618,0.00041638446,0.000055928922,0.00009244877,0.9956737,0.0007487086,0.00048404804,0.0017062329],"study_design_scores_gemma":[0.00031469588,0.0011537715,0.0064757117,0.000107552194,0.00014848828,0.004522763,0.00017826585,0.002556079,0.9585024,0.00043578958,0.025546515,0.00005786517],"about_ca_topic_score_codex":0.0012590297,"about_ca_topic_score_gemma":0.0016738374,"teacher_disagreement_score":0.006972576,"about_ca_system_score_codex":0.00070159015,"about_ca_system_score_gemma":0.00048298502,"threshold_uncertainty_score":0.023325622},"labels":[],"label_agreement":null},{"id":"W4313422208","doi":"10.4049/jimmunol.208.supp.50.15","title":"Lactic acid bacteria derived-bioactive molecules condition an <i>in vitro</i> cell model into a tolerogenic dendritic-like cell phenotype","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture and Agri-Food Canada; Ontario Tech University","funders":"","keywords":"CD80; CD86; Cell biology; Proinflammatory cytokine; Antigen presentation; Biology; Dendritic cell; CD40; Immune system; T cell; Antigen-presenting cell; Chemistry; Immunology; In vitro; Biochemistry; Inflammation; Cytotoxic T cell","score_opus":0.007165782089123916,"score_gpt":0.21943675054347328,"score_spread":0.21227096845434937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313422208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9801017,0.0024371182,0.008550975,0.0003491357,0.00021226576,0.00016024706,0.001885099,0.00016589077,0.0061376193],"genre_scores_gemma":[0.9834116,0.0013344295,0.0063508926,0.00026435123,0.000048723592,0.00017785234,0.001929749,0.000036935053,0.006445358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976486,0.000051217146,0.000029775345,0.00004586537,0.00005170689,0.000056599405],"domain_scores_gemma":[0.99991333,0.000012407024,0.00002035659,0.00001571467,0.000016006636,0.000022215449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016597327,0.0003785493,0.00032549014,0.0001350574,0.00017700571,0.00040333794,0.00014953197,0.00030194194,0.0018664729],"category_scores_gemma":[0.000060193845,0.00011372045,0.0003277808,0.00015408956,0.0001932292,0.00014920937,0.00019638459,0.0007928144,0.0009976313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010801831,0.000040985244,0.000120983525,0.00004911049,0.0000023227162,0.00006830832,0.00001312925,0.000045501158,0.99907863,0.00005692116,0.00004728016,0.00036875924],"study_design_scores_gemma":[0.00001774066,0.0005422593,0.0015548225,0.000009894092,0.000013007424,0.0002222538,0.000043862605,0.0005188043,0.99300766,0.00004098637,0.0040249857,0.0000036720382],"about_ca_topic_score_codex":0.00041553614,"about_ca_topic_score_gemma":0.0004823814,"teacher_disagreement_score":0.0018664729,"about_ca_system_score_codex":0.00021348313,"about_ca_system_score_gemma":0.00017565629,"threshold_uncertainty_score":0.006243944},"labels":[],"label_agreement":null},{"id":"W4313594688","doi":"10.1016/j.anndiagpath.2022.152102","title":"The differential expression of toll like receptors and RIG-1 correlates to the severity of infectious diseases","year":2023,"lang":"en","type":"article","venue":"Annals of Diagnostic Pathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Oncolytics Biotech (Canada)","funders":"","keywords":"Molluscum contagiosum; Immunohistochemistry; Innate immune system; Biology; Receptor; Immunology; Toll-like receptor; TLR2; Immune system; Infectious disease (medical specialty); In utero; Disease; Pathology; Virology; Medicine; Fetus; Pregnancy","score_opus":0.01338652978251748,"score_gpt":0.2636379875357057,"score_spread":0.25025145775318824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313594688","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976318,0.0009045003,0.0004236042,0.000032139495,0.00001298127,0.000008693688,0.00015002712,0.000008728238,0.0008276116],"genre_scores_gemma":[0.9987313,0.0003323638,0.00025064746,0.000034554283,0.000025172074,0.000007694765,0.00023120783,0.000003463305,0.00038365045],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99942917,0.00012437571,0.000079138284,0.00009252238,0.00012614991,0.00014862916],"domain_scores_gemma":[0.9984225,0.00020314874,0.0008044103,0.00009625112,0.00018991879,0.00028363903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004194815,0.0002666733,0.00039794346,0.0011604449,0.0001984423,0.0008040227,0.00018261875,0.0004850855,0.001700418],"category_scores_gemma":[0.0011744658,0.00026568535,0.00027311585,0.0005223956,0.00037993904,0.00034074238,0.0005022321,0.00090797833,0.00057042413],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002323362,0.00020585537,0.3950897,0.00010854718,0.00010539644,0.00047801452,0.00015800103,0.0001425966,0.5928545,0.00021749504,0.00015491429,0.008161728],"study_design_scores_gemma":[0.000009721334,0.00041882397,0.9699718,0.000014059731,0.0000376641,0.0015516067,0.00018850376,0.0003050177,0.026948122,0.00015359778,0.00039043918,0.000010684467],"about_ca_topic_score_codex":0.00014059858,"about_ca_topic_score_gemma":0.00013740495,"teacher_disagreement_score":0.001700418,"about_ca_system_score_codex":0.000136256,"about_ca_system_score_gemma":0.00012244271,"threshold_uncertainty_score":0.0056884885},"labels":[],"label_agreement":null},{"id":"W4313596897","doi":"10.21203/rs.3.rs-2406649/v1","title":"TNF-α and Poly(I:C) induction of A20 and activation of NF-κB signaling are independent of ABCF1 in human airway epithelial cells","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Proinflammatory cytokine; Gene silencing; Transcription factor; Cell biology; Tumor necrosis factor alpha; NF-κB; Innate immune system; Biology; Signal transduction; NFKB1; Interferon regulatory factors; Inflammation; Chemistry; Immune system; Immunology; Biochemistry; Gene","score_opus":0.059360219613980816,"score_gpt":0.3471472794178337,"score_spread":0.2877870598038529,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313596897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.991958,0.0025078363,0.003127457,0.0001360122,0.00005406173,0.000071926464,0.000799462,0.00006432007,0.0012810392],"genre_scores_gemma":[0.99550027,0.00062340096,0.0013700174,0.000058966354,0.000012027087,0.00011342207,0.0009074554,0.000008529377,0.001405859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996617,0.000061960796,0.000049034148,0.00006215219,0.00010238314,0.00006281242],"domain_scores_gemma":[0.99982363,0.00003287322,0.000044208173,0.000041121046,0.000032454253,0.000025736574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027109723,0.0002653277,0.00027677708,0.00022049554,0.00021178054,0.0004378072,0.00013178399,0.000341169,0.0017047069],"category_scores_gemma":[0.00021134886,0.00015593253,0.0003938907,0.00020803837,0.00025268423,0.00021549896,0.0001985786,0.0005137077,0.00069396844],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013005591,0.0000331545,0.00021040897,0.000035996556,0.0000037211482,0.000052968113,0.00002225527,0.000020237467,0.99891055,0.00003716848,0.00002902471,0.0005144378],"study_design_scores_gemma":[0.00005943255,0.00070073124,0.018001623,0.00001546867,0.000022969278,0.00069858803,0.00012173399,0.0014915076,0.97501796,0.0000680898,0.003793618,0.000008267023],"about_ca_topic_score_codex":0.0008169973,"about_ca_topic_score_gemma":0.000633535,"teacher_disagreement_score":0.0017047069,"about_ca_system_score_codex":0.0002997955,"about_ca_system_score_gemma":0.00019529222,"threshold_uncertainty_score":0.0057027936},"labels":[],"label_agreement":null},{"id":"W4313706744","doi":"10.1126/sciimmunol.adf0244","title":"Evading the Toll booth: How “silent” flagellins may bind yet fail to activate TLR5","year":2023,"lang":"en","type":"letter","venue":"Science Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; BC Children's Hospital","funders":"Crohn's and Colitis Canada","keywords":"TLR5; Flagellin; Biology; Toll-like receptor; Gut microbiome; Toll; Immune system; Function (biology); Receptor; Cell biology; Microbiome; Microbiology; Immunology; Innate immune system; Genetics","score_opus":0.027519807193900812,"score_gpt":0.26603186386249056,"score_spread":0.23851205666858974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313706744","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023346017,0.004505699,0.0005446018,0.9458954,0.043478537,0.000015152619,0.000035010708,0.0000785982,0.003112391],"genre_scores_gemma":[0.021363635,0.0042176032,0.00060279615,0.8924224,0.07290005,0.00003600111,0.00002856714,0.000040312603,0.008388681],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861455,0.00053172465,0.00012124419,0.00019095575,0.00035993563,0.00018154675],"domain_scores_gemma":[0.99581665,0.0026893828,0.00020668557,0.00024633136,0.0005729129,0.00046803599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024759716,0.00077105546,0.00092598546,0.00033427766,0.0014587659,0.0021644456,0.0010040556,0.018297354,0.0029278968],"category_scores_gemma":[0.012282065,0.0004196209,0.0008042085,0.00019970284,0.003036084,0.003235262,0.0009235347,0.026208181,0.0040577627],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037907352,0.00010504418,0.0010850269,0.00012259658,0.000042820597,0.007349628,0.00021595125,0.00018087214,0.003675033,0.0109465495,0.94144225,0.034455262],"study_design_scores_gemma":[0.00050940533,0.00041531117,0.0022840516,0.00029318602,0.000060351653,0.014988721,0.0007754422,0.0016777368,0.00447229,0.05249702,0.9219009,0.00012549991],"about_ca_topic_score_codex":0.0013406249,"about_ca_topic_score_gemma":0.0013340197,"teacher_disagreement_score":0.018297354,"about_ca_system_score_codex":0.002254746,"about_ca_system_score_gemma":0.0010313705,"threshold_uncertainty_score":0.01635933},"labels":[],"label_agreement":null},{"id":"W4315780755","doi":"10.1136/jitc-2022-006136","title":"Phase Ib open-label, multicenter study of pixatimod, an activator of TLR9, in combination with nivolumab in subjects with microsatellite-stable metastatic colorectal cancer, metastatic pancreatic ductal adenocarcinoma and other solid tumors","year":2023,"lang":"en","type":"article","venue":"Journal for ImmunoTherapy of Cancer","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ottawa Mental Health Centre","funders":"","keywords":"Medicine; Nivolumab; Internal medicine; Oncology; Pharmacodynamics; Colorectal cancer; Response Evaluation Criteria in Solid Tumors; Cohort; Pancreatic cancer; Gastroenterology; Cancer; Phases of clinical research; Pharmacokinetics; Clinical trial; Immunotherapy","score_opus":0.03232948702170655,"score_gpt":0.3487401860462075,"score_spread":0.3164106990245009,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315780755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99665797,0.0006270999,0.0002844539,0.00015790825,0.00005070313,0.0013078045,0.00031229891,0.000047885147,0.0005537885],"genre_scores_gemma":[0.9946074,0.00039206992,0.0010509279,0.00035916409,0.00008664486,0.0018980646,0.0005590486,0.000015445046,0.0010312117],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9995858,0.00017548059,0.000020033624,0.000090031754,0.000038065893,0.00009060921],"domain_scores_gemma":[0.9992478,0.00009200357,0.0001668434,0.000054640015,0.0000649393,0.000373774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001506236,0.0013048042,0.0014828255,0.000315246,0.0005364236,0.0007619569,0.0006845585,0.0010484777,0.0031346227],"category_scores_gemma":[0.00075070665,0.0006974606,0.0009958545,0.00025091678,0.00079331856,0.0008326724,0.0003145792,0.002751135,0.00075347774],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.7605396,0.1181518,0.011704082,0.00054356025,0.0012578717,0.00016533947,0.00042652793,0.0011946585,0.048590157,0.00015505389,0.0022944093,0.05497701],"study_design_scores_gemma":[0.3627874,0.6176557,0.013890324,0.000022515498,0.0003451657,0.00015814274,0.0000939152,0.0007358839,0.0029364028,0.000107104075,0.001248342,0.000019099763],"about_ca_topic_score_codex":0.00067458255,"about_ca_topic_score_gemma":0.0019706872,"teacher_disagreement_score":0.0031346227,"about_ca_system_score_codex":0.00080128986,"about_ca_system_score_gemma":0.0013492467,"threshold_uncertainty_score":0.010486305},"labels":[],"label_agreement":null},{"id":"W4315782479","doi":"10.3389/fmed.2022.1057252","title":"Inhibition of IL-12 heterodimers impairs TLR9-mediated prevention of early mouse plasmacytoma cell growth","year":2023,"lang":"en","type":"article","venue":"Frontiers in Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Fonds De La Recherche Scientifique - FNRS","keywords":"Immunosurveillance; Innate immune system; TLR9; Biology; Immunology; Cytotoxic T cell; Innate lymphoid cell; TLR3; Interleukin 15; Cancer research; Cell biology; Immune system; Cytokine; Toll-like receptor; Interleukin; DNA methylation; In vitro","score_opus":0.00927609020025488,"score_gpt":0.2279860890460428,"score_spread":0.21870999884578793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315782479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99305105,0.0012318387,0.003105968,0.00011558878,0.000065014654,0.000059279904,0.00055255817,0.00022989634,0.0015888048],"genre_scores_gemma":[0.9930227,0.0005902991,0.0019967551,0.000060522474,0.000017984614,0.00011275696,0.00064583047,0.000032077158,0.0035211865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999637,0.00007908804,0.00004004441,0.000055922872,0.000092693714,0.000095174924],"domain_scores_gemma":[0.999765,0.000043423555,0.00006651605,0.00003519227,0.000016531405,0.00007335084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024346025,0.00063818734,0.00027943385,0.00030499834,0.00010812233,0.0001899846,0.00028800694,0.00045016815,0.0025073362],"category_scores_gemma":[0.00012655275,0.00015054672,0.00028842626,0.0001117788,0.0002023838,0.0001565208,0.00020887771,0.0011001104,0.00083572796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029539596,0.00014244964,0.000082105114,0.000031906657,0.0000043854025,0.00003144622,0.000011566874,0.00005078559,0.9985759,0.00005937924,0.000046161145,0.00066849677],"study_design_scores_gemma":[0.00003263707,0.00078737224,0.0010240595,0.0000053845183,0.000007922184,0.00009581003,0.000008649934,0.0006105953,0.9964902,0.000021522406,0.00091343874,0.0000022956642],"about_ca_topic_score_codex":0.0002890553,"about_ca_topic_score_gemma":0.00029888737,"teacher_disagreement_score":0.0025073362,"about_ca_system_score_codex":0.00020462782,"about_ca_system_score_gemma":0.00016536524,"threshold_uncertainty_score":0.008387864},"labels":[],"label_agreement":null},{"id":"W4319074015","doi":"10.1016/j.archoralbio.2023.105641","title":"The role of granulocyte-macrophage colony-stimulating factor in head and neck cancer","year":2023,"lang":"en","type":"review","venue":"Archives of Oral Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Coordenação de Aperfeiçoamento de Pessoal de Nível Superior","keywords":"Head and neck squamous-cell carcinoma; Medicine; Head and neck cancer; Cancer; Cytokine; Immune system; Granulocyte macrophage colony-stimulating factor; Adjuvant; Cancer research; Oncology; Immunology; Pathology; Internal medicine","score_opus":0.03509604777091328,"score_gpt":0.3433904212628365,"score_spread":0.3082943734919232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319074015","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000030110756,0.9992519,0.000030790026,0.00015440637,0.0002907083,0.000001637575,0.0000058474097,0.0000021123797,0.00023244157],"genre_scores_gemma":[0.0003599732,0.998505,0.00007264693,0.00020022663,0.0005108642,0.000003434022,0.000014652266,6.901924e-7,0.0003325072],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997818,0.00003365411,0.000036663954,0.000036041358,0.00008845916,0.000023383214],"domain_scores_gemma":[0.9996025,0.00017156564,0.00005984869,0.000011068066,0.0001104202,0.000044581175],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087537424,0.0010014824,0.0016697819,0.0020595766,0.00029147035,0.001294495,0.0009713947,0.001389483,0.00281109],"category_scores_gemma":[0.001012046,0.00032015357,0.00046075304,0.0022019006,0.00077909906,0.0013164418,0.00087941514,0.0023906254,0.0021009804],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017454785,0.00007702011,0.00019085906,0.010069357,0.00007510905,0.0002882345,0.00003458146,0.00027510143,0.0013371841,0.001988055,0.050021943,0.93546796],"study_design_scores_gemma":[0.000064805405,0.00014032157,0.0009830578,0.002538154,0.00015652228,0.0012908077,0.000052011957,0.000114498405,0.0004361953,0.0012592634,0.99294466,0.000019707108],"about_ca_topic_score_codex":0.0014989912,"about_ca_topic_score_gemma":0.0024366493,"teacher_disagreement_score":0.00281109,"about_ca_system_score_codex":0.00072566274,"about_ca_system_score_gemma":0.0014685343,"threshold_uncertainty_score":0.009404063},"labels":[],"label_agreement":null},{"id":"W4319433359","doi":"10.4049/jimmunol.206.supp.112.09","title":"Priming of microvascular endothelium by microbiota-derived metabolites regulates neutrophil trafficking to the liver during sepsis","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Granulopoiesis; Intravital microscopy; Biology; Sepsis; Immunology; Endothelium; Immune system; Neutrophil extracellular traps; Inflammation; Priming (agriculture); Microbiology; Cell biology; Stem cell; In vivo; Endocrinology; Haematopoiesis","score_opus":0.00677011410553584,"score_gpt":0.19936941682759923,"score_spread":0.19259930272206338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319433359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99402666,0.0024019806,0.0022120043,0.00018215227,0.000045798683,0.000013542585,0.00024685092,0.00005923185,0.00081186695],"genre_scores_gemma":[0.99718034,0.0006563131,0.0010926592,0.000081486105,0.000012977179,0.000021697602,0.0001230921,0.00001016533,0.00082130457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998673,0.000034090608,0.00000940774,0.000023743785,0.000024804493,0.000040601713],"domain_scores_gemma":[0.999871,0.00001207487,0.000039380535,0.000009475,0.000019427258,0.000048710062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013232495,0.00015422155,0.00024004662,0.00013668634,0.00012305558,0.0003480598,0.000099996374,0.00029627245,0.0010115375],"category_scores_gemma":[0.00013657534,0.00009871931,0.00014748266,0.00008689317,0.00019642728,0.00023733662,0.00026025044,0.00059123535,0.00024512256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042850658,0.000022187676,0.0005090811,0.000044098622,0.0000028200636,0.00007383544,0.00001556488,0.000039867984,0.9974268,0.00007977883,0.00007129993,0.0012861292],"study_design_scores_gemma":[0.00006284502,0.00121641,0.08066501,0.000047534006,0.00003795083,0.0008223395,0.0003042836,0.0030119529,0.90951425,0.00034005317,0.003959574,0.00001773288],"about_ca_topic_score_codex":0.00021466063,"about_ca_topic_score_gemma":0.0002754713,"teacher_disagreement_score":0.0010115375,"about_ca_system_score_codex":0.00026066342,"about_ca_system_score_gemma":0.00017774836,"threshold_uncertainty_score":0.003383994},"labels":[],"label_agreement":null},{"id":"W4319596695","doi":"10.3390/biomedicines11020483","title":"Oncostatin M Receptor Type II Knockout Mitigates Inflammation and Improves Survival from Sepsis in Mice","year":2023,"lang":"en","type":"article","venue":"Biomedicines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University Hospital Foundation; Royal Alexandra Hospital Foundation; Surgical Infection Society; American College of Surgeons","keywords":"Oncostatin M; Sepsis; Cytokine; Tumor necrosis factor alpha; Gene knockout; Inflammation; Receptor; Knockout mouse; Peritonitis; Medicine; Peritoneum; Intraperitoneal injection; Internal medicine; Endocrinology; Immunology; Interleukin 6; Andrology; Biology; Pathology","score_opus":0.013036175827539364,"score_gpt":0.2548316165923585,"score_spread":0.24179544076481913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4319596695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99285877,0.001387361,0.0026401787,0.00038756864,0.00016126124,0.00004694272,0.00091093534,0.00030697352,0.0013001853],"genre_scores_gemma":[0.9845526,0.002604742,0.0032868828,0.00042690153,0.00006699507,0.0001529405,0.0016187348,0.0000929652,0.007197272],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981743,0.000026320895,0.000024663286,0.000028698945,0.000040316907,0.00006267039],"domain_scores_gemma":[0.99973196,0.000011262191,0.000119392105,0.000020693175,0.000018464207,0.000098173216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022061772,0.0005521707,0.00056702865,0.00038369797,0.00011287377,0.00036996434,0.0002905883,0.00045776038,0.0015202167],"category_scores_gemma":[0.00014422479,0.00023746607,0.00041028435,0.00016085365,0.00032224538,0.0003380358,0.00022716266,0.0010571736,0.0005628657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016179809,0.00022515535,0.00050159334,0.000098263234,0.000024608344,0.00010764218,0.000015580377,0.000096400436,0.9941539,0.00009374385,0.00023269012,0.0028324653],"study_design_scores_gemma":[0.00053535093,0.010390601,0.021032782,0.000080083795,0.00019843399,0.0012851995,0.0001867533,0.0019641782,0.9553476,0.00021578501,0.008731858,0.000031389332],"about_ca_topic_score_codex":0.00027144174,"about_ca_topic_score_gemma":0.00041770464,"teacher_disagreement_score":0.0015202167,"about_ca_system_score_codex":0.0001739759,"about_ca_system_score_gemma":0.0002595831,"threshold_uncertainty_score":0.005085647},"labels":[],"label_agreement":null},{"id":"W4320061499","doi":"10.4049/jimmunol.206.supp.98.12","title":"Receptor interacting protein kinase 1 (RIPK1) pathways regulate innate B cell developmental checkpoints and delay effector function","year":2021,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Mary's University","funders":"","keywords":"RIPK1; Biology; Cell biology; Innate immune system; B cell; Germinal center; Immunology; Programmed cell death; Immune system; Apoptosis; Antibody; Necroptosis; Biochemistry","score_opus":0.008629992792371095,"score_gpt":0.1997627599667828,"score_spread":0.19113276717441172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320061499","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9839064,0.0054939827,0.0055704005,0.00023444077,0.00005575864,0.000047306174,0.001262048,0.0005443005,0.0028854602],"genre_scores_gemma":[0.9924522,0.001194345,0.0027980797,0.00007265609,0.000011583685,0.00004907131,0.0006311761,0.000043529533,0.002747398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981743,0.000028980417,0.000015996875,0.000050028324,0.00003294043,0.000054755274],"domain_scores_gemma":[0.99984014,0.000010299105,0.00007122769,0.000014980851,0.000016110658,0.000047231704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016345877,0.00060459843,0.00020519306,0.0003155602,0.00022035072,0.00037479115,0.0002990319,0.000330199,0.0025622132],"category_scores_gemma":[0.00012968325,0.00017985179,0.00029117093,0.00010608518,0.00025040202,0.00033375953,0.00039431016,0.0009227067,0.0012262664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011820913,0.000013779532,0.00026494527,0.00004316994,0.0000054206625,0.000064904845,0.000007934093,0.00006575572,0.99833953,0.00013846524,0.00007434305,0.00086346886],"study_design_scores_gemma":[0.000027624059,0.00017820038,0.007852337,0.00001593991,0.000021935697,0.0007096022,0.000036397123,0.00095744285,0.98618686,0.00020746813,0.003800064,0.000006089238],"about_ca_topic_score_codex":0.00017784939,"about_ca_topic_score_gemma":0.00026141902,"teacher_disagreement_score":0.0025622132,"about_ca_system_score_codex":0.00043973938,"about_ca_system_score_gemma":0.00017608088,"threshold_uncertainty_score":0.008571506},"labels":[],"label_agreement":null},{"id":"W4321459319","doi":"10.3389/fimmu.2022.1041552","title":"ICAMs are dispensable for influenza clearance and anti-viral humoral and cellular immunity","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health","keywords":"Immunology; Biology; Humoral immunity; CD8; Virus; Cytotoxic T cell; Immunity; Antibody; Cellular immunity; Virology; Immune system","score_opus":0.012744419350771101,"score_gpt":0.23679694587086578,"score_spread":0.22405252652009466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321459319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970086,0.0009776872,0.00080052763,0.00004664389,0.000013212655,0.0000068099375,0.00014321804,0.000047506197,0.0009558743],"genre_scores_gemma":[0.9977864,0.0003395692,0.0005108282,0.00003096302,0.000012416483,0.000013131978,0.000261087,0.000014791712,0.0010307969],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981767,0.000023184759,0.0000141720175,0.00004018694,0.00004126718,0.00006353784],"domain_scores_gemma":[0.99972934,0.00002812488,0.000105650666,0.00003285398,0.00001643256,0.00008756935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000086013126,0.00037713192,0.00023709574,0.00022258204,0.000119120545,0.00044336615,0.00021683538,0.00031617755,0.0014097429],"category_scores_gemma":[0.000136364,0.00019948455,0.00017172196,0.00010169372,0.00022980363,0.0003270479,0.00030696508,0.0006680679,0.00041758936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112250586,0.000014503112,0.0004925207,0.000017646726,0.0000030351682,0.00009902935,0.0000067003825,0.000033098124,0.998271,0.00012606574,0.000021115795,0.000803116],"study_design_scores_gemma":[0.00006408194,0.00069290126,0.052497424,0.000030511883,0.00006204688,0.0028406268,0.00013374689,0.002354329,0.93514395,0.0003633802,0.005800761,0.00001621293],"about_ca_topic_score_codex":0.0001742711,"about_ca_topic_score_gemma":0.0002274904,"teacher_disagreement_score":0.0014097429,"about_ca_system_score_codex":0.00018851145,"about_ca_system_score_gemma":0.00014588414,"threshold_uncertainty_score":0.0047160387},"labels":[],"label_agreement":null},{"id":"W4321748510","doi":"10.1097/md.0000000000033040","title":"Association of TLR4 gene 2026A/G (rs1927914), 896A/G (rs4986790), and 1196C/T (rs4986791) polymorphisms and cancer susceptibility: Meta-analysis and trial sequential analysis","year":2023,"lang":"en","type":"review","venue":"Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Natural Science Foundation of China","keywords":"Medicine; Meta-analysis; Odds ratio; Internal medicine; Colorectal cancer; Oncology; Publication bias; Cancer; Inclusion and exclusion criteria; Confidence interval; Pathology","score_opus":0.10687588410703934,"score_gpt":0.36868232558791114,"score_spread":0.2618064414808718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321748510","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06846302,0.91968167,0.0062541286,0.0010063025,0.000726488,0.0009016658,0.0018715403,0.00013201675,0.0009631412],"genre_scores_gemma":[0.7805936,0.20161153,0.0096687805,0.0011803453,0.00085978146,0.0025033802,0.0023486342,0.00009080665,0.0011432278],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9910569,0.0040488592,0.0022114941,0.0013799284,0.00096656475,0.00033623588],"domain_scores_gemma":[0.9897169,0.007403289,0.001483358,0.000559625,0.0006401375,0.00019660898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015245227,0.0020882774,0.0116757685,0.004166454,0.00067976647,0.002725081,0.0017951953,0.0015239125,0.0026882936],"category_scores_gemma":[0.018610368,0.0009455096,0.036351625,0.0058830236,0.00055557524,0.0013708201,0.0009441926,0.0015471014,0.0002316577],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00818743,0.0000784937,0.041657362,0.06238006,0.8717545,0.00025879353,0.00007509633,0.001847583,0.0007375261,0.00023290275,0.0007714971,0.01201864],"study_design_scores_gemma":[0.0010478118,0.00031708265,0.009409766,0.002372826,0.9839266,0.00012665024,0.000026239499,0.0012404573,0.00023315194,0.0003999623,0.00087903097,0.000020418824],"about_ca_topic_score_codex":0.0027543842,"about_ca_topic_score_gemma":0.004530014,"teacher_disagreement_score":0.015245227,"about_ca_system_score_codex":0.0014120894,"about_ca_system_score_gemma":0.0023386322,"threshold_uncertainty_score":0.080625415},"labels":[],"label_agreement":null},{"id":"W4323052161","doi":"10.1101/2023.03.01.530640","title":"Tafazzin knockdown in murine mesenchymal stem cells enhances the tafazzin knockdown mediated elevation in interleukin-10 secretion from murine B lymphocytes","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Gene knockdown; Mesenchymal stem cell; Biology; Molecular biology; Haematopoiesis; Cytokine; Cell biology; Stem cell; Cell culture; Immunology","score_opus":0.012824824724650198,"score_gpt":0.21071715486483908,"score_spread":0.1978923301401889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323052161","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919593,0.0015761807,0.0030452646,0.00020741583,0.00011367912,0.00007798348,0.0011215126,0.0001814717,0.0017172688],"genre_scores_gemma":[0.989673,0.0008904249,0.0031037102,0.00012951442,0.000028951925,0.00014080595,0.0014620218,0.000033659657,0.004537965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996587,0.000052350868,0.00006237926,0.00006273399,0.00008934394,0.000074474796],"domain_scores_gemma":[0.9998184,0.000028630577,0.000051533218,0.000018867704,0.000019221621,0.00006344743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018343984,0.00046257072,0.00031243646,0.00035536138,0.00015786363,0.00036383572,0.0002186457,0.0003979755,0.0017503643],"category_scores_gemma":[0.000084879815,0.00020377077,0.00032409767,0.00021995652,0.00027540277,0.0001897091,0.00025532243,0.0011205386,0.0006079113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009351589,0.00003177718,0.000074251264,0.00003344884,0.0000041670946,0.0000205849,0.000014306594,0.000027300874,0.9992021,0.000031387834,0.000042268177,0.00042498062],"study_design_scores_gemma":[0.000026512738,0.00034178767,0.0027934604,0.00000807715,0.000020902597,0.00007909356,0.000042903208,0.00064977247,0.99372697,0.000019927827,0.002287109,0.0000035564296],"about_ca_topic_score_codex":0.00050945993,"about_ca_topic_score_gemma":0.000879318,"teacher_disagreement_score":0.0017503643,"about_ca_system_score_codex":0.0002206457,"about_ca_system_score_gemma":0.00015279121,"threshold_uncertainty_score":0.0058555007},"labels":[],"label_agreement":null},{"id":"W4323348324","doi":"10.1084/jem.20220170","title":"Humans with inherited MyD88 and IRAK-4 deficiencies are predisposed to hypoxemic COVID-19 pneumonia","year":2023,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Fundación Canaria Instituto de Investigación Sanitaria de Canarias; Agencia Estatal de Investigación; Instituto de Salud Carlos III; National Center for Advancing Translational Sciences; HORIZON EUROPE Framework Programme; National Center for Research Resources; Universität Zürich; Generalitat de Catalunya; Bundesministerium für Bildung und Forschung; Ministerio de Ciencia e Innovación; Fundación Mapfre; Else Kröner-Fresenius-Stiftung; European Commission; National Institutes of Health; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Centres de Recerca de Catalunya; CSL Behring; National Institute of Allergy and Infectious Diseases; Howard Hughes Medical Institute; National Science Foundation","keywords":"Pneumonia; Penetrance; Medicine; Population; Immunology; Atypical pneumonia; Internal medicine; Biology; Gene; Genetics; Phenotype","score_opus":0.030526405942801867,"score_gpt":0.2989012670301731,"score_spread":0.26837486108737124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323348324","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9994004,0.00013891674,0.00015881473,0.00001957278,0.000003239499,0.000004146394,0.000038577593,0.0000075518687,0.00022886842],"genre_scores_gemma":[0.99943525,0.00011275725,0.00016579,0.00002521409,0.000009922093,0.0000039488973,0.00006736781,0.0000032991313,0.00017643828],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981815,0.000050803596,0.000018637731,0.000046240526,0.000022939626,0.000043405245],"domain_scores_gemma":[0.9997495,0.000043817952,0.00011902983,0.000022051632,0.00001713249,0.000048475275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001349054,0.0007417462,0.00045112224,0.0005939719,0.00053470995,0.00025874222,0.00018146324,0.0003863281,0.002450511],"category_scores_gemma":[0.0006290669,0.0002984358,0.00021681428,0.00030378267,0.00044811843,0.00023793455,0.00043130163,0.00031170575,0.0002654233],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016980063,0.00019097907,0.8858227,0.0000872154,0.00021481326,0.028554894,0.0010181777,0.0002618293,0.07022752,0.00028546283,0.00057558983,0.011062803],"study_design_scores_gemma":[0.000049606857,0.00087282475,0.9232532,0.000026805132,0.000118115146,0.06976196,0.0006765397,0.00032587204,0.0033890437,0.00025200876,0.0012506768,0.000023302653],"about_ca_topic_score_codex":0.00056794245,"about_ca_topic_score_gemma":0.00047547117,"teacher_disagreement_score":0.002450511,"about_ca_system_score_codex":0.000106781816,"about_ca_system_score_gemma":0.000082083854,"threshold_uncertainty_score":0.008197844},"labels":[],"label_agreement":null},{"id":"W4323350197","doi":"10.1155/2023/2899271","title":"TIRAP, TRAM, and Toll-Like Receptors: The Untold Story","year":2023,"lang":"en","type":"review","venue":"Mediators of Inflammation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"TLR3; Proinflammatory cytokine; Receptor; Innate immune system; TRIF; Signal transducing adaptor protein; Pattern recognition receptor; Signal transduction; Cell biology; Toll-like receptor; Biology; Toll; Myeloid cells; Immunology; Inflammation; Genetics","score_opus":0.02399735310691562,"score_gpt":0.28008037245552303,"score_spread":0.2560830193486074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323350197","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006144659,0.9973749,0.000098665405,0.00079386827,0.00091044395,0.0000013857863,0.000010508263,0.000006696852,0.0007421263],"genre_scores_gemma":[0.0005252424,0.9965964,0.00014228417,0.00062150345,0.0009840832,0.0000033912634,0.000024333574,0.0000028734873,0.0010997454],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997956,0.000034350865,0.000023041019,0.00004012042,0.000080883015,0.000025969854],"domain_scores_gemma":[0.99958307,0.00017166378,0.0000438316,0.000018388395,0.00011598748,0.0000670593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007355595,0.0008862067,0.0011583671,0.001733268,0.0003418615,0.0017546202,0.0008900028,0.0017191923,0.0041349516],"category_scores_gemma":[0.000993326,0.00025724742,0.0004030412,0.002032863,0.00077387586,0.0035343796,0.0009085537,0.003241924,0.0037784278],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001516428,0.00006481333,0.00017232467,0.01170794,0.00006573987,0.00041962983,0.00013958232,0.00025702416,0.003585649,0.012175219,0.09289971,0.8783607],"study_design_scores_gemma":[0.0000058898227,0.000046453173,0.00022334896,0.001244213,0.000023237742,0.00079978426,0.00005086803,0.000028847477,0.00028052813,0.0023703312,0.994915,0.000011476517],"about_ca_topic_score_codex":0.0006825461,"about_ca_topic_score_gemma":0.00083922,"teacher_disagreement_score":0.0041349516,"about_ca_system_score_codex":0.0006612363,"about_ca_system_score_gemma":0.0011828013,"threshold_uncertainty_score":0.013832808},"labels":[],"label_agreement":null},{"id":"W4324334798","doi":"10.1016/j.vetimm.2023.110579","title":"Immunotolerance of dairy heifers in response to repeated exposure to bacterial lipopolysaccharide endotoxin","year":2023,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Lipopolysaccharide; Immune system; Chemokine; Immunology; Biology; Innate immune system; Cytokine; Sepsis; Saline; Inflammation; Endocrinology; Internal medicine; Medicine","score_opus":0.014818686626052636,"score_gpt":0.2556866176745352,"score_spread":0.2408679310484826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4324334798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997749,0.000036161473,0.00003576193,0.0000117323325,0.0000044514313,0.000004798204,0.000018306213,0.0000019451982,0.000112062386],"genre_scores_gemma":[0.9986953,0.000047840836,0.000043625096,0.000042091186,0.0000071620448,0.000014272444,0.00007513009,0.0000037455013,0.0010708546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972385,0.000042938078,0.000009409621,0.000059728685,0.00004939127,0.000114699804],"domain_scores_gemma":[0.9994049,0.00012120785,0.00010778372,0.00004564464,0.00006902093,0.00025142555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025744224,0.00031674598,0.0005579197,0.00041268207,0.0004877497,0.00055253814,0.00016580259,0.0005273857,0.0010301635],"category_scores_gemma":[0.0006002145,0.00029413967,0.00023290057,0.00019179085,0.0007075004,0.00023423988,0.00025146117,0.0010003004,0.00020243475],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01225453,0.0016537919,0.043002024,0.00006000589,0.000061195475,0.0007257117,0.0011618992,0.00022534863,0.9366396,0.00010526963,0.00012614708,0.003984552],"study_design_scores_gemma":[0.0001563323,0.012640602,0.91773146,0.000020666417,0.00008468545,0.00068070204,0.001778452,0.00090336235,0.065046385,0.00016601065,0.00074913335,0.000042252428],"about_ca_topic_score_codex":0.0039836224,"about_ca_topic_score_gemma":0.0065508513,"teacher_disagreement_score":0.0039836224,"about_ca_system_score_codex":0.0005742783,"about_ca_system_score_gemma":0.000584101,"threshold_uncertainty_score":0.007920861},"labels":[],"label_agreement":null},{"id":"W4327519711","doi":"10.2139/ssrn.4379817","title":"Generation and Structure-Activity Relationships of Novel Imidazo-Thienopyridine Based TLR7 Agonists: Application as Payloads for Immunostimulatory Antibody Drug-Conjugates","year":2023,"lang":"en","type":"article","venue":"SSRN Electronic Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Zymeworks (Canada)","funders":"","keywords":"TLR7; Conjugate; Drug; Thienopyridine; Pharmacology; Chemistry; Antibody; Antibody-drug conjugate; Receptor; Medicine; Monoclonal antibody; Immunology; Biochemistry; Toll-like receptor","score_opus":0.018606846018105003,"score_gpt":0.2795671108920985,"score_spread":0.2609602648739935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4327519711","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9876324,0.0035330881,0.0049829585,0.00011189428,0.000026701378,0.00012147666,0.00040061906,0.00006338025,0.0031274853],"genre_scores_gemma":[0.99210936,0.0021260562,0.0030560761,0.00003982789,0.000007584711,0.00004213445,0.0003206675,0.000007766858,0.00229064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995196,0.000009653522,0.0000046732966,0.000009312734,0.000011604793,0.000012834976],"domain_scores_gemma":[0.99993956,0.000010100301,0.000023732504,0.0000048919387,0.000009827403,0.000011894877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001488345,0.00022463131,0.00015111093,0.000096102776,0.000078288955,0.00013197325,0.00023936189,0.00022007085,0.001448014],"category_scores_gemma":[0.00014692711,0.00010683193,0.0001273975,0.000108391134,0.000087507506,0.00015072672,0.0001282144,0.00032493856,0.00043255373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019824467,0.000072954695,0.00008504317,0.000103942584,0.000007681101,0.000061860126,0.000020970314,0.00052974914,0.99487394,0.00015610657,0.000077694094,0.0038116993],"study_design_scores_gemma":[0.000039119626,0.0015763511,0.0008377049,0.000007129059,0.000022997747,0.00016111851,0.000014351027,0.001073364,0.99376774,0.000030574207,0.002461289,0.000008243655],"about_ca_topic_score_codex":0.00020323077,"about_ca_topic_score_gemma":0.00068483024,"teacher_disagreement_score":0.001448014,"about_ca_system_score_codex":0.00019007575,"about_ca_system_score_gemma":0.00012481607,"threshold_uncertainty_score":0.0048440695},"labels":[],"label_agreement":null},{"id":"W4362468736","doi":"10.3389/fimmu.2023.1155200","title":"C-type lectin receptor agonists elicit functional IL21-expressing Tfh cells and induce primary B cell responses in neonates","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Université de Genève; Karolinska Institutet; European Commission; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Germinal center; Adjuvant; Biology; Immunology; B cell; Receptor; CD40; Antibody; Cytotoxic T cell; Genetics","score_opus":0.011239685557262721,"score_gpt":0.2166355225773009,"score_spread":0.20539583702003816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362468736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926576,0.002511282,0.0023079505,0.00009491318,0.00003968337,0.00007402653,0.0006613675,0.000086156266,0.0015669204],"genre_scores_gemma":[0.9925775,0.0013461806,0.0024344265,0.00012833223,0.00003632025,0.0001188279,0.00055704167,0.000023367069,0.0027780433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999803,0.00003773977,0.00002093611,0.000040364186,0.000040335974,0.00005768794],"domain_scores_gemma":[0.9998354,0.000029306228,0.000049738268,0.000012968952,0.000021294945,0.000051265673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023487389,0.00043652058,0.00026871718,0.0002784581,0.00009901714,0.00022975916,0.00016555851,0.00034960706,0.00206235],"category_scores_gemma":[0.00018214798,0.00012312365,0.00022502744,0.00009857896,0.00019688498,0.00019728375,0.00020387552,0.00064598065,0.0006521704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014409843,0.00003338048,0.00048641046,0.000055556964,0.000003060635,0.00007145864,0.000019473671,0.000023249344,0.99783355,0.00003159656,0.000041210114,0.0012569675],"study_design_scores_gemma":[0.000027738442,0.0010666576,0.01412798,0.000025901321,0.000018974912,0.000541104,0.00009762033,0.00031970642,0.9813317,0.00006364391,0.002371406,0.000007621295],"about_ca_topic_score_codex":0.00026549672,"about_ca_topic_score_gemma":0.0004150106,"teacher_disagreement_score":0.00206235,"about_ca_system_score_codex":0.00024521557,"about_ca_system_score_gemma":0.00020551615,"threshold_uncertainty_score":0.0068992376},"labels":[],"label_agreement":null},{"id":"W4362521580","doi":"10.1093/femspd/ftad005","title":"Comparative study of GBP recruitment on two cytosol-dwelling pathogens, <i>Francisella novicida</i> and <i>Shigella flexneri</i> highlights differences in GBP repertoire and in GBP1 motif requirements","year":2023,"lang":"en","type":"article","venue":"Pathogens and Disease","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Fondation pour la Recherche Médicale; Agence Nationale de la Recherche; Stanford University","keywords":"Francisella; Shigella flexneri; Biology; Shigella; Francisella tularensis; Microbiology; Genetics; Bacteria; Salmonella; Virulence; Escherichia coli; Gene","score_opus":0.06570622270103298,"score_gpt":0.302130722094756,"score_spread":0.236424499393723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362521580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998836,0.00030399635,0.0003692964,0.000015285685,0.0000026653431,0.0000039300785,0.00010560932,0.000008145713,0.000355221],"genre_scores_gemma":[0.9976947,0.0003300917,0.00074682897,0.00003251512,0.0000033594308,0.000015970129,0.00041288798,0.000007904339,0.0007557574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992025,0.000010769886,0.0000043749915,0.00001667446,0.000016427455,0.00003149612],"domain_scores_gemma":[0.99994314,0.000012491023,0.00001114706,0.0000039221172,0.000013274957,0.000016024189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006583513,0.00023443693,0.00018479496,0.0001540349,0.00011227177,0.00011697321,0.00009460225,0.00020181669,0.00064196804],"category_scores_gemma":[0.000113119546,0.000092185146,0.00017926318,0.00009598812,0.000107890286,0.00015722174,0.00019590133,0.00016415854,0.00018529923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009682383,0.000004212667,0.0007252621,0.000026237232,0.0000027816457,0.000026594982,0.00001766917,0.00002607952,0.9983689,0.000012461216,0.000013539648,0.00067938876],"study_design_scores_gemma":[0.000007959836,0.00037508778,0.10439985,0.000013696346,0.000024722527,0.00060593185,0.00020211189,0.0015022045,0.8911522,0.000048398724,0.001656969,0.00001087997],"about_ca_topic_score_codex":0.000820776,"about_ca_topic_score_gemma":0.0006602845,"teacher_disagreement_score":0.000820776,"about_ca_system_score_codex":0.00011021277,"about_ca_system_score_gemma":0.00007826604,"threshold_uncertainty_score":0.002147615},"labels":[],"label_agreement":null},{"id":"W4363676592","doi":"10.3390/vaccines11040818","title":"Toll-Like Receptors and the Response to Radiotherapy in Solid Tumors: Challenges and Opportunities","year":2023,"lang":"en","type":"review","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Immune system; Radiation therapy; Toll-like receptor; Cancer research; Receptor; Immunotherapy; Inflammation; Cancer; Biology; Pathogen-associated molecular pattern; Immunology; Innate immune system; Signal transduction; Medicine; Pattern recognition receptor; Cell biology; Internal medicine; Genetics","score_opus":0.079510308348453,"score_gpt":0.3224379914748294,"score_spread":0.24292768312637636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4363676592","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000073290685,0.9988212,0.0000755949,0.00028447167,0.00019688813,0.0000019431202,0.000006501749,0.0000039325323,0.0005362061],"genre_scores_gemma":[0.00042934628,0.99878246,0.00007615324,0.00015413277,0.00019860278,0.0000030421406,0.000012870693,7.401488e-7,0.00034262132],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985754,0.000034207835,0.00001936189,0.000021620957,0.000052049465,0.000015268577],"domain_scores_gemma":[0.9997886,0.00010261883,0.000025421536,0.0000060603197,0.000056756904,0.000020625976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045525993,0.0006133742,0.00091833394,0.001313094,0.0002361347,0.0008131593,0.00056443363,0.0010452231,0.0026760423],"category_scores_gemma":[0.0005522541,0.0001684737,0.00037740974,0.0013346678,0.00040306788,0.0011779116,0.0005119482,0.001692546,0.0013990432],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008352409,0.00007095558,0.00021586176,0.018018918,0.00006404051,0.00020004276,0.000089155736,0.00040203138,0.0025790331,0.00573949,0.03470666,0.9378303],"study_design_scores_gemma":[0.000012805875,0.00013700759,0.0010190414,0.004205888,0.00007673368,0.0013939767,0.00010145542,0.00009701027,0.00044147356,0.0034574117,0.9890393,0.000017885415],"about_ca_topic_score_codex":0.00062741706,"about_ca_topic_score_gemma":0.001005106,"teacher_disagreement_score":0.0026760423,"about_ca_system_score_codex":0.0004905096,"about_ca_system_score_gemma":0.0010383991,"threshold_uncertainty_score":0.00895226},"labels":[],"label_agreement":null},{"id":"W4365515424","doi":"10.3389/fimmu.2023.1145826","title":"Establishing the role of the FES tyrosine kinase in the pathogenesis, pathophysiology, and severity of sepsis and its outcomes","year":2023,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston General Hospital; Queen's University","funders":"Physicians' Services Incorporated Foundation","keywords":"Sepsis; Medicine; Immune system; Septic shock; Immunology; Inflammation; Cytokine; Immune dysregulation; Pathophysiology; Internal medicine","score_opus":0.006276800829307528,"score_gpt":0.2123879736680616,"score_spread":0.20611117283875408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4365515424","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73772335,0.06461589,0.08872531,0.025579361,0.0026357241,0.009219179,0.019161655,0.00052059314,0.051818945],"genre_scores_gemma":[0.8986815,0.027778152,0.05193432,0.0020348674,0.0005720988,0.0035066162,0.0042287703,0.000073673524,0.011189931],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985512,0.0007107243,0.00012475377,0.00012078435,0.00030008645,0.00019247683],"domain_scores_gemma":[0.9983725,0.0003735116,0.0003617115,0.00025499924,0.00036791974,0.00026940423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007137695,0.0003557254,0.0004099065,0.00095254474,0.0004471417,0.0015324557,0.00084402773,0.00080436835,0.008710264],"category_scores_gemma":[0.003589693,0.00021727741,0.0003738024,0.0005659288,0.00088070444,0.0007866413,0.0012026477,0.0009033745,0.0012399306],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009751571,0.00080333254,0.062681176,0.006497125,0.00017199019,0.00197764,0.0025263461,0.0015395584,0.5705107,0.029379794,0.02365012,0.29051057],"study_design_scores_gemma":[0.0013005971,0.008034918,0.47311836,0.00730077,0.0005138928,0.0056570168,0.0071036136,0.0050582723,0.17001152,0.018054577,0.30360964,0.00023686425],"about_ca_topic_score_codex":0.0025297753,"about_ca_topic_score_gemma":0.0021640686,"teacher_disagreement_score":0.008710264,"about_ca_system_score_codex":0.0009769659,"about_ca_system_score_gemma":0.002604778,"threshold_uncertainty_score":0.037748218},"labels":[],"label_agreement":null},{"id":"W4367059102","doi":"10.1126/sciadv.adf6205","title":"Coupling of protein condensates to ordered lipid domains determines functional membrane organization","year":2023,"lang":"en","type":"article","venue":"Science Advances","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Hospital for Sick Children; National Institutes of Health; Volkswagen Foundation","keywords":"Lipid raft; Signal transducing adaptor protein; Lipid microdomain; Cytoplasm; Transmembrane protein; Biophysics; Cell biology; Membrane; Lipid bilayer; Chemistry; Signal transduction; Biology; Receptor; Biochemistry","score_opus":0.011314773820326291,"score_gpt":0.2523496545632007,"score_spread":0.2410348807428744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4367059102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960377,0.00031575494,0.0028831034,0.000046777994,0.0000059518247,0.000007872766,0.00005076638,0.000023137318,0.0006288958],"genre_scores_gemma":[0.9990889,0.00012403588,0.00043452438,0.00001191822,0.0000026396965,0.000003957808,0.000051691648,0.0000090170015,0.0002734558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998621,0.000021904392,0.0000096969425,0.00003300498,0.000040466784,0.00003278419],"domain_scores_gemma":[0.9998319,0.000034626955,0.000057609446,0.000016780885,0.000016545098,0.000042562562],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014427981,0.0002040953,0.00016413146,0.00017646073,0.0001944468,0.0003935306,0.00010373059,0.00017012982,0.0008821095],"category_scores_gemma":[0.00025617346,0.00017646998,0.00013553862,0.000118067604,0.00044642258,0.0003235731,0.00032510093,0.00035225233,0.00022000792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018161567,0.0000028565087,0.00021786266,0.0000060998796,0.0000015338774,0.000010283289,0.0000058686924,0.000037685764,0.99940777,0.00011814708,0.0000030352155,0.00017074619],"study_design_scores_gemma":[0.0000044155217,0.00003615178,0.004211622,0.00000132743,0.000004355166,0.000055245662,0.000024598368,0.0009242529,0.99427235,0.000116862306,0.00034628893,0.0000025391805],"about_ca_topic_score_codex":0.0003505624,"about_ca_topic_score_gemma":0.00069872994,"teacher_disagreement_score":0.0008821095,"about_ca_system_score_codex":0.00038258414,"about_ca_system_score_gemma":0.00020753236,"threshold_uncertainty_score":0.0029509664},"labels":[],"label_agreement":null},{"id":"W4377141782","doi":"10.1016/j.bmcl.2023.129348","title":"Generation and structure-activity relationships of novel imidazo-thienopyridine based TLR7 agonists: application as payloads for immunostimulatory antibody drug-conjugates","year":2023,"lang":"en","type":"article","venue":"Bioorganic & Medicinal Chemistry Letters","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Zymeworks (Canada)","funders":"","keywords":"Chemistry; TLR7; In vivo; Pharmacology; In vitro; Linker; Biochemistry; Toll-like receptor; Receptor; Innate immune system; Biology","score_opus":0.02386460946453783,"score_gpt":0.2714027146778136,"score_spread":0.24753810521327574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377141782","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9900123,0.0028400824,0.0041694823,0.00010718997,0.000022993974,0.00010159436,0.00037794505,0.000062288455,0.0023060811],"genre_scores_gemma":[0.99354583,0.0016892853,0.0025506085,0.0000359115,0.000007146266,0.00003951659,0.00030333016,0.000007392461,0.0018210653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999498,0.00000954848,0.0000046400064,0.0000089166615,0.000011144647,0.000015937016],"domain_scores_gemma":[0.99993217,0.0000118706985,0.000024835123,0.0000054452557,0.000011615481,0.000014106593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014988627,0.00021838235,0.00014718104,0.00009454174,0.00008024112,0.00013582339,0.0002420576,0.00021816071,0.0013937849],"category_scores_gemma":[0.00015678952,0.00011125603,0.00012149299,0.00010935832,0.00009180101,0.00015798095,0.00013553229,0.00031521503,0.0003871944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025655687,0.00007942511,0.000101115744,0.000091663926,0.0000068980958,0.00006203776,0.000021436877,0.0005548847,0.99498945,0.00014419082,0.000081645536,0.003610606],"study_design_scores_gemma":[0.0000419009,0.0014509027,0.000827143,0.000005438613,0.000020116391,0.00013539688,0.00001333713,0.0010388528,0.9944089,0.000025193905,0.0020249481,0.000007814487],"about_ca_topic_score_codex":0.00024154142,"about_ca_topic_score_gemma":0.0006783844,"teacher_disagreement_score":0.0013937849,"about_ca_system_score_codex":0.00019901435,"about_ca_system_score_gemma":0.00012892977,"threshold_uncertainty_score":0.0046626925},"labels":[],"label_agreement":null},{"id":"W4378594166","doi":"10.1016/j.athplu.2023.05.002","title":"Fibronectin extra domain a limits liver dysfunction and protects mice during acute inflammation","year":2023,"lang":"en","type":"article","venue":"Atherosclerosis Plus","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Fondazione Telethon; University of Calgary","keywords":"Sepsis; Inflammation; Fibronectin; Immunology; Spleen; Alternative splicing; Biology; Gene isoform; Cell; Gene; Biochemistry","score_opus":0.016328277798518278,"score_gpt":0.2156029983638015,"score_spread":0.19927472056528323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378594166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99237216,0.0010946601,0.0027214393,0.00031590794,0.000106326144,0.00007618233,0.00087544246,0.00030004728,0.0021377676],"genre_scores_gemma":[0.98443764,0.00096760836,0.0030225425,0.00029388024,0.00006098525,0.00017893102,0.001274334,0.00010028738,0.009663626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996785,0.00006399436,0.000037174785,0.00006768265,0.00005752304,0.00009509386],"domain_scores_gemma":[0.9993814,0.000052791213,0.00016650009,0.00007548144,0.000036314337,0.0002873699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003033373,0.00073892623,0.0005072808,0.0007608856,0.00023989104,0.00044257694,0.0003622463,0.00075285975,0.0021288372],"category_scores_gemma":[0.00019664373,0.00027511985,0.00036612817,0.00018880772,0.00049360335,0.0003359743,0.0003071302,0.0013307806,0.0006020175],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012076354,0.00034343632,0.00021003906,0.000044121276,0.000010941432,0.000090471505,0.000022615312,0.00009865987,0.99567103,0.00021626604,0.000109787215,0.0019750819],"study_design_scores_gemma":[0.00035573897,0.007239089,0.00987188,0.00006872757,0.00006738129,0.0008248957,0.00009452556,0.001775899,0.9736742,0.00038541624,0.005616921,0.000025243779],"about_ca_topic_score_codex":0.00039173078,"about_ca_topic_score_gemma":0.00069933885,"teacher_disagreement_score":0.0021288372,"about_ca_system_score_codex":0.00024819863,"about_ca_system_score_gemma":0.0003452667,"threshold_uncertainty_score":0.007121682},"labels":[],"label_agreement":null},{"id":"W4379093637","doi":"10.1159/000527708","title":"Adsorption of Endotoxin and Mitigation of Sepsis","year":2023,"lang":"en","type":"review","venue":"Contributions to nephrology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iridian Spectral Technologies (Canada)","funders":"","keywords":"Hemoperfusion; Medicine; Sepsis; Septic shock; Polymyxin; Polymyxin B; Resuscitation; Extracorporeal; Intensive care medicine; Pharmacology; Adverse effect; Immunology; Antibiotics; Internal medicine; Microbiology; Anesthesia; Biology","score_opus":0.02216539482929658,"score_gpt":0.3239563872213173,"score_spread":0.30179099239202073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379093637","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000082533785,0.9987105,0.00009006142,0.0002319935,0.0003367354,0.0000029097391,0.0000072764747,0.000005953,0.0005320088],"genre_scores_gemma":[0.00054543716,0.99867,0.000095596115,0.00015185273,0.00018553063,0.0000050331646,0.000012827375,0.0000014635071,0.00033233353],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997495,0.000053157994,0.00003367376,0.000043182292,0.00009240387,0.000028076214],"domain_scores_gemma":[0.99972874,0.00012519641,0.00003483037,0.000012035985,0.000070280745,0.000028954255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070067804,0.0008529034,0.0011865771,0.0021845887,0.00028614092,0.0009205355,0.0008547356,0.0012042595,0.002974487],"category_scores_gemma":[0.00091671234,0.0002823973,0.00053238583,0.0015221693,0.0006236189,0.0013449455,0.0008487449,0.0025280553,0.0022254442],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011918259,0.00012844405,0.00017897175,0.016269695,0.000101999154,0.00019060839,0.000085233565,0.0004843721,0.0022922088,0.007820324,0.034313165,0.9380157],"study_design_scores_gemma":[0.000018947914,0.0001296758,0.0006276603,0.0028175653,0.000061457264,0.00076005555,0.00004067221,0.00008537315,0.0006341735,0.0029710548,0.9918366,0.000016624643],"about_ca_topic_score_codex":0.0006546071,"about_ca_topic_score_gemma":0.0009155243,"teacher_disagreement_score":0.002974487,"about_ca_system_score_codex":0.00055608415,"about_ca_system_score_gemma":0.0008743048,"threshold_uncertainty_score":0.009950638},"labels":[],"label_agreement":null},{"id":"W4380989649","doi":"10.1016/j.jmii.2023.06.002","title":"Implication of myddosome complex genetic variants in outcome severity of COVID-19 patients","year":2023,"lang":"en","type":"article","venue":"Journal of Microbiology Immunology and Infection","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Consejo Nacional de Ciencia y Tecnología","keywords":"Coronavirus disease 2019 (COVID-19); 2019-20 coronavirus outbreak; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Outcome (game theory); Medicine; Internal medicine; Virology; Mathematics; Outbreak; Disease","score_opus":0.021087964959449694,"score_gpt":0.2818935616104574,"score_spread":0.2608055966510077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380989649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99897254,0.00020350872,0.000113416456,0.000051761737,0.000009629197,0.000005124632,0.00027869613,0.0000028252311,0.00036244115],"genre_scores_gemma":[0.999617,0.000033714052,0.000068751615,0.000013569923,0.000009812453,0.0000036119313,0.0001497386,0.0000016447622,0.00010209883],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99971944,0.000071737704,0.000029070357,0.00009055437,0.000034226054,0.000054982123],"domain_scores_gemma":[0.9992779,0.00012437065,0.00036836282,0.000043837146,0.000046993402,0.00013868543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004103579,0.0003169807,0.00026384034,0.0003021565,0.00028993216,0.00041821442,0.00026249522,0.0003893716,0.0034321896],"category_scores_gemma":[0.0012363814,0.0001076339,0.0003798085,0.00035336043,0.0002064024,0.00021006768,0.0003403943,0.0004683812,0.00023902438],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064152235,0.000031378066,0.9962662,0.000016653768,0.00006034671,0.00029340587,0.0000441274,0.000051102248,0.0010004948,0.000048968926,0.00012822819,0.0014175109],"study_design_scores_gemma":[0.000023491028,0.000179172,0.9974433,0.000014027601,0.00008704501,0.0011814566,0.00009046899,0.0003268865,0.00029152632,0.00014268336,0.00021433205,0.0000055891514],"about_ca_topic_score_codex":0.00069748017,"about_ca_topic_score_gemma":0.00076078076,"teacher_disagreement_score":0.0034321896,"about_ca_system_score_codex":0.00016393515,"about_ca_system_score_gemma":0.00015838532,"threshold_uncertainty_score":0.011481822},"labels":[],"label_agreement":null},{"id":"W4381510384","doi":"10.1186/s13054-023-04533-3","title":"Targeted therapy using polymyxin B hemadsorption in patients with sepsis: a post-hoc analysis of the JSEPTIC-DIC study and the EUPHRATES trial","year":2023,"lang":"en","type":"article","venue":"Critical Care","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iridian Spectral Technologies (Canada)","funders":"","keywords":"Medicine; Septic shock; Sepsis; Internal medicine; Retrospective cohort study; Cohort; Cohort study","score_opus":0.013911118894845018,"score_gpt":0.27753052162331904,"score_spread":0.263619402728474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381510384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897362,0.006521757,0.0011574514,0.00034570706,0.00021164646,0.00025265722,0.001195606,0.000019054305,0.0005598484],"genre_scores_gemma":[0.9970395,0.00055687234,0.00042861255,0.0002117234,0.00018427664,0.00018519117,0.0012004286,0.000011186535,0.00018216553],"study_design_codex":"randomized_trial","study_design_gemma":"observational","domain_scores_codex":[0.98801386,0.009065603,0.0006453038,0.0010674823,0.0005177244,0.00069002894],"domain_scores_gemma":[0.977247,0.014516026,0.0038011142,0.0026560205,0.00077721773,0.0010026322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015569742,0.0010146106,0.003306498,0.00042917614,0.00031197656,0.0011977399,0.0008287091,0.0008140889,0.001659967],"category_scores_gemma":[0.016915873,0.000334719,0.008581002,0.00061730744,0.0004878285,0.00092252594,0.000817463,0.0016691611,0.00012945457],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.54362136,0.00079165667,0.29097813,0.0022323283,0.12980649,0.00058535486,0.00020786634,0.0050335275,0.0017696478,0.00066942006,0.0030296089,0.021274574],"study_design_scores_gemma":[0.110162035,0.042991646,0.646443,0.00054687355,0.16836427,0.00067063153,0.00041381677,0.02049651,0.0019322811,0.0026021143,0.0051636454,0.0002132099],"about_ca_topic_score_codex":0.000843072,"about_ca_topic_score_gemma":0.0012851837,"teacher_disagreement_score":0.015569742,"about_ca_system_score_codex":0.00053267286,"about_ca_system_score_gemma":0.0010140317,"threshold_uncertainty_score":0.08234167},"labels":[],"label_agreement":null},{"id":"W4381612093","doi":"10.3892/mco.2023.2656","title":"Toll‑like receptor 3 ligands for breast cancer therapies (Review)","year":2023,"lang":"en","type":"review","venue":"Molecular and Clinical Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Wilfrid Laurier University","keywords":"Breast cancer; Cancer; TLR3; Medicine; Toll-like receptor; Immunotherapy; Cancer research; Immune system; Immunology; Innate immune system; Internal medicine","score_opus":0.07855815672911481,"score_gpt":0.44553356843379843,"score_spread":0.3669754117046836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4381612093","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013096989,0.9970187,0.00015770934,0.00023120128,0.0006521811,0.000015684516,0.000048375612,0.000017171144,0.0017280437],"genre_scores_gemma":[0.0006478966,0.99672276,0.00023375328,0.0003706321,0.00027618118,0.000016732722,0.000093701754,0.0000026145367,0.0016357991],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.9998282,0.000025068464,0.000022146864,0.000026591448,0.00007799332,0.000020006211],"domain_scores_gemma":[0.9998394,0.000056526595,0.000032266267,0.0000052117734,0.00004807687,0.000018491795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030270923,0.0009034623,0.0009223248,0.0016875025,0.00021329187,0.00084033667,0.00074925506,0.0008581268,0.0076286676],"category_scores_gemma":[0.00043160518,0.00021111078,0.0005669768,0.0013635792,0.00021114784,0.0008978272,0.0005102813,0.001742204,0.004366327],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006462019,0.00006541827,0.000070170434,0.01697524,0.000086622655,0.00011198146,0.00003153246,0.00025969662,0.0019973079,0.0016160231,0.059404213,0.9193171],"study_design_scores_gemma":[0.00001991555,0.00007459893,0.0003715614,0.0028456438,0.00007715001,0.0006914848,0.000018606137,0.000042542702,0.00034992868,0.000552636,0.9949452,0.000010651336],"about_ca_topic_score_codex":0.0007171729,"about_ca_topic_score_gemma":0.0012913704,"teacher_disagreement_score":0.0076286676,"about_ca_system_score_codex":0.00041563282,"about_ca_system_score_gemma":0.0008096043,"threshold_uncertainty_score":0.025520504},"labels":[],"label_agreement":null},{"id":"W4382047042","doi":"10.1007/978-1-0716-3338-0_1","title":"Bacterial Binding, Phagocytosis, and Killing Capacity: Measurements Using Colony Forming Units","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Phagocytosis; Opsonin; Colony-forming unit; Bacterial colony; Microbiology; Bacteria; Immunofluorescence; Biology; Phagocyte; Chemistry; Immunology; Antibody; Genetics","score_opus":0.10611573929605823,"score_gpt":0.38248104058017834,"score_spread":0.2763653012841201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047042","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75506026,0.013795708,0.1976786,0.00088385574,0.0007856652,0.0030395223,0.007936201,0.0030423035,0.017777868],"genre_scores_gemma":[0.74694395,0.0055706063,0.21039255,0.00062789925,0.0004178058,0.005536435,0.010316488,0.0004881716,0.019706016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9907132,0.0026934724,0.0008577795,0.0010471457,0.003796187,0.00089227204],"domain_scores_gemma":[0.9939346,0.002558951,0.00063845754,0.0008580671,0.0012918703,0.0007181356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034746013,0.0032367308,0.00214939,0.0033159226,0.0010654462,0.0015006526,0.0020731161,0.0028438885,0.003748612],"category_scores_gemma":[0.003982327,0.0011345893,0.0010229002,0.004414902,0.0020932993,0.0015361346,0.0019139042,0.004321449,0.0024463825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019690662,0.0013705265,0.005712099,0.0004156762,0.00010684115,0.00010004296,0.0006089579,0.0004553127,0.9739111,0.00071800733,0.00073910854,0.013893359],"study_design_scores_gemma":[0.00007869941,0.0022500267,0.016607555,0.00004309116,0.0000932571,0.00041639135,0.00023655925,0.0039879805,0.97403324,0.00035342245,0.0018200414,0.000079731355],"about_ca_topic_score_codex":0.0013339499,"about_ca_topic_score_gemma":0.0011189592,"teacher_disagreement_score":0.003748612,"about_ca_system_score_codex":0.00047699394,"about_ca_system_score_gemma":0.0009263795,"threshold_uncertainty_score":0.018375695},"labels":[],"label_agreement":null},{"id":"W4382198941","doi":"10.1101/2023.06.27.545921","title":"Paridiprubart inhibits TLR4-dependant NF-κB activation by multiple pathogens","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Canada Research Chairs; Sunnybrook Hospital; University of Toronto","funders":"","keywords":"TLR4; Cytokine storm; HMGB1; ARDS; Innate immune system; Immunology; Inflammation; Lipopolysaccharide; Receptor; Immune system; Biology; Context (archaeology); Proinflammatory cytokine; Pattern recognition receptor; Agonist; Pathogen; Toll-like receptor; Medicine; Lung; Coronavirus disease 2019 (COVID-19); Internal medicine","score_opus":0.015316942980085683,"score_gpt":0.211487014815904,"score_spread":0.19617007183581833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382198941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858598,0.0050848206,0.0025857755,0.0003280234,0.00017518655,0.00011799903,0.0005105104,0.0004736266,0.0048642056],"genre_scores_gemma":[0.9943516,0.0014611091,0.0011905323,0.00017825521,0.00004386094,0.00007112052,0.00064921624,0.000019280096,0.002034905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998908,0.000019702273,0.00001077489,0.00001400661,0.000021187669,0.000043535427],"domain_scores_gemma":[0.9999299,0.000013861634,0.00001547789,0.00000916219,0.000008395143,0.0000232506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000116237345,0.0004301487,0.00041339057,0.00031311065,0.00017491855,0.00022585114,0.00043219083,0.00037443332,0.0031816864],"category_scores_gemma":[0.00015400891,0.00018968938,0.00028179484,0.00016829355,0.00019403694,0.0001944952,0.00017160297,0.00096179685,0.00069873326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021633005,0.0011439616,0.00019137426,0.00021715324,0.000042269497,0.00012476475,0.00001724788,0.00022776202,0.98163867,0.00012890258,0.0006430983,0.013461536],"study_design_scores_gemma":[0.00085295545,0.009756928,0.0053123767,0.000021062606,0.00006771552,0.0011515345,0.000029223018,0.002396726,0.9737172,0.000100839556,0.0065776445,0.000015801377],"about_ca_topic_score_codex":0.00031788286,"about_ca_topic_score_gemma":0.00041461465,"teacher_disagreement_score":0.0031816864,"about_ca_system_score_codex":0.00019198442,"about_ca_system_score_gemma":0.00021740653,"threshold_uncertainty_score":0.01064384},"labels":[],"label_agreement":null},{"id":"W4382933746","doi":"10.1016/j.dci.2023.104767","title":"Expression of Interleukin-1β protein in vitro, ex vivo and in vivo salmonid models","year":2023,"lang":"en","type":"article","venue":"Developmental & Comparative Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; University of Waterloo","funders":"","keywords":"Ex vivo; Biology; In vivo; Cell biology; In vitro; Interleukin; Immunology; Cytokine; Genetics","score_opus":0.02846877920638302,"score_gpt":0.266768166761845,"score_spread":0.23829938755546198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382933746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98005635,0.0019703058,0.0107149985,0.00026355687,0.0002124528,0.00015131262,0.0018657515,0.0001576447,0.004607661],"genre_scores_gemma":[0.9491901,0.0032497046,0.01310067,0.00018489375,0.000082420105,0.00043596368,0.0047064503,0.0001012742,0.028948527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954873,0.000057307898,0.00005944871,0.000103217586,0.00012270773,0.000108520864],"domain_scores_gemma":[0.99961215,0.00005083931,0.00009006754,0.000056055076,0.00009840421,0.00009246265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005115921,0.0006631716,0.00036949082,0.000593814,0.0003332594,0.0006018147,0.00027282906,0.00040992626,0.0020890117],"category_scores_gemma":[0.00019138202,0.00032820512,0.0005755098,0.00028277072,0.00047653745,0.0004666514,0.0003068779,0.0017576279,0.0009276515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016955154,0.000038297076,0.00013374478,0.0000283867,0.0000029428606,0.000026895936,0.000026788266,0.000031170504,0.999092,0.00007323578,0.000033928678,0.00034298416],"study_design_scores_gemma":[0.000035188572,0.0010671057,0.0036039625,0.000012183934,0.00003168435,0.00019605207,0.00013670452,0.00049474475,0.99169123,0.000058649657,0.002663129,0.000009352701],"about_ca_topic_score_codex":0.0012752715,"about_ca_topic_score_gemma":0.0023269088,"teacher_disagreement_score":0.0020890117,"about_ca_system_score_codex":0.00050558837,"about_ca_system_score_gemma":0.0005247594,"threshold_uncertainty_score":0.006988466},"labels":[],"label_agreement":null},{"id":"W4383273118","doi":"10.3390/immuno3030017","title":"The Importance of Neutrophils in Osteoarthritis: Current Concepts and Therapeutic Perspectives","year":2023,"lang":"en","type":"article","venue":"Immuno","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Osteoarthritis; Innate immune system; Proinflammatory cytokine; Inflammation; Chemokine; Immune system; Immunology; Neutrophil extracellular traps; Medicine; Acquired immune system; Pathophysiology; Biology; Pathology","score_opus":0.012168052839925407,"score_gpt":0.2868717031694077,"score_spread":0.2747036503294823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383273118","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034001135,0.9961748,0.00029406496,0.0021254632,0.00046926088,0.0000059944637,0.00001200408,0.000007460885,0.0005709608],"genre_scores_gemma":[0.0033547438,0.99350595,0.00045632236,0.0009368437,0.0012657362,0.00002133601,0.000029322775,0.0000019735846,0.0004277757],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996251,0.00010311341,0.00005707354,0.000057765086,0.00009628722,0.00006067867],"domain_scores_gemma":[0.99931407,0.000272926,0.000091065296,0.000029322475,0.00018894668,0.00010372012],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016555146,0.0007301578,0.0013172219,0.0009591106,0.00039273547,0.0021597985,0.0010496796,0.0023622403,0.0026158914],"category_scores_gemma":[0.0009277146,0.00025282786,0.00053771696,0.00085146376,0.0012589259,0.002551468,0.0010365833,0.003057562,0.0012006137],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006661925,0.00029155967,0.00093185186,0.014177135,0.00010632176,0.000625577,0.0002303251,0.0005436631,0.009274703,0.020405993,0.03353107,0.9192157],"study_design_scores_gemma":[0.00016962214,0.001038175,0.0025312158,0.006365576,0.00024703422,0.0025396533,0.00048213778,0.0006787545,0.0028487518,0.021853426,0.9611771,0.000068486435],"about_ca_topic_score_codex":0.00048431996,"about_ca_topic_score_gemma":0.0010012401,"teacher_disagreement_score":0.0026158914,"about_ca_system_score_codex":0.00060246664,"about_ca_system_score_gemma":0.0014364361,"threshold_uncertainty_score":0.008755326},"labels":[],"label_agreement":null},{"id":"W4383533700","doi":"10.3389/fimmu.2023.1171212","title":"Immune responses in the uterine mucosa: clues for vaccine development in pigs","year":2023,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs; Innovation Saskatchewan; Innovation, Science and Economic Development Canada; Ministry of Agriculture - Saskatchewan","keywords":"Immune system; Immunity; Uterus; Biology; Fetus; Offspring; Immunology; Uterine horns; Immunization; Pregnancy; Female Reproductive Tract; Physiology; Endocrinology","score_opus":0.03471453534731704,"score_gpt":0.315163325859339,"score_spread":0.28044879051202193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383533700","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014375157,0.9982009,0.00012244718,0.00032115122,0.0003919537,0.0000033539823,0.0000130498875,0.000005213818,0.0007981718],"genre_scores_gemma":[0.00065636996,0.99804306,0.00013340956,0.0002643107,0.00031481142,0.0000055887585,0.000024502682,0.0000011513055,0.00055679685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999006,0.000018994644,0.000012531367,0.000021951053,0.000029795976,0.000016139282],"domain_scores_gemma":[0.9998772,0.000055353008,0.000018337478,0.0000038135845,0.000028302786,0.000017028013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047728393,0.00058890507,0.0008217691,0.0011253715,0.00018066786,0.0008647248,0.00051681756,0.0011593822,0.0023715713],"category_scores_gemma":[0.0003241721,0.00019130668,0.00032871868,0.00087659457,0.0003767668,0.0011679444,0.00060548156,0.0015908774,0.0016776634],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009726018,0.00006863892,0.0002041072,0.014247233,0.000045699882,0.00021719889,0.0000857499,0.00025357306,0.0069237794,0.0053616315,0.025286889,0.9472083],"study_design_scores_gemma":[0.000013669613,0.00023292578,0.0012800734,0.0041190237,0.00007806844,0.0010774417,0.00011405634,0.00008778501,0.001257201,0.002950945,0.98876953,0.00001922855],"about_ca_topic_score_codex":0.00040784615,"about_ca_topic_score_gemma":0.00062465336,"teacher_disagreement_score":0.0023715713,"about_ca_system_score_codex":0.00038679116,"about_ca_system_score_gemma":0.0005941403,"threshold_uncertainty_score":0.007933736},"labels":[],"label_agreement":null},{"id":"W4383736226","doi":"10.3390/vetsci10070445","title":"Early-Life Exposure to Lipopolysaccharide Induces Persistent Changes in Gene Expression Profiles in the Liver and Spleen of Female FVB/N Mice","year":2023,"lang":"en","type":"article","venue":"Veterinary Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Prion Research Institute; Alberta Livestock and Meat Agency; University of Alberta","keywords":"TLR2; Chemokine; Spleen; TLR4; Cytokine; Biology; CXCL5; Immunology; Lipopolysaccharide; Endocrinology; Internal medicine; Medicine; Immune system","score_opus":0.05887112188372579,"score_gpt":0.27785440189155425,"score_spread":0.21898328000782846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383736226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947408,0.00094899756,0.0015914324,0.00015144538,0.00004051101,0.000031057225,0.0016133658,0.00006433078,0.0008180972],"genre_scores_gemma":[0.9837156,0.0015485501,0.003200425,0.00032805122,0.00003157087,0.0002324628,0.0027138186,0.00008297978,0.008146527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997391,0.000020933994,0.000017145683,0.00009011962,0.000060475526,0.00007224505],"domain_scores_gemma":[0.999739,0.000018741197,0.00009125037,0.0000205476,0.00003292151,0.00009750843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018447367,0.00051548745,0.00040304405,0.0007979361,0.00019762207,0.000318745,0.00015692638,0.00037108443,0.0015936458],"category_scores_gemma":[0.0001263203,0.0002771922,0.0003717037,0.00027317106,0.00043798587,0.00025853634,0.00022064823,0.0009767268,0.00060031353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006771564,0.00008151905,0.0009096034,0.000023389857,0.000005831148,0.000060919254,0.000025494584,0.000019170484,0.99747986,0.000019991758,0.000029647968,0.0006674694],"study_design_scores_gemma":[0.00015035541,0.0040533273,0.1722263,0.000045213692,0.000088406596,0.00094181416,0.00052673393,0.0008164376,0.81798077,0.0002323692,0.0029004687,0.00003774101],"about_ca_topic_score_codex":0.00049289083,"about_ca_topic_score_gemma":0.0008535856,"teacher_disagreement_score":0.0015936458,"about_ca_system_score_codex":0.00024793064,"about_ca_system_score_gemma":0.00018924965,"threshold_uncertainty_score":0.005331278},"labels":[],"label_agreement":null},{"id":"W4385344549","doi":"10.1038/s41598-023-39210-6","title":"Adjuvant effects of combination monophosphoryl lipid A and poly I:C on antigen-specific immune responses and protective efficacy of influenza vaccines","year":2023,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institutes of Health; National Institute of Allergy and Infectious Diseases; Ministry of Science and ICT, South Korea; National Research Foundation of Korea; Jeju National University; National Research Foundation","keywords":"Adjuvant; Immune system; Lipid A; Antigen; Immunology; Medicine; Influenza vaccine; Antibody response; Vaccine adjuvant; Vaccination; Lipopolysaccharide","score_opus":0.010702183583924094,"score_gpt":0.24696522286809539,"score_spread":0.2362630392841713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385344549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970318,0.0016330458,0.00047194547,0.000045790704,0.000033043136,0.00004301946,0.00006411948,0.00001563356,0.00066156266],"genre_scores_gemma":[0.9973878,0.00075959065,0.0011800935,0.000049095077,0.00002640597,0.000034622848,0.00006297888,0.000004269115,0.0004951129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998964,0.000031915442,0.000010420438,0.000014100803,0.000020851465,0.00002628868],"domain_scores_gemma":[0.9998957,0.000018296172,0.000033656015,0.000009847198,0.000010671941,0.00003181456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015702308,0.00035341905,0.00023610723,0.00024112381,0.00008826807,0.00016146187,0.000178798,0.00023682439,0.00078790734],"category_scores_gemma":[0.00014482895,0.00008856983,0.00017820655,0.000111949674,0.0001754049,0.00018963711,0.00017205156,0.00034424188,0.00017103855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022983123,0.00046009815,0.00042735031,0.00015779899,0.000023182529,0.000043547156,0.0000144064725,0.00027566624,0.98775977,0.0000526059,0.00004820782,0.008438979],"study_design_scores_gemma":[0.0002402712,0.013529093,0.0064844466,0.000025390513,0.00015706584,0.00018219036,0.00003641886,0.0014745651,0.9755307,0.000054949945,0.0022733533,0.00001151351],"about_ca_topic_score_codex":0.0002979292,"about_ca_topic_score_gemma":0.00044922167,"teacher_disagreement_score":0.00078790734,"about_ca_system_score_codex":0.00011098541,"about_ca_system_score_gemma":0.00019966476,"threshold_uncertainty_score":0.0026358366},"labels":[],"label_agreement":null},{"id":"W4385484256","doi":"10.1016/j.bj.2023.100637","title":"The effects of NOD-like receptors on adaptive immune responses","year":2023,"lang":"en","type":"review","venue":"Biomedical Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canadian Association of Gastroenterology","keywords":"Immune system; Receptor; Nod; Immune receptor; Immunology; Acquired immune system; Biology; Pattern recognition receptor; Medicine; Immunity; Diabetes mellitus; Endocrinology; Genetics","score_opus":0.030040644110021025,"score_gpt":0.3147692799696931,"score_spread":0.2847286358596721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385484256","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009936148,0.99850804,0.000114420225,0.0001631927,0.00022688913,0.0000018908256,0.000008689606,0.0000050833037,0.0008723912],"genre_scores_gemma":[0.00084354455,0.99819225,0.00009362653,0.000153256,0.00026656484,0.0000035564335,0.000015048759,9.3481265e-7,0.00043118792],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99980956,0.000033451306,0.000028052369,0.000035689507,0.000073027375,0.000020242433],"domain_scores_gemma":[0.99980074,0.00008321007,0.000027657647,0.000008307119,0.00004815972,0.000031976942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061700394,0.00083740987,0.0009961397,0.0013752262,0.00022772954,0.0007902243,0.00070918095,0.0009121174,0.002209244],"category_scores_gemma":[0.0005482699,0.00023375908,0.00030467805,0.0011394047,0.000636945,0.0012113849,0.00084032863,0.0016845368,0.0019489068],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109371664,0.00003984184,0.00016696953,0.013874556,0.00005221671,0.0003925197,0.00009144343,0.00042179466,0.005988206,0.008840058,0.022559712,0.94746333],"study_design_scores_gemma":[0.000014556578,0.00011307839,0.0010766606,0.0026020932,0.000045023688,0.0017125104,0.000057022567,0.00006829669,0.00128883,0.0037622664,0.9892407,0.000018899369],"about_ca_topic_score_codex":0.000410504,"about_ca_topic_score_gemma":0.00057513197,"teacher_disagreement_score":0.002209244,"about_ca_system_score_codex":0.00047657816,"about_ca_system_score_gemma":0.0005132782,"threshold_uncertainty_score":0.007390678},"labels":[],"label_agreement":null},{"id":"W4385488201","doi":"10.1101/2023.07.31.549036","title":"Comparative Analysis of Methods to Reduce Activation Signature Gene Expression in PBMCs","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital; Université de Montréal","funders":"Courtois Foundation; Centre Hospitalier Universitaire de Québec; Université Laval; Schlumberger Foundation; Fonds de Recherche du Québec - Santé; Michael J. Fox Foundation for Parkinson's Research","keywords":"Transcriptome; Peripheral blood mononuclear cell; Ex vivo; Gene expression; Gene expression profiling; Biology; Gene signature; Gene; Transcription (linguistics); In vivo; Regulation of gene expression; Cell biology; Computational biology; In vitro; Genetics","score_opus":0.036295769382505526,"score_gpt":0.31630771132546665,"score_spread":0.28001194194296114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385488201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7505065,0.010249864,0.22050968,0.0005643264,0.0006454612,0.00066681847,0.009883522,0.00089303986,0.0060808356],"genre_scores_gemma":[0.69021636,0.0072538173,0.26642606,0.00095472153,0.0003357847,0.00283674,0.022160234,0.0012798511,0.008536419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986326,0.00028096262,0.00011512158,0.00032762354,0.00052672456,0.00011686123],"domain_scores_gemma":[0.9991849,0.00034541174,0.00012491654,0.00010327265,0.00020178253,0.000039700044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010849476,0.00058978784,0.00060728705,0.00061899325,0.00033571257,0.0008952833,0.0003182282,0.00034234335,0.0020895447],"category_scores_gemma":[0.0011807408,0.00019975008,0.00063518644,0.00059358595,0.0003877575,0.0002517807,0.0003709115,0.0008912613,0.0012640974],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021377699,0.000021292819,0.00043684407,0.00016805892,0.000019849344,0.000019653726,0.00003294486,0.00018552977,0.9933537,0.00007639395,0.00013626007,0.005335706],"study_design_scores_gemma":[0.000012162708,0.00028238574,0.0074908845,0.000021952188,0.00007076171,0.00013291098,0.00006567051,0.0010088781,0.9844823,0.0001284139,0.006287282,0.000016399414],"about_ca_topic_score_codex":0.0003726867,"about_ca_topic_score_gemma":0.0006270942,"teacher_disagreement_score":0.0020895447,"about_ca_system_score_codex":0.00040393855,"about_ca_system_score_gemma":0.00046036293,"threshold_uncertainty_score":0.0069901943},"labels":[],"label_agreement":null},{"id":"W4386003096","doi":"10.1016/j.bj.2023.100655","title":"Nod-like receptors in inflammatory arthritis","year":2023,"lang":"en","type":"review","venue":"Biomedical Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Canadian Institutes of Health Research; Krembil Foundation; Arthritis Society","keywords":"Nod; Arthritis; Receptor; Inflammatory arthritis; Medicine; Immunology; Inflammation; Internal medicine; Diabetes mellitus; Endocrinology","score_opus":0.031736312029669714,"score_gpt":0.3062120283873082,"score_spread":0.2744757163576385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386003096","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007826004,0.9979475,0.000079828395,0.00019690584,0.00031822769,0.000004746311,0.000016736021,0.0000074692243,0.0013502542],"genre_scores_gemma":[0.00060709723,0.9975756,0.00012569352,0.00021371666,0.00024915577,0.000006054141,0.000037973405,0.0000014393952,0.0011833255],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998474,0.00002612442,0.000025776144,0.000024954663,0.000058643047,0.000017104063],"domain_scores_gemma":[0.9998306,0.00005886608,0.000028243605,0.000006665628,0.000049837883,0.00002572645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041177313,0.0006915445,0.00094431534,0.0017372915,0.00025181047,0.00086209463,0.0005771913,0.0009040052,0.0057154107],"category_scores_gemma":[0.00048049664,0.00019095678,0.00040407508,0.0017452693,0.00036204382,0.0010196742,0.00070741004,0.0015582696,0.004239791],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009307202,0.00006478541,0.00017077944,0.016307963,0.0000617833,0.00025146993,0.00006717152,0.000224772,0.002293504,0.0037831704,0.047002576,0.9296789],"study_design_scores_gemma":[0.000013466264,0.00006618978,0.00055452593,0.0025206062,0.00004482624,0.0011741071,0.000040302682,0.00003259851,0.0002853935,0.0015071105,0.99374974,0.000011231629],"about_ca_topic_score_codex":0.00070751354,"about_ca_topic_score_gemma":0.0011326942,"teacher_disagreement_score":0.0057154107,"about_ca_system_score_codex":0.00038964304,"about_ca_system_score_gemma":0.00092159293,"threshold_uncertainty_score":0.019119918},"labels":[],"label_agreement":null},{"id":"W4386019255","doi":"10.1007/978-1-0716-3366-3_2","title":"Development of Optimal Virtual Screening Strategies to Identify Novel Toll-Like Receptor Ligands Using the DockBox Suite","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Virtual screening; Toll; Suite; Toll-like receptor; Computational biology; Computer science; Receptor; Set (abstract data type); Medicine; Biology; Bioinformatics; Immunology; Innate immune system; Drug discovery; Geography; Genetics","score_opus":0.052508092693867435,"score_gpt":0.41640780639367625,"score_spread":0.36389971369980884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386019255","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4810161,0.004238067,0.4793179,0.0008096596,0.00020135604,0.0007529686,0.004778876,0.016007502,0.01287758],"genre_scores_gemma":[0.63085043,0.0021273135,0.3579162,0.00023599663,0.000027183476,0.0007955185,0.0054684207,0.00081002555,0.0017689083],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9994722,0.00018658888,0.000029522958,0.00007837468,0.00016242662,0.000070940056],"domain_scores_gemma":[0.9996977,0.0001618186,0.000019789339,0.000034322486,0.00004876627,0.00003764051],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010465208,0.001512661,0.0019488113,0.000880311,0.00042219422,0.0014530101,0.0013681678,0.0005043316,0.0030956343],"category_scores_gemma":[0.0018334395,0.0004453829,0.0012230212,0.0006798559,0.00024815626,0.0009736124,0.0011831434,0.001172149,0.0011059326],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002486546,0.0014662571,0.006284845,0.0014181152,0.0008906425,0.0005431654,0.00012280843,0.56839174,0.12829944,0.01781147,0.015021671,0.25726327],"study_design_scores_gemma":[0.00023770126,0.00041500176,0.0005383983,0.000031846383,0.0001068476,0.00012866777,0.000042672717,0.9607225,0.03020703,0.003795676,0.003731244,0.000042445343],"about_ca_topic_score_codex":0.0010017186,"about_ca_topic_score_gemma":0.0017659602,"teacher_disagreement_score":0.0030956343,"about_ca_system_score_codex":0.0004532289,"about_ca_system_score_gemma":0.001250649,"threshold_uncertainty_score":0.01035589},"labels":[],"label_agreement":null},{"id":"W4386306298","doi":"10.1007/s00223-023-01126-8","title":"Association of Immune Cell Subsets with Incident Hip Fracture: The Cardiovascular Health Study","year":2023,"lang":"en","type":"article","venue":"Calcified Tissue International","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Neurological Disorders and Stroke; National Heart, Lung, and Blood Institute; National Institute on Aging; National Institutes of Health; Rheumatology Research Foundation; U.S. Department of Veterans Affairs","keywords":"Hazard ratio; Medicine; Hip fracture; Internal medicine; Incidence (geometry); Immune system; Prospective cohort study; Proportional hazards model; Confidence interval; Cohort study; Cohort; Immunology; Peripheral blood mononuclear cell; Osteoporosis; Biology","score_opus":0.011875929007906832,"score_gpt":0.26419363208274166,"score_spread":0.2523177030748348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386306298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99885035,0.00027392476,0.00007302651,0.00003060835,0.0000092466635,0.0000052639994,0.00041440432,0.0000024247245,0.00034070175],"genre_scores_gemma":[0.99928916,0.00010305203,0.000049747992,0.000027506141,0.000015822043,0.000006664769,0.00034268154,0.0000015560895,0.00016385516],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995415,0.000113779926,0.00004013708,0.00011838215,0.0000802087,0.000105998544],"domain_scores_gemma":[0.9992563,0.00009652572,0.0002623551,0.000102691934,0.000103700484,0.00017836718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050357333,0.00039223972,0.0006009151,0.0005961256,0.0005021562,0.0007996914,0.0005518616,0.00082824327,0.0010384233],"category_scores_gemma":[0.0011030177,0.0004245967,0.0006647596,0.0011485805,0.00031959184,0.0003734076,0.0005047883,0.00096241065,0.00014592559],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051419344,0.000050580133,0.9980934,0.000005586078,0.00021869161,0.000056224453,0.000031956635,0.000027125461,0.0004503605,0.000015063508,0.0000797931,0.00045684318],"study_design_scores_gemma":[0.000017633267,0.0000884461,0.9994025,0.0000021065455,0.00007242536,0.00012307968,0.00007492419,0.00008311174,0.000042631076,0.00001759027,0.000071844,0.0000036493532],"about_ca_topic_score_codex":0.0068586804,"about_ca_topic_score_gemma":0.0075843045,"teacher_disagreement_score":0.0068586804,"about_ca_system_score_codex":0.0002198976,"about_ca_system_score_gemma":0.00028817204,"threshold_uncertainty_score":0.013637483},"labels":[],"label_agreement":null},{"id":"W4386503464","doi":"10.1080/14787210.2023.2256979","title":"Transcriptomics reveals shared immunosuppressive landscapes in ventilator-associated lower respiratory tract infections (VA-LRTI) patients","year":2023,"lang":"en","type":"article","venue":"Expert Review of Anti-infective Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Genome Canada; Dalhousie Medical Research Foundation","keywords":"Ventilator-associated pneumonia; Pneumonia; Respiratory tract; Medicine; Respiratory tract infections; Respiratory system; Immune system; Immunology; Lower respiratory tract infection; Internal medicine","score_opus":0.015226116764571293,"score_gpt":0.29390763799430686,"score_spread":0.27868152122973555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386503464","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968502,0.001595074,0.0005365789,0.00008991449,0.000010038518,0.000008647441,0.0005784349,0.000006978085,0.00032412662],"genre_scores_gemma":[0.9978041,0.0006751711,0.00049736706,0.00009116544,0.000027231914,0.000020148113,0.0007002804,0.000004118884,0.00018034464],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997465,0.00005978771,0.000022961929,0.00008635547,0.000037249854,0.000047064794],"domain_scores_gemma":[0.99968624,0.000084809486,0.00013563392,0.000017524893,0.00004347956,0.000032383632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002540367,0.00014792054,0.00035847083,0.0005256129,0.00019004349,0.00053485495,0.00013858695,0.0002815835,0.0010549256],"category_scores_gemma":[0.0005842889,0.00007624725,0.00021758571,0.00063751836,0.00018261178,0.00016122265,0.00024088229,0.00022440267,0.00017088337],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00084145076,0.000078119316,0.909438,0.0001927659,0.00016968416,0.0005274545,0.00049821084,0.00021998797,0.05973804,0.00017084874,0.00055374665,0.02757171],"study_design_scores_gemma":[0.0000053190593,0.000111628666,0.9962483,0.000019743167,0.000051529343,0.000558506,0.00036512103,0.00042158962,0.0014119734,0.00017101197,0.0006294399,0.00000584976],"about_ca_topic_score_codex":0.00038125282,"about_ca_topic_score_gemma":0.0006041204,"teacher_disagreement_score":0.0010549256,"about_ca_system_score_codex":0.00013873201,"about_ca_system_score_gemma":0.00014021246,"threshold_uncertainty_score":0.0035290122},"labels":[],"label_agreement":null},{"id":"W4386526394","doi":"10.1038/s41598-023-41990-w","title":"TNF-α and Poly(I:C) induction of A20 and activation of NF-κB signaling are independent of ABCF1 in human airway epithelial cells","year":2023,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Waterloo; McMaster University","funders":"Canadian Institutes of Health Research","keywords":"NF-κB; NFKB1; Signal transduction; Cell biology; Tumor necrosis factor alpha; Airway; Chemistry; Immunology; Biology; Medicine; Gene; Transcription factor; Biochemistry","score_opus":0.014991077160064578,"score_gpt":0.24193958612441305,"score_spread":0.22694850896434848,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386526394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99358565,0.0022468346,0.0023096972,0.00012835396,0.000037688947,0.000043627984,0.00059229997,0.00004952943,0.0010063369],"genre_scores_gemma":[0.9950094,0.00086053443,0.001452826,0.000067286535,0.000011819413,0.00008679038,0.0010003236,0.000009635533,0.0015012905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99970585,0.0000496612,0.00004354996,0.000052545107,0.00009244364,0.000055905817],"domain_scores_gemma":[0.99984443,0.000027591279,0.000039773713,0.00003742239,0.000026291,0.0000243387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002402568,0.00022505062,0.0002715735,0.0001967208,0.00019177367,0.00041481643,0.000116391966,0.00030354183,0.0013580718],"category_scores_gemma":[0.00021390102,0.00015170575,0.0003637064,0.00016720493,0.0002533655,0.000209371,0.00017458727,0.00047260436,0.0006497868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119844175,0.000024550345,0.00020861626,0.000027880458,0.0000031462102,0.000053299183,0.000020884268,0.000019226447,0.9989588,0.000028595488,0.000021323649,0.0005138769],"study_design_scores_gemma":[0.000048698228,0.0005721229,0.017668264,0.000012288674,0.000018838437,0.0007208737,0.00009832491,0.0010919475,0.97671473,0.00006211627,0.0029846646,0.000007220957],"about_ca_topic_score_codex":0.0007905045,"about_ca_topic_score_gemma":0.0006708941,"teacher_disagreement_score":0.0013580718,"about_ca_system_score_codex":0.00028404337,"about_ca_system_score_gemma":0.00019206702,"threshold_uncertainty_score":0.0045431852},"labels":[],"label_agreement":null},{"id":"W4386744611","doi":"10.1101/2023.09.13.557392","title":"Adopting orphan receptors: group IX/X transition metals as potential ligands of zebrafish Tlr4 homologs","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta; Cancer Research Institute","keywords":"Zebrafish; TLR4; Biology; Gene knockdown; Homologous chromosome; Receptor; Function (biology); Cell biology; Genetics; Gene","score_opus":0.011606253197284828,"score_gpt":0.21425832569075667,"score_spread":0.20265207249347184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386744611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9572495,0.0028567847,0.026671747,0.0014967552,0.00029214215,0.00009104116,0.0012318826,0.0004961754,0.009614011],"genre_scores_gemma":[0.97274584,0.00091921556,0.009412045,0.00031080277,0.000024449493,0.000075172546,0.0006366006,0.00006108898,0.01581481],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986744,0.000012592408,0.0000070221117,0.000037504535,0.00004438644,0.000031018782],"domain_scores_gemma":[0.9999423,0.0000050942917,0.000022545682,0.0000068268764,0.000010498213,0.000012759867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015611255,0.00030410144,0.00016780515,0.00021938662,0.0002120521,0.00028928163,0.00021282138,0.0004911424,0.0043101814],"category_scores_gemma":[0.00013054666,0.00017761011,0.0003037317,0.00009911057,0.00034946026,0.00026727837,0.00053696893,0.00062861264,0.0010115944],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053114232,0.000003850133,0.00029366152,0.000030066005,0.000002839281,0.000067084824,0.000009994632,0.00007064235,0.9980447,0.00024259757,0.00012282727,0.0010585943],"study_design_scores_gemma":[0.000028880026,0.00018912015,0.0065482436,0.000022059407,0.00002306006,0.00047258695,0.000104435305,0.0013963523,0.9808564,0.0003481711,0.009997918,0.000012833926],"about_ca_topic_score_codex":0.0012182734,"about_ca_topic_score_gemma":0.0016736287,"teacher_disagreement_score":0.0043101814,"about_ca_system_score_codex":0.00043136353,"about_ca_system_score_gemma":0.0002691818,"threshold_uncertainty_score":0.014419019},"labels":[],"label_agreement":null},{"id":"W4387300260","doi":"10.1093/rheumatology/kead493","title":"Inhibition of TLR4 signalling to dampen joint inflammation in osteoarthritis","year":2023,"lang":"en","type":"review","venue":"Lara D. Veeken","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"H2020 European Research Council; Dutch Arthritis Society; Nederlandse Organisatie voor Wetenschappelijk Onderzoek; ZonMw; European Commission; Arthritis Society","keywords":"TLR4; Inflammation; Medicine; Pattern recognition receptor; Osteoarthritis; Receptor; Signalling; Innate immune system; HMGB1; Toll-like receptor; Immunology; Immune system; Signal transduction; Cell biology; Biology; Internal medicine; Pathology","score_opus":0.04023589370884667,"score_gpt":0.28807963319149854,"score_spread":0.24784373948265187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387300260","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021901407,0.99802965,0.00015105537,0.00019892395,0.000288731,0.0000061815795,0.000021434322,0.000010391705,0.0010746038],"genre_scores_gemma":[0.0008859351,0.99762577,0.00016250952,0.00018478512,0.00014794049,0.000008549153,0.000039036964,0.000002026352,0.0009434665],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987996,0.000018578758,0.00001655263,0.00001878686,0.00005147799,0.0000146104185],"domain_scores_gemma":[0.9998679,0.00004921204,0.00002043974,0.000004874023,0.000041399893,0.000016212183],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038971083,0.0006184926,0.0009928987,0.0013897087,0.00019168829,0.00068750675,0.0006298954,0.0008355054,0.0036197123],"category_scores_gemma":[0.00042979437,0.00024219266,0.00045121578,0.0009677284,0.00025109627,0.00076237856,0.0005050402,0.0015712574,0.0028289668],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013565044,0.00010084906,0.000107879656,0.017837973,0.00010266586,0.00026970162,0.00005355195,0.00040680077,0.0058951266,0.0037768967,0.034047827,0.9372651],"study_design_scores_gemma":[0.000028656275,0.00017603183,0.0005520079,0.002123659,0.00008811876,0.0011242168,0.000027400396,0.00008665156,0.0012614982,0.0010732309,0.9934416,0.00001698583],"about_ca_topic_score_codex":0.0005007813,"about_ca_topic_score_gemma":0.0010845565,"teacher_disagreement_score":0.0036197123,"about_ca_system_score_codex":0.00036648824,"about_ca_system_score_gemma":0.0005166043,"threshold_uncertainty_score":0.012109101},"labels":[],"label_agreement":null},{"id":"W4387409199","doi":"10.1016/j.matt.2023.09.007","title":"A bacterially engineered macrophage sponge as a neutralization decoy to treat bacterial infection","year":2023,"lang":"en","type":"article","venue":"Matter","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Fundo para o Desenvolvimento das Ciências e da Tecnologia; Science and Technology Development Fund; Science, Technology and Innovation Commission of Shenzhen Municipality; Universidade de Macau; National Natural Science Foundation of China","keywords":"Neutralization; Bacteria; Microbiology; Biology; Pathogen; Decoy; Immune system; Biofilm; Macrophage; Bacterial cell structure; Antibody; Receptor; Cell biology; Immunology; In vitro; Biochemistry","score_opus":0.007348093166815866,"score_gpt":0.23447151553699655,"score_spread":0.22712342237018068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387409199","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9551735,0.014501806,0.020606138,0.0013647308,0.0007904759,0.00018156298,0.00026454116,0.0004616162,0.0066556945],"genre_scores_gemma":[0.98315465,0.0037803533,0.006399345,0.00040439592,0.00007591247,0.000063444415,0.00013652613,0.000030355968,0.0059550465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993145,0.000014250861,0.0000036637405,0.000009685212,0.000019760317,0.000021177702],"domain_scores_gemma":[0.9999486,0.000009701741,0.000012068577,0.0000046667697,0.0000073919305,0.000017568018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021852713,0.00023525536,0.00023944405,0.00016139445,0.00012945912,0.00022156,0.0002210953,0.00032943243,0.0011227758],"category_scores_gemma":[0.00009625329,0.00008511852,0.00020474942,0.000058250534,0.00025782298,0.00018930741,0.0002399045,0.00052135694,0.00027150073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041607098,0.000093153925,0.0001025941,0.00016177334,0.000017253944,0.00019641519,0.00002107799,0.00018733543,0.9900029,0.0005856908,0.00049100525,0.0077248025],"study_design_scores_gemma":[0.00020154724,0.002049406,0.0007962329,0.000028272285,0.00006348694,0.0009879156,0.000035937068,0.0017461808,0.97772276,0.00021549122,0.016135532,0.0000173114],"about_ca_topic_score_codex":0.00023603835,"about_ca_topic_score_gemma":0.00040946636,"teacher_disagreement_score":0.0011227758,"about_ca_system_score_codex":0.00012659874,"about_ca_system_score_gemma":0.00023928795,"threshold_uncertainty_score":0.0037560463},"labels":[],"label_agreement":null},{"id":"W4387533606","doi":"10.3390/molecules28207023","title":"Naphthaleneoxypropargyl-Containing Piperazine as a Regulator of Effector Immune Cell Populations upon an Aseptic Inflammation","year":2023,"lang":"en","type":"article","venue":"Molecules","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lethbridge College","funders":"","keywords":"Inflammation; Immune system; Cytotoxic T cell; Chemistry; Cadmium chloride; Spleen; CD8; Immunology; Cadmium acetate; Biology; Cadmium; Biochemistry","score_opus":0.014594274046212668,"score_gpt":0.2607132808984264,"score_spread":0.24611900685221372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387533606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544156,0.0020665028,0.0017451732,0.000045724126,0.0000137540055,0.000019233645,0.00006747322,0.000025412128,0.0005751144],"genre_scores_gemma":[0.9961469,0.0010140203,0.0015215789,0.00004703427,0.000009024604,0.000016064563,0.000112349066,0.0000034484249,0.001129572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999954,0.000012014462,0.0000026775183,0.000009228708,0.000011091097,0.000011106211],"domain_scores_gemma":[0.9999589,0.0000062416525,0.000017631006,0.0000031013617,0.0000048747875,0.000009284864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000059341375,0.0002184617,0.00012047191,0.00005816472,0.00004558332,0.000075434284,0.000100129386,0.00014522654,0.0006423659],"category_scores_gemma":[0.00006771489,0.000060650767,0.0000838336,0.00004510533,0.00009028246,0.00011785029,0.00009909034,0.00020453654,0.00011605118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103426064,0.000008202718,0.000056520385,0.000033062253,0.0000019925478,0.000023839864,0.0000044945473,0.00003793644,0.99908245,0.0000137886545,0.000007895884,0.00062634813],"study_design_scores_gemma":[0.00001628417,0.0009394695,0.0026692264,0.0000058130145,0.000012643723,0.00019735395,0.000015440997,0.00041874967,0.9938309,0.000015310216,0.0018751521,0.0000036233505],"about_ca_topic_score_codex":0.00011809699,"about_ca_topic_score_gemma":0.00022036313,"teacher_disagreement_score":0.0006423659,"about_ca_system_score_codex":0.00006229773,"about_ca_system_score_gemma":0.00006446876,"threshold_uncertainty_score":0.0021489263},"labels":[],"label_agreement":null},{"id":"W4387805006","doi":"10.1124/molpharm.123.000740","title":"Synergy between Interleukin-1β, Interferon-γ, and Glucocorticoids to Induce TLR2 Expression Involves NF-κB, STAT1, and the Glucocorticoid Receptor","year":2023,"lang":"en","type":"article","venue":"Molecular Pharmacology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"TLR2; STAT1; STAT3; Janus kinase; Glucocorticoid receptor; Downregulation and upregulation; Glucocorticoid; Receptor; Signal transduction; Chemistry; Endocrinology; Biology; Internal medicine; Medicine; Cell biology; Innate immune system; Biochemistry","score_opus":0.010357507694317822,"score_gpt":0.2669979346571801,"score_spread":0.25664042696286227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387805006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9414268,0.029613933,0.013526235,0.0008909233,0.00059118966,0.00019287091,0.001992146,0.00048354428,0.0112823155],"genre_scores_gemma":[0.9871371,0.0047072433,0.0033379302,0.00027246054,0.00006418437,0.00011057717,0.00091698236,0.000020974509,0.003432585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996125,0.000079361875,0.000038330076,0.000073697374,0.00008870079,0.000107487554],"domain_scores_gemma":[0.99987376,0.000015829804,0.000039404422,0.000017552402,0.000018613418,0.00003481008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023284616,0.00073986023,0.00051408954,0.00024975467,0.00017617946,0.00039266248,0.00017262586,0.00029627586,0.0020861905],"category_scores_gemma":[0.000103093174,0.00020969186,0.0006520678,0.00016941545,0.00021237036,0.00021106933,0.00030551257,0.0006928266,0.00073379383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032249867,0.000058074653,0.00046862775,0.00018025647,0.00002140387,0.000061875646,0.00001327026,0.000095221214,0.9945135,0.00011240503,0.00015549663,0.003997336],"study_design_scores_gemma":[0.00009371919,0.0013641479,0.013292392,0.00003967003,0.000069334186,0.0004926011,0.00008492166,0.0008785445,0.97527677,0.00020983125,0.008180884,0.000017200444],"about_ca_topic_score_codex":0.00033915156,"about_ca_topic_score_gemma":0.0008907796,"teacher_disagreement_score":0.0020861905,"about_ca_system_score_codex":0.0003026994,"about_ca_system_score_gemma":0.00037648997,"threshold_uncertainty_score":0.0069789886},"labels":[],"label_agreement":null},{"id":"W4387888500","doi":"10.1186/s12885-023-11509-7","title":"Toll-like receptor 9 (-1237 T/C, -1486 T/C) and the risk of gastric cancer: a meta-analysis of genetic association studies","year":2023,"lang":"en","type":"review","venue":"BMC Cancer","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"International Medical University","keywords":"Medicine; Odds ratio; Meta-analysis; Internal medicine; Confidence interval; Cancer; Surgical oncology; Case-control study; Oncology; Demography","score_opus":0.11959231558070518,"score_gpt":0.36954480042273247,"score_spread":0.24995248484202728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387888500","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030194633,0.96122116,0.0050069895,0.00065023964,0.00046381357,0.0006996133,0.0012150931,0.00010972307,0.00043868326],"genre_scores_gemma":[0.6319269,0.34722713,0.013338428,0.0012589779,0.00054138334,0.0026457638,0.0021715981,0.0001254502,0.0007643825],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.97989,0.011671517,0.0039743315,0.0023985791,0.0015423925,0.00052321726],"domain_scores_gemma":[0.9783844,0.016022233,0.002402234,0.0012488563,0.0015479875,0.00039431403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02461638,0.0042043454,0.017821074,0.0087067,0.0011212218,0.004563925,0.002934243,0.0027193541,0.0030528784],"category_scores_gemma":[0.036907617,0.002110745,0.06995772,0.010161132,0.0008472052,0.0019390122,0.0022917597,0.0025966712,0.00033505453],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020970048,0.00003383198,0.0084630195,0.035936896,0.9486326,0.0001556007,0.000046346897,0.00073870516,0.00029166063,0.00008092175,0.00026413548,0.0032592267],"study_design_scores_gemma":[0.00032390805,0.00011336644,0.0029037492,0.0017971756,0.99383885,0.000058633737,0.000022564742,0.00034267313,0.000084719315,0.00015916202,0.00034139675,0.000013925658],"about_ca_topic_score_codex":0.0063830265,"about_ca_topic_score_gemma":0.009689415,"teacher_disagreement_score":0.02461638,"about_ca_system_score_codex":0.002415882,"about_ca_system_score_gemma":0.0033969192,"threshold_uncertainty_score":0.13018537},"labels":[],"label_agreement":null},{"id":"W4388210594","doi":"10.1159/000534107","title":"Endotoxemia Correlates with Kidney Function and Length of Stay in Critically Ill Patients","year":2023,"lang":"en","type":"article","venue":"Blood Purification","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iridian Spectral Technologies (Canada)","funders":"","keywords":"Critically ill; Medicine; Intensive care medicine; Renal function; Critical illness; Acute kidney injury; Kidney disease; Internal medicine","score_opus":0.005735671831884961,"score_gpt":0.19925991690775094,"score_spread":0.193524245075866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388210594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9992681,0.00022937583,0.000042464228,0.000077606426,0.000006400619,0.0000042294982,0.00014487263,0.0000019362042,0.00022496097],"genre_scores_gemma":[0.9996146,0.000074964184,0.00005524313,0.000029928975,0.0000132756595,0.0000057999055,0.00015060068,6.727902e-7,0.000054890435],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996431,0.000086663655,0.000054615983,0.0000735707,0.00007419694,0.00006784039],"domain_scores_gemma":[0.9976968,0.00025862048,0.0012829977,0.00006838345,0.00020062362,0.00049259106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052608276,0.00023572934,0.0003398873,0.00040448763,0.00038596755,0.00058885146,0.00025648405,0.00035389615,0.0022820972],"category_scores_gemma":[0.0021566984,0.0001465714,0.0002467146,0.00067481596,0.00024407964,0.0004440748,0.00041941993,0.0007526012,0.00020910568],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053724136,0.000015382788,0.99946874,0.0000037662967,0.0000124007975,0.000024638373,0.0000109556,0.000011540794,0.00009923717,0.0000041080566,0.000036788493,0.0002587341],"study_design_scores_gemma":[0.000003445026,0.00006888831,0.99951184,0.000005670849,0.000011457638,0.00014064195,0.000057832236,0.00010250115,0.000031210562,0.000011713787,0.000053185417,0.0000017402989],"about_ca_topic_score_codex":0.0014415893,"about_ca_topic_score_gemma":0.0016763159,"teacher_disagreement_score":0.0022820972,"about_ca_system_score_codex":0.0002886524,"about_ca_system_score_gemma":0.00047060387,"threshold_uncertainty_score":0.0076343417},"labels":[],"label_agreement":null},{"id":"W4388234844","doi":"","title":"Toll-like Interleukin -1 Receptor Regulator (TILRR) Protein, a Major Modulator of Inflammation, is Expressed in Normal Human and Macaque Tissues and PBMCs","year":2022,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Regulator; Inflammation; Toll-like receptor; Toll; Receptor; Interleukin-1 receptor; Immunology; Cell biology; Macaque; Biology; Interleukin; Immune system; Neuroscience; Gene; Cytokine; Innate immune system; Biochemistry","score_opus":0.07162644937230792,"score_gpt":0.44160788576396376,"score_spread":0.3699814363916558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388234844","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9845418,0.00838283,0.0031977745,0.00017034683,0.00006553509,0.00007865261,0.0014982123,0.0000837283,0.0019812242],"genre_scores_gemma":[0.9902996,0.0019355266,0.0029692752,0.00016986005,0.000034294793,0.00014161269,0.0017426427,0.000013606212,0.0026935244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999694,0.00004542769,0.000032593027,0.00009355391,0.000054877735,0.00007968566],"domain_scores_gemma":[0.9998771,0.000023905177,0.000032485743,0.000018801862,0.000027415392,0.00002021787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023456594,0.00017366961,0.00015080851,0.00040401306,0.0002698517,0.00045204168,0.000117881194,0.00023785583,0.0019734136],"category_scores_gemma":[0.0002350045,0.0001033971,0.0001982167,0.0002457155,0.00023950479,0.0001674516,0.0002090728,0.00029142536,0.00046566426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003980148,0.000027924138,0.004796872,0.00014969446,0.000012041148,0.00029254382,0.00013852847,0.000021939406,0.9906013,0.00007972451,0.0001816361,0.0032997814],"study_design_scores_gemma":[0.00009661817,0.001863662,0.26768097,0.00012497956,0.00013199226,0.010363443,0.001965298,0.00084550487,0.6839205,0.0003164639,0.032655466,0.000035023768],"about_ca_topic_score_codex":0.0013073662,"about_ca_topic_score_gemma":0.0015252815,"teacher_disagreement_score":0.0019734136,"about_ca_system_score_codex":0.00019974969,"about_ca_system_score_gemma":0.00017912923,"threshold_uncertainty_score":0.006601751},"labels":[],"label_agreement":null},{"id":"W4388290310","doi":"10.1016/j.vaccine.2023.10.059","title":"In ovo administration of retinoic acid enhances cell-mediated immune responses against an inactivated H9N2 avian influenza virus vaccine","year":2023,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Animal Health Institute; University of Guelph","funders":"","keywords":"In ovo; Virology; Biology; Virus; Inactivated vaccine; Vaccination; Immune system; Adjuvant; Influenza A virus subtype H5N1; Population; Antibody; Immunogenicity; Immunity; Influenza A virus; Microbiology; Immunology; Medicine; Embryo","score_opus":0.013583778890807663,"score_gpt":0.27376649719119295,"score_spread":0.2601827183003853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388290310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9947465,0.0015222435,0.0010027696,0.00031437303,0.00026965945,0.000071730174,0.00023539997,0.00006206303,0.0017752687],"genre_scores_gemma":[0.9918777,0.0010192047,0.0016322834,0.00015616705,0.00014118732,0.000075022785,0.00032216552,0.000029349749,0.004746978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996526,0.00009378085,0.00002209604,0.00006654918,0.000039063118,0.00012587992],"domain_scores_gemma":[0.99945265,0.00020723301,0.00010841476,0.00006982814,0.000032576485,0.00012933678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043058684,0.0004915876,0.00070489984,0.0005508741,0.00031972502,0.00067708973,0.00028950596,0.0007257025,0.002178733],"category_scores_gemma":[0.00046930095,0.00026579254,0.0003639509,0.00016993705,0.00076300575,0.00053460675,0.00023528452,0.0018138784,0.0004479858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013763529,0.000926962,0.00058639573,0.00009045266,0.000023740196,0.00015361854,0.000096217045,0.00019687744,0.97824025,0.00014170329,0.00015136503,0.0056287576],"study_design_scores_gemma":[0.0007704078,0.023494441,0.0052637197,0.000036990084,0.00013871209,0.00028637596,0.00049032597,0.0012576508,0.9637601,0.0002323039,0.0042471346,0.000021903234],"about_ca_topic_score_codex":0.0008312759,"about_ca_topic_score_gemma":0.001793885,"teacher_disagreement_score":0.002178733,"about_ca_system_score_codex":0.0002829201,"about_ca_system_score_gemma":0.00050329027,"threshold_uncertainty_score":0.007288575},"labels":[],"label_agreement":null},{"id":"W4388528807","doi":"10.1093/jas/skad281.601","title":"PSX-9 Gonadectomy Is Not Correlated with Altered T-Lymphocyte Populations in Senior Labrador Retrievers","year":2023,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"CD8; Lymphocyte; CD3; Flow cytometry; Andrology; Biology; Immunology; Medicine; Immune system","score_opus":0.030507895827981947,"score_gpt":0.28965462027368055,"score_spread":0.2591467244456986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388528807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99943346,0.00009567248,0.000046143632,0.0000072051002,0.0000030381898,0.0000036361641,0.00015840838,0.000004369472,0.00024796935],"genre_scores_gemma":[0.99825066,0.00009815077,0.000068486566,0.000033100037,0.00000620581,0.000009509501,0.00051125267,0.0000080775235,0.001014433],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999821,0.000013370961,0.000019318706,0.000058770267,0.000049889524,0.00003758801],"domain_scores_gemma":[0.9995858,0.000027913073,0.00023544686,0.00004425772,0.000022580994,0.00008398455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001502814,0.00019813432,0.00028598652,0.00058255455,0.00014460554,0.00030731354,0.00015919658,0.00020882214,0.0024923033],"category_scores_gemma":[0.0003217692,0.00011107317,0.00015544902,0.00023637254,0.0002557532,0.00016910267,0.00015763621,0.0002340856,0.000523896],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031519732,0.00029455524,0.35602325,0.000067861576,0.00011487217,0.0014099091,0.00026094244,0.00008495529,0.6308347,0.00005568837,0.00024561607,0.0074556316],"study_design_scores_gemma":[0.000010678005,0.00086409075,0.9896346,0.000005033006,0.000024091223,0.0011968936,0.00011958463,0.00006874421,0.007661022,0.000010635909,0.00040006795,0.000004549935],"about_ca_topic_score_codex":0.0011427336,"about_ca_topic_score_gemma":0.0017098619,"teacher_disagreement_score":0.0024923033,"about_ca_system_score_codex":0.00014101857,"about_ca_system_score_gemma":0.00007609529,"threshold_uncertainty_score":0.008337617},"labels":[],"label_agreement":null},{"id":"W4389163312","doi":"10.1101/2023.11.30.23299243","title":"Multi-Omic blood analysis reveals differences in innate inflammatory sensitivity between species","year":2023,"lang":"en","type":"preprint","venue":"medRxiv","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Pacific Northwest National Laboratory; Biological and Environmental Research; Advanced Research Projects Agency; National Institutes of Health; Open Medicine Foundation; National Institute of General Medical Sciences; Battelle; U.S. Department of Energy","keywords":"Lipopolysaccharide; Transcriptome; Biology; Sepsis; Inflammation; Innate immune system; Gene; Autophagy; Baboon; Proteome; Apoptosis; Cell biology; Immunology; Gene expression; Microbiology; Genetics; Ecology; Immune system","score_opus":0.047338194274185105,"score_gpt":0.2671219796073644,"score_spread":0.21978378533317927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389163312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9570813,0.007090325,0.014645401,0.0005783214,0.00012672374,0.000038247534,0.017117955,0.0004644424,0.0028572783],"genre_scores_gemma":[0.93897444,0.0031197062,0.030757748,0.00072236534,0.00014008592,0.000098988734,0.023719959,0.0004247482,0.002042003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995271,0.000061856765,0.00003121669,0.00020925811,0.00009949999,0.00007104016],"domain_scores_gemma":[0.9995395,0.00012896975,0.00015288015,0.00006991177,0.00005322225,0.000055523975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068219524,0.00045701218,0.00085165247,0.0015985736,0.00055970857,0.0013854549,0.00025962145,0.00054635305,0.0016348353],"category_scores_gemma":[0.00078241515,0.00022311196,0.00054468395,0.0013276492,0.00044757157,0.00055174006,0.0009665526,0.0006781627,0.00061938923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064028474,0.000034460434,0.034749303,0.0004703661,0.00031981323,0.000252518,0.00031601166,0.00019508727,0.9444229,0.00035623976,0.00088354276,0.017359441],"study_design_scores_gemma":[0.00003266628,0.00039108485,0.86475325,0.00013496983,0.0005283489,0.0020850033,0.0007838457,0.0027140714,0.10226552,0.003605446,0.022639403,0.000066371365],"about_ca_topic_score_codex":0.00040233677,"about_ca_topic_score_gemma":0.0006986637,"teacher_disagreement_score":0.0016348353,"about_ca_system_score_codex":0.0001690253,"about_ca_system_score_gemma":0.00023857287,"threshold_uncertainty_score":0.005469084},"labels":[],"label_agreement":null},{"id":"W4389167209","doi":"","title":"No genetic relationship between TLR2 rs4696480, rs3804100, and rs3804099 gene polymorphisms and female breast cancer in Saudi populations","year":2017,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Breast cancer; Biology; Genetics; Gene; Oncology; Medicine; Gynecology; Cancer","score_opus":0.21868442424893259,"score_gpt":0.5013713985613433,"score_spread":0.2826869743124107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389167209","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967367,0.0017649516,0.00013935815,0.0001960587,0.000021687782,0.000006490408,0.0004238621,0.0000034778272,0.00070736214],"genre_scores_gemma":[0.9986212,0.00041662142,0.00010178976,0.000078928824,0.000018174034,0.000007982163,0.0003402598,0.000003737584,0.00041131704],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997553,0.000045140172,0.000036380345,0.00008871863,0.000036046004,0.00003851423],"domain_scores_gemma":[0.99947506,0.0001620171,0.00018105851,0.000055838464,0.00006904771,0.000056931905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034330622,0.00030231208,0.0002474725,0.0004064012,0.00034288527,0.0003804617,0.00032097872,0.0004063685,0.004086556],"category_scores_gemma":[0.0014299952,0.00021576686,0.0005643656,0.00066988525,0.00018703456,0.00022652656,0.00025030487,0.00037140012,0.000266076],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010076964,0.00004690182,0.9855758,0.00010553856,0.00040644858,0.00040001553,0.00032161805,0.000110585526,0.0022907432,0.00014493863,0.0006616425,0.008928142],"study_design_scores_gemma":[0.00004966883,0.00014547518,0.9944095,0.000057600755,0.00044968116,0.0015451674,0.00037706736,0.0005600326,0.00035451617,0.00023239905,0.0018055881,0.000013227532],"about_ca_topic_score_codex":0.008772671,"about_ca_topic_score_gemma":0.008350356,"teacher_disagreement_score":0.008772671,"about_ca_system_score_codex":0.00019899046,"about_ca_system_score_gemma":0.00024253187,"threshold_uncertainty_score":0.01744324},"labels":[],"label_agreement":null},{"id":"W4389307459","doi":"10.1038/s41577-023-00975-6","title":"Neonatal monocytes suppress adult TH17 cell responses in skin","year":2023,"lang":"en","type":"review","venue":"Nature reviews. Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Disability Prevention and Rehabilitation; University of Toronto","funders":"","keywords":"Immunology; Medicine; Monocyte; Cell; Cell biology; Biology; Genetics","score_opus":0.026937967246376874,"score_gpt":0.32766541306617986,"score_spread":0.300727445819803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389307459","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008877258,0.99751955,0.00014073907,0.00044328082,0.000848796,0.000005047197,0.000031889263,0.0000128423,0.0009090797],"genre_scores_gemma":[0.00049874,0.9969048,0.00012755151,0.0004505444,0.00060070894,0.000011424091,0.00005382782,0.0000030460014,0.0013493014],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983,0.000023212433,0.00002217757,0.000023742514,0.000078385834,0.000022413798],"domain_scores_gemma":[0.99958736,0.00014466634,0.000046785102,0.000015363117,0.00013913197,0.000066650195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007560473,0.0012921023,0.0013636813,0.0010545051,0.00020137036,0.0010307811,0.0010567135,0.0011120288,0.0039586173],"category_scores_gemma":[0.0006626172,0.00030277416,0.00032979032,0.0010651097,0.00055131456,0.0011146049,0.00084045355,0.0026092627,0.004276718],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002488421,0.000048109574,0.00010791774,0.006820361,0.000050197756,0.00013464411,0.00001994736,0.0002316647,0.003805741,0.0032834583,0.078796364,0.90645283],"study_design_scores_gemma":[0.00005367217,0.0000964249,0.00070136826,0.0016835431,0.000055188695,0.00045731835,0.000021967751,0.0000555901,0.0008884065,0.001579234,0.994391,0.000016226482],"about_ca_topic_score_codex":0.00065154635,"about_ca_topic_score_gemma":0.0014009204,"teacher_disagreement_score":0.0039586173,"about_ca_system_score_codex":0.0005414253,"about_ca_system_score_gemma":0.00074609515,"threshold_uncertainty_score":0.0132429},"labels":[],"label_agreement":null},{"id":"W4389615151","doi":"10.1084/jem.20230063","title":"Commensal bacteria promote type I interferon signaling to maintain immune tolerance in mice","year":2023,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"Center for Comparative Immigration Studies, University of California, San Diego; Chiba University; University of California, San Diego; National Institute of Diabetes and Digestive and Kidney Diseases; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Hartwell Foundation; Howard Hughes Medical Institute; National Institute of Allergy and Infectious Diseases; Japan Agency for Medical Research and Development; National Academies of Sciences, Engineering, and Medicine; Canadian Institute for Advanced Research; Ford Foundation","keywords":"Biology; Immune system; Bacteroides fragilis; FOXP3; Immunology; Signal transduction; Immune tolerance; Interferon; Microbiology; Cell biology; Antibiotics","score_opus":0.019488951890504706,"score_gpt":0.2968835369182332,"score_spread":0.2773945850277285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389615151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99129933,0.0013462492,0.0032418407,0.00041994508,0.000072443974,0.00006759428,0.00067981065,0.00037489063,0.0024979627],"genre_scores_gemma":[0.98962283,0.0007659594,0.0039634826,0.0003090031,0.000037817685,0.00011701577,0.00044061543,0.00010328841,0.004639969],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99956256,0.00007463664,0.000038406717,0.000084668565,0.00008775905,0.00015211142],"domain_scores_gemma":[0.9995474,0.000033967233,0.00015577643,0.00005732597,0.00002279587,0.00018278109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040816705,0.0007000363,0.00036006962,0.00094062736,0.00031664968,0.00053483585,0.0003605361,0.00064959546,0.0018568822],"category_scores_gemma":[0.00018834615,0.00040043754,0.00042424517,0.00025268615,0.00065875996,0.00042282217,0.00037929832,0.0021098554,0.0006460817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068101817,0.00025418878,0.0003325925,0.000035509667,0.000007401658,0.00006850643,0.000032033353,0.0000853507,0.9961965,0.000296468,0.00009413816,0.0019163423],"study_design_scores_gemma":[0.00021751458,0.0022561655,0.010750786,0.000058641323,0.00003881977,0.0006036431,0.00011583863,0.002709058,0.9784565,0.0005684292,0.0042057107,0.00001876473],"about_ca_topic_score_codex":0.0004326094,"about_ca_topic_score_gemma":0.0008774528,"teacher_disagreement_score":0.0018568822,"about_ca_system_score_codex":0.00056214543,"about_ca_system_score_gemma":0.00044720288,"threshold_uncertainty_score":0.0062119365},"labels":[],"label_agreement":null},{"id":"W4390080811","doi":"10.1101/2023.12.20.572362","title":"Attenuating ABHD17 isoforms augments the <i>S</i> -acylation and function of NOD2 and a subset of Crohn’s disease-associated NOD2 variants","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Dalhousie University; St. Michael's Hospital","funders":"National Institutes of Health; Canadian Institutes of Health Research; Coventry University; Kenneth Rainin Foundation","keywords":"NOD2; Palmitoylation; Cell biology; Peptidoglycan; Endosome; Signal transduction; Biology; Chemistry; Biochemistry; Intracellular; Innate immune system; Receptor; Enzyme","score_opus":0.015054221957062004,"score_gpt":0.21141515508908898,"score_spread":0.196360933132027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390080811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99860805,0.0002494631,0.00059678045,0.000034849432,0.000015424412,0.000011079211,0.00016458766,0.000028036084,0.00029170228],"genre_scores_gemma":[0.9970535,0.00019504031,0.0008784531,0.00004438682,0.0000069613,0.00002430822,0.00039325873,0.000023723525,0.0013802929],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999843,0.000027753142,0.000021579093,0.000028466618,0.000031165186,0.000048024063],"domain_scores_gemma":[0.9998053,0.000030720996,0.000055684322,0.00001932382,0.000018648301,0.000070398564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016300165,0.00029845684,0.0002540951,0.00017072767,0.00010491279,0.0002513329,0.00013203568,0.00017559247,0.0014813634],"category_scores_gemma":[0.00011152039,0.000114022536,0.0002213153,0.0001100521,0.00021660683,0.00010581866,0.00015187915,0.00047706673,0.00031745672],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020946003,0.00003343596,0.00039450792,0.000014901143,0.0000043275354,0.000051071693,0.0000063534203,0.00003266466,0.99877554,0.000023260243,0.000024361165,0.0004301638],"study_design_scores_gemma":[0.000034710436,0.0006074433,0.010060267,0.0000055741248,0.000025525544,0.0005401149,0.0000543042,0.0008392712,0.98575413,0.000028620861,0.0020456447,0.0000045698007],"about_ca_topic_score_codex":0.000427672,"about_ca_topic_score_gemma":0.0005901817,"teacher_disagreement_score":0.0014813634,"about_ca_system_score_codex":0.00020356123,"about_ca_system_score_gemma":0.00013477643,"threshold_uncertainty_score":0.0049556494},"labels":[],"label_agreement":null},{"id":"W4391014716","doi":"10.1159/000535523","title":"TLR10: An intriguing Toll-like receptor with many unanswered questions","year":2024,"lang":"en","type":"article","venue":"Journal of Innate Immunity","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Toll; Innate immune system; Receptor; Biology; Pattern recognition receptor; Toll-like receptor; TLR9; Function (biology); Signalling; Immune system; Immunology; Cell biology; Genetics; Gene","score_opus":0.010383871042195,"score_gpt":0.256791274478578,"score_spread":0.246407403436383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391014716","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004405466,0.9559458,0.0026456462,0.024753205,0.008526859,0.000021646101,0.0002320509,0.00006449243,0.003404798],"genre_scores_gemma":[0.026682029,0.93868613,0.0027297803,0.011500281,0.012397742,0.000041311734,0.00063918665,0.000025423888,0.007298133],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99975735,0.000057011726,0.000025540881,0.000053681004,0.000054981687,0.00005150222],"domain_scores_gemma":[0.99966,0.00009293396,0.00004357954,0.0000111767495,0.00011685045,0.00007532807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090369955,0.00068321975,0.00079965335,0.000593994,0.0004907292,0.0017796431,0.00065582135,0.0019491563,0.0054421807],"category_scores_gemma":[0.00053948426,0.00017965057,0.00045785352,0.00069444306,0.00096914516,0.0035295933,0.0005928198,0.0025288754,0.002585444],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015094059,0.00016453052,0.0025785374,0.018945644,0.00017456601,0.0034600007,0.0005579383,0.0006156317,0.07650856,0.041348297,0.12051864,0.73361826],"study_design_scores_gemma":[0.000041983545,0.00042213657,0.0022481692,0.0024705818,0.00013631239,0.007068962,0.0011338239,0.0003632776,0.0070724515,0.025413232,0.9535618,0.00006738222],"about_ca_topic_score_codex":0.00025812254,"about_ca_topic_score_gemma":0.0002529853,"teacher_disagreement_score":0.0054421807,"about_ca_system_score_codex":0.00044346927,"about_ca_system_score_gemma":0.0011225331,"threshold_uncertainty_score":0.018205881},"labels":[],"label_agreement":null},{"id":"W4391145773","doi":"10.1101/2024.01.18.576322","title":"Extracellular RNA induce neutrophil recruitment via endothelial TLR3 during venous thrombosis after vascular injury","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Région Bretagne","keywords":"TLR3; Neutrophil extracellular traps; Thrombus; Medicine; Inflammation; Immunology; Platelet activation; Coagulation; Cell biology; Platelet; Innate immune system; Biology; Toll-like receptor; Internal medicine; Immune system","score_opus":0.016123562023602003,"score_gpt":0.22671888059269152,"score_spread":0.21059531856908953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391145773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901334,0.0030967526,0.003928659,0.00023192685,0.00007935439,0.000057953854,0.00067638356,0.00010455876,0.001691104],"genre_scores_gemma":[0.9946622,0.0008192177,0.0017218775,0.0001894706,0.000023223156,0.00009208582,0.0006189104,0.000009409222,0.0018636632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99972194,0.000075660544,0.000024652516,0.000038116275,0.00005017883,0.00008937677],"domain_scores_gemma":[0.9998975,0.0000138385585,0.000036485275,0.0000108266395,0.000015976262,0.000025410925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019492721,0.00024146405,0.00027684672,0.00022028583,0.00011841725,0.00028000987,0.000121113946,0.00034639394,0.002299037],"category_scores_gemma":[0.00016057429,0.00012645987,0.0003620897,0.00011719102,0.00016253929,0.00016855662,0.00019515019,0.0006943065,0.00044399124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006572342,0.00009117425,0.00043932916,0.00011197622,0.000011822055,0.000111161935,0.000020559066,0.000062945546,0.99620324,0.00010408545,0.0002149936,0.0019714667],"study_design_scores_gemma":[0.0001518646,0.0020756242,0.022188079,0.00004367811,0.000053385193,0.0010695959,0.00013747394,0.0027649046,0.96803176,0.00028240253,0.003187794,0.000013409719],"about_ca_topic_score_codex":0.00020536434,"about_ca_topic_score_gemma":0.00029603302,"teacher_disagreement_score":0.002299037,"about_ca_system_score_codex":0.0002276388,"about_ca_system_score_gemma":0.00014816786,"threshold_uncertainty_score":0.0076910853},"labels":[],"label_agreement":null},{"id":"W4392337524","doi":"10.2460/ajvr.23.10.0246","title":"Splenic gene expression of cytokines at multiple time points following lipopolysaccharide challenge in layers","year":2024,"lang":"en","type":"article","venue":"American Journal of Veterinary Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital; University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lipopolysaccharide; Tumor necrosis factor alpha; Saline; Spleen; Cytokine; Inflammation; Immune system; Internal medicine; Medicine; Endocrinology; Real-time polymerase chain reaction; Andrology; Gene expression; Interleukin 10; Interleukin; Immunology; Biology; Gene","score_opus":0.04903254706613325,"score_gpt":0.3509214981755156,"score_spread":0.30188895110938235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392337524","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9976851,0.000617812,0.0006563154,0.000024231906,0.000021530612,0.00003765516,0.00046704462,0.00002355245,0.00046685824],"genre_scores_gemma":[0.99444723,0.00063652225,0.0012202687,0.00007587956,0.000025715237,0.00012244513,0.00071378646,0.000013636227,0.0027444982],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998901,0.000009714023,0.000008142652,0.00003698714,0.000023348375,0.000031776053],"domain_scores_gemma":[0.9997011,0.000031165604,0.000115936484,0.000015289444,0.000044121472,0.00009237129],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000145176,0.00045291558,0.00027152122,0.00037640313,0.00013937801,0.0003412246,0.00008306371,0.000283422,0.0014391148],"category_scores_gemma":[0.00014268646,0.00018653765,0.00022512788,0.000180516,0.0002726613,0.0003107432,0.00014222733,0.00060951174,0.00037634],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009821123,0.00005635557,0.0018841744,0.000043100088,0.0000055425717,0.000046717203,0.00003983921,0.000025696678,0.9963325,0.000008835871,0.0000127591475,0.00056216866],"study_design_scores_gemma":[0.000066120774,0.0053103683,0.110327095,0.00002814448,0.00007500408,0.0002567084,0.00044671277,0.00049898133,0.8821349,0.000046006888,0.0007930495,0.000016977592],"about_ca_topic_score_codex":0.00028090162,"about_ca_topic_score_gemma":0.0005317321,"teacher_disagreement_score":0.0014391148,"about_ca_system_score_codex":0.00021174076,"about_ca_system_score_gemma":0.00015441932,"threshold_uncertainty_score":0.0048143268},"labels":[],"label_agreement":null},{"id":"W4392623957","doi":"10.1111/acel.14133","title":"Chronic TNF exposure induces glucocorticoid‐like immunosuppression in the alveolar macrophages of aged mice that enhances their susceptibility to pneumonia","year":2024,"lang":"en","type":"article","venue":"Aging Cell","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"National Heart, Lung, and Blood Institute; National Institute on Aging; American Heart Association; National Institute of General Medical Sciences; National Institute of Allergy and Infectious Diseases; Division of Intramural Research, National Institute of Allergy and Infectious Diseases","keywords":"Tumor necrosis factor alpha; Biology; Glucocorticoid; Immunology; Immune system; Alveolar macrophage; MAPK/ERK pathway; Macrophage; Internal medicine; Endocrinology; Kinase; Medicine; In vitro; Cell biology","score_opus":0.009936742011433382,"score_gpt":0.2423747033339444,"score_spread":0.23243796132251102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392623957","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960245,0.001156385,0.0015743088,0.00010034284,0.00004227205,0.00002028237,0.00051504874,0.000072711715,0.0004942103],"genre_scores_gemma":[0.99463767,0.0008095779,0.0015004212,0.00016647753,0.00003028426,0.00006028663,0.0005722466,0.000037359285,0.00218573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996867,0.00003948996,0.000053181226,0.000077236306,0.00006359207,0.00007973191],"domain_scores_gemma":[0.9995639,0.000021434867,0.00016629657,0.000048344962,0.000033247576,0.00016668794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025444516,0.00045925513,0.00039830344,0.00045524753,0.00015351071,0.0003059253,0.000202232,0.00038166047,0.0010514696],"category_scores_gemma":[0.00014870244,0.00031681,0.0003861348,0.00015424656,0.0002778807,0.00028985838,0.00023034874,0.0008574255,0.00044594667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019322407,0.000033229793,0.0005376667,0.000013818449,0.000005554755,0.000059360667,0.0000205919,0.000015375907,0.99852824,0.00002465085,0.000018261326,0.00054999185],"study_design_scores_gemma":[0.00008153847,0.0027785506,0.09329464,0.000026240748,0.00007741604,0.001517613,0.00022041604,0.0010013076,0.8978716,0.0001840044,0.0029212222,0.000025492827],"about_ca_topic_score_codex":0.0004690713,"about_ca_topic_score_gemma":0.0006585842,"teacher_disagreement_score":0.0010514696,"about_ca_system_score_codex":0.00026827047,"about_ca_system_score_gemma":0.00016006494,"threshold_uncertainty_score":0.003517449},"labels":[],"label_agreement":null},{"id":"W4393352893","doi":"10.3390/ijms25073927","title":"Diversity, Complexity, and Specificity of Bacterial Lipopolysaccharide (LPS) Structures Impacting Their Detection and Quantification","year":2024,"lang":"en","type":"article","venue":"International Journal of Molecular Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; University of Alberta","keywords":"Lipid A; Lipopolysaccharide; Bacteria; Glycolipid; Biochemistry; Bacterial outer membrane; Biology; Gram-negative bacteria; Chemistry; Polysaccharide; Toxicity; Microbiology; Gene; Escherichia coli; Genetics","score_opus":0.0325497976034254,"score_gpt":0.28502083427224817,"score_spread":0.25247103666882276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393352893","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9738166,0.0049887793,0.018346347,0.00018846839,0.00004690101,0.00007169141,0.0007546022,0.000114004084,0.0016726325],"genre_scores_gemma":[0.9688365,0.0038765,0.024129558,0.00020139702,0.00003349039,0.00009074887,0.0018109975,0.00005770534,0.0009629543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985245,0.00040368218,0.00013456207,0.00028797935,0.00048116618,0.00016820885],"domain_scores_gemma":[0.99938273,0.00018969903,0.00017316794,0.00005714471,0.0001397545,0.000057404162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071803766,0.00063690497,0.00038632867,0.000727411,0.00032661072,0.0009214599,0.00023330664,0.00047750052,0.00068944664],"category_scores_gemma":[0.0010521936,0.0002730531,0.00036768365,0.00060169824,0.0005204796,0.0006443534,0.0006474689,0.00072510313,0.0003645906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067756504,0.000019663676,0.001496441,0.00009494565,0.000014181257,0.000044340424,0.000031886782,0.00009136226,0.9951578,0.00004386436,0.000023707478,0.002914004],"study_design_scores_gemma":[0.0000043379737,0.00020076109,0.01437484,0.000036931757,0.00004221075,0.00048543268,0.000115447256,0.0011402476,0.9816814,0.00020331249,0.0016922676,0.000022859309],"about_ca_topic_score_codex":0.00020826679,"about_ca_topic_score_gemma":0.00029190446,"teacher_disagreement_score":0.0009214599,"about_ca_system_score_codex":0.00018642652,"about_ca_system_score_gemma":0.0002048459,"threshold_uncertainty_score":0.003797412},"labels":[],"label_agreement":null},{"id":"W4393841145","doi":"10.5281/zenodo.5655778","title":"Supplemental materials for Glucocorticoid production in lymphoid organs: Acute effects of lipopolysaccharide in neonatal and adult mice","year":2021,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Lipopolysaccharide; Glucocorticoid; Production (economics); Medicine; Immunology; Endocrinology; Internal medicine; Biology","score_opus":0.00780857195658949,"score_gpt":0.22739021927934616,"score_spread":0.21958164732275667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393841145","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0357779,0.0049096528,0.04931957,0.0033159852,0.0044084657,0.0047264956,0.83942664,0.015545721,0.04256961],"genre_scores_gemma":[0.07178142,0.008584935,0.065536074,0.00350738,0.00115646,0.01704794,0.69459116,0.0029051546,0.13488945],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9993048,0.00010440512,0.00009134261,0.00012158328,0.00024730878,0.00013061211],"domain_scores_gemma":[0.9988097,0.00020456318,0.00015656158,0.00020609802,0.00028486588,0.00033825365],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008846818,0.0015692888,0.0012478651,0.0024200883,0.001015006,0.00062535057,0.0020688982,0.0015743641,0.3233773],"category_scores_gemma":[0.0007733145,0.0011519447,0.0015000419,0.0014727756,0.00029499226,0.000544658,0.0006670557,0.00228592,0.05780922],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005236718,0.0024447395,0.0021816515,0.0032561247,0.00017907593,0.0008241189,0.00014594092,0.0007119178,0.5168584,0.003398797,0.4156055,0.049157012],"study_design_scores_gemma":[0.0014941811,0.0035040113,0.028289387,0.00063215615,0.00023680323,0.0019193497,0.0001520863,0.0012656429,0.14255613,0.0018321665,0.81795675,0.00016127215],"about_ca_topic_score_codex":0.0020659892,"about_ca_topic_score_gemma":0.0047375336,"teacher_disagreement_score":0.3233773,"about_ca_system_score_codex":0.00083006243,"about_ca_system_score_gemma":0.0010381028,"threshold_uncertainty_score":0.96512014},"labels":[],"label_agreement":null},{"id":"W4394057510","doi":"10.5281/zenodo.5655777","title":"Supplemental materials for Glucocorticoid production in lymphoid organs: Acute effects of lipopolysaccharide in neonatal and adult mice","year":2021,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Lipopolysaccharide; Glucocorticoid; Immunology; Medicine; Biology; Internal medicine; Endocrinology","score_opus":0.00780857195658949,"score_gpt":0.22739021927934616,"score_spread":0.21958164732275667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394057510","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0357779,0.0049096528,0.04931957,0.0033159852,0.0044084657,0.0047264956,0.83942664,0.015545721,0.04256961],"genre_scores_gemma":[0.07178142,0.008584935,0.065536074,0.00350738,0.00115646,0.01704794,0.69459116,0.0029051546,0.13488945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993048,0.00010440512,0.00009134261,0.00012158328,0.00024730878,0.00013061211],"domain_scores_gemma":[0.9988097,0.00020456318,0.00015656158,0.00020609802,0.00028486588,0.00033825365],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008846818,0.0015692888,0.0012478651,0.0024200883,0.001015006,0.00062535057,0.0020688982,0.0015743641,0.3233773],"category_scores_gemma":[0.0007733145,0.0011519447,0.0015000419,0.0014727756,0.00029499226,0.000544658,0.0006670557,0.00228592,0.05780922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005236718,0.0024447395,0.0021816515,0.0032561247,0.00017907593,0.0008241189,0.00014594092,0.0007119178,0.5168584,0.003398797,0.4156055,0.049157012],"study_design_scores_gemma":[0.0014941811,0.0035040113,0.028289387,0.00063215615,0.00023680323,0.0019193497,0.0001520863,0.0012656429,0.14255613,0.0018321665,0.81795675,0.00016127215],"about_ca_topic_score_codex":0.0020659892,"about_ca_topic_score_gemma":0.0047375336,"teacher_disagreement_score":0.3233773,"about_ca_system_score_codex":0.00083006243,"about_ca_system_score_gemma":0.0010381028,"threshold_uncertainty_score":0.96512014},"labels":[],"label_agreement":null},{"id":"W4394719172","doi":"10.1016/j.healun.2024.02.195","title":"Engraftment of Alveolar Macrophages from Human LT Recipients into Immunodeficient Mice as a Tool to Study Mechanisms of Lung Allograft Inflammation","year":2024,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Inflammation; Lung; Immunology; Human lung; Alveolar macrophage; Medicine; Macrophage; Pathology; Biology; Internal medicine; In vitro","score_opus":0.005796543958365118,"score_gpt":0.26479040129214104,"score_spread":0.25899385733377595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394719172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99059707,0.0015994774,0.005500963,0.00019200218,0.00011554597,0.00018099192,0.00036088223,0.000084914434,0.0013682335],"genre_scores_gemma":[0.99366874,0.00057928206,0.003151383,0.000121681,0.000049370068,0.00014875761,0.0003463073,0.000032439184,0.0019019857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964106,0.00008750294,0.00004032702,0.00006868066,0.00006683143,0.00009557607],"domain_scores_gemma":[0.99970824,0.00008539384,0.00005123833,0.00007667316,0.000021338505,0.00005712779],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067730487,0.00049108226,0.00047382317,0.0005164859,0.00033079955,0.0005993747,0.00027780308,0.00080186425,0.0014825255],"category_scores_gemma":[0.0002682907,0.00022458546,0.00038369265,0.00019355337,0.0004244929,0.00043299992,0.00033941437,0.0018010444,0.0004941033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00074975705,0.00023218837,0.00046023048,0.000029719911,0.000008399266,0.00021326421,0.00006606749,0.0000880414,0.9957124,0.00036696024,0.00003822053,0.0020346602],"study_design_scores_gemma":[0.00021173511,0.002770962,0.0048430106,0.000020061394,0.000065617125,0.00094921107,0.00010258046,0.0012830277,0.9871854,0.00022315812,0.0023358944,0.000009363035],"about_ca_topic_score_codex":0.00025382053,"about_ca_topic_score_gemma":0.0003845981,"teacher_disagreement_score":0.0014825255,"about_ca_system_score_codex":0.000115269235,"about_ca_system_score_gemma":0.0002297574,"threshold_uncertainty_score":0.0049595237},"labels":[],"label_agreement":null},{"id":"W4394770555","doi":"10.1089/vim.2024.0035","title":"Inflammatory Consequences and Immune Modulation","year":2024,"lang":"en","type":"editorial","venue":"Viral Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Immune system; Immune modulation; Biology; Psychology; Medicine; Immunology; Neuroscience","score_opus":0.005490172773741091,"score_gpt":0.23391169572034456,"score_spread":0.22842152294660348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394770555","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000045017525,0.017563114,0.000110442146,0.03244842,0.9482941,0.000013798733,0.000018554858,0.000029519835,0.0014770225],"genre_scores_gemma":[0.00043964485,0.006395932,0.00007316395,0.018388804,0.96918285,0.00001863983,0.000011799171,0.000014307446,0.0054749064],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99586475,0.0011112858,0.00044459375,0.00046757766,0.0017090039,0.00040271904],"domain_scores_gemma":[0.9905434,0.0041426094,0.0006590174,0.00039014276,0.0024535113,0.0018113259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006996663,0.00440793,0.003712602,0.0027699736,0.0028957976,0.0070404895,0.0034118935,0.019015195,0.011272588],"category_scores_gemma":[0.012568179,0.0013645614,0.0020119825,0.0010167204,0.0032086144,0.0050202208,0.0035887056,0.02471445,0.0069066836],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008532961,0.000016942578,0.00003474562,0.00030711998,0.000027255377,0.00022054541,0.00001976271,0.000025182811,0.00016109216,0.00083396013,0.98628855,0.0119793825],"study_design_scores_gemma":[0.00011405673,0.000047843892,0.00025408526,0.00038718167,0.00007052611,0.00038259165,0.000037948797,0.00013300292,0.00015532601,0.0021423881,0.99625623,0.000018768951],"about_ca_topic_score_codex":0.0011348644,"about_ca_topic_score_gemma":0.003496341,"teacher_disagreement_score":0.019015195,"about_ca_system_score_codex":0.0028360796,"about_ca_system_score_gemma":0.002104285,"threshold_uncertainty_score":0.037710547},"labels":[],"label_agreement":null},{"id":"W4395026182","doi":"10.1016/j.clim.2024.110075","title":"133 Looking for ALPS: 10 years experience of a combined assessment of serum FASL levels and circulating double negative T cells at the CHU Sainte-Justine","year":2024,"lang":"en","type":"article","venue":"Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Fas ligand; Medicine; Geography; Immunology; Biology; Apoptosis; Biochemistry","score_opus":0.051539861168669515,"score_gpt":0.3785220487235947,"score_spread":0.32698218755492514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395026182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97221667,0.004185676,0.0022809936,0.007358354,0.00071108225,0.00011942351,0.00026620942,0.00014917438,0.012712592],"genre_scores_gemma":[0.97682285,0.0026690955,0.0021690296,0.005148414,0.00060720794,0.000030429905,0.00046676685,0.00015404701,0.01193227],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9990024,0.00015777271,0.000073499425,0.00021683883,0.00014214264,0.00040729853],"domain_scores_gemma":[0.9981274,0.00021948759,0.00013199501,0.000068991496,0.000121914534,0.0013301485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070621003,0.001420681,0.00062273984,0.0008150556,0.0026561627,0.0013965206,0.0007881296,0.0028181847,0.00638767],"category_scores_gemma":[0.0021814196,0.00065450976,0.0016097364,0.0008268055,0.0010306112,0.0009989908,0.0017056331,0.0023625607,0.0026193187],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009801274,0.0051619317,0.22422415,0.00022772231,0.0002853332,0.6781616,0.0060879146,0.0008150815,0.0062720166,0.00083268364,0.011182197,0.065769345],"study_design_scores_gemma":[0.00019569244,0.0061938106,0.19086242,0.0004023321,0.00023873309,0.76567286,0.0047632125,0.0015210188,0.0039812634,0.0012652356,0.0246,0.00030340915],"about_ca_topic_score_codex":0.0047743134,"about_ca_topic_score_gemma":0.0081360405,"teacher_disagreement_score":0.00638767,"about_ca_system_score_codex":0.0013995396,"about_ca_system_score_gemma":0.0017771983,"threshold_uncertainty_score":0.02136892},"labels":[],"label_agreement":null},{"id":"W4395084375","doi":"10.1016/j.vetimm.2024.110758","title":"Resting and activated bovine neutrophils and eosinophils differ in their responses to adrenergic agonists","year":2024,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Global Institute for Water Security","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Eosinophil; Biology; Stimulation; Zymosan; Adrenergic receptor; Receptor; Agonist; Immunology; Immune system; Granulocyte; Endocrinology; Internal medicine; Innate immune system; Medicine; In vitro; Biochemistry","score_opus":0.01736719366849955,"score_gpt":0.25738561048121283,"score_spread":0.2400184168127133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395084375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99394965,0.0024357778,0.0017944617,0.00007355664,0.000018209897,0.000021452945,0.0002938116,0.000012904147,0.0014002096],"genre_scores_gemma":[0.9953245,0.0011613815,0.0012112582,0.00008817008,0.000009616118,0.000036360103,0.00042905475,0.0000063142215,0.0017332338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976355,0.000051832125,0.000025589316,0.00005134771,0.000048302903,0.00005932877],"domain_scores_gemma":[0.99989116,0.00003210598,0.00002757965,0.000008837839,0.00001680991,0.000023573708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019279322,0.00017451022,0.00014807534,0.00008788114,0.00009253533,0.00030790066,0.00011499093,0.0002170534,0.0009168836],"category_scores_gemma":[0.00019283974,0.00008641687,0.00011901393,0.000085865686,0.000115790644,0.0001555816,0.00012250882,0.0002638089,0.00023460107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022250164,0.000012815849,0.0011487368,0.000029557761,0.00000237002,0.0000449498,0.000029188088,0.000023915956,0.99718285,0.00003938144,0.00002175891,0.0012419611],"study_design_scores_gemma":[0.0000735878,0.001393949,0.18414506,0.00006091771,0.00006808382,0.0013943426,0.00043143562,0.0012064566,0.80293846,0.00018871382,0.008073631,0.000025433983],"about_ca_topic_score_codex":0.0010346575,"about_ca_topic_score_gemma":0.001435783,"teacher_disagreement_score":0.0010346575,"about_ca_system_score_codex":0.0001592368,"about_ca_system_score_gemma":0.00009285815,"threshold_uncertainty_score":0.0030673146},"labels":[],"label_agreement":null},{"id":"W4396977071","doi":"10.1084/jem.20231987","title":"γδ T cell profiling in a cohort of preterm infants reveals elevated frequencies of <i>CD83</i>+ γδ T cells in sepsis","year":2024,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Bundesministerium für Bildung und Forschung; Medizinischen Hochschule Hannover; Deutsche Forschungsgemeinschaft","keywords":"Sepsis; Flow cytometry; Immunology; Phenotype; Neonatal sepsis; T cell; Biology; CD86; Medicine; Immune system; Andrology; Gene; Genetics","score_opus":0.011866022283440327,"score_gpt":0.2741271531839664,"score_spread":0.2622611309005261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396977071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99899083,0.00020318045,0.0003069224,0.000019840592,0.0000030427407,0.000006731663,0.00024405477,0.000008481368,0.00021689423],"genre_scores_gemma":[0.99815375,0.0003142377,0.00048326395,0.000054991062,0.0000063757934,0.000028650209,0.00048529974,0.000009620333,0.00046370842],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997969,0.000029239276,0.00002072525,0.00007874919,0.000037122358,0.00003732755],"domain_scores_gemma":[0.9997602,0.000041287956,0.00006866488,0.000033531258,0.000043580167,0.00005274659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026066316,0.00021510072,0.0003152472,0.0005511417,0.00032690854,0.000537582,0.00019498597,0.0003680377,0.0008017485],"category_scores_gemma":[0.00074406265,0.00018846021,0.0002007437,0.00034299592,0.00020037404,0.00019982761,0.00036081462,0.00046924746,0.0002469928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007104115,0.000056309258,0.79672164,0.00007231347,0.000058410806,0.0014123411,0.0009928773,0.00022268746,0.18180466,0.00009075549,0.00031527595,0.017542247],"study_design_scores_gemma":[0.0000036262445,0.0002980476,0.98445636,0.000021094596,0.00004096219,0.0030817993,0.0007009793,0.00038795703,0.009907827,0.00009237461,0.0009991617,0.0000098084765],"about_ca_topic_score_codex":0.001287416,"about_ca_topic_score_gemma":0.00087074365,"teacher_disagreement_score":0.001287416,"about_ca_system_score_codex":0.00018323935,"about_ca_system_score_gemma":0.00015312053,"threshold_uncertainty_score":0.0026820898},"labels":[],"label_agreement":null},{"id":"W4398209976","doi":"10.1016/j.cyto.2024.156659","title":"Association of IL-1β gene polymorphisms rs1143627, rs1799916, and rs16944 with altered risk of triple-negative breast cancer","year":2024,"lang":"en","type":"article","venue":"Cytokine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Triple-negative breast cancer; Breast cancer; Genetics; Biology; Gene; Oncology; Medicine; Cancer","score_opus":0.005271759242037387,"score_gpt":0.21804517328348616,"score_spread":0.21277341404144878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398209976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972754,0.0010436749,0.00033972476,0.0001118827,0.00006079228,0.0000063900616,0.0005684975,0.000011273874,0.0005823149],"genre_scores_gemma":[0.9987696,0.00019590344,0.0001747517,0.000035128443,0.00003346706,0.000008345679,0.00024121185,0.0000071324766,0.0005344202],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997372,0.000063504616,0.000028324072,0.000081856786,0.000039483406,0.000049595554],"domain_scores_gemma":[0.9994081,0.0002077648,0.00019693054,0.00006020155,0.000043333523,0.00008361514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026444654,0.00052531966,0.00043527814,0.0005088026,0.00036320934,0.00039032806,0.0002716548,0.000606397,0.003892581],"category_scores_gemma":[0.0011668508,0.00021930924,0.0006768155,0.0007416169,0.00020785892,0.0001838922,0.0002056469,0.0007228856,0.0002786389],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006056281,0.00018762099,0.9468357,0.00013350458,0.002154206,0.0014108253,0.00027506426,0.000468938,0.03093421,0.00037454427,0.000959555,0.010209663],"study_design_scores_gemma":[0.00016884865,0.0003251832,0.99113464,0.00003065739,0.0010361613,0.0014985627,0.00017627225,0.0009620822,0.0021212155,0.0007630151,0.0017600998,0.000023205945],"about_ca_topic_score_codex":0.002384888,"about_ca_topic_score_gemma":0.0023819448,"teacher_disagreement_score":0.003892581,"about_ca_system_score_codex":0.00014393176,"about_ca_system_score_gemma":0.0002534433,"threshold_uncertainty_score":0.013021946},"labels":[],"label_agreement":null},{"id":"W4398243509","doi":"10.1089/derm.2023.0311","title":"Toll-Like Receptors and Contact Dermatitis","year":2024,"lang":"en","type":"review","venue":"Dermatitis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Toll; Contact dermatitis; Receptor; Dermatology; Immunology; Internal medicine; Allergy","score_opus":0.01779499266495228,"score_gpt":0.27532274012506397,"score_spread":0.2575277474601117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398243509","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016433657,0.99781525,0.00009342298,0.00016712537,0.00022298952,0.0000035235746,0.000017860144,0.000007133433,0.001508309],"genre_scores_gemma":[0.0022721987,0.99502075,0.00014006809,0.00022267994,0.00030534397,0.0000064041706,0.00005545073,0.000001650503,0.0019754858],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998504,0.00002692996,0.000016760338,0.000025634723,0.00005723932,0.000023044566],"domain_scores_gemma":[0.99989974,0.000035122644,0.00001953921,0.0000028913603,0.000029162577,0.000013504966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018401131,0.00069436803,0.0007326451,0.0011609929,0.00026626783,0.00092794665,0.00040537782,0.0008211507,0.005178327],"category_scores_gemma":[0.0003353717,0.00013199338,0.00035168443,0.0012165722,0.00029809002,0.00079251983,0.0005456429,0.0012562171,0.0026775608],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013692799,0.000084651845,0.0004434295,0.019911435,0.000088044726,0.0005536952,0.00012493871,0.00031036077,0.0062895943,0.005232638,0.049159512,0.9176647],"study_design_scores_gemma":[0.000012985096,0.000084651656,0.0012378962,0.0028992975,0.00007424261,0.0028299186,0.00008744439,0.0000528714,0.0008651795,0.0029159433,0.9889236,0.000015838612],"about_ca_topic_score_codex":0.0006645851,"about_ca_topic_score_gemma":0.00073790277,"teacher_disagreement_score":0.005178327,"about_ca_system_score_codex":0.00035544913,"about_ca_system_score_gemma":0.00069826766,"threshold_uncertainty_score":0.017323256},"labels":[],"label_agreement":null},{"id":"W4398256031","doi":"10.1084/jem.20232005","title":"Large-scale mutational analysis identifies UNC93B1 variants that drive TLR-mediated autoimmunity in mice and humans","year":2024,"lang":"en","type":"article","venue":"The Journal of Experimental Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Common Fund; Office of Strategic Coordination; National Institute of Neurological Disorders and Stroke; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Howard Hughes Medical Institute; Lupus Research Institute; National Institute of Allergy and Infectious Diseases; NIH Office of the Director; National Human Genome Research Institute; Centers for Disease Control and Prevention Foundation; National Science Foundation; Lupus Research Alliance; National Institutes of Health; Children's Mercy Hospital; Centers for Disease Control and Prevention","keywords":"TLR7; Autoimmunity; Biology; Immunology; TLR3; Autoimmune disease; Innate immune system; Toll-like receptor; Immune system; Antibody","score_opus":0.013572136516563244,"score_gpt":0.28724199855139454,"score_spread":0.2736698620348313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398256031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9921359,0.00085062155,0.004409784,0.00016837828,0.000023468896,0.000042699965,0.00094623904,0.00021821003,0.0012047008],"genre_scores_gemma":[0.9964144,0.00040472098,0.0019321761,0.00011497382,0.000013262722,0.000020047879,0.0005981491,0.000081945676,0.0004202264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996762,0.00007528728,0.000036814974,0.0001098277,0.000066579574,0.000035187164],"domain_scores_gemma":[0.9998449,0.00003543464,0.000061367624,0.000019090889,0.000010396199,0.000028790255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021805632,0.00079190236,0.00033156585,0.0008069974,0.00032465646,0.00038270376,0.00026061942,0.000760012,0.0020223998],"category_scores_gemma":[0.00035568114,0.00023821033,0.00030340007,0.00038466483,0.00035307085,0.000102646554,0.0003514411,0.00051433704,0.0004724086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067479897,0.000116584466,0.009009689,0.00006595571,0.00014413707,0.0046543814,0.00012803236,0.00044997368,0.9753483,0.00050963927,0.0006005949,0.00829774],"study_design_scores_gemma":[0.00050720637,0.0019015244,0.29828954,0.00030289855,0.00093235093,0.11700338,0.0005897792,0.009403811,0.5435066,0.0019441094,0.025481634,0.00013720631],"about_ca_topic_score_codex":0.0007705927,"about_ca_topic_score_gemma":0.00079766393,"teacher_disagreement_score":0.0020223998,"about_ca_system_score_codex":0.00017397325,"about_ca_system_score_gemma":0.00011326828,"threshold_uncertainty_score":0.0067655444},"labels":[],"label_agreement":null},{"id":"W4399031109","doi":"","title":"Intestinal expression of pro-infiammatory cytokines induced by oral intake of lipopolysaccharide (LPS) from E. coli in weaned pigs","year":2013,"lang":"en","type":"article","venue":"DOAJ (DOAJ: Directory of Open Access Journals)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Lipopolysaccharide; Microbiology; Biology; Immunology","score_opus":0.12324324124215062,"score_gpt":0.4502792698782738,"score_spread":0.3270360286361232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399031109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986547,0.0004272207,0.00022535847,0.000038101047,0.00002270598,0.0000211551,0.0002645751,0.0000097517695,0.00033646336],"genre_scores_gemma":[0.99182653,0.0009944825,0.001099976,0.00020017795,0.00002413054,0.00013152577,0.0008718925,0.000021358914,0.004829912],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99981624,0.000016769296,0.00001018742,0.00007013363,0.00003091024,0.000055826],"domain_scores_gemma":[0.9996232,0.00006948609,0.00012773793,0.000018363668,0.00004723263,0.00011398907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021355641,0.00035832849,0.00046984007,0.0003426137,0.00018701851,0.0004316245,0.00016108758,0.0004548578,0.0013671506],"category_scores_gemma":[0.00023982194,0.00036328327,0.00031711187,0.00015286729,0.00042996052,0.00041782687,0.00016187193,0.0010450189,0.00028843203],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027200864,0.0003675827,0.0047204676,0.00010348789,0.000013891615,0.00023281912,0.000107552405,0.000029698534,0.99026114,0.000017556527,0.000036868223,0.0013888569],"study_design_scores_gemma":[0.00022257166,0.021303225,0.52810085,0.00010771179,0.00016476047,0.0008090211,0.0014196468,0.00043432118,0.44463265,0.00010976899,0.0026443962,0.000051148098],"about_ca_topic_score_codex":0.00058852264,"about_ca_topic_score_gemma":0.0012304526,"teacher_disagreement_score":0.0013671506,"about_ca_system_score_codex":0.00039252196,"about_ca_system_score_gemma":0.0002738595,"threshold_uncertainty_score":0.0045735836},"labels":[],"label_agreement":null},{"id":"W4400280800","doi":"10.3390/poultry3030016","title":"A Whole Blood Method for Assessing the Innate Immune Response in Chickens","year":2024,"lang":"en","type":"article","venue":"Poultry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Innate immune system; Immune system; Lipopolysaccharide; Immunology; Peripheral blood; Immunity; Biology","score_opus":0.01409780029191493,"score_gpt":0.3207240079310925,"score_spread":0.3066262076391776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400280800","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50485826,0.020054312,0.4516938,0.00043080325,0.0013580689,0.0029133998,0.0048892135,0.001148654,0.012653471],"genre_scores_gemma":[0.44108987,0.012789749,0.5176927,0.0004684884,0.0003041688,0.0043247123,0.004362707,0.00019362173,0.018773869],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986243,0.00032940376,0.00014795545,0.000419096,0.00037822124,0.000101026446],"domain_scores_gemma":[0.99937576,0.00013181308,0.00012531165,0.00010560524,0.00019824338,0.00006328062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001054351,0.0010371306,0.00059715775,0.0015265608,0.00057070615,0.00050945336,0.000530301,0.0007999761,0.0024813097],"category_scores_gemma":[0.0004734236,0.00032706535,0.00041432894,0.000842552,0.0004351572,0.0003911511,0.00032059645,0.0011351845,0.0012215158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022137721,0.00010443664,0.0019966403,0.00018665916,0.000018408055,0.000053861444,0.00006820617,0.000036707588,0.98900336,0.00010252571,0.00014883158,0.008058941],"study_design_scores_gemma":[0.00006354507,0.0033602666,0.043941975,0.00012414143,0.0001746937,0.0012856912,0.00023427019,0.0015325963,0.9374514,0.00020692518,0.011566918,0.000057524154],"about_ca_topic_score_codex":0.0012814343,"about_ca_topic_score_gemma":0.0032483465,"teacher_disagreement_score":0.0024813097,"about_ca_system_score_codex":0.00023032876,"about_ca_system_score_gemma":0.00037920248,"threshold_uncertainty_score":0.008300841},"labels":[],"label_agreement":null},{"id":"W4400621681","doi":"10.1111/imm.13836","title":"Polygenic <scp>TB</scp> control and the sequence of innate/adaptive immune responses to infection: <scp>MHC</scp>‐<scp>II</scp> alleles determine the size of the <scp>S100A8</scp>/9‐producing neutrophil population","year":2024,"lang":"en","type":"article","venue":"Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Russian Science Foundation; McGill University","keywords":"Biology; Major histocompatibility complex; Congenic; Phenotype; Population; Immunology; Immune system; Acquired immune system; Allele; S100A8; Genetics; Gene","score_opus":0.011001741706125705,"score_gpt":0.2352698947286527,"score_spread":0.224268153022527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400621681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99869317,0.00009388001,0.0007062434,0.000018038543,0.000002478471,0.000007252032,0.0001739011,0.000018185818,0.00028679732],"genre_scores_gemma":[0.9981888,0.000076993,0.0006665315,0.000027120475,0.000005025513,0.000019038285,0.0002429973,0.000024520756,0.00074891926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998356,0.000032672553,0.000014341244,0.000047789337,0.000036977828,0.000032677133],"domain_scores_gemma":[0.9996462,0.00005744602,0.00014713994,0.00003784341,0.000017381217,0.00009395974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013032762,0.00025761264,0.00014457577,0.00038804338,0.00012743771,0.00022344833,0.00014612652,0.00019925968,0.0016094529],"category_scores_gemma":[0.0001044798,0.00011836611,0.00014291781,0.00014177157,0.00027000226,0.00009523039,0.00026880018,0.00047675805,0.00021393284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007976747,0.000019250892,0.0019177689,0.0000052312357,0.0000058954347,0.000054025848,0.000009738505,0.000020844616,0.99736184,0.000032289365,0.000009661852,0.00048364972],"study_design_scores_gemma":[0.00006236678,0.0008371341,0.59355396,0.00001729407,0.00008235462,0.0019930704,0.00011841255,0.0019594864,0.3997137,0.00017847853,0.0014657188,0.000017974895],"about_ca_topic_score_codex":0.0005377242,"about_ca_topic_score_gemma":0.0012048057,"teacher_disagreement_score":0.0016094529,"about_ca_system_score_codex":0.0001348083,"about_ca_system_score_gemma":0.0000947823,"threshold_uncertainty_score":0.005384147},"labels":[],"label_agreement":null},{"id":"W4400789143","doi":"10.1016/j.celrep.2024.114493","title":"Mitochondrial perturbations in low-protein-diet-fed mice are associated with altered neutrophil development and effector functions","year":2024,"lang":"en","type":"article","venue":"Cell Reports","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Princess Margaret Cancer Centre; Hospital for Sick Children","funders":"Scheme for Promotion of Academic and Research Collaboration; Canadian Institutes of Health Research; Hospital for Sick Children; Bill and Melinda Gates Foundation","keywords":"Immunology; Sepsis; Effector; Malnutrition; Lipopolysaccharide; Biology; Inflammation; Context (archaeology); Acute-phase protein; Immunity; Immune system; Medicine; Internal medicine","score_opus":0.006704417334510561,"score_gpt":0.19431931867749322,"score_spread":0.18761490134298267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400789143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863696,0.0021597159,0.005934409,0.00079234526,0.00011621762,0.0000796489,0.0027192372,0.00029161572,0.0015373225],"genre_scores_gemma":[0.9846133,0.0018311584,0.00572063,0.00038173114,0.000029333689,0.00022070836,0.0017758643,0.00011143666,0.005315826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997243,0.000047610254,0.000041361745,0.00007977553,0.000046627585,0.00006030715],"domain_scores_gemma":[0.9995844,0.00003080873,0.00015717735,0.000035235582,0.000026036498,0.00016631011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031306647,0.00070622447,0.0004501589,0.0011820766,0.0003548081,0.00052483263,0.00041263644,0.0009587383,0.00240586],"category_scores_gemma":[0.00018721136,0.0003289651,0.0004124506,0.00037162114,0.0008025102,0.00055855553,0.0004141558,0.0020154784,0.00054825837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016523919,0.00034002395,0.0013955592,0.0001236431,0.000020651194,0.000270141,0.00007557864,0.00012686453,0.99271727,0.0003434603,0.00016759556,0.0027666842],"study_design_scores_gemma":[0.00029338128,0.0038942224,0.04107195,0.00012175988,0.00010661274,0.0019414227,0.00045230545,0.003173078,0.94132465,0.0009988272,0.006571203,0.000050650346],"about_ca_topic_score_codex":0.00054801255,"about_ca_topic_score_gemma":0.0009941814,"teacher_disagreement_score":0.00240586,"about_ca_system_score_codex":0.00042838277,"about_ca_system_score_gemma":0.00030759172,"threshold_uncertainty_score":0.008048356},"labels":[],"label_agreement":null},{"id":"W4400980507","doi":"10.1182/blood.2024025017","title":"Varied roles for LGR6 in the immune response","year":2024,"lang":"en","type":"letter","venue":"Blood","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; University of Calgary","funders":"","keywords":"Immune system; Biology; Immunology","score_opus":0.011148896458402828,"score_gpt":0.23519459412057528,"score_spread":0.22404569766217244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400980507","genre_codex":"commentary","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011292171,0.005762339,0.00024519677,0.95637804,0.032112647,0.000011534221,0.000037999256,0.000045327477,0.004277666],"genre_scores_gemma":[0.023535555,0.006608775,0.0007040014,0.7861506,0.16900761,0.000071318085,0.000035507273,0.00004757687,0.013839019],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989396,0.00038648662,0.00008571591,0.00013802371,0.00030285298,0.00014733338],"domain_scores_gemma":[0.9972023,0.0018610005,0.0001112489,0.00012120259,0.00036379142,0.00034045865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002052038,0.0006235767,0.0011422813,0.00040876277,0.0018266576,0.0027285381,0.0011867835,0.020636344,0.0045587528],"category_scores_gemma":[0.0069227144,0.00036223457,0.0006964025,0.00026783548,0.0027761487,0.0019265274,0.001013125,0.023675147,0.002695366],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047527417,0.000057876892,0.0007932202,0.000101521044,0.000043129698,0.0042189322,0.00012000494,0.00011715093,0.001363822,0.007622332,0.9588091,0.026277622],"study_design_scores_gemma":[0.00044845487,0.00016185938,0.0016812833,0.0002679931,0.000062544445,0.0035533027,0.00040807523,0.0008372521,0.001658081,0.027897542,0.9629489,0.00007468875],"about_ca_topic_score_codex":0.0017972165,"about_ca_topic_score_gemma":0.0025524683,"teacher_disagreement_score":0.020636344,"about_ca_system_score_codex":0.0028489097,"about_ca_system_score_gemma":0.0013994031,"threshold_uncertainty_score":0.020670354},"labels":[],"label_agreement":null},{"id":"W4401082267","doi":"10.1002/eji.202451190","title":"Sepsis shapes the human γδ TCR repertoire in an age‐ and pathogen‐dependent manner","year":2024,"lang":"en","type":"article","venue":"European Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Walloon excellence in life sciences and biotechnology; Université de Lausanne; Medizinischen Hochschule Hannover; Fonds De La Recherche Scientifique - FNRS; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Science Foundation","keywords":"Repertoire; Biology; Streptococcus pneumoniae; T-cell receptor; Sepsis; Immunology; Microbiology; Staphylococcus aureus; T cell; Bacteria; Genetics; Immune system; Antibiotics","score_opus":0.015294654160027236,"score_gpt":0.24695332054225153,"score_spread":0.2316586663822243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401082267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982362,0.00052337797,0.0001357536,0.000026979053,0.0000054695242,0.000003052333,0.000085237196,0.0000057099046,0.0009781257],"genre_scores_gemma":[0.99823296,0.00075469445,0.00014616229,0.00007375614,0.000012616058,0.0000055133196,0.00016244537,0.0000075386893,0.0006043324],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998363,0.000042314008,0.000009356468,0.000029672812,0.000025378928,0.000056889516],"domain_scores_gemma":[0.99982977,0.000032537442,0.000059861042,0.000013663358,0.000023145914,0.00004103222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014009124,0.00015776446,0.0001287698,0.00026554885,0.00012840073,0.0003540355,0.00007658237,0.00022294928,0.0018108194],"category_scores_gemma":[0.0004476172,0.00013491993,0.00009414158,0.00016917427,0.00014429068,0.0002060365,0.0003285276,0.00029672278,0.00054599775],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007857317,0.00007496867,0.2301963,0.000090441376,0.000036138434,0.0009652502,0.0008232995,0.00050121907,0.737663,0.00032771745,0.00060710934,0.027928889],"study_design_scores_gemma":[0.000020277881,0.0009017336,0.9569661,0.000059690283,0.000037522812,0.006876632,0.00083946314,0.00041947866,0.026976587,0.00028601428,0.0065960255,0.00002043478],"about_ca_topic_score_codex":0.00035380654,"about_ca_topic_score_gemma":0.000472546,"teacher_disagreement_score":0.0018108194,"about_ca_system_score_codex":0.00012464315,"about_ca_system_score_gemma":0.00014023065,"threshold_uncertainty_score":0.006057799},"labels":[],"label_agreement":null},{"id":"W4401476093","doi":"10.1093/jleuko/qiae175","title":"STING coordinates resolution of inflammation during wound repair by modulating macrophage trafficking through STAT3","year":2024,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Sting; Inflammation; Chemokine; Macrophage; Wound healing; Biology; Monocyte; Immunology; Innate immune system; CCR2; Chemokine receptor; Cell biology; Cancer research; Immune system","score_opus":0.011196126980121892,"score_gpt":0.2632345073815783,"score_spread":0.2520383804014564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401476093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99175113,0.001869693,0.003929582,0.00011716257,0.0000396578,0.000017653949,0.0003357904,0.00013844151,0.0018009217],"genre_scores_gemma":[0.99729675,0.00056269957,0.001038758,0.000032764885,0.000007042631,0.00000973746,0.0001323039,0.000011471868,0.0009085014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991775,0.000015405909,0.000007849082,0.000014263337,0.000016206512,0.000028485909],"domain_scores_gemma":[0.9999479,0.0000055981973,0.000021533373,0.000005100494,0.0000050934404,0.000014649014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011930345,0.00020592316,0.0001422101,0.00016902143,0.00013935103,0.00041486113,0.00012866632,0.00014548643,0.0012620685],"category_scores_gemma":[0.00007662569,0.00007580805,0.00015571249,0.00011627893,0.000221739,0.00024905152,0.00016717034,0.0005089282,0.00028979202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021115672,0.000016290922,0.0003328529,0.00003492667,0.0000025463974,0.000031362782,0.000014528007,0.00016587385,0.9966732,0.00026539044,0.00005152827,0.0022004282],"study_design_scores_gemma":[0.00002585523,0.00028852385,0.00576961,0.000012597781,0.000018750921,0.00015680533,0.000057772606,0.0029718322,0.9869653,0.00019268449,0.0035339592,0.000006233916],"about_ca_topic_score_codex":0.00025648795,"about_ca_topic_score_gemma":0.0007060421,"teacher_disagreement_score":0.0012620685,"about_ca_system_score_codex":0.00028057507,"about_ca_system_score_gemma":0.00027606706,"threshold_uncertainty_score":0.0042220354},"labels":[],"label_agreement":null},{"id":"W4401905228","doi":"10.1007/978-1-0716-4108-8_17","title":"Phagosome Isolation with Magnetic Beads and Purification of Toll-Like Receptor (TLR) Complexes in Phagosomes","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Phagosome; Endosome; Innate immune system; Cell biology; Phagocytosis; TLR3; Toll-like receptor; Biology; Macrophage; Chemistry; Immune system; Immunology; Biochemistry; Intracellular","score_opus":0.012653379273850646,"score_gpt":0.3272520302717272,"score_spread":0.3145986509978766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905228","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68517506,0.013662869,0.27668825,0.0019901344,0.00085019553,0.0020607004,0.008032868,0.001256987,0.01028289],"genre_scores_gemma":[0.75136495,0.0050484985,0.20656344,0.0014482749,0.00024626928,0.0015942119,0.01632152,0.00054120505,0.016871661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999151,0.00011333745,0.00010329594,0.00017978421,0.00023053508,0.00022197486],"domain_scores_gemma":[0.9997043,0.00007611312,0.00003349081,0.00005554468,0.00008048545,0.00005013394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005635819,0.0006414714,0.0011219335,0.0007386401,0.0008060736,0.0009294757,0.0006525239,0.0006337436,0.001781484],"category_scores_gemma":[0.0006512335,0.00049898564,0.0007492333,0.0006678992,0.00030410377,0.00045333564,0.0008173671,0.0018217606,0.002339311],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019505885,0.000059941995,0.00037918103,0.00013785364,0.000027494212,0.00006424744,0.00003276894,0.00009752501,0.99559754,0.00029512728,0.00041994217,0.0026932384],"study_design_scores_gemma":[0.000045410736,0.000102665865,0.004008556,0.000035812503,0.00004108297,0.00028744162,0.00004001999,0.0023817797,0.98412067,0.00025364867,0.008666565,0.000016387341],"about_ca_topic_score_codex":0.0014956318,"about_ca_topic_score_gemma":0.0029523643,"teacher_disagreement_score":0.001781484,"about_ca_system_score_codex":0.00063691195,"about_ca_system_score_gemma":0.00060718984,"threshold_uncertainty_score":0.0059596896},"labels":[],"label_agreement":null},{"id":"W4401905307","doi":"10.1007/978-1-0716-4108-8_20","title":"The Application of Organoids in the Study of Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Organoid; Biology; Immunity; Intrinsic immunity; Viral infection; Acquired immune system; Immunology; Immune system; Cell biology; Virus","score_opus":0.014175887829756975,"score_gpt":0.37452374566128716,"score_spread":0.36034785783153017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905307","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34456992,0.18788967,0.43466955,0.004075445,0.0019866514,0.00031506276,0.0016278955,0.00057208654,0.024293737],"genre_scores_gemma":[0.76194924,0.07183235,0.15451445,0.00080780254,0.00028083855,0.0003907924,0.00094958534,0.00018034414,0.009094476],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99956554,0.00017696113,0.00001983789,0.000104187646,0.00008104583,0.000052496063],"domain_scores_gemma":[0.99944586,0.0002683659,0.000046842717,0.00012757163,0.000039413448,0.00007191079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010441078,0.00045911726,0.0005325391,0.0008516914,0.00065364107,0.0010365794,0.00059015723,0.0007552843,0.001421177],"category_scores_gemma":[0.0004895434,0.0002573362,0.0007528225,0.00045702263,0.0016800258,0.0010789889,0.0012940839,0.002057314,0.00050096057],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026192603,0.000029019608,0.00036522723,0.0003301917,0.000015316517,0.00018264992,0.00020582761,0.00047745768,0.9676812,0.009187444,0.00027356314,0.020990014],"study_design_scores_gemma":[0.000052751264,0.00075983297,0.0018888045,0.00019880552,0.00006825329,0.0012458516,0.00034979728,0.001432275,0.8962552,0.009665484,0.0880274,0.000055588214],"about_ca_topic_score_codex":0.0005935294,"about_ca_topic_score_gemma":0.0005431776,"teacher_disagreement_score":0.001421177,"about_ca_system_score_codex":0.00059377885,"about_ca_system_score_gemma":0.00049809885,"threshold_uncertainty_score":0.005521834},"labels":[],"label_agreement":null},{"id":"W4403280188","doi":"10.3390/biom14101271","title":"Molecular Thumbprints: Biological Signatures That Measure Loss of Identity","year":2024,"lang":"en","type":"article","venue":"Biomolecules","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research; National Institutes of Health; McKnight Foundation","keywords":"Disease; Inflammation; Identity (music); Biology; Psychological resilience; Neuroscience; Bioinformatics; Immunology; Computational biology; Medicine; Psychology; Pathology; Psychotherapist","score_opus":0.01809756831878746,"score_gpt":0.26476540808827903,"score_spread":0.24666783976949158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403280188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6836608,0.031734075,0.20609674,0.010571203,0.0033754678,0.000354745,0.0041455342,0.002344835,0.057716645],"genre_scores_gemma":[0.92332286,0.004992523,0.05509584,0.0033495335,0.0004969662,0.00022294548,0.0009175043,0.00019201917,0.011409725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907815,0.00021535512,0.00005552953,0.00022697363,0.00031772442,0.0001062942],"domain_scores_gemma":[0.9975592,0.00045276008,0.001006961,0.00037587428,0.00025637334,0.00034879846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010445426,0.00058419287,0.00061055046,0.0026628836,0.00089689664,0.0028941722,0.00069144205,0.001943974,0.004490002],"category_scores_gemma":[0.0034457536,0.00036497714,0.0003846179,0.0016095778,0.0032637243,0.0034512104,0.0019611574,0.0021830767,0.0013416441],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013024928,0.00022532695,0.064511746,0.00090163836,0.000298977,0.0012965007,0.002238774,0.0024550923,0.6037702,0.102873534,0.011076748,0.20904897],"study_design_scores_gemma":[0.00014187586,0.002783978,0.20124836,0.0007038801,0.00040039173,0.014256991,0.0057971645,0.012058747,0.33365664,0.2527054,0.17554283,0.0007037569],"about_ca_topic_score_codex":0.00029930085,"about_ca_topic_score_gemma":0.00036166402,"teacher_disagreement_score":0.004490002,"about_ca_system_score_codex":0.000730195,"about_ca_system_score_gemma":0.00036534667,"threshold_uncertainty_score":0.01502049},"labels":[],"label_agreement":null},{"id":"W4403316503","doi":"10.1007/s00441-024-03924-4","title":"A historical perspective of Kupffer cells in the context of infection","year":2024,"lang":"en","type":"review","venue":"Cell and Tissue Research","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Context (archaeology); Perspective (graphical); Kupffer cell; Biology; Computational biology; Pathology; Cell biology; Immunology; Medicine; Computer science","score_opus":0.07827306790969435,"score_gpt":0.39235901832180164,"score_spread":0.3140859504121073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403316503","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000025675143,0.998028,0.00006542481,0.000637056,0.0008375544,6.958439e-7,0.0000032167732,0.0000016085345,0.0004007686],"genre_scores_gemma":[0.00042928648,0.9964173,0.00010819244,0.0007622514,0.0019201104,0.0000027739134,0.000005899138,0.0000010773406,0.0003531502],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999587,0.00014330099,0.000048934347,0.00006611681,0.00010853838,0.000046049998],"domain_scores_gemma":[0.9989794,0.0006372982,0.00007218175,0.000027395847,0.00018467709,0.00009898561],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016789968,0.0012920481,0.0017996329,0.0034980474,0.00069743796,0.0031069163,0.0012519348,0.003158366,0.0023451508],"category_scores_gemma":[0.0021434461,0.00034287578,0.00047415865,0.0040276223,0.00270287,0.003991565,0.0017451929,0.005076447,0.0015017779],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025233752,0.00010729889,0.00035041614,0.018901918,0.00009271716,0.001085213,0.00060325506,0.00058151205,0.0021525319,0.053456794,0.14593317,0.7764828],"study_design_scores_gemma":[0.000008149951,0.000045558245,0.0002635961,0.0040527554,0.000027253434,0.0011263962,0.00014569743,0.000048982976,0.00012880273,0.0058910665,0.98824525,0.000016411856],"about_ca_topic_score_codex":0.0014318587,"about_ca_topic_score_gemma":0.002280067,"teacher_disagreement_score":0.0034980474,"about_ca_system_score_codex":0.0015156623,"about_ca_system_score_gemma":0.001930643,"threshold_uncertainty_score":0.010996938},"labels":[],"label_agreement":null},{"id":"W4404279731","doi":"10.21608/ejchem.2024.319637.10500","title":"Genetic Polymorphism of Toll-Like Receptor 4 Gene (rs4986791) among Adult Patients with Acute Myeloid Leukemia","year":2024,"lang":"en","type":"article","venue":"Egyptian Journal of Chemistry","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Myeloid leukemia; Gene; Toll-like receptor; Polymorphism (computer science); Toll; Genetics; Medicine; Biology; Receptor; Immunology; Cancer research; Allele; Innate immune system","score_opus":0.0023292506232360363,"score_gpt":0.17874974928136475,"score_spread":0.17642049865812873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404279731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999009,0.00026525187,0.000120902325,0.00004014268,0.0000074101636,0.000008049082,0.00021256469,0.0000026715925,0.00033410612],"genre_scores_gemma":[0.99956375,0.00006283023,0.00007531256,0.000020638887,0.00000919912,0.000006811567,0.00012402289,0.0000010765568,0.00013633429],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979645,0.00004875783,0.00002707064,0.00006155209,0.000039859362,0.000026366542],"domain_scores_gemma":[0.99973196,0.000066968816,0.00011106462,0.00001809558,0.00002976281,0.00004212013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019417908,0.00020134846,0.00024538024,0.0003401661,0.00033281837,0.00022563567,0.00015804995,0.0003382639,0.0026196588],"category_scores_gemma":[0.0008026054,0.00009292343,0.00018492927,0.0005187911,0.00013005736,0.00015194013,0.00015660947,0.00024840457,0.00029810137],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003703306,0.000044695284,0.993964,0.000016016127,0.00004625554,0.0005125168,0.00006900381,0.000057371817,0.0026282195,0.000045815807,0.00017899694,0.0020667275],"study_design_scores_gemma":[0.000023845552,0.00021267238,0.9958093,0.000010292607,0.00006543299,0.002468741,0.00010576622,0.00023896193,0.0003882854,0.00010762479,0.000564541,0.000004521223],"about_ca_topic_score_codex":0.0006069234,"about_ca_topic_score_gemma":0.0006439544,"teacher_disagreement_score":0.0026196588,"about_ca_system_score_codex":0.0001025986,"about_ca_system_score_gemma":0.00009455156,"threshold_uncertainty_score":0.008763611},"labels":[],"label_agreement":null},{"id":"W4404479236","doi":"10.1016/b978-0-128-24465-4.00112-5","title":"Variable Lymphocyte Receptors: The Basis of Adaptive Immunity in Jawless Vertebrates","year":2024,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Acquired immune system; Biology; Lymphocyte; Immunity; Receptor; Immunology; Neuroscience; Immune system; Genetics","score_opus":0.011668918051867781,"score_gpt":0.21539600812878512,"score_spread":0.20372709007691733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404479236","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019439882,0.6746167,0.014068831,0.005473339,0.0020715673,0.00002960698,0.00031285416,0.00022688306,0.28376037],"genre_scores_gemma":[0.08159992,0.287307,0.010424177,0.0018100871,0.0017432298,0.000037811107,0.0005137773,0.0000784327,0.6164856],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999752,0.000001913898,0.0000014521547,0.0000065405666,0.00001059052,0.000004287723],"domain_scores_gemma":[0.99998534,0.0000061626893,0.0000018177949,0.000001021987,0.0000025857569,0.0000030429883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011494302,0.0002739125,0.00025105895,0.00029907553,0.00016936004,0.0012027451,0.0004350508,0.00058782863,0.007140794],"category_scores_gemma":[0.00006481705,0.00015583978,0.00013306033,0.0003105933,0.00040904773,0.0010755509,0.00027312184,0.0010011651,0.0029481032],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018819049,0.000041251755,0.0005616343,0.00063176604,0.000017005998,0.00043754894,0.00039642167,0.00090717163,0.13552399,0.13583069,0.054043096,0.6714212],"study_design_scores_gemma":[0.000010359462,0.00007324277,0.0015841901,0.00018831022,0.000013785631,0.0007566925,0.0001258894,0.00037858394,0.005221106,0.025790645,0.9658464,0.000010880795],"about_ca_topic_score_codex":0.0007009312,"about_ca_topic_score_gemma":0.001344861,"teacher_disagreement_score":0.007140794,"about_ca_system_score_codex":0.0003104015,"about_ca_system_score_gemma":0.00022442298,"threshold_uncertainty_score":0.02388829},"labels":[],"label_agreement":null},{"id":"W4404564312","doi":"10.1126/sciadv.adq4785","title":"A potent proresolving mediator 17R-resolvin D2 from human macrophages, monocytes, and saliva","year":2024,"lang":"en","type":"article","venue":"Science Advances","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National University of Singapore; Yale University","keywords":"Saliva; CD14; Phagocytosis; CD163; Chemistry; Receptor; Monocyte; Biology; Macrophage; Biochemistry; Immunology; In vitro","score_opus":0.008773920950584192,"score_gpt":0.2704933472727134,"score_spread":0.2617194263221292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404564312","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9773222,0.0121835,0.0075336974,0.00016326795,0.00007255523,0.00008488303,0.00079286884,0.000051273466,0.001795755],"genre_scores_gemma":[0.9843672,0.003831605,0.0077228416,0.00011593678,0.000046189267,0.00006110704,0.0012358314,0.000018313835,0.0026009183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998418,0.00003224241,0.000014615434,0.000026531345,0.000051034585,0.000033749595],"domain_scores_gemma":[0.99993944,0.000008033676,0.000013570909,0.000008376117,0.000016829154,0.000013754627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024320201,0.00042495833,0.0002524653,0.00020292851,0.0001338705,0.00029566747,0.00013032713,0.00029144896,0.0009153285],"category_scores_gemma":[0.00014618812,0.00012884816,0.00033190232,0.00014332586,0.0001713608,0.00014427734,0.00028455674,0.00034559405,0.00042669877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007305931,0.0000053097897,0.00016080936,0.000034670604,0.0000033434524,0.000038952923,0.000011375844,0.00001340966,0.9982703,0.000023938519,0.000011231074,0.0013536942],"study_design_scores_gemma":[0.000013379617,0.00026127716,0.002004396,0.0000067485907,0.00001402672,0.0002759416,0.00003896783,0.0000764953,0.9941737,0.000031562347,0.0030991281,0.0000044537665],"about_ca_topic_score_codex":0.00027497538,"about_ca_topic_score_gemma":0.00039655555,"teacher_disagreement_score":0.0009153285,"about_ca_system_score_codex":0.0001407899,"about_ca_system_score_gemma":0.00027452427,"threshold_uncertainty_score":0.0030620694},"labels":[],"label_agreement":null},{"id":"W4404659718","doi":"10.1016/j.biologicals.2024.101808","title":"The impact of LPS mutants on endotoxin masking in different detection systems","year":2024,"lang":"en","type":"article","venue":"Biologicals","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Advanced Micro Devices (Canada)","funders":"","keywords":"Masking (illustration); Mutant; Chemistry; Microbiology; Biology; Computational biology; Biochemistry; Gene","score_opus":0.01849848729144004,"score_gpt":0.2881980950023824,"score_spread":0.26969960771094237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404659718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965913,0.0004980908,0.002478219,0.000035439487,0.000013809557,0.000023674524,0.0000869088,0.00002163162,0.00025105436],"genre_scores_gemma":[0.9932841,0.00037618505,0.0055307117,0.000050953127,0.0000068210425,0.000023348985,0.0002005796,0.000017363345,0.0005098953],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879384,0.00048520454,0.00012865238,0.00015203605,0.00032261477,0.00011753882],"domain_scores_gemma":[0.9991497,0.00031251024,0.00023505162,0.00009252209,0.00015191453,0.000058442725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007629869,0.00046926696,0.00033598038,0.00020009166,0.00012274385,0.00044364054,0.00017223407,0.00036951338,0.00032916557],"category_scores_gemma":[0.0011508391,0.00016177117,0.0002900245,0.00016121188,0.00023505333,0.00027073149,0.00027283293,0.00046025368,0.00015134469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016474671,0.000029487892,0.0005585856,0.00003229719,0.000008268597,0.000015339358,0.000021863963,0.000069454785,0.99829084,0.000013222749,0.0000069095813,0.0007890704],"study_design_scores_gemma":[0.000003321247,0.0009218598,0.0035807437,0.0000056820404,0.000023396826,0.00009030277,0.000033616423,0.00049702846,0.99458957,0.000011693744,0.00023569031,0.000007186589],"about_ca_topic_score_codex":0.00052419526,"about_ca_topic_score_gemma":0.0005854414,"teacher_disagreement_score":0.0007629869,"about_ca_system_score_codex":0.00017326008,"about_ca_system_score_gemma":0.00015117624,"threshold_uncertainty_score":0.0040351152},"labels":[],"label_agreement":null},{"id":"W4404677900","doi":"10.1038/s41467-024-54674-4","title":"Promotion of TLR7-MyD88-dependent inflammation and autoimmunity in mice through stem-loop changes in Lnc-Atg16l1","year":2024,"lang":"en","type":"article","venue":"Nature Communications","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Natural Science Foundation of China","keywords":"Autoimmunity; Inflammation; TLR7; Immunology; Cancer research; Medicine; Biology; Cell biology; Immune system; Toll-like receptor; Innate immune system","score_opus":0.025133177765485182,"score_gpt":0.29711861306498044,"score_spread":0.27198543529949526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404677900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9849814,0.0012068271,0.009166586,0.00039034375,0.0001341327,0.00006236857,0.0017567246,0.00052317523,0.0017783723],"genre_scores_gemma":[0.98477757,0.000510916,0.0069165775,0.0002520326,0.000020160536,0.00014593873,0.0014333592,0.00020159852,0.005741946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99969184,0.000039934937,0.00003564092,0.00010157396,0.000068801826,0.00006227357],"domain_scores_gemma":[0.99964213,0.00003196751,0.00017366742,0.000032750107,0.000023739094,0.000095821946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021903483,0.0003872392,0.00032653572,0.00038612983,0.00021527204,0.00030705056,0.0003248884,0.0006079543,0.0029016233],"category_scores_gemma":[0.00017102047,0.0002635085,0.00058549695,0.00017726666,0.000467831,0.00024989806,0.0002742823,0.001255145,0.0008800346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013549696,0.000023832958,0.000162612,0.000044566477,0.000006593654,0.0000386297,0.000014124816,0.00006127939,0.99871576,0.00009403347,0.00003524201,0.00066795683],"study_design_scores_gemma":[0.000037144007,0.00028846556,0.0035166556,0.000013221237,0.000024386458,0.00020555042,0.00004191799,0.0013290292,0.99162614,0.00009293262,0.0028160755,0.000008468825],"about_ca_topic_score_codex":0.00043532113,"about_ca_topic_score_gemma":0.0007922616,"teacher_disagreement_score":0.0029016233,"about_ca_system_score_codex":0.00039040824,"about_ca_system_score_gemma":0.00021802117,"threshold_uncertainty_score":0.009706855},"labels":[],"label_agreement":null},{"id":"W4405485646","doi":"10.1016/j.biopha.2024.117755","title":"A novel serous ovarian carcinoma model induced by DMBA: Results from OncoTherad® (MRB-CFI-1) immunotherapy preclinical testing","year":2024,"lang":"en","type":"article","venue":"Biomedicine & Pharmacotherapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Fundação de Amparo à Pesquisa do Estado de São Paulo; Michael Smith Health Research BC","keywords":"Ovarian carcinoma; DMBA; Serous fluid; Medicine; Immunotherapy; Oncology; Cancer research; Internal medicine; Ovarian cancer; Cancer; Carcinogenesis","score_opus":0.0648656013213465,"score_gpt":0.33898679699980794,"score_spread":0.27412119567846144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405485646","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99551046,0.0006377731,0.0019704462,0.000069109585,0.00004950933,0.00011591495,0.00054897997,0.00005858591,0.0010392456],"genre_scores_gemma":[0.99239737,0.00095977425,0.002004746,0.000057107285,0.000017817187,0.00013132514,0.0008290049,0.00001937386,0.003583481],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999853,0.000014953925,0.0000144907035,0.000030670355,0.000048532016,0.000038313276],"domain_scores_gemma":[0.9997875,0.00002649496,0.000054496755,0.000036273424,0.000022718343,0.00007252115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022163881,0.00044118206,0.00028024224,0.00048946036,0.00013958376,0.00018547388,0.00013579747,0.00022789549,0.0014864949],"category_scores_gemma":[0.00012710228,0.00010363983,0.00028824402,0.00019340098,0.00024809074,0.00019901947,0.00015594444,0.0005705539,0.0002661747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011159427,0.00072121347,0.00079586543,0.00007513726,0.00001056513,0.00015109139,0.00004510577,0.00012566765,0.99385345,0.000088967696,0.000073900446,0.0029431866],"study_design_scores_gemma":[0.0001451196,0.0073577133,0.009431854,0.000010940322,0.000060471662,0.00052828947,0.00010195737,0.00090756424,0.9787825,0.00006042295,0.002604438,0.000008864958],"about_ca_topic_score_codex":0.00066451286,"about_ca_topic_score_gemma":0.0010102798,"teacher_disagreement_score":0.0014864949,"about_ca_system_score_codex":0.00014809285,"about_ca_system_score_gemma":0.00023724906,"threshold_uncertainty_score":0.004972756},"labels":[],"label_agreement":null},{"id":"W4405843326","doi":"10.1186/s10020-024-01052-x","title":"Molecular profiles of blood from numerous species that differ in sensitivity to acute inflammation","year":2024,"lang":"en","type":"article","venue":"Molecular Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hospital for Sick Children; Centre Hospitalier Universitaire Sainte-Justine","funders":"National Institute of General Medical Sciences; Defense Advanced Research Projects Agency; National Institutes of Health; Open Medicine Foundation; U.S. Department of Energy","keywords":"Inflammation; Biology; Lipopolysaccharide; Sepsis; Transcriptome; Immunology; Gene; Autophagy; Cell biology; Apoptosis; Gene expression; Genetics","score_opus":0.007809828647201919,"score_gpt":0.23193295556420482,"score_spread":0.2241231269170029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405843326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963158,0.0010669348,0.00085388764,0.000054894354,0.00001838024,0.000012705604,0.0008804928,0.000013883742,0.0007830335],"genre_scores_gemma":[0.99277884,0.0009821978,0.0025121348,0.00022036387,0.000029922949,0.000046371475,0.0024753353,0.000020774633,0.0009340079],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99983275,0.000028465536,0.000012808673,0.00006690611,0.000027979117,0.00003112284],"domain_scores_gemma":[0.9998253,0.000030461088,0.00006242757,0.000017130391,0.000030781877,0.00003389163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022480314,0.0002255974,0.0003153975,0.00067467644,0.00032391725,0.0005453016,0.000116443465,0.00030048168,0.0009889492],"category_scores_gemma":[0.00036388362,0.000119575765,0.00017885292,0.00047660377,0.00030491428,0.00023110572,0.0003868922,0.0003539005,0.00030809446],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006834271,0.000037693433,0.040987298,0.000101441074,0.00008831678,0.00020348138,0.000484338,0.000043997705,0.95117855,0.00013232089,0.00011032789,0.0059489175],"study_design_scores_gemma":[0.00001565836,0.00072166,0.9551981,0.000035639092,0.00014207767,0.0018819855,0.0010824698,0.00030329794,0.036639012,0.00043061515,0.0035257677,0.000023704577],"about_ca_topic_score_codex":0.00039515324,"about_ca_topic_score_gemma":0.0005613557,"teacher_disagreement_score":0.0009889492,"about_ca_system_score_codex":0.000085525084,"about_ca_system_score_gemma":0.00010012356,"threshold_uncertainty_score":0.0033084154},"labels":[],"label_agreement":null},{"id":"W4405965731","doi":"10.3390/vaccines13010033","title":"Transcriptional Systems Vaccinology Approaches for Vaccine Adjuvant Profiling","year":2025,"lang":"en","type":"article","venue":"Vaccines","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University; University of Saskatchewan","funders":"","keywords":"Computational biology; Adjuvant; Immune system; Biology; Systems biology; Vaccine adjuvant; Innate immune system; Gene; Mechanism (biology); Immunology; Genetics","score_opus":0.029678456037812825,"score_gpt":0.249279681844984,"score_spread":0.21960122580717117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405965731","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026930515,0.05090641,0.90025675,0.0034001342,0.0014131311,0.0008122203,0.0036237272,0.0037923404,0.008864677],"genre_scores_gemma":[0.13508768,0.07036961,0.77016526,0.0035520175,0.0011013915,0.0020415152,0.007507189,0.0014630499,0.008712208],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824035,0.00049416214,0.0001058765,0.0004718688,0.00054389023,0.00014381514],"domain_scores_gemma":[0.99891424,0.00052539195,0.00012222271,0.00015168852,0.00023091762,0.000055675355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029661972,0.0010053283,0.0016361378,0.0013517451,0.000601195,0.0024865982,0.001209236,0.0014037137,0.0035115834],"category_scores_gemma":[0.0020407138,0.0007460916,0.0015119079,0.001110951,0.0010400069,0.0017305962,0.0015339281,0.0044912985,0.0030420145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018599676,0.00012133713,0.0017497091,0.0024389045,0.00014763199,0.00017289186,0.00026853022,0.004623893,0.86066526,0.022939527,0.0049105464,0.10177585],"study_design_scores_gemma":[0.00006658954,0.00068639463,0.0035382728,0.00047936494,0.00028255678,0.0008532049,0.00037926366,0.035212625,0.5792583,0.030223617,0.34882408,0.00019571671],"about_ca_topic_score_codex":0.0006180854,"about_ca_topic_score_gemma":0.001026744,"teacher_disagreement_score":0.0035115834,"about_ca_system_score_codex":0.0013059805,"about_ca_system_score_gemma":0.0010812568,"threshold_uncertainty_score":0.01568693},"labels":[],"label_agreement":null},{"id":"W4406442022","doi":"10.1016/j.ysur.2014.03.062","title":"10.1016/j.ysur.2014.03.062","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Antagonist; Sepsis; Internal medicine; Randomized controlled trial; Receptor","score_opus":0.003830681444471306,"score_gpt":0.1679416365442671,"score_spread":0.1641109550997958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406442022","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008123733,0.017153578,0.005161065,0.0081980815,0.0029458934,0.00011963009,0.003234743,0.0024579728,0.9526054],"genre_scores_gemma":[0.018910289,0.0049225744,0.0029230139,0.0017374008,0.0008201619,0.00007412807,0.0018305967,0.0003267432,0.9684551],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999739,0.000020353371,0.000019419767,0.00007815165,0.00007515885,0.00006789402],"domain_scores_gemma":[0.9991786,0.0001057541,0.00011626575,0.000050942836,0.00015227632,0.00039622784],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0007045372,0.0012342164,0.0005679487,0.0014225771,0.00092932733,0.002911223,0.0008033135,0.0030958094,0.8845572],"category_scores_gemma":[0.001085571,0.0004136064,0.00058373145,0.0006579047,0.0009558535,0.0021920684,0.0013300274,0.001614853,0.82655585],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044279083,0.00033908372,0.0050264243,0.00061290554,0.000046946217,0.0004370758,0.00015857245,0.00031800746,0.002110826,0.0089715365,0.23728752,0.7442484],"study_design_scores_gemma":[0.00006601817,0.00020063264,0.007227309,0.00092412595,0.00004899171,0.003102764,0.00034876727,0.00039190907,0.0010566297,0.0076666307,0.97893083,0.000035311445],"about_ca_topic_score_codex":0.0015561078,"about_ca_topic_score_gemma":0.0013954923,"teacher_disagreement_score":0.11544281,"about_ca_system_score_codex":0.00074293115,"about_ca_system_score_gemma":0.001170792,"threshold_uncertainty_score":0.16466516},"labels":[],"label_agreement":null},{"id":"W4406471991","doi":"10.1016/s1634-6939(20)30314-8","title":"10.1016/s1634-6939(20)30314-8","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Business","score_opus":0.0037172771970906764,"score_gpt":0.16424960666580393,"score_spread":0.16053232946871326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406471991","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004705896,0.0006949821,0.00061594875,0.00043381326,0.00049587624,0.00011324263,0.00064724375,0.0007482583,0.9957801],"genre_scores_gemma":[0.0004936144,0.0002800749,0.0003234809,0.00022201116,0.00012733148,0.00006076681,0.0003596574,0.00012445696,0.99800867],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991721,0.000051439143,0.000074433156,0.0002843478,0.00022546596,0.00019223869],"domain_scores_gemma":[0.9974177,0.0005868217,0.00015841427,0.00026690925,0.00047057684,0.0010995365],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0013125452,0.0037017514,0.0022964461,0.0031993159,0.0028628528,0.00439797,0.0038636166,0.007293775,0.9902851],"category_scores_gemma":[0.0017189394,0.0012585699,0.0021121055,0.0024575326,0.0023974665,0.0058345976,0.0039274413,0.0035837574,0.9925487],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006164018,0.0003467272,0.0007803695,0.0009218003,0.000051852632,0.00031729465,0.00011068584,0.00044701915,0.0029429023,0.0052821403,0.35229757,0.63588524],"study_design_scores_gemma":[0.00008917814,0.00019836478,0.0008278327,0.00038573093,0.000015645182,0.00046149135,0.00011302518,0.00018482386,0.00044884003,0.00070567144,0.9965406,0.000028839962],"about_ca_topic_score_codex":0.0033992007,"about_ca_topic_score_gemma":0.0029215615,"teacher_disagreement_score":0.009714901,"about_ca_system_score_codex":0.0012775254,"about_ca_system_score_gemma":0.0012770115,"threshold_uncertainty_score":0.013857126},"labels":[],"label_agreement":null},{"id":"W4406571238","doi":"10.1016/j.ynpm.2014.06.019","title":"10.1016/j.ynpm.2014.06.019","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Escherichia coli; Host (biology); Sepsis; Microbiology; Homeostasis; Host resistance; Biology; Immunology; Neonatal sepsis; Cell biology; Genetics; Gene","score_opus":0.0036295346638558815,"score_gpt":0.16715697515939132,"score_spread":0.16352744049553544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406571238","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058289673,0.018372124,0.0030573965,0.00770721,0.002925041,0.000091686255,0.0019384148,0.0013535104,0.9587257],"genre_scores_gemma":[0.013949692,0.00543378,0.0020035785,0.0016848715,0.00094670546,0.00006153231,0.0010469051,0.00018585101,0.9746869],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99981636,0.000015526586,0.000013039421,0.000052623036,0.000051328145,0.00005111219],"domain_scores_gemma":[0.9993598,0.00006665339,0.00006976974,0.00003032716,0.000109717366,0.00036374116],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00046886902,0.0009926136,0.00048075186,0.0009216882,0.00074067287,0.0021807868,0.0007415232,0.002546992,0.8641309],"category_scores_gemma":[0.0007317108,0.00032631814,0.0004399052,0.00042744252,0.00076935714,0.0017198257,0.0009744379,0.0014314321,0.7854723],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046936216,0.0002990267,0.0038133832,0.0005339575,0.00003927707,0.0006052817,0.00011517066,0.00021419811,0.0025050705,0.007256685,0.24967562,0.73447293],"study_design_scores_gemma":[0.000055871435,0.0001678833,0.005213085,0.0007567715,0.000031705,0.0034893183,0.00020107704,0.00020073293,0.0008478203,0.004588996,0.9844245,0.00002235048],"about_ca_topic_score_codex":0.0013515983,"about_ca_topic_score_gemma":0.0015946256,"teacher_disagreement_score":0.13586909,"about_ca_system_score_codex":0.0006973233,"about_ca_system_score_gemma":0.001065438,"threshold_uncertainty_score":0.19380075},"labels":[],"label_agreement":null},{"id":"W4406579505","doi":"10.1016/s1541-9800(10)70564-0","title":"10.1016/s1541-9800(10)70564-0","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Primary (astronomy); Tumor necrosis factor alpha; Medicine; Immunology; Physics","score_opus":0.004090242220849641,"score_gpt":0.16637059622232434,"score_spread":0.1622803540014747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406579505","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00053583813,0.0008261831,0.0006367557,0.0005090358,0.0005310829,0.00011372462,0.00054573064,0.0006547369,0.9956468],"genre_scores_gemma":[0.0004923612,0.00032092928,0.0003084693,0.00018651709,0.0001248058,0.000051390518,0.00030599814,0.00009429367,0.9981153],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99939275,0.000036728594,0.000050578594,0.00019626849,0.00018407288,0.00013959511],"domain_scores_gemma":[0.99795353,0.0004813182,0.00013409785,0.00016920255,0.0003980671,0.0008637674],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009360572,0.0031891158,0.0017301076,0.0026532717,0.0020057564,0.0033788772,0.0028251666,0.0060297716,0.9860881],"category_scores_gemma":[0.0012810066,0.00092028815,0.0015749459,0.0018369447,0.0015769101,0.004251776,0.0027051896,0.0029922242,0.98939824],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005018913,0.00036609007,0.0006839166,0.0008040954,0.000043005683,0.0002853286,0.00008564063,0.00041033648,0.0036436825,0.0040784064,0.3059136,0.6831841],"study_design_scores_gemma":[0.000077028046,0.00017938497,0.0009427805,0.00034579862,0.000014922161,0.00042847628,0.000093978946,0.00016529641,0.000612364,0.0005764619,0.9965396,0.000023975452],"about_ca_topic_score_codex":0.0028052041,"about_ca_topic_score_gemma":0.0025010626,"teacher_disagreement_score":0.013911903,"about_ca_system_score_codex":0.0010388022,"about_ca_system_score_gemma":0.0010730482,"threshold_uncertainty_score":0.019843638},"labels":[],"label_agreement":null},{"id":"W4407031185","doi":"10.1097/01.ccm.0001105204.36265.a1","title":"1635: INCIDENCE OF ENDOTOXIC SEPTIC SHOCK IN THE US AND CANADA","year":2025,"lang":"en","type":"article","venue":"Critical Care Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Septic shock; Endotoxic shock; Incidence (geometry); Shock (circulatory); Intensive care medicine; Internal medicine; Sepsis","score_opus":0.00626764796807706,"score_gpt":0.2681775501286279,"score_spread":0.2619099021605508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407031185","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96593064,0.0026141878,0.00029693535,0.0013897736,0.00011902263,0.00007437507,0.020976292,0.00006344641,0.008535391],"genre_scores_gemma":[0.9922317,0.0013126462,0.00016289216,0.0003664403,0.0000235016,0.000015748057,0.0033146509,0.000018614805,0.0025537778],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988103,0.00006252635,0.00009636347,0.00016768815,0.0004204963,0.00044269147],"domain_scores_gemma":[0.9971608,0.00007666494,0.0005348792,0.000046575133,0.0011725151,0.0010085613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035518577,0.0004737825,0.0005032435,0.0028837589,0.0020763949,0.0016343427,0.0018032659,0.0011562956,0.005967144],"category_scores_gemma":[0.0020582713,0.00045437075,0.0010135402,0.0064924173,0.0005981178,0.0004757969,0.001187631,0.0010337397,0.000494781],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009538959,0.000026921398,0.99307716,0.00003499418,0.000084430496,0.00021793223,0.00018808016,0.0001923438,0.00019517164,0.00024132656,0.0025922507,0.0030538891],"study_design_scores_gemma":[0.000010624761,0.000019402318,0.9963909,0.00004489376,0.000025978105,0.00026504463,0.0013221198,0.00046340137,0.000047571895,0.000050153634,0.0013414355,0.000018364963],"about_ca_topic_score_codex":0.994009,"about_ca_topic_score_gemma":0.9950847,"teacher_disagreement_score":0.026578529,"about_ca_system_score_codex":0.026578529,"about_ca_system_score_gemma":0.03934634,"threshold_uncertainty_score":0.19284165},"labels":[],"label_agreement":null},{"id":"W4407262016","doi":"10.3389/fimmu.2024.1505008","title":"CD109, a master regulator of inflammatory responses","year":2025,"lang":"en","type":"review","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; McGill University","keywords":"Master regulator; Regulator; Medicine; Immunology; Biology; Genetics; Transcription factor","score_opus":0.015657732872732973,"score_gpt":0.2630971416846714,"score_spread":0.24743940881193843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407262016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00033515287,0.9960866,0.00023788777,0.00047633375,0.00045731987,0.0000066061343,0.000033174438,0.0000192245,0.002347745],"genre_scores_gemma":[0.0023205858,0.9945528,0.00021408197,0.00040873754,0.0003896784,0.000011020642,0.00007205501,0.0000027170543,0.0020284005],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998957,0.000014929028,0.000012824881,0.000019284033,0.00004245687,0.000014740303],"domain_scores_gemma":[0.9999157,0.000027227465,0.000013149363,0.0000027661101,0.000023652678,0.000017574412],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024776737,0.000655622,0.00070578046,0.0009396725,0.000190385,0.0007063861,0.0004428498,0.00068136683,0.0018945608],"category_scores_gemma":[0.00030670973,0.00015261896,0.00018887417,0.00079758605,0.00035299174,0.00074819836,0.0004981229,0.0015796144,0.0019549234],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011663674,0.000045420275,0.00023950891,0.0069987383,0.00004060768,0.00022019609,0.00005136259,0.00022308955,0.008737375,0.0069362354,0.047268797,0.92912215],"study_design_scores_gemma":[0.000010348707,0.00005354958,0.00060157536,0.00061754126,0.000021360558,0.0007258156,0.00002081792,0.00004363534,0.0010760019,0.0011990877,0.995622,0.000008273078],"about_ca_topic_score_codex":0.00038352166,"about_ca_topic_score_gemma":0.00057411654,"teacher_disagreement_score":0.0018945608,"about_ca_system_score_codex":0.00045527465,"about_ca_system_score_gemma":0.000619805,"threshold_uncertainty_score":0.0063379407},"labels":[],"label_agreement":null},{"id":"W4407748267","doi":"10.3390/vetsci12020186","title":"Differential Expression of Key Immune Markers in the Intestinal Tract of Developing Chick Embryos","year":2025,"lang":"en","type":"article","venue":"Veterinary Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Food and Agriculture; South Carolina Department of Agriculture; Clemson University; U.S. Department of Agriculture","keywords":"Biology; Immune system; Cecum; Innate immune system; Embryo; Immunology; Immunity; Gene expression; Chemokine; Interleukin 22; Gene; Cell biology; Cytokine; Interleukin; Genetics","score_opus":0.024838461056567646,"score_gpt":0.2849085770195061,"score_spread":0.2600701159629385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407748267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951668,0.0015772491,0.0012728642,0.000017668623,0.000008227243,0.000013731601,0.0006894652,0.000014870443,0.0012392001],"genre_scores_gemma":[0.99220544,0.0014644159,0.00291664,0.000048021247,0.0000046006253,0.000045681307,0.00082744355,0.000015375923,0.0024724277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992347,0.000006966155,0.000008332706,0.000027103633,0.000015936928,0.000018170245],"domain_scores_gemma":[0.9998441,0.000039276554,0.00004198368,0.000008581337,0.00003417177,0.00003188095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000097364005,0.00016262705,0.00017767718,0.0004253531,0.000118052296,0.00032594506,0.0000756253,0.00018288275,0.0006150576],"category_scores_gemma":[0.00019543807,0.00017816102,0.00014921748,0.00015910203,0.00016721131,0.00017560486,0.00013972624,0.0003885855,0.00017203827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022021396,0.000005490623,0.004349997,0.000045397894,0.0000052513597,0.00009813972,0.00010134002,0.000047307785,0.9931457,0.000056455658,0.0000149735915,0.0019098113],"study_design_scores_gemma":[0.000011894297,0.0006581378,0.5498977,0.00004858631,0.000055103672,0.0005212416,0.0005726062,0.0005941721,0.44517565,0.00009760856,0.0023483718,0.0000189736],"about_ca_topic_score_codex":0.0016993118,"about_ca_topic_score_gemma":0.0023447727,"teacher_disagreement_score":0.0016993118,"about_ca_system_score_codex":0.00028147962,"about_ca_system_score_gemma":0.00017999041,"threshold_uncertainty_score":0.003378868},"labels":[],"label_agreement":null},{"id":"W4407941138","doi":"10.3389/fmicb.2025.1540534","title":"Determining the Bordetella LPS structural features that influence TLR4 downstream signaling","year":2025,"lang":"en","type":"article","venue":"Frontiers in Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Downstream (manufacturing); TLR4; Cell biology; Signal transduction; Biology; Microbiology; Chemistry; Computational biology; Business","score_opus":0.003911819079433438,"score_gpt":0.22292989335420768,"score_spread":0.21901807427477424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407941138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987035,0.00019143446,0.0004708423,0.00003286255,0.00000750416,0.000012343747,0.00011071001,0.0000081705075,0.00046265],"genre_scores_gemma":[0.9977164,0.0002654198,0.0013537576,0.000042237905,0.0000048476104,0.000026368763,0.00022577652,0.000009688321,0.00035544622],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981445,0.00005052664,0.000017311713,0.000025059822,0.000042269767,0.00005040949],"domain_scores_gemma":[0.9998425,0.000029603012,0.00005836251,0.000012898356,0.000022592461,0.000033933677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019718427,0.000323006,0.00017728763,0.00014920138,0.000105033105,0.00035901717,0.0001369111,0.00026253128,0.00058719335],"category_scores_gemma":[0.00026114972,0.00015989896,0.00015907017,0.00016937022,0.00018418682,0.00019941972,0.00016591899,0.0003756441,0.00021959087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012287538,0.00002481208,0.00026081502,0.000015843878,0.0000027093715,0.00001702511,0.0000063473776,0.00007726069,0.9991873,0.0000278047,0.000008227397,0.00024892294],"study_design_scores_gemma":[0.000011339851,0.00032122957,0.0042710914,0.000005301072,0.000016431364,0.000053573203,0.000031785385,0.0006045917,0.9941129,0.000019473631,0.00054565846,0.0000065676986],"about_ca_topic_score_codex":0.00050801097,"about_ca_topic_score_gemma":0.0008008242,"teacher_disagreement_score":0.00058719335,"about_ca_system_score_codex":0.00028799323,"about_ca_system_score_gemma":0.00026754275,"threshold_uncertainty_score":0.00208956},"labels":[],"label_agreement":null},{"id":"W4407952683","doi":"10.1016/j.vetmic.2025.110446","title":"Mycoplasma ovipnuemoniae impairs the immune response of sheep and suppresses neutrophil function by inhibiting S100A9","year":2025,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"","keywords":"Biology; Immune system; S100A9; Mycoplasma; Microbiology; Immunology; Function (biology); Inflammation; Cell biology","score_opus":0.006645220506176997,"score_gpt":0.22206118105841957,"score_spread":0.21541596055224257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407952683","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979479,0.0008031822,0.0004206482,0.00008122136,0.000035691202,0.000014551749,0.00006120308,0.000024296287,0.0006113689],"genre_scores_gemma":[0.9968549,0.00045209363,0.00072694174,0.00006549464,0.000024219318,0.00002113071,0.00012443833,0.00000648989,0.0017243171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982065,0.00004672966,0.00001537402,0.000023034389,0.000044417353,0.00004973782],"domain_scores_gemma":[0.9998479,0.000027933975,0.000052494674,0.000015143256,0.000013843772,0.000042724696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018993515,0.0002794642,0.0002764751,0.00015674005,0.00012110816,0.00021391263,0.00018292635,0.00045318206,0.0009405064],"category_scores_gemma":[0.000231113,0.000121287754,0.00015188885,0.000055885244,0.00022055105,0.00011875423,0.00015470303,0.00048413256,0.00023918919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00068925356,0.000109143824,0.00038662975,0.000035075747,0.000004215229,0.00007327143,0.00001646919,0.000018682817,0.9969432,0.000041084506,0.000035684385,0.0016473015],"study_design_scores_gemma":[0.000119673794,0.006717358,0.023018781,0.000030391597,0.000028511491,0.0007560964,0.000117876756,0.00081562094,0.9650707,0.00010224838,0.0032140454,0.000008685436],"about_ca_topic_score_codex":0.00033922095,"about_ca_topic_score_gemma":0.0006395668,"teacher_disagreement_score":0.0009405064,"about_ca_system_score_codex":0.00011010941,"about_ca_system_score_gemma":0.00018114671,"threshold_uncertainty_score":0.0031462908},"labels":[],"label_agreement":null},{"id":"W4408164934","doi":"10.1016/j.jcmgh.2025.101491","title":"Attenuating ABHD17 Isoforms Augments the S-acylation and Function of NOD2 and a Subset of Crohn’s Disease-associated NOD2 Variants","year":2025,"lang":"en","type":"article","venue":"Cellular and Molecular Gastroenterology and Hepatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; St. Michael's Hospital","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Cancer Institute; Kenneth Rainin Foundation; Dalhousie Medical Research Foundation","keywords":"NOD2; Crohn's disease; Gene isoform; Acylation; Disease; Medicine; Function (biology); Biology; Genetics; Internal medicine; Gene; Biochemistry","score_opus":0.005028225741499078,"score_gpt":0.20336244368389814,"score_spread":0.19833421794239905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408164934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99858993,0.0003862456,0.00058294536,0.00003311694,0.000017170589,0.0000122240535,0.00011489018,0.000026611071,0.00023694248],"genre_scores_gemma":[0.9969674,0.0003421378,0.0010887659,0.00004512269,0.000009440748,0.00002806315,0.00037858493,0.000021966247,0.0011186826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998441,0.000026035665,0.000020610289,0.000029853454,0.000033273234,0.000046121884],"domain_scores_gemma":[0.9997793,0.000038361923,0.000067803965,0.000021481443,0.000021193106,0.000071832015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019169982,0.00034519972,0.0002964078,0.00017894042,0.00010579061,0.0002489169,0.00013905927,0.00018200581,0.0013547093],"category_scores_gemma":[0.00013471617,0.00010756567,0.00021463177,0.000119596756,0.00023652948,0.000111935056,0.00016055608,0.00052551116,0.0002640915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022808803,0.000038762075,0.00043601746,0.00002327745,0.0000056856084,0.00007209529,0.0000069689045,0.00003660412,0.99852246,0.00002278594,0.00002365748,0.00058360666],"study_design_scores_gemma":[0.000044054763,0.00072362344,0.008969037,0.0000068353675,0.000033681747,0.00068879995,0.00004578717,0.0007801874,0.9864136,0.000027404069,0.002262567,0.000004425497],"about_ca_topic_score_codex":0.0002932305,"about_ca_topic_score_gemma":0.00047065722,"teacher_disagreement_score":0.0013547093,"about_ca_system_score_codex":0.00019801872,"about_ca_system_score_gemma":0.0001518538,"threshold_uncertainty_score":0.0045319796},"labels":[],"label_agreement":null},{"id":"W4408272815","doi":"10.21203/rs.3.rs-6122641/v1","title":"Rehydration rescues Il22-/- mice from lethal Citrobacter rodentium infection","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"Wellcome Trust","keywords":"Citrobacter rodentium; Citrobacter; Microbiology; Biology; Enterobacteriaceae; Escherichia coli; Pathogen; Genetics","score_opus":0.03985029715838519,"score_gpt":0.36600985727624347,"score_spread":0.3261595601178583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408272815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9826438,0.0024120503,0.0054875347,0.00085529365,0.00045478856,0.00018153944,0.002797651,0.0010574765,0.004109852],"genre_scores_gemma":[0.9713892,0.0011018349,0.007663674,0.00040500835,0.0001165938,0.00015650915,0.0021648898,0.0006383372,0.01636392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954563,0.000059690137,0.000044675162,0.00011318624,0.00010820059,0.0001285496],"domain_scores_gemma":[0.9996189,0.000033137912,0.00012461543,0.00005584554,0.00001997501,0.00014748982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025769052,0.0012078194,0.00069512014,0.00072158995,0.00025400645,0.0004983964,0.00070769934,0.0010599783,0.0040878155],"category_scores_gemma":[0.00024728003,0.00039700945,0.00060376286,0.00022033877,0.00065479864,0.00054020155,0.0004965537,0.0019305154,0.0016291869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050140655,0.00011318956,0.00007601189,0.000049284223,0.0000067577785,0.00012579864,0.000013946667,0.000052434774,0.99763703,0.0000939526,0.00015247046,0.001177805],"study_design_scores_gemma":[0.0000833409,0.0005930993,0.0033966852,0.00002228004,0.00002280011,0.00051535986,0.00006742082,0.0005316152,0.9917671,0.00012945542,0.002859262,0.000011468869],"about_ca_topic_score_codex":0.00065881456,"about_ca_topic_score_gemma":0.0010104442,"teacher_disagreement_score":0.0040878155,"about_ca_system_score_codex":0.00029251736,"about_ca_system_score_gemma":0.00023767515,"threshold_uncertainty_score":0.013675094},"labels":[],"label_agreement":null},{"id":"W4408345274","doi":"10.1159/000544989","title":"Targeted Rapid Endotoxin Adsorption (TREA): can we bring precision medicine to sepsis?","year":2025,"lang":"en","type":"review","venue":"Blood Purification","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tornado Spectral Systems (Canada)","funders":"","keywords":"Hemofiltration; Sepsis; Septic shock; Medicine; Intensive care medicine; Extracorporeal; Immunology; Hemodialysis; Internal medicine","score_opus":0.02620430932972118,"score_gpt":0.2969591398286553,"score_spread":0.2707548304989341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408345274","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023020979,0.7492091,0.007094241,0.22232625,0.013516225,0.000040171628,0.00018130832,0.00033300286,0.0049975757],"genre_scores_gemma":[0.033405084,0.84352505,0.00898735,0.08785315,0.021091875,0.00013945597,0.00022849687,0.00009700129,0.0046725734],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99811184,0.0005636183,0.00014205779,0.00026667558,0.00059509074,0.00032081862],"domain_scores_gemma":[0.9918921,0.004390983,0.00072929583,0.00043612186,0.0015502548,0.001001166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0069691497,0.0010669769,0.0017845928,0.0011438826,0.0009094515,0.0049585714,0.0017118312,0.006990089,0.010007418],"category_scores_gemma":[0.011734975,0.0003584522,0.0012204192,0.0009848942,0.004837454,0.0089137675,0.0026310608,0.010116077,0.0043405127],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010461075,0.00044169778,0.0017440622,0.0063339197,0.00025264165,0.00070076046,0.00060942955,0.0010055703,0.0052075502,0.081080824,0.19434853,0.70722896],"study_design_scores_gemma":[0.00021342319,0.001298818,0.0014115933,0.0051180306,0.00019485514,0.0012322003,0.00092058454,0.0010620862,0.0033154609,0.12320752,0.86186385,0.00016152242],"about_ca_topic_score_codex":0.00092298456,"about_ca_topic_score_gemma":0.0010548547,"teacher_disagreement_score":0.010007418,"about_ca_system_score_codex":0.0014865672,"about_ca_system_score_gemma":0.0035468843,"threshold_uncertainty_score":0.03685683},"labels":[],"label_agreement":null},{"id":"W4408402627","doi":"10.1371/journal.pone.0319404","title":"Evaluating the protective effects of the Toll-like receptor (TLR) 21 ligand, CpG ODN, against necrotic enteritis in broiler chickens","year":2025,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Canadian Animal Health Institute; McMaster University; University of Guelph","funders":"","keywords":"Broiler; Clostridium perfringens; Ileum; Jejunum; Biology; CpG Oligodeoxynucleotide; CD163; Immune system; Lymphocyte; Immunology; Internal medicine; Andrology; Gene expression; Medicine; Endocrinology; DNA methylation; Gene; Animal science","score_opus":0.02069260928643453,"score_gpt":0.2516409036602151,"score_spread":0.23094829437378056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408402627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988576,0.00053372345,0.0002389749,0.000030658,0.00001507152,0.00001891299,0.00006154439,0.0000066468388,0.0002368704],"genre_scores_gemma":[0.9964856,0.0008794909,0.0012880337,0.00007018027,0.000010904864,0.00003930979,0.0001813919,0.0000038804474,0.0010411618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999056,0.000017261227,0.000010337923,0.00002340148,0.000019536137,0.000023772222],"domain_scores_gemma":[0.9998938,0.000016533406,0.00002999003,0.000004592396,0.000019015613,0.00003600791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015449148,0.00032193336,0.00025956577,0.00018145322,0.00011286075,0.00015076179,0.00009092778,0.00029457212,0.00042080923],"category_scores_gemma":[0.00011732911,0.000112159956,0.0002025506,0.00006005641,0.00017529956,0.00015849243,0.000092918905,0.00031402544,0.000099703015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00050434796,0.0001190462,0.0003607619,0.000060495488,0.0000039108377,0.000016034615,0.000015624579,0.000034058226,0.9978332,0.000005256824,0.000010499224,0.0010368704],"study_design_scores_gemma":[0.000100294455,0.021223018,0.032397546,0.000030518877,0.00008854618,0.00022352918,0.0002153642,0.0007512506,0.94336075,0.000029414194,0.0015647667,0.000015006172],"about_ca_topic_score_codex":0.0005351224,"about_ca_topic_score_gemma":0.0009872862,"teacher_disagreement_score":0.0005351224,"about_ca_system_score_codex":0.00012665198,"about_ca_system_score_gemma":0.00015335462,"threshold_uncertainty_score":0.0014077425},"labels":[],"label_agreement":null},{"id":"W4408403244","doi":"10.1152/ajpcell.00124.2025","title":"Interleukin-10 resistance in type 2 diabetes is associated with defective STAT3 signaling in human blood leukocytes","year":2025,"lang":"en","type":"article","venue":"American Journal of Physiology-Cell Physiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts","keywords":"SOCS3; Cytokine; CD14; Immunology; Endocrinology; Inflammation; Internal medicine; Signal transduction; Lipopolysaccharide; STAT3; Peripheral blood mononuclear cell; Biology; Medicine; Flow cytometry; Cell biology","score_opus":0.004395443505020093,"score_gpt":0.22293143704513993,"score_spread":0.21853599354011985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408403244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9971553,0.00067679596,0.0010401887,0.00008639127,0.000016283946,0.00001089275,0.00046126655,0.000041575815,0.00051129865],"genre_scores_gemma":[0.9980082,0.00028590366,0.0005288061,0.000056615434,0.000011754311,0.00001462591,0.00059852336,0.000011012959,0.00048453303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982697,0.00003351262,0.000024672136,0.000039402505,0.000035041936,0.000040462815],"domain_scores_gemma":[0.9998305,0.000026343663,0.00005717026,0.000025269257,0.000013837433,0.000046812147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021335045,0.0002584333,0.0002063774,0.0004943513,0.00012462829,0.00048322981,0.00011767185,0.0002846414,0.0020959207],"category_scores_gemma":[0.00026471948,0.00014384752,0.0002739159,0.00037112655,0.00022180263,0.00010809511,0.00022924514,0.00055378804,0.0005199569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019523043,0.00009508739,0.019599866,0.000058939608,0.000025594863,0.00069530774,0.000069658694,0.00010043181,0.97215796,0.00011253258,0.00016457918,0.004967655],"study_design_scores_gemma":[0.00030953533,0.0012857901,0.53959167,0.00003979275,0.00017939157,0.013701727,0.0003706642,0.0028947692,0.43695077,0.0005519524,0.0040933974,0.000030610594],"about_ca_topic_score_codex":0.0006958138,"about_ca_topic_score_gemma":0.000454648,"teacher_disagreement_score":0.0020959207,"about_ca_system_score_codex":0.00013937455,"about_ca_system_score_gemma":0.00014742742,"threshold_uncertainty_score":0.007011533},"labels":[],"label_agreement":null},{"id":"W4408550103","doi":"10.1111/pde.15826","title":"Reactive Infectious Mucocutaneous Eruption Associated With <i>Klebsiella pneumoniae</i>","year":2025,"lang":"en","type":"article","venue":"Pediatric Dermatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Hard rime; Klebsiella pneumoniae; Mucocutaneous zone; Immunology; Urinary system; Dermatology; Pathology; Internal medicine; Disease; Biology","score_opus":0.0033048808839307793,"score_gpt":0.20631994679743182,"score_spread":0.20301506591350105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408550103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750983,0.0059419936,0.0024609216,0.00074244186,0.00009345804,0.00007264788,0.00015140137,0.00024597193,0.015192874],"genre_scores_gemma":[0.9974874,0.000993271,0.00057394034,0.0002452072,0.00005967344,0.0000061279793,0.00003282125,0.000013126579,0.000588325],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9997639,0.00004401942,0.0000213744,0.00005851324,0.000038564955,0.000073593474],"domain_scores_gemma":[0.9995136,0.00013426034,0.00020654165,0.00002776994,0.000027458296,0.00009045477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016945535,0.00063576846,0.000518979,0.00043975218,0.00046439935,0.0004510586,0.0002513432,0.000842062,0.0014055824],"category_scores_gemma":[0.00094759243,0.0002842525,0.00030117173,0.0002936255,0.000514241,0.00049703533,0.00042287598,0.000929365,0.00044212196],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086110085,0.000084713814,0.052842665,0.00016294092,0.000020817924,0.9227761,0.00039790254,0.00011149139,0.014929104,0.00031962825,0.00076122774,0.0075072357],"study_design_scores_gemma":[0.000008942237,0.00012026872,0.02891885,0.000025198613,0.000014508125,0.9666585,0.00014311346,0.00011959413,0.0018031253,0.000056098692,0.0021245808,0.0000072448915],"about_ca_topic_score_codex":0.0007604166,"about_ca_topic_score_gemma":0.00088472734,"teacher_disagreement_score":0.0014055824,"about_ca_system_score_codex":0.0002823292,"about_ca_system_score_gemma":0.00020052673,"threshold_uncertainty_score":0.0047022104},"labels":[],"label_agreement":null},{"id":"W4408564583","doi":"10.1016/j.isci.2025.112243","title":"Neonatal gut microbiota succession in mice mapped over time, site, injury and single immunoglobulin interleukin-1 related receptor genotype","year":2025,"lang":"en","type":"article","venue":"iScience","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Foundation for Science and Technology Development; National Institutes of Health; National Science Foundation","keywords":"Genotype; Ecological succession; Gut flora; Antibody; Biology; Receptor; Immunology; Genetics; Gene; Ecology","score_opus":0.0037299765768119123,"score_gpt":0.22532661185590958,"score_spread":0.22159663527909768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408564583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99652725,0.0002664989,0.0011873681,0.000057210458,0.000010155012,0.000016884951,0.0012756056,0.0000694418,0.000589556],"genre_scores_gemma":[0.99146265,0.0003604087,0.002720871,0.00015809548,0.0000074392024,0.00009138651,0.0015873235,0.00009408595,0.003517746],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997588,0.00003578319,0.000019812605,0.00007585906,0.00004365298,0.00006616249],"domain_scores_gemma":[0.9996314,0.000025146726,0.00016077452,0.00002947384,0.00003145887,0.00012169358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022352417,0.00032966677,0.00025880712,0.0006564642,0.00015858888,0.00032188458,0.00017166088,0.00034605726,0.0015481064],"category_scores_gemma":[0.00016229168,0.00024448746,0.00027399193,0.00025198483,0.00034627228,0.00027970437,0.00027963237,0.00084244966,0.00039204553],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007669763,0.000068343295,0.006063253,0.000024341074,0.0000096437,0.00007197607,0.000054718188,0.00006251302,0.9906769,0.00005358196,0.000080330035,0.0020674497],"study_design_scores_gemma":[0.00005077005,0.0025057707,0.3654211,0.000034373807,0.00007929802,0.0015386852,0.00046860657,0.001191409,0.6261343,0.00020060956,0.0023374332,0.000037659574],"about_ca_topic_score_codex":0.00091380614,"about_ca_topic_score_gemma":0.0015656404,"teacher_disagreement_score":0.0015481064,"about_ca_system_score_codex":0.00032735264,"about_ca_system_score_gemma":0.00020012486,"threshold_uncertainty_score":0.0051789284},"labels":[],"label_agreement":null},{"id":"W4408622490","doi":"10.1007/s00018-025-05631-x","title":"Role of TLRs as signaling cascades to combat infectious diseases: a review","year":2025,"lang":"en","type":"review","venue":"Cellular and Molecular Life Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Signal transduction; Biology; Infectious disease (medical specialty); Neuroscience; Immunology; Virology; Computational biology; Cell biology; Medicine; Disease; Pathology","score_opus":0.010047861736729226,"score_gpt":0.28581292821394505,"score_spread":0.2757650664772158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408622490","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012700791,0.99797064,0.00016760312,0.0002965895,0.00032615205,0.0000048853426,0.0000204557,0.000011340567,0.0010753635],"genre_scores_gemma":[0.0004813568,0.99841535,0.0001968494,0.00018135014,0.00020715717,0.0000051912143,0.000029381104,0.0000014140638,0.0004818476],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999871,0.000022529286,0.000018655504,0.0000228572,0.00004980963,0.00001504256],"domain_scores_gemma":[0.99975044,0.00011265971,0.000033811615,0.0000071935756,0.00006107669,0.000034803365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004017119,0.00078297267,0.0009644525,0.0019726981,0.000251974,0.00087415864,0.0007362134,0.0008990955,0.004591008],"category_scores_gemma":[0.0005830489,0.00021089714,0.0004213475,0.0017721293,0.0003053926,0.0013563359,0.0005920082,0.001462488,0.002501962],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007819273,0.00007451815,0.00015254697,0.019805528,0.00008555902,0.00019421556,0.00006319957,0.00030220582,0.0027460996,0.0034034585,0.04007651,0.93301797],"study_design_scores_gemma":[0.000009663342,0.000084904306,0.00042569524,0.0026631758,0.000083353,0.0008010975,0.000040427836,0.000055660905,0.0003660554,0.0012583083,0.99419916,0.000012566144],"about_ca_topic_score_codex":0.0004390041,"about_ca_topic_score_gemma":0.00077561376,"teacher_disagreement_score":0.004591008,"about_ca_system_score_codex":0.0004426837,"about_ca_system_score_gemma":0.0009858491,"threshold_uncertainty_score":0.015358508},"labels":[],"label_agreement":null},{"id":"W4408742059","doi":"10.1101/2025.03.20.644388","title":"Biophysical characterization of Eag chaperones suggests the mechanism of effector transmembrane domain release","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Manitoba","funders":"","keywords":"Effector; Mechanism (biology); Domain (mathematical analysis); Transmembrane protein; Characterization (materials science); Transmembrane domain; Cell biology; Chemistry; Biophysics; Computational biology; Biology; Biochemistry; Nanotechnology; Materials science; Physics; Membrane; Receptor; Mathematics","score_opus":0.005837174479853321,"score_gpt":0.19795889544479936,"score_spread":0.19212172096494604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408742059","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942068,0.00049369317,0.0042238273,0.000122129,0.000015869984,0.00000984195,0.00028410935,0.00006429612,0.000579281],"genre_scores_gemma":[0.9970907,0.00015399384,0.0015239017,0.000052045263,0.0000044610997,0.000010451765,0.00045614946,0.0000127445255,0.0006954116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989355,0.000015904841,0.0000065297186,0.000028192531,0.000032224343,0.00002357399],"domain_scores_gemma":[0.99987876,0.00002596342,0.00002783806,0.00001555778,0.000028701692,0.00002304588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018298705,0.00019296941,0.00017475133,0.00012983408,0.00016913249,0.00029645694,0.00027409694,0.00027531848,0.00083411054],"category_scores_gemma":[0.00027589052,0.00009289331,0.00017709467,0.00018520492,0.0001980716,0.00018798572,0.00011915269,0.0005426552,0.0002720607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007112567,0.000025624318,0.00081601174,0.00001976151,0.0000041933476,0.000032755506,0.000017873565,0.00021816988,0.99755055,0.0002391824,0.000090543464,0.0009142246],"study_design_scores_gemma":[0.000016278877,0.00013069427,0.010216926,0.0000061320025,0.000007943683,0.00016894717,0.00003076484,0.008550698,0.9790493,0.00024334058,0.0015669059,0.000012118033],"about_ca_topic_score_codex":0.00052160275,"about_ca_topic_score_gemma":0.0003954907,"teacher_disagreement_score":0.00083411054,"about_ca_system_score_codex":0.00035762583,"about_ca_system_score_gemma":0.0001085819,"threshold_uncertainty_score":0.0027903914},"labels":[],"label_agreement":null},{"id":"W4408806016","doi":"10.14740/wjon2532","title":"Tumor Necrosis Factor-Alpha and Its Association With Breast Cancer: A Systematic Review","year":2025,"lang":"en","type":"review","venue":"World Journal of Oncology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Breast cancer; Tumor necrosis factor alpha; Oncology; Cancer; Internal medicine","score_opus":0.016007715055195822,"score_gpt":0.3144825664929265,"score_spread":0.29847485143773067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408806016","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013236827,0.9975569,0.00009057711,0.00018544974,0.00007816528,0.00018167161,0.00040964154,0.00000530024,0.00016848472],"genre_scores_gemma":[0.020567596,0.97766876,0.00039694636,0.00038581126,0.00007485758,0.00047730602,0.0003137817,0.000004270252,0.000110737674],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99502784,0.0015352473,0.0019848319,0.00039860897,0.0008718135,0.00018162678],"domain_scores_gemma":[0.977517,0.015129152,0.0049471594,0.00032419458,0.0018430868,0.00023936092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047514415,0.0011569875,0.006135079,0.0072396216,0.0005688084,0.002007075,0.0013532639,0.0015375371,0.0038782232],"category_scores_gemma":[0.027519424,0.0008129826,0.0059667677,0.009976499,0.00064122933,0.0013428144,0.0010941577,0.00083444436,0.0003024349],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016262238,0.000010093202,0.0015626345,0.9742361,0.009086829,0.0000951489,0.000107376894,0.00006686069,0.00011548304,0.00010197935,0.0010282105,0.013426696],"study_design_scores_gemma":[0.0002506227,0.0002170649,0.009586496,0.85386294,0.120521516,0.0006327175,0.00023591088,0.00010765514,0.00018331192,0.00026503313,0.014094328,0.000042470783],"about_ca_topic_score_codex":0.0094919875,"about_ca_topic_score_gemma":0.025004318,"teacher_disagreement_score":0.0094919875,"about_ca_system_score_codex":0.0027542138,"about_ca_system_score_gemma":0.00951473,"threshold_uncertainty_score":0.025128365},"labels":[],"label_agreement":null},{"id":"W4409723337","doi":"10.1093/jleuko/qiaf050","title":"No-lyse no-wash flow cytometry method for ex vivo study of human neutrophils","year":2025,"lang":"en","type":"article","venue":"Journal of Leukocyte Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"European Commission; BC Children's Hospital","keywords":"Biology; Flow cytometry; Ex vivo; Whole blood; Immune system; Immunology; Annexin A5; Andrology; Population; Cytometry; Annexin; In vitro; Biochemistry; Medicine","score_opus":0.01778108028524154,"score_gpt":0.34191835253963915,"score_spread":0.3241372722543976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409723337","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2654571,0.008978975,0.70359707,0.001613245,0.0010253637,0.001880755,0.0040150257,0.0021213049,0.011311176],"genre_scores_gemma":[0.45983487,0.008335988,0.49361274,0.001531657,0.0002765083,0.0073256027,0.007147864,0.0002187899,0.021715948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99955004,0.00008832192,0.00004710309,0.0001353383,0.00012542545,0.000053701617],"domain_scores_gemma":[0.99981385,0.00004472484,0.000035545876,0.000033635646,0.000049860577,0.000022445436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006586142,0.000706211,0.0004181052,0.00049610593,0.00033117976,0.0003565613,0.0006094705,0.00062188046,0.003939121],"category_scores_gemma":[0.00040433827,0.00020624523,0.00024000175,0.00032887826,0.00025119015,0.00041723184,0.0003065273,0.0010618591,0.0013247682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001250758,0.00009338354,0.00030388133,0.00012964143,0.000007826495,0.00004698679,0.000030134932,0.00013416934,0.99052644,0.00049752626,0.0007360766,0.00736891],"study_design_scores_gemma":[0.000049169616,0.00044998512,0.0028773928,0.0000406555,0.000027554706,0.00041321045,0.000024722502,0.005269541,0.9723069,0.00048366445,0.018032007,0.000025108135],"about_ca_topic_score_codex":0.0003554622,"about_ca_topic_score_gemma":0.00088786375,"teacher_disagreement_score":0.003939121,"about_ca_system_score_codex":0.00024992807,"about_ca_system_score_gemma":0.00037359132,"threshold_uncertainty_score":0.013177693},"labels":[],"label_agreement":null},{"id":"W4410472330","doi":"10.1016/j.actbio.2025.05.034","title":"A Chitosan-based Hydrogel to Modulate Immune Cells and Promote Periodontitis Healing in the High-Fat Diet-induced Periodontitis Rat Model","year":2025,"lang":"en","type":"article","venue":"Acta Biomaterialia","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Faculty of Dentistry, University of Toronto; University of Toronto; Financiadora de Estudos e Projetos; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Universidade Estadual Paulista; American Association of Endodontists Foundation","keywords":"Periodontitis; Inflammation; Immune system; Immunology; Medicine; Cytokine; Cancer research; Internal medicine","score_opus":0.008396623528237375,"score_gpt":0.23132659656653026,"score_spread":0.2229299730382929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410472330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98456895,0.0041591995,0.008796963,0.00019316965,0.00014896988,0.00014307805,0.00051534927,0.00016958821,0.0013047804],"genre_scores_gemma":[0.9831702,0.0026545061,0.0110504,0.00011404993,0.000032743796,0.00014231695,0.00030616557,0.000019823065,0.0025097593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999905,0.000009154119,0.000008109674,0.000022397786,0.000032799984,0.000022507074],"domain_scores_gemma":[0.99992144,0.000007907113,0.000029819967,0.000006097924,0.000011780844,0.000022917593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014855278,0.0004250053,0.00023054848,0.00029983523,0.00009560016,0.000119795004,0.00017949785,0.00034539343,0.0006539103],"category_scores_gemma":[0.00007138204,0.00013922658,0.00036833883,0.00017512748,0.00014495593,0.00023415613,0.000115570234,0.00048319876,0.00013257767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001312649,0.00006341825,0.00003360495,0.000057615634,0.0000055266637,0.000023268833,0.0000049160694,0.000069142916,0.9982357,0.00003145386,0.000029150884,0.0013148859],"study_design_scores_gemma":[0.000058212587,0.0015388847,0.0011573329,0.000008144011,0.00004578305,0.00009295879,0.000010241976,0.0009677213,0.9945093,0.000017950182,0.0015835952,0.000009978033],"about_ca_topic_score_codex":0.0006048653,"about_ca_topic_score_gemma":0.001317811,"teacher_disagreement_score":0.0006539103,"about_ca_system_score_codex":0.00019352237,"about_ca_system_score_gemma":0.00022457218,"threshold_uncertainty_score":0.0021876097},"labels":[],"label_agreement":null},{"id":"W4410513006","doi":"10.3899/jrheum.2025-0390.pv113","title":"TRANSCRIPTOMIC ANALYSIS REVEALS A SYNERGY OF HYDROXYCHLOROQUINE AND GLUCOCORTICOIDS IN MODULATING B CELL-RELATED IMMUNE PROCESSES","year":2025,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Hydroxychloroquine; Medicine; Immune system; Transcriptome; Immunopathology; Immunology; Computational biology; Internal medicine; Genetics; Gene expression; Gene; Coronavirus disease 2019 (COVID-19); Biology; Disease","score_opus":0.0036255180206411076,"score_gpt":0.21500271428843104,"score_spread":0.21137719626778995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410513006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9919556,0.0029021977,0.0014505925,0.00014541709,0.000019634957,0.000017728118,0.0027310168,0.000034178167,0.00074370514],"genre_scores_gemma":[0.9941691,0.0008360894,0.0018653659,0.00014120208,0.000028193379,0.000030406034,0.002168826,0.000011975993,0.0007487235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998041,0.00003116115,0.000009234984,0.00007539125,0.000039447845,0.000040762865],"domain_scores_gemma":[0.999843,0.000042345615,0.000057429064,0.000013213863,0.0000236388,0.000020391823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017589059,0.00015312346,0.00030937366,0.00037362872,0.00018761469,0.00040288348,0.00010579494,0.00023995049,0.0012944248],"category_scores_gemma":[0.00017810702,0.000093424904,0.0002886879,0.00045546825,0.00018475091,0.00013276376,0.00014709952,0.00023296675,0.00025809254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005172464,0.000030212976,0.021886507,0.000111093985,0.000055048506,0.00011702227,0.00007132453,0.00014025379,0.9707643,0.00007167932,0.00017446197,0.0060608503],"study_design_scores_gemma":[0.000034768174,0.00058908376,0.89770865,0.00003910422,0.00017645188,0.0006131337,0.00042736353,0.0021319862,0.09485407,0.0003131018,0.0030935507,0.000018774366],"about_ca_topic_score_codex":0.00058487337,"about_ca_topic_score_gemma":0.001000974,"teacher_disagreement_score":0.0012944248,"about_ca_system_score_codex":0.00018739728,"about_ca_system_score_gemma":0.00016454123,"threshold_uncertainty_score":0.004330337},"labels":[],"label_agreement":null},{"id":"W4410715674","doi":"10.3899/jrheum.2025-0390.pv010","title":"ESTROGEN RECEPTOR ALPHA LOCALIZATION AFFECTS CYTOKINE GENE EXPRESSION AFTER TLR7 AGONISM IN LUPUS-PRONE MALES","year":2025,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; TLR7; Estrogen receptor alpha; Agonism; Systemic lupus erythematosus; Alpha (finance); Estrogen; Estrogen receptor; Endocrinology; Internal medicine; Receptor; Gene expression; Cytokine; Gene; Toll-like receptor; Genetics; Biology; Innate immune system","score_opus":0.005447945923049804,"score_gpt":0.22670457278057576,"score_spread":0.22125662685752595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410715674","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945972,0.000779292,0.00080460124,0.00020567041,0.00008499705,0.000027347167,0.0019514016,0.00006705295,0.0014822511],"genre_scores_gemma":[0.9828576,0.0009423754,0.0008775857,0.00023136116,0.000051732128,0.00014945667,0.0018430871,0.000063605934,0.012983137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99966085,0.000056785382,0.000022180588,0.000100089885,0.00005834896,0.00010170021],"domain_scores_gemma":[0.99964964,0.000037038495,0.00011252188,0.000028757247,0.000021097138,0.00015091737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018169681,0.00029589166,0.00035195227,0.00066362397,0.00018853482,0.0003696155,0.00017569549,0.00045620996,0.0056045433],"category_scores_gemma":[0.00015380126,0.00024749158,0.00047862338,0.00021238557,0.00031859434,0.00019969484,0.00020716345,0.0008861463,0.0014833586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025493698,0.0002749436,0.0011337309,0.00004185504,0.000011258397,0.00020028742,0.000053625437,0.00003479017,0.99368155,0.00009466937,0.0001861263,0.0017377798],"study_design_scores_gemma":[0.00031874585,0.008843515,0.07604061,0.000045171182,0.00013645108,0.0014517354,0.0007089221,0.0006788118,0.9063065,0.0002325334,0.0051970426,0.00003997894],"about_ca_topic_score_codex":0.00037920143,"about_ca_topic_score_gemma":0.00055255106,"teacher_disagreement_score":0.0056045433,"about_ca_system_score_codex":0.00024274146,"about_ca_system_score_gemma":0.0001429846,"threshold_uncertainty_score":0.018749058},"labels":[],"label_agreement":null},{"id":"W4411550156","doi":"10.3389/fcimb.2025.1618339","title":"Specific inflammatory stimuli that engage innate immune sensors induce novel CD103 expression profiles in macrophages","year":2025,"lang":"en","type":"article","venue":"Frontiers in Cellular and Infection Microbiology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada; National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Cell biology; Innate immune system; Biology; Downregulation and upregulation; Macrophage; Immune system; Inflammation; MAPK/ERK pathway; Immunology; Signal transduction; In vitro","score_opus":0.010269227093114968,"score_gpt":0.2205145391984971,"score_spread":0.2102453121053821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952291,0.0010560399,0.0017932324,0.0000750565,0.00002029749,0.000021939537,0.00028100313,0.000037715952,0.0014856094],"genre_scores_gemma":[0.99515414,0.00059375126,0.0018159259,0.00012214424,0.000022133361,0.000049336846,0.00035827115,0.0000129137115,0.0018713732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998223,0.000018816008,0.00001705731,0.000036306315,0.000030480203,0.00007504479],"domain_scores_gemma":[0.9999411,0.000009004087,0.000011789439,0.0000068426743,0.000011379041,0.000019970134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000891638,0.00014670941,0.00022505855,0.00022659654,0.00014344275,0.00028360068,0.00006130191,0.00024096131,0.001235635],"category_scores_gemma":[0.00008335141,0.000118313415,0.00020255949,0.00016506229,0.0001419711,0.00016810576,0.00017566599,0.00044278038,0.00036184146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012828285,0.000017374876,0.00046859853,0.000029206007,0.0000022295053,0.0000962399,0.000027778377,0.000012321573,0.99796534,0.000053815747,0.00003171268,0.001167105],"study_design_scores_gemma":[0.000048954,0.00069499447,0.062178593,0.00003508736,0.000034073604,0.0013003154,0.00049459946,0.0009272259,0.9290495,0.00031807757,0.0049023875,0.000016156717],"about_ca_topic_score_codex":0.0001638839,"about_ca_topic_score_gemma":0.000333369,"teacher_disagreement_score":0.001235635,"about_ca_system_score_codex":0.0001555503,"about_ca_system_score_gemma":0.00011697019,"threshold_uncertainty_score":0.004133582},"labels":[],"label_agreement":null},{"id":"W4411683360","doi":"10.1101/2025.06.24.661302","title":"Rapid genetic diversification of <i>Bacteroides thetaiotaomicron</i> in mono-associated mice revealed through deep population-level sequencing","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Russian Science Foundation; Austrian Science Fund; Universität Wien; Österreichischen Akademie der Wissenschaften; Deutsche Forschungsgemeinschaft","keywords":"Bacteroides thetaiotaomicron; Bacteroides; Diversification (marketing strategy); Biology; Population; Microbiome; Genetics; Bacteria; Environmental health; Medicine; Business","score_opus":0.020589841225111916,"score_gpt":0.21800609698103426,"score_spread":0.19741625575592234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411683360","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99670404,0.00012444559,0.0022650613,0.000043087963,0.0000052509554,0.00000789519,0.0005006671,0.0000563889,0.00029329586],"genre_scores_gemma":[0.99640614,0.00009849403,0.0017358315,0.000091468144,0.0000057081566,0.000026399814,0.00055715826,0.000050624716,0.0010281868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997801,0.000026678052,0.000012498625,0.0000769368,0.000042112923,0.0000616586],"domain_scores_gemma":[0.9996561,0.000028037259,0.00015297293,0.000026792046,0.000024680176,0.00011136429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022526422,0.00026329103,0.00020150596,0.00044866145,0.00015156463,0.00034647484,0.0001740992,0.00032018102,0.00086858333],"category_scores_gemma":[0.00016841124,0.00017698175,0.00027766594,0.00015741643,0.0002738386,0.00014743063,0.00029355864,0.00070648507,0.0002281553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016729132,0.000018501583,0.0039693187,0.000009797371,0.000013273375,0.000036498008,0.00001889981,0.00006908465,0.9946977,0.000050978997,0.000030237085,0.0009183517],"study_design_scores_gemma":[0.00004944277,0.0011751917,0.4653933,0.000029558476,0.00010752822,0.0013504687,0.0003120734,0.0049610096,0.5232488,0.00040619832,0.0029268854,0.0000396278],"about_ca_topic_score_codex":0.000526397,"about_ca_topic_score_gemma":0.00081589643,"teacher_disagreement_score":0.00086858333,"about_ca_system_score_codex":0.0002299908,"about_ca_system_score_gemma":0.00010727804,"threshold_uncertainty_score":0.0029057264},"labels":[],"label_agreement":null},{"id":"W4412190682","doi":"10.5376/amb.2024.14.0037","title":"The Role of TLR Genes in Canid Immunity: Insights from Wolves, Coyotes, and Dogs","year":2024,"lang":"en","type":"article","venue":"Animal Molecular Breeding","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Immunity; Biology; Gene; Zoology; Immunology; Genetics; Immune system","score_opus":0.005586675249019175,"score_gpt":0.20959783714434568,"score_spread":0.2040111618953265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412190682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926569,0.0038188477,0.0007796354,0.000383022,0.000012637749,0.000007556398,0.00015206102,0.000004744768,0.00218458],"genre_scores_gemma":[0.9935143,0.0033946927,0.0009992854,0.0002350994,0.000019396646,0.000012758914,0.00017612298,0.0000045857114,0.0016437302],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99986815,0.000032743083,0.000006670711,0.00003271081,0.000014113145,0.000045576562],"domain_scores_gemma":[0.9998673,0.000033926364,0.000034304874,0.000011398196,0.000023649118,0.000029389508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027424959,0.00022318133,0.00023025787,0.0006296103,0.0003343366,0.00070502283,0.00016524734,0.00041486786,0.0010164096],"category_scores_gemma":[0.00026045745,0.00015478049,0.00015947901,0.00023318453,0.00060837733,0.00040438047,0.00041103718,0.00042154317,0.00011923101],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020920676,0.0002287689,0.33374572,0.00040547916,0.00018777448,0.002107745,0.0028749062,0.0005524449,0.5503618,0.0055430336,0.0010512776,0.10084902],"study_design_scores_gemma":[0.000033269138,0.00066912285,0.9357983,0.00020934723,0.00016654046,0.003870873,0.006983693,0.0010447645,0.034135625,0.0023972027,0.01465821,0.000033029635],"about_ca_topic_score_codex":0.0015493615,"about_ca_topic_score_gemma":0.0038681652,"teacher_disagreement_score":0.0015493615,"about_ca_system_score_codex":0.00020033278,"about_ca_system_score_gemma":0.00020114181,"threshold_uncertainty_score":0.0034002066},"labels":[],"label_agreement":null},{"id":"W4412701577","doi":"10.1097/cce.0000000000001292","title":"Comparative Evaluation of Lipopolysaccharide Administration Methods to Induce Acute Lung Injury in Murine Models: Efficacy, Consistency, and Technical Considerations","year":2025,"lang":"en","type":"article","venue":"Critical Care Explorations","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario; University of Toronto; McGill University Health Centre; St. Michael's Hospital; Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Bronchoalveolar lavage; Lipopolysaccharide; Lung; Context (archaeology); Anesthesia; Evans Blue; Pathology; Internal medicine","score_opus":0.09186971084916902,"score_gpt":0.4428867385121059,"score_spread":0.3510170276629369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412701577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94235027,0.011944621,0.03847531,0.00040391737,0.0005867812,0.003217081,0.0007909691,0.00021861726,0.0020124884],"genre_scores_gemma":[0.9044353,0.012799525,0.072585166,0.00038589633,0.0004911139,0.0052566077,0.0017295654,0.00013104349,0.0021858294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9939334,0.0022021015,0.0012218076,0.0005739706,0.0017688326,0.0002998809],"domain_scores_gemma":[0.99240255,0.0018720401,0.0024285913,0.0011508737,0.0017801925,0.00036579365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00934065,0.0009104992,0.0010547629,0.0014653327,0.00036575596,0.0011742864,0.0008448484,0.00097439514,0.0009899229],"category_scores_gemma":[0.0049966294,0.0003559476,0.00088036846,0.0007758152,0.00083489926,0.000996914,0.0006203183,0.0013432149,0.0003786092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010630653,0.0070908777,0.009070313,0.0015898466,0.00034763248,0.00013456203,0.0003061749,0.0009767314,0.9353816,0.00054346287,0.00027695837,0.033651154],"study_design_scores_gemma":[0.0006790777,0.15677387,0.032884482,0.0003904138,0.0010145688,0.0006492625,0.00035511516,0.00268546,0.7972681,0.0005081318,0.006659638,0.00013192624],"about_ca_topic_score_codex":0.00020537159,"about_ca_topic_score_gemma":0.0004195801,"teacher_disagreement_score":0.00934065,"about_ca_system_score_codex":0.00042009697,"about_ca_system_score_gemma":0.00063810527,"threshold_uncertainty_score":0.04939866},"labels":[],"label_agreement":null},{"id":"W4412725450","doi":"10.1038/s44318-025-00515-z","title":"Macrophages form dendrite-like pseudopods to enhance bacterial ingestion","year":2025,"lang":"en","type":"article","venue":"The EMBO Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China; Science and Technology Commission of Shanghai Municipality; Natural Science Foundation of Shanghai","keywords":"Biology; Pseudopodia; Ingestion; Dendrite (mathematics); Microbiology; Cell biology; Biophysics; Biochemistry; Actin","score_opus":0.005912610383858254,"score_gpt":0.27239391826377124,"score_spread":0.266481307879913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412725450","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97804505,0.0019798912,0.017322477,0.0002075309,0.000055879733,0.00004789356,0.00017396967,0.00019721601,0.0019700134],"genre_scores_gemma":[0.9915264,0.0007611563,0.0053832545,0.00006011663,0.000013450007,0.000032104974,0.00011674547,0.000020590416,0.0020860806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999124,0.000013737658,0.0000040643777,0.00001946725,0.000022098111,0.000028271572],"domain_scores_gemma":[0.9999132,0.000010484192,0.000026515152,0.000011094241,0.000011984231,0.000026684635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012416011,0.00025965486,0.00017721883,0.00016002175,0.00016692298,0.00028387172,0.0001232282,0.00031163025,0.0007340963],"category_scores_gemma":[0.00008694448,0.00011270954,0.00021825497,0.000073337804,0.00018602524,0.00028627377,0.00038444504,0.0004032057,0.0004313345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004755119,0.000008263782,0.00023335958,0.000023654453,0.0000020809775,0.000051390052,0.000014383689,0.00005590608,0.99828327,0.0001537739,0.000035431232,0.0010909752],"study_design_scores_gemma":[0.000013717931,0.00021148732,0.0036902835,0.000008196867,0.0000080407945,0.00027644954,0.000057440837,0.0012831178,0.9897091,0.00015192993,0.004584033,0.000006253357],"about_ca_topic_score_codex":0.00009397735,"about_ca_topic_score_gemma":0.0002659469,"teacher_disagreement_score":0.0007340963,"about_ca_system_score_codex":0.00013896807,"about_ca_system_score_gemma":0.00012808523,"threshold_uncertainty_score":0.002455771},"labels":[],"label_agreement":null},{"id":"W4412980109","doi":"10.1016/j.jaci.2025.07.021","title":"Autosomal-dominant Roquin-1 immunodeficiency and hyperinflammation","year":2025,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; AllerGen; University of Toronto; Hospital for Sick Children","funders":"GlaxoSmithKline; Immunodeficiency Canada; AstraZeneca; Jeffrey Modell Foundation","keywords":"Inflammation; Human immunodeficiency virus (HIV); Immunodeficiency; Immunology; Medicine; Immune system","score_opus":0.011101734779652752,"score_gpt":0.28603722348821403,"score_spread":0.27493548870856127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412980109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902976,0.0022329907,0.00082490046,0.00049308897,0.00003905995,0.000022069587,0.00029416548,0.000121304845,0.0056747403],"genre_scores_gemma":[0.9983321,0.0003017678,0.00043044178,0.0000975652,0.000066155895,0.0000065355134,0.00008854925,0.0000124008775,0.00066445395],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9995265,0.00014311983,0.000044477478,0.00010264135,0.00008071339,0.000102650956],"domain_scores_gemma":[0.99871135,0.00052541675,0.0004744312,0.0000835034,0.000047775768,0.00015761636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046062568,0.0014335616,0.00044068816,0.0010144574,0.00042233674,0.00044861226,0.00059381226,0.0012805084,0.0042187],"category_scores_gemma":[0.0012308576,0.00027399376,0.00034805137,0.00044635302,0.00089011644,0.00035830407,0.00042186215,0.00072576094,0.0004113833],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023278322,0.0003901249,0.14811179,0.00027280665,0.00023700585,0.69507974,0.0006196297,0.0004822182,0.13705356,0.0028050751,0.0010536964,0.0115665775],"study_design_scores_gemma":[0.00015813192,0.0006066209,0.16459362,0.00007329879,0.00016795022,0.82432026,0.00025746116,0.000834679,0.005566658,0.0009042009,0.0024811586,0.000035832298],"about_ca_topic_score_codex":0.0008706175,"about_ca_topic_score_gemma":0.0008204859,"teacher_disagreement_score":0.0042187,"about_ca_system_score_codex":0.00029330098,"about_ca_system_score_gemma":0.0002849102,"threshold_uncertainty_score":0.014112949},"labels":[],"label_agreement":null},{"id":"W4413143658","doi":"10.1016/j.abb.2025.110592","title":"Distinct interactions of proanthocyanidins of various degrees of polymerization with TLR4 receptor on the integrity of differentiating Caco-2 cell monolayers through tight junction protein expression","year":2025,"lang":"en","type":"article","venue":"Archives of Biochemistry and Biophysics","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Caco-2; Tight junction; Proanthocyanidin; Monolayer; Chemistry; Cell biology; Polymerization; Receptor; Biophysics; Cell; Biology; Biochemistry; Polymer; Organic chemistry","score_opus":0.007198201024661158,"score_gpt":0.21200625805148263,"score_spread":0.20480805702682148,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413143658","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99838185,0.000675439,0.0004781857,0.000034477165,0.000010632315,0.000008704,0.0000611438,0.00000914729,0.00034034747],"genre_scores_gemma":[0.99649054,0.0007666125,0.0015658742,0.000072337025,0.000011578626,0.00002815269,0.000179617,0.000006449081,0.00087886973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987423,0.000031551914,0.000009590029,0.00002079046,0.000022919003,0.00004101194],"domain_scores_gemma":[0.99989367,0.000024545776,0.000026643018,0.000009074432,0.000016785363,0.000029145884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013463154,0.00023111717,0.00013585355,0.00011340749,0.0000934707,0.00015030561,0.00009190156,0.00021567616,0.0008763462],"category_scores_gemma":[0.00019047325,0.00011546813,0.0002705723,0.00011787019,0.00012883416,0.00022876041,0.0001060516,0.0004643418,0.00014462086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015239252,0.000025298694,0.00014618161,0.000033724435,0.0000042956476,0.00001726584,0.000009205154,0.000035803398,0.99913365,0.00002123188,0.000013347721,0.00040764935],"study_design_scores_gemma":[0.000015509877,0.0005439251,0.007526631,0.000005070241,0.000017895156,0.0001024317,0.000032827957,0.0008216894,0.9901085,0.000018854029,0.00080203783,0.0000046459086],"about_ca_topic_score_codex":0.00021330001,"about_ca_topic_score_gemma":0.00026643978,"teacher_disagreement_score":0.0008763462,"about_ca_system_score_codex":0.00013055737,"about_ca_system_score_gemma":0.000111454596,"threshold_uncertainty_score":0.0029316545},"labels":[],"label_agreement":null},{"id":"W4413312133","doi":"10.1073/pnas.2512154122","title":"ER-resident CCDC134 safeguards TLR4 maturation by maintaining gp96 stability","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research; Institute of Infection and Immunity","funders":"National Key Research and Development Program of China; National Postdoctoral Program for Innovative Talents; Chinese Academy of Sciences, Shanghai Branch; China Postdoctoral Science Foundation; Chinese Academy of Sciences; National Natural Science Foundation of China; Innovative Research Team of High-level Local University in Shanghai","keywords":"Endoplasmic reticulum; TLR4; Cell biology; Secretion; Golgi apparatus; Toll-like receptor; Receptor; Unfolded protein response; Chaperone (clinical); Glycosylation; Biology; Signal transduction; Innate immune system; Biochemistry; Medicine","score_opus":0.02079753846588244,"score_gpt":0.2923841423186596,"score_spread":0.27158660385277716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413312133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9915616,0.0016220608,0.0033889462,0.00034446525,0.00007769906,0.00002749402,0.0007912691,0.00022773974,0.0019587397],"genre_scores_gemma":[0.9954933,0.00030246223,0.0014828993,0.00014027714,0.000009804674,0.000016348271,0.00081526296,0.000037533435,0.0017019693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998375,0.000016756623,0.000012913172,0.000036654706,0.00004531625,0.000050898852],"domain_scores_gemma":[0.9998454,0.000012329114,0.00004834188,0.000017761104,0.000026733509,0.000049359976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011739805,0.00021806215,0.00025941682,0.00017994185,0.00024671247,0.00040073122,0.00028785926,0.00043284617,0.0013404519],"category_scores_gemma":[0.00025275914,0.00011847631,0.00025821067,0.00013480497,0.00028686883,0.0002318013,0.00030716884,0.00060125196,0.0004309125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013212385,0.000020637235,0.0004475156,0.000055049793,0.000006179874,0.00010714072,0.0000116438705,0.000094256866,0.9969392,0.00028614484,0.00032424895,0.001575886],"study_design_scores_gemma":[0.00003620421,0.00014762633,0.0070867166,0.000011657413,0.000017602337,0.00056130055,0.000043096104,0.0015546145,0.9785202,0.00009613313,0.011911263,0.000013627492],"about_ca_topic_score_codex":0.0012429713,"about_ca_topic_score_gemma":0.0010977963,"teacher_disagreement_score":0.0013404519,"about_ca_system_score_codex":0.00056164624,"about_ca_system_score_gemma":0.00038356503,"threshold_uncertainty_score":0.0044842362},"labels":[],"label_agreement":null},{"id":"W4413741014","doi":"10.3390/genes16091014","title":"Beyond TLR4 and Its Alternative Lipopolysaccharide (LPS) Sensing Pathways in Zebrafish","year":2025,"lang":"en","type":"review","venue":"Genes","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Zebrafish; TLR4; Lipopolysaccharide; Computational biology; Biology; Cell biology; Signal transduction; Immunology; Gene; Genetics","score_opus":0.02722533363925418,"score_gpt":0.2824289131119814,"score_spread":0.2552035794727272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413741014","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07085577,0.89779943,0.008119304,0.001616078,0.0004891071,0.00004785514,0.00066378445,0.00022260916,0.020186],"genre_scores_gemma":[0.26858008,0.69375116,0.0073218094,0.001541558,0.00033133756,0.00009279662,0.0009812157,0.000043679116,0.027356358],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999311,0.000007146793,0.000008112276,0.000017663586,0.000021921662,0.0000140862785],"domain_scores_gemma":[0.9999647,0.0000043188766,0.000012000369,0.0000012612605,0.000010280231,0.0000074382624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017205073,0.00037043812,0.00033167237,0.00060093374,0.00017443486,0.00044739968,0.00027384932,0.00041492717,0.0010804413],"category_scores_gemma":[0.00010723549,0.00013666562,0.00040353078,0.00025292597,0.00030097167,0.00056932506,0.00024871077,0.0005538545,0.0002983348],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005217268,0.000038292597,0.0023350527,0.009027694,0.00012127225,0.0018407259,0.00039621143,0.0013063784,0.7395128,0.012243913,0.0056532053,0.2270027],"study_design_scores_gemma":[0.00006261544,0.0014682908,0.033118926,0.0019077192,0.0006236481,0.0054353373,0.00058618793,0.0017471331,0.14582285,0.0069343722,0.8021296,0.00016335452],"about_ca_topic_score_codex":0.0029288158,"about_ca_topic_score_gemma":0.00308265,"teacher_disagreement_score":0.0029288158,"about_ca_system_score_codex":0.00060816,"about_ca_system_score_gemma":0.0007191847,"threshold_uncertainty_score":0.0058235526},"labels":[],"label_agreement":null},{"id":"W4413786028","doi":"10.1097/cce.0000000000001308","title":"Organ Failure, Endotoxin Activity, and Mortality in Septic Shock","year":2025,"lang":"en","type":"article","venue":"Critical Care Explorations","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Iridian Spectral Technologies (Canada)","funders":"","keywords":"Medicine; Septic shock; SOFA score; Sepsis; Organ dysfunction; Shock (circulatory); Observational study; Internal medicine; Multiple organ dysfunction syndrome; Mortality rate","score_opus":0.020889125608304086,"score_gpt":0.3139766851599008,"score_spread":0.2930875595515967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413786028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9990007,0.00061898876,0.000105488114,0.00009636603,0.0000069302528,0.000003010268,0.000056241282,0.00000234281,0.00010989845],"genre_scores_gemma":[0.99962664,0.000145376,0.00006793989,0.000024980987,0.000020034096,0.0000044847934,0.000085198146,6.299546e-7,0.000024607814],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99934584,0.00037004842,0.000064969274,0.000060851362,0.00009022086,0.000068084104],"domain_scores_gemma":[0.99631965,0.0011719265,0.0015342125,0.0000848891,0.00017560819,0.0007137157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015257646,0.0004402129,0.00037605956,0.00069716986,0.00026468464,0.0005029313,0.00026153322,0.0006379255,0.0009035531],"category_scores_gemma":[0.004357313,0.00023465476,0.0002797297,0.0006258332,0.0004713846,0.00042753544,0.00049674493,0.0006486273,0.00015025274],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021816601,0.000034650344,0.998516,0.000008881962,0.000032197167,0.000042802847,0.000016507383,0.00006504596,0.00009751769,0.000007688324,0.000042783384,0.0009177256],"study_design_scores_gemma":[0.00002105572,0.00025824556,0.99863523,0.000010464362,0.000029454355,0.000300664,0.000047714304,0.00054682785,0.000041176965,0.000063285246,0.000041931602,0.0000039875104],"about_ca_topic_score_codex":0.0006338043,"about_ca_topic_score_gemma":0.00089734746,"teacher_disagreement_score":0.0015257646,"about_ca_system_score_codex":0.00018658602,"about_ca_system_score_gemma":0.00033137528,"threshold_uncertainty_score":0.008069098},"labels":[],"label_agreement":null},{"id":"W4413889888","doi":"10.1177/20499361251368006","title":"Circulating TNF-α levels in rheumatoid arthritis: a systematic review and meta-analysis and comparison to TNF-α levels in sepsis","year":2025,"lang":"en","type":"review","venue":"Therapeutic Advances in Infectious Disease","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Rheumatoid arthritis; Meta-analysis; Cochrane Library; Sepsis; Internal medicine; Tumor necrosis factor alpha; TNF inhibitor; Systematic review; MEDLINE; Immunology; Adalimumab; Gastroenterology","score_opus":0.04906915183568767,"score_gpt":0.3612969839501415,"score_spread":0.3122278321144538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413889888","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061458456,0.9916732,0.0006247256,0.00017069497,0.00019565255,0.00046475252,0.00048330257,0.000028622784,0.00021325295],"genre_scores_gemma":[0.22863823,0.7620848,0.0037738034,0.0009215743,0.00037691853,0.002761882,0.0009913184,0.00004388031,0.00040763663],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9816182,0.00987412,0.004926309,0.0015067562,0.001524055,0.0005504564],"domain_scores_gemma":[0.9739285,0.018879777,0.0042303316,0.00078831456,0.0018615777,0.00031139262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.018000979,0.0032144745,0.025701078,0.008114432,0.00080949935,0.003934757,0.0023088106,0.0027251756,0.0033569837],"category_scores_gemma":[0.042768672,0.001855837,0.052111384,0.009405901,0.00094748446,0.0020006162,0.0017349198,0.002177216,0.00034150304],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002357754,0.00002374447,0.003776574,0.35752445,0.6289371,0.0001329597,0.00007416769,0.00058967515,0.00018411908,0.00011170754,0.00038122686,0.005906446],"study_design_scores_gemma":[0.0007467854,0.00015478033,0.0022183843,0.021389375,0.9742855,0.0000735648,0.000032730095,0.00019190644,0.00008177372,0.00013635497,0.00066999946,0.000018856426],"about_ca_topic_score_codex":0.008528034,"about_ca_topic_score_gemma":0.0153343575,"teacher_disagreement_score":0.025701078,"about_ca_system_score_codex":0.0034951246,"about_ca_system_score_gemma":0.0050130356,"threshold_uncertainty_score":0.095199406},"labels":[],"label_agreement":null},{"id":"W4413980866","doi":"10.1073/pnas.2502640122","title":"12/15-lipoxygenase orchestrates murine wound healing via PPARγ-activating oxylipins acting holistically to dampen inflammation","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"HORIZON EUROPE European Research Council; Agencia Estatal de Investigación; Royal Society; Medical Research Council; University of Bristol; European Regional Development Fund; UK Research and Innovation; Wellcome Trust","keywords":"Oxylipin; Inflammation; Cell biology; Chemistry; Downregulation and upregulation; Wound healing; Cancer research; Biology; Biochemistry; Immunology","score_opus":0.038496258607344375,"score_gpt":0.3183349643386375,"score_spread":0.2798387057312931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413980866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9950429,0.0008354046,0.0023858785,0.00009207961,0.00002671178,0.000042110783,0.0003243147,0.00007377729,0.001176846],"genre_scores_gemma":[0.99435294,0.0005478399,0.0021650686,0.00008621975,0.000007907023,0.00003715306,0.0002603283,0.000019654462,0.0025229214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985254,0.00001860291,0.000014488417,0.000034441684,0.000026765461,0.000053092946],"domain_scores_gemma":[0.99991155,0.000004243736,0.00003051684,0.000007863268,0.0000061672195,0.000039594488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015881026,0.0002599836,0.00019959854,0.00020578224,0.00012732658,0.00033916387,0.0001403192,0.00022826542,0.0009630783],"category_scores_gemma":[0.000041804244,0.0001433122,0.0002667842,0.000103494356,0.0002630567,0.00023072219,0.00021953497,0.0006580647,0.00029318634],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018679432,0.000027648606,0.000107468164,0.000021792792,0.0000020634288,0.000018306308,0.000012457093,0.00002849712,0.9988889,0.000077313525,0.000016338974,0.0006124963],"study_design_scores_gemma":[0.000025951571,0.00045717083,0.003020293,0.000012770687,0.000016834523,0.00010181053,0.000059721267,0.00055155164,0.9936859,0.00007551002,0.0019885497,0.0000040129175],"about_ca_topic_score_codex":0.0002540956,"about_ca_topic_score_gemma":0.00045144578,"teacher_disagreement_score":0.0009630783,"about_ca_system_score_codex":0.000196008,"about_ca_system_score_gemma":0.0001645784,"threshold_uncertainty_score":0.0032218695},"labels":[],"label_agreement":null},{"id":"W4414167020","doi":"10.1007/s12325-025-03359-5","title":"A Narrative Review of the Immunomodulatory Effects of Acthar® Gel Beyond Its Steroidogenic Properties","year":2025,"lang":"en","type":"article","venue":"Advances in Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Mallinckrodt Pharmaceuticals","keywords":"Immune system; Narrative review; Rheumatoid arthritis; Adverse effect; Receptor; Melanocortin; Rheumatology; Adrenocorticotropic hormone","score_opus":0.005476303432366392,"score_gpt":0.25526784872908204,"score_spread":0.24979154529671566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414167020","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018307552,0.9974903,0.00011077162,0.00047460594,0.00037745468,0.000019233019,0.000088679604,0.0000069860425,0.001248897],"genre_scores_gemma":[0.000898317,0.9970119,0.00025889435,0.0005380283,0.00041678865,0.000026566611,0.000106813684,0.0000025019658,0.000740049],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99970144,0.00006303053,0.00008425958,0.00004271298,0.000089602036,0.0000188989],"domain_scores_gemma":[0.99929416,0.0004071965,0.00013647402,0.000010372869,0.00012180505,0.000029995119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052870205,0.0007377484,0.0010965718,0.0027967324,0.0002663849,0.0012254245,0.00053930946,0.00084751524,0.008078263],"category_scores_gemma":[0.0017270246,0.00023594475,0.0008788142,0.001810455,0.00022494506,0.0011738541,0.00050880987,0.0010048939,0.001673729],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001811716,0.000059395305,0.00026966317,0.14748143,0.00026965595,0.00067934085,0.00028491046,0.00029490775,0.0021899545,0.0035567563,0.08162495,0.76310784],"study_design_scores_gemma":[0.000023651419,0.00015049212,0.0008774002,0.032122448,0.00040755825,0.002264503,0.00011721043,0.0000686981,0.00035022083,0.0008924948,0.9627026,0.000022830603],"about_ca_topic_score_codex":0.0008996183,"about_ca_topic_score_gemma":0.0017473542,"teacher_disagreement_score":0.008078263,"about_ca_system_score_codex":0.00048583985,"about_ca_system_score_gemma":0.0014913668,"threshold_uncertainty_score":0.027024508},"labels":[],"label_agreement":null},{"id":"W4414295182","doi":"10.1101/2025.09.12.675895","title":"Time in sympatry correlates with the strength of reproductive isolation in hybridising <i>Typha</i>","year":2025,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"Natural Sciences and Engineering Research Council of Canada; Trent University; Compute Canada","keywords":"Sympatry; Reproductive isolation; Allopatric speciation; Biological dispersal; Sympatric speciation; Taxon","score_opus":0.005005871922330519,"score_gpt":0.19326933793093878,"score_spread":0.18826346600860827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414295182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99969625,0.00003851831,0.00007555744,0.000007429071,7.766544e-7,5.2810304e-7,0.000050767663,0.000003170468,0.00012693109],"genre_scores_gemma":[0.9997223,0.000013281269,0.00007596351,0.0000094987945,0.0000013003107,0.0000012988804,0.000105831234,0.000002545176,0.00006799066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999107,0.000016245904,0.000004997007,0.000036705875,0.0000075643484,0.000023790442],"domain_scores_gemma":[0.999283,0.00013414516,0.0003687415,0.00003730509,0.000034040215,0.00014282593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001753793,0.000099498815,0.00016063279,0.00039582225,0.00015561661,0.00044573206,0.00010001221,0.0002096249,0.0020710514],"category_scores_gemma":[0.00042451234,0.00008657119,0.00015203723,0.00027560134,0.0002327656,0.00015849333,0.00023409944,0.00039226664,0.00024414272],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039119658,0.000056178327,0.8301449,0.000037496284,0.00010896998,0.00018913431,0.00025603955,0.00018634275,0.16475855,0.00006858083,0.00015725114,0.0036454608],"study_design_scores_gemma":[0.0000017714149,0.000028297452,0.9990969,0.0000018650546,0.000007954117,0.00008723647,0.000076120574,0.00011591216,0.00049726444,0.000020764868,0.00006423801,0.0000017841951],"about_ca_topic_score_codex":0.0007661978,"about_ca_topic_score_gemma":0.0014496876,"teacher_disagreement_score":0.0020710514,"about_ca_system_score_codex":0.00010143648,"about_ca_system_score_gemma":0.00005559247,"threshold_uncertainty_score":0.0069283843},"labels":[],"label_agreement":null},{"id":"W4414497631","doi":"10.1016/j.xcrm.2025.102369","title":"Chimeric hemagglutinin-based universal influenza mRNA vaccine induces protective immunity and bone marrow plasma cells in rhesus macaques","year":2025,"lang":"en","type":"article","venue":"Cell Reports Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Acuitas Therapeutics (Canada)","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Antibody; Virus; Vaccination; Humoral immunity; Immunity; Immune system; Hemagglutinin (influenza); Bone marrow; Heterologous","score_opus":0.008085361678629133,"score_gpt":0.23687792931574386,"score_spread":0.22879256763711472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414497631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975044,0.00050078105,0.0009591107,0.00006702677,0.000016583172,0.000039454175,0.00011668169,0.00003714831,0.00075885473],"genre_scores_gemma":[0.9957004,0.0003858546,0.0014868091,0.00010431556,0.000012351486,0.00008580297,0.00021871725,0.000016207116,0.0019894538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989486,0.000014755622,0.000006457908,0.000032564058,0.000016358845,0.00003507718],"domain_scores_gemma":[0.9999238,0.0000128974125,0.000017806016,0.000012591028,0.000012627212,0.00002032592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013071195,0.00022972564,0.00017213015,0.0002237566,0.00016950998,0.00020129838,0.00011609977,0.00026767925,0.0009343022],"category_scores_gemma":[0.00017582987,0.00009355631,0.0001601376,0.00005869858,0.0002889842,0.000136757,0.00020042104,0.00044066005,0.00025730237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000149012,0.00003722203,0.00054307206,0.000022757822,0.0000034747081,0.00006113382,0.000036300396,0.000019003957,0.99748236,0.00008050209,0.000033356897,0.001531841],"study_design_scores_gemma":[0.000046958594,0.0021292707,0.028492058,0.000019360079,0.000045882964,0.00094690407,0.00021599222,0.0010031298,0.9626775,0.0002227795,0.0041897288,0.000010374906],"about_ca_topic_score_codex":0.00105808,"about_ca_topic_score_gemma":0.0014079831,"teacher_disagreement_score":0.00105808,"about_ca_system_score_codex":0.0002392243,"about_ca_system_score_gemma":0.00021738686,"threshold_uncertainty_score":0.0031255484},"labels":[],"label_agreement":null},{"id":"W4414531801","doi":"10.1038/d41586-025-03064-x","title":"Mitochondria expel tainted DNA — spurring age-related inflammation","year":2025,"lang":"en","type":"article","venue":"Nature","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"World Federation of Science Journalists","funders":"","keywords":"Organelle; DNA; Inflammation; Mitochondrial DNA; Mitochondrion","score_opus":0.00334818387319936,"score_gpt":0.23868399286617054,"score_spread":0.23533580899297118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414531801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87700474,0.08199131,0.013141094,0.013018515,0.004400582,0.00010679554,0.0005761869,0.0008824743,0.008878228],"genre_scores_gemma":[0.970779,0.012805009,0.0031726933,0.0016050889,0.0007877558,0.000030372617,0.00017613605,0.000064591506,0.010579311],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997862,0.00003366141,0.000011961734,0.000036867164,0.000061595856,0.00006977295],"domain_scores_gemma":[0.99958855,0.00004349223,0.000087845656,0.000051146668,0.00006745162,0.00016159553],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044343146,0.00034518196,0.0004103567,0.00036561792,0.00035079257,0.0008274481,0.00030278714,0.0011724578,0.0043801963],"category_scores_gemma":[0.0006057205,0.00022042701,0.00039281897,0.00011370083,0.000578348,0.0012923374,0.000780713,0.0015960154,0.0010834845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015979863,0.00016090665,0.0023429156,0.000361439,0.00005037164,0.00083707424,0.0002496969,0.000119348944,0.95571274,0.0029105574,0.0027478428,0.03290913],"study_design_scores_gemma":[0.0003604531,0.0064989617,0.044712186,0.0003751867,0.00023055053,0.0042668185,0.0012744279,0.0017884284,0.8097479,0.010708853,0.119959995,0.0000763399],"about_ca_topic_score_codex":0.00027268968,"about_ca_topic_score_gemma":0.0007146884,"teacher_disagreement_score":0.0043801963,"about_ca_system_score_codex":0.00036637502,"about_ca_system_score_gemma":0.00023284108,"threshold_uncertainty_score":0.014653206},"labels":[],"label_agreement":null},{"id":"W4414957617","doi":"10.1073/pnas.2502741122","title":"Regulation of an lncRNA <i>irf8</i> by the Ikzf1/Myb complex drives neutrophil development","year":2025,"lang":"en","type":"article","venue":"Proceedings of the National Academy of Sciences","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Agriculture","funders":"Chongqing Institute of Green and Intelligent Technology, Chinese Academy of Sciences; Chongqing Medical University; Southwest University; Chinese Academy of Sciences; National Natural Science Foundation of China","keywords":"Macrophage; Neutrophil extracellular traps; Innate immune system; Inflammation; Zebrafish; Immune system; IRF8; Myeloid; Integrin alpha M","score_opus":0.02556743975824801,"score_gpt":0.28437740870694983,"score_spread":0.25880996894870184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414957617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9629088,0.0023921763,0.025134183,0.00037946226,0.00010692717,0.0000582824,0.0017265268,0.0011310179,0.006162624],"genre_scores_gemma":[0.9846422,0.00060679135,0.0070728543,0.00018739294,0.000013982971,0.000049024427,0.000773473,0.00014857177,0.00650579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979645,0.000014490229,0.000015728934,0.00007716313,0.000050726532,0.00004538259],"domain_scores_gemma":[0.9998857,0.000009753953,0.00005363692,0.0000119229935,0.000013735209,0.000025243624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014802847,0.00030096737,0.00019575177,0.00018241077,0.0002309815,0.00027168044,0.00030737626,0.00030407388,0.0019029087],"category_scores_gemma":[0.00010820474,0.00021575864,0.00038477322,0.00008771536,0.00032814848,0.00025903474,0.00037679734,0.0007258661,0.00072597025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002081737,0.0000022872885,0.00018928068,0.000019810024,0.0000016995997,0.00002774076,0.000009415537,0.000025888221,0.99887663,0.00012608619,0.000040770166,0.00065961696],"study_design_scores_gemma":[0.000015173166,0.000065628985,0.008607596,0.000012039304,0.000017456814,0.00030482342,0.000037840582,0.0012727098,0.98363644,0.00009364116,0.0059251995,0.000011409852],"about_ca_topic_score_codex":0.0016266969,"about_ca_topic_score_gemma":0.002578882,"teacher_disagreement_score":0.0019029087,"about_ca_system_score_codex":0.000522539,"about_ca_system_score_gemma":0.00038397824,"threshold_uncertainty_score":0.0063658357},"labels":[],"label_agreement":null},{"id":"W4414975443","doi":"10.1016/j.bbalip.2025.159694","title":"ABHD6 suppression attenuates pro-inflammatory responses in mice and promotes anti-inflammatory polarization of macrophages during endotoxin stress","year":2025,"lang":"en","type":"article","venue":"Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Servier Canada","keywords":"Inflammation; Lipopolysaccharide; Docosahexaenoic acid; Lipid signaling; Eicosapentaenoic acid; Cytokine","score_opus":0.004134537448277454,"score_gpt":0.22461102694793308,"score_spread":0.22047648949965562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414975443","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99190897,0.0024000152,0.0032725516,0.00034137635,0.00012053404,0.000065165026,0.000708914,0.00020097276,0.0009815136],"genre_scores_gemma":[0.9874162,0.0022230945,0.0035560252,0.00022958108,0.00006579917,0.00015721978,0.0009710633,0.000060392464,0.005320686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965906,0.000055852364,0.00004733732,0.00006328817,0.000069020185,0.00010543841],"domain_scores_gemma":[0.9997011,0.000018578976,0.00008205955,0.000030825257,0.00002802951,0.0001393575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027085643,0.0007269055,0.0005747418,0.00060085894,0.00028257832,0.0003529002,0.0003860397,0.00058273366,0.0020541325],"category_scores_gemma":[0.00014722077,0.00026093045,0.00042338824,0.00028867138,0.00059783546,0.0004226632,0.0003000088,0.00179992,0.00053915265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011420121,0.00019059307,0.00018817831,0.000076991724,0.000008336466,0.00007295884,0.000029826711,0.00006332436,0.99638903,0.00009726152,0.00005056917,0.0016908873],"study_design_scores_gemma":[0.00014549762,0.0026297027,0.005233772,0.000021172049,0.000049224607,0.00031206058,0.000098960205,0.0010314739,0.9870085,0.000133544,0.0033243112,0.000011780638],"about_ca_topic_score_codex":0.00035773168,"about_ca_topic_score_gemma":0.0005657206,"teacher_disagreement_score":0.0020541325,"about_ca_system_score_codex":0.00020593868,"about_ca_system_score_gemma":0.00028387146,"threshold_uncertainty_score":0.00687176},"labels":[],"label_agreement":null},{"id":"W4415306513","doi":"10.1093/ajrcmb/aanag106","title":"Upper and Lower Respiratory Tract Compartmentalization in Pediatric Stem Cell Transplantation","year":2025,"lang":"en","type":"preprint","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; University of Manitoba; Alberta Children's Hospital","funders":"National Institutes of Health; Gateway Foundation; American Thoracic Society","keywords":"Compartmentalization (fire protection); Transplantation; Respiratory tract; Stem cell; Respiratory system; Cell","score_opus":0.007482333169279159,"score_gpt":0.24849013812949047,"score_spread":0.24100780496021132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415306513","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997436,0.0013655205,0.0006603439,0.000060351627,0.000005652621,0.000014270401,0.00021983268,0.0000135226755,0.00022454894],"genre_scores_gemma":[0.9984487,0.00047267272,0.000502411,0.0000343275,0.0000136894905,0.000014368413,0.00045733215,0.000004545662,0.000051884457],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99943167,0.00014134489,0.000043358938,0.0001438878,0.00014822767,0.00009147505],"domain_scores_gemma":[0.9991021,0.0001830645,0.0005407854,0.000046537585,0.00004455248,0.000082929786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007562411,0.00029067695,0.00036525851,0.00054603495,0.0002791436,0.0007689067,0.0002476429,0.00025761142,0.0011061312],"category_scores_gemma":[0.0014560443,0.00012577427,0.0003225275,0.0007614495,0.0005068296,0.00040696995,0.00070771115,0.00052028167,0.0001520845],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052674045,0.000037520986,0.9784581,0.00008287529,0.000067974135,0.00046756695,0.0001139455,0.0005963724,0.0060927123,0.00014274218,0.00016095591,0.013252474],"study_design_scores_gemma":[0.000008279415,0.00032287012,0.99235255,0.00003054095,0.0000680237,0.0019548228,0.00028779337,0.0015801821,0.0027310182,0.00019993317,0.00045861103,0.0000053455105],"about_ca_topic_score_codex":0.0010301503,"about_ca_topic_score_gemma":0.001388647,"teacher_disagreement_score":0.0011061312,"about_ca_system_score_codex":0.0005746413,"about_ca_system_score_gemma":0.0006328205,"threshold_uncertainty_score":0.0041694045},"labels":[],"label_agreement":null},{"id":"W4416015890","doi":"10.1101/2025.11.06.686934","title":"Flagellin-mediated TLR5 activation enhances innate immune responses in healthy and diseased human airway epithelium","year":2025,"lang":"","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; European Commission; Université de Lille","keywords":"TLR5; Innate immune system; Flagellin; Respiratory epithelium; Immune system; Pneumonia; Cystic fibrosis; Airway; Mucosal immunology; TLR4","score_opus":0.010230631119535444,"score_gpt":0.24093633698423916,"score_spread":0.2307057058647037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416015890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99560475,0.0018257992,0.0014508552,0.00006385629,0.000021287002,0.000029957053,0.00028014413,0.000020339123,0.0007030717],"genre_scores_gemma":[0.99666625,0.00056158256,0.0012146975,0.00010610305,0.000008800552,0.000038461487,0.0005150715,0.0000033356937,0.0008856981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978095,0.000049547987,0.000016648715,0.000045987344,0.000046487203,0.000060371567],"domain_scores_gemma":[0.9999558,0.000010148868,0.00000833617,0.0000046191153,0.000010867149,0.000010284357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002694157,0.00016835102,0.00016023063,0.00019765277,0.00015983907,0.00030760668,0.00008520387,0.00028387687,0.0015244496],"category_scores_gemma":[0.0001224767,0.00010141598,0.00025687146,0.00010512078,0.00014197394,0.00014740771,0.00022807678,0.0003143543,0.00030340583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017140529,0.000025755715,0.0006202152,0.000055602275,0.0000043604095,0.000028674383,0.000020242554,0.000030654,0.9977163,0.0000200014,0.000029083692,0.0012777655],"study_design_scores_gemma":[0.00003286972,0.0015454983,0.05161656,0.00002864259,0.000032924843,0.00039049974,0.00024488245,0.0017206185,0.94161004,0.00005001272,0.0027174633,0.00001001012],"about_ca_topic_score_codex":0.0006224244,"about_ca_topic_score_gemma":0.00074661965,"teacher_disagreement_score":0.0015244496,"about_ca_system_score_codex":0.00024055914,"about_ca_system_score_gemma":0.00015271867,"threshold_uncertainty_score":0.0050997734},"labels":[],"label_agreement":null},{"id":"W4416446337","doi":"10.1093/jimmun/vkaf283.141","title":"The effectiveness and immunogenicity of an oil-in-water nano-emulsion protein subunit vaccine against Pseudomonas aeruginosa in diet induced obese mice 2193","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Immunogenicity; Immunogen; Immunization; Pseudomonas aeruginosa; Population; Spleen; Antibody; Pathogen","score_opus":0.005380969267054749,"score_gpt":0.23274388011594083,"score_spread":0.22736291084888607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416446337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997519,0.000540196,0.0009215512,0.00012656396,0.000060922175,0.00004665887,0.00021893645,0.000029053048,0.00053708826],"genre_scores_gemma":[0.99356246,0.00075030426,0.0015811366,0.00014247508,0.000036817593,0.00009598065,0.0006517727,0.000019170919,0.0031598976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998147,0.000028779337,0.000017704042,0.000034857323,0.00004862151,0.00005529035],"domain_scores_gemma":[0.99977726,0.000023031214,0.000060986877,0.000018192592,0.000035903453,0.00008468854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025228868,0.00043880916,0.00028216693,0.00036848494,0.00011528714,0.00027622582,0.00021790023,0.00052905217,0.0011393782],"category_scores_gemma":[0.0001468831,0.000157074,0.00034581832,0.00011104459,0.00022339763,0.00035169316,0.0001943875,0.0012736601,0.0002879902],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00084918126,0.0006155052,0.00019422924,0.00004976991,0.0000067974124,0.00003002224,0.000017814393,0.0000646039,0.99663466,0.000045137236,0.00005246288,0.0014398922],"study_design_scores_gemma":[0.00018163516,0.018830981,0.0049530864,0.000027833408,0.000055095596,0.00020112966,0.000072646886,0.0010848574,0.97283894,0.00007052293,0.0016706904,0.000012688868],"about_ca_topic_score_codex":0.00039961096,"about_ca_topic_score_gemma":0.0004223591,"teacher_disagreement_score":0.0011393782,"about_ca_system_score_codex":0.00019452228,"about_ca_system_score_gemma":0.00019905041,"threshold_uncertainty_score":0.0038115978},"labels":[],"label_agreement":null},{"id":"W4416446460","doi":"10.1093/jimmun/vkaf283.075","title":"The Role of Treg-expressed Mmp12 During the Resolution of Acute Lung Injury 2111","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lung; Immune system; Phenotype; Inflammation; Strain (injury); Acute injury","score_opus":0.0027790499148740537,"score_gpt":0.2216896925947171,"score_spread":0.21891064267984306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416446460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99173963,0.003903752,0.0019230542,0.0002723498,0.00012504628,0.0000403349,0.0004250878,0.00010341186,0.0014673331],"genre_scores_gemma":[0.99474216,0.00091364695,0.001021311,0.000105737854,0.00007011282,0.000039866954,0.0003818403,0.00002045317,0.0027048416],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979573,0.000030572814,0.000020873398,0.00003548924,0.000044876215,0.00007247971],"domain_scores_gemma":[0.99974257,0.000015374593,0.00006534878,0.000020281965,0.00004154122,0.00011483646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020582344,0.00026487777,0.00032306206,0.00024588726,0.00016516683,0.00041638134,0.00018424707,0.00030343447,0.0016824483],"category_scores_gemma":[0.0001834785,0.00010180744,0.00027758916,0.00010669022,0.00023792888,0.00018222617,0.0001975162,0.0011032358,0.0006747529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010511152,0.00012205109,0.00213646,0.00009063461,0.0000094605775,0.00026243555,0.000031129126,0.000048884376,0.9903985,0.00011003686,0.00023367383,0.0055055725],"study_design_scores_gemma":[0.00024565565,0.0037219205,0.11826454,0.000080443715,0.00010401139,0.0023680392,0.0004693471,0.0020967633,0.86242473,0.0004729928,0.009725701,0.00002584036],"about_ca_topic_score_codex":0.00023094274,"about_ca_topic_score_gemma":0.0003116273,"teacher_disagreement_score":0.0016824483,"about_ca_system_score_codex":0.00015404988,"about_ca_system_score_gemma":0.00018151705,"threshold_uncertainty_score":0.005628407},"labels":[],"label_agreement":null},{"id":"W4416447998","doi":"10.1093/jimmun/vkaf283.866","title":"Structure of the interleukin-5 receptor complex exemplifies the organizing principle of common beta cytokine signaling 3024","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Receptor; Signal transduction; Functional selectivity; Ternary complex; Immune system; Cell surface receptor; Cell signaling; Chemokine receptor; Chemokine","score_opus":0.011592242836183191,"score_gpt":0.25139390833345027,"score_spread":0.23980166549726709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416447998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92815346,0.0038448088,0.038164526,0.001144125,0.00021544305,0.0000376658,0.00056062365,0.00054372806,0.02733572],"genre_scores_gemma":[0.9814502,0.00088569894,0.010120915,0.00020669705,0.00004143232,0.000019872845,0.00088964385,0.000040466635,0.0063450085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999571,0.0000055219994,0.0000018605964,0.00001286433,0.000011782488,0.000010840685],"domain_scores_gemma":[0.9999485,0.000007469775,0.000010827966,0.0000075647927,0.000006894558,0.000018691857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000048623708,0.00017716341,0.00016935245,0.00015280534,0.00031973873,0.00059962727,0.00034585886,0.00040453605,0.0059332964],"category_scores_gemma":[0.000120721445,0.0001685669,0.00018605574,0.00014873604,0.00022309941,0.0004195259,0.00020442912,0.00041548826,0.0015394797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028769913,0.000039123664,0.000622926,0.00010814894,0.000019054625,0.0004419592,0.000090718684,0.0016798924,0.9748414,0.01366653,0.0022510244,0.005951477],"study_design_scores_gemma":[0.00028790525,0.00082871923,0.046315365,0.00019190094,0.00011100086,0.004197284,0.0006324454,0.11456613,0.67114013,0.016106192,0.14549637,0.00012652877],"about_ca_topic_score_codex":0.0007536979,"about_ca_topic_score_gemma":0.00068447593,"teacher_disagreement_score":0.0059332964,"about_ca_system_score_codex":0.00043843308,"about_ca_system_score_gemma":0.00020399725,"threshold_uncertainty_score":0.019848824},"labels":[],"label_agreement":null},{"id":"W4416674354","doi":"10.1021/acsnano.5c12658","title":"Natural Macrophage Membrane-Coated Nanoparticles as a Multifaceted Sepsis Therapeutic to Sequester Inflammatory and Toxic Mediators","year":2025,"lang":"en","type":"article","venue":"ACS Nano","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Novo Nordisk Fonden; Biomedical Advanced Research and Development Authority; Bundesministerium für Bildung und Forschung; Public Health Agency of Canada; Wellcome Trust; Wellcome; A.P. Giannini Foundation","keywords":"Sepsis; Macrophage; Inflammation; Immune system; Drug; Cytokine; Systemic administration; Host response","score_opus":0.005816537933959768,"score_gpt":0.2442766491593312,"score_spread":0.23846011122537142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416674354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9626636,0.009709588,0.021886202,0.0008206255,0.00022370814,0.00011409257,0.00011326774,0.00019354843,0.0042754123],"genre_scores_gemma":[0.9759669,0.0030557422,0.017859813,0.00030927898,0.00002289754,0.000068319605,0.000078156525,0.00001431097,0.0026246302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993074,0.000017591125,0.0000036555675,0.000014138897,0.00001946282,0.000014375913],"domain_scores_gemma":[0.9999684,0.0000059108306,0.000009116243,0.0000029717726,0.000005201338,0.000008345566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012199241,0.0002477428,0.00016341577,0.000116434145,0.000096427284,0.00022618451,0.00017384226,0.00040602483,0.00032223063],"category_scores_gemma":[0.000083341,0.000120833385,0.00014363081,0.000053132306,0.00022121213,0.00021540653,0.00030432272,0.00036302625,0.0001355942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008402284,0.000035957666,0.00012069198,0.00007042963,0.0000050714407,0.00006513043,0.000011366462,0.00041586248,0.9946713,0.00045506496,0.00017841661,0.0038867015],"study_design_scores_gemma":[0.000032497534,0.00065559294,0.00046783572,0.000016069704,0.00001817293,0.0002704289,0.0000140622615,0.0042373743,0.9892818,0.00009719233,0.0048993197,0.0000096699305],"about_ca_topic_score_codex":0.00017321647,"about_ca_topic_score_gemma":0.00032487538,"teacher_disagreement_score":0.00040602483,"about_ca_system_score_codex":0.0002490779,"about_ca_system_score_gemma":0.00021784187,"threshold_uncertainty_score":0.0018071532},"labels":[],"label_agreement":null},{"id":"W4416730629","doi":"10.3389/fimmu.2025.1679375","title":"Adopting orphan receptors: zebrafish Tlr4 homologs mediate responses to group IX/X transition metals","year":2025,"lang":"en","type":"article","venue":"Frontiers in Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; University of Alberta; Cancer Research Institute","keywords":"Zebrafish; TLR4; Homologous chromosome; Gene knockdown; Receptor; Function (biology); Innate immune system","score_opus":0.006634435231385344,"score_gpt":0.22900013832271265,"score_spread":0.2223657030913273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416730629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.960048,0.003287349,0.016149247,0.001289786,0.0002466683,0.000113924594,0.0020292595,0.0007602564,0.01607556],"genre_scores_gemma":[0.9726696,0.0013861443,0.006130295,0.0006268164,0.000025214029,0.00012296607,0.0010146677,0.00005399273,0.017970398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974054,0.000022434246,0.000017114766,0.00008124948,0.00006840979,0.00007014263],"domain_scores_gemma":[0.99988735,0.000009614395,0.000044462442,0.000012372247,0.000021487556,0.000024783472],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018909147,0.00043900366,0.00023544877,0.00032734204,0.00032581488,0.00035750482,0.00029387925,0.0005906068,0.005763407],"category_scores_gemma":[0.00020764914,0.0002261416,0.00056804507,0.00012809318,0.00047912457,0.00049206417,0.0007682556,0.0008326946,0.0014324267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009122153,0.000006180984,0.00051008345,0.00005792756,0.000004248829,0.00008707342,0.000019256895,0.000043507927,0.99712014,0.00019282816,0.00013129963,0.0017362299],"study_design_scores_gemma":[0.00004843853,0.0005737073,0.017237855,0.000044063763,0.000059315083,0.00074888073,0.0001952315,0.0007386466,0.96700644,0.0003628683,0.012961952,0.00002248034],"about_ca_topic_score_codex":0.0017113311,"about_ca_topic_score_gemma":0.0022141216,"teacher_disagreement_score":0.005763407,"about_ca_system_score_codex":0.0006249406,"about_ca_system_score_gemma":0.00046297876,"threshold_uncertainty_score":0.019280553},"labels":[],"label_agreement":null},{"id":"W4416875915","doi":"10.1681/asn.2025wwvkbzxq","title":"Effect of Polymyxin B Hemoadsorption on Mortality in Patients with Endotoxic Septic Shock: The TIGRIS Trial","year":2025,"lang":"en","type":"article","venue":"Journal of the American Society of Nephrology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Polymyxin B; Polymyxin; Endotoxic shock; Septic shock; Antibiotics; Sepsis","score_opus":0.004879693102053281,"score_gpt":0.2509212801876661,"score_spread":0.2460415870856128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416875915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844716,0.011632528,0.00035868504,0.0013376705,0.00022637023,0.0003599306,0.00041372108,0.000029679299,0.001169692],"genre_scores_gemma":[0.9940171,0.0030230319,0.00057553954,0.0006236993,0.00026965476,0.00044708757,0.00055810023,0.0000055767987,0.000480198],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99846774,0.0011438795,0.00007667871,0.00012290594,0.000086385444,0.00010241224],"domain_scores_gemma":[0.99814606,0.00080071785,0.0005777324,0.00014030145,0.0000681164,0.00026714953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039917645,0.0009172706,0.0017698742,0.00023101365,0.00019527918,0.000715527,0.00068438845,0.0008552742,0.0018310883],"category_scores_gemma":[0.0037127377,0.00018340714,0.0024522603,0.00032021492,0.00061636383,0.00041483404,0.000445033,0.001917427,0.00017937536],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.94556826,0.0019268068,0.009929462,0.0015789948,0.0064552533,0.00006967203,0.00006494408,0.0017217045,0.0013981849,0.00038333252,0.001431649,0.029471667],"study_design_scores_gemma":[0.84206766,0.10154012,0.038350854,0.0005311459,0.010352289,0.00019416033,0.00009019052,0.0030690522,0.0011640058,0.0009160452,0.0016710425,0.000053388336],"about_ca_topic_score_codex":0.0004929674,"about_ca_topic_score_gemma":0.00072999985,"teacher_disagreement_score":0.0039917645,"about_ca_system_score_codex":0.00066426594,"about_ca_system_score_gemma":0.000832985,"threshold_uncertainty_score":0.021110713},"labels":[],"label_agreement":null},{"id":"W4416943253","doi":"10.1080/15384047.2025.2590881","title":"Toll-like receptor 4 inhibition sensitizes non-small cell lung cancer to radiotherapy","year":2025,"lang":"en","type":"article","venue":"Cancer Biology & Therapy","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Fonds de Recherche du Québec - Santé; Canada Excellence Research Chairs, Government of Canada; Université de Sherbrooke; Cancer Research Society","keywords":"Radiation therapy; Lung cancer; Receptor; Sensitivity (control systems); Cell; Cell growth; Chemotherapy","score_opus":0.008463146016488123,"score_gpt":0.27408852939472134,"score_spread":0.2656253833782332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416943253","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98781955,0.0064789695,0.001102575,0.0002617976,0.00025052525,0.00012324765,0.00043480634,0.0002766516,0.0032518506],"genre_scores_gemma":[0.9899714,0.0040551014,0.0010115508,0.00018245052,0.0000448767,0.00014383995,0.00077022164,0.00002641511,0.003794088],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984384,0.000034196084,0.000015037075,0.000018766808,0.000036906786,0.000051255836],"domain_scores_gemma":[0.9999423,0.000010254964,0.000013684627,0.000011049835,0.0000073334436,0.00001533436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017053015,0.00040942032,0.00062407315,0.00033891303,0.00016347328,0.0002714728,0.00029013262,0.00029652508,0.0030877625],"category_scores_gemma":[0.00011812886,0.00022316282,0.000664264,0.00018063962,0.00019663377,0.0001829443,0.00022626172,0.00080095854,0.0006357524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083614636,0.00050081284,0.00054015353,0.00025525683,0.000051856543,0.00010563612,0.00003371957,0.0002745826,0.9889473,0.00007364294,0.0005845518,0.0077964067],"study_design_scores_gemma":[0.00031050082,0.010692181,0.011975361,0.00003272093,0.00012118684,0.0007239012,0.00010054505,0.0018503836,0.96467775,0.00013207238,0.009359857,0.000023545264],"about_ca_topic_score_codex":0.00029922414,"about_ca_topic_score_gemma":0.00073328806,"teacher_disagreement_score":0.0030877625,"about_ca_system_score_codex":0.00019878034,"about_ca_system_score_gemma":0.00024175752,"threshold_uncertainty_score":0.010329604},"labels":[],"label_agreement":null},{"id":"W4417027259","doi":"10.1016/j.nano.2025.102887","title":"PapMV nanoparticles: A novel pathway to SARS-CoV-2 protection, distinct from Imidazoquinolines","year":2025,"lang":"en","type":"article","venue":"Nanomedicine Nanotechnology Biology and Medicine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research; Fonds de recherche du Québec; Canada First Research Excellence Fund; Centre Hospitalier Universitaire de Québec; Canada Research Chairs; Canada Foundation for Innovation; Université Laval","keywords":"Immune system; TLR7; Innate immune system; Motility; Apoptosis; Cell; Receptor","score_opus":0.01867395773976299,"score_gpt":0.28622706065396836,"score_spread":0.26755310291420537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417027259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9230073,0.008964822,0.04927464,0.0012678852,0.0003612861,0.00022964129,0.0005633495,0.00090883195,0.01542227],"genre_scores_gemma":[0.9850542,0.0014089593,0.006998412,0.0003251123,0.0000328235,0.000060962484,0.00023446862,0.000028098437,0.005856944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999263,0.000013982937,0.000002972668,0.000018548795,0.000015897416,0.000022295584],"domain_scores_gemma":[0.9999528,0.0000116800375,0.000010569891,0.0000060550524,0.000011153229,0.0000076264546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000105753694,0.00031964577,0.00016552077,0.00009151529,0.00012394032,0.00038606577,0.00022088924,0.00040283336,0.0015559937],"category_scores_gemma":[0.00016004297,0.000098169585,0.00020340795,0.000040101688,0.0001678935,0.00031251748,0.00019063512,0.00046094254,0.0004113284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001496159,0.000026279738,0.00007499792,0.00009718179,0.000006913644,0.000081930775,0.000018702369,0.000114865565,0.9924022,0.00091771246,0.0002480895,0.0058615976],"study_design_scores_gemma":[0.00003297275,0.0003839867,0.00065923814,0.000015274438,0.000016584214,0.00039664737,0.000023787507,0.0012403757,0.98908794,0.00036911198,0.0077667856,0.0000071930112],"about_ca_topic_score_codex":0.00035677265,"about_ca_topic_score_gemma":0.0004230655,"teacher_disagreement_score":0.0015559937,"about_ca_system_score_codex":0.00031922216,"about_ca_system_score_gemma":0.00019941285,"threshold_uncertainty_score":0.0052052736},"labels":[],"label_agreement":null},{"id":"W4417063817","doi":"10.1016/b978-0-443-33074-2.00012-3","title":"Endotoxin in trauma","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Gastrointestinal tract; Perspective (graphical); Clinical significance; Sepsis; Digestive tract","score_opus":0.009802820822950477,"score_gpt":0.22657404148568525,"score_spread":0.21677122066273477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417063817","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010513102,0.36389962,0.00243435,0.005658999,0.010595031,0.00004593638,0.00013989543,0.00018702645,0.61598784],"genre_scores_gemma":[0.0032896819,0.11360426,0.0010248378,0.0019294136,0.0024792112,0.000032571388,0.0001089508,0.00005027,0.87748075],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999275,0.0000115084395,0.0000048426027,0.000012030872,0.000034615503,0.000009499965],"domain_scores_gemma":[0.99994504,0.00001878013,0.0000041683484,0.000005865288,0.000012633395,0.000013475061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017853294,0.0008784542,0.00043469784,0.0012649941,0.0005823219,0.0011471671,0.000510149,0.0012725948,0.06466446],"category_scores_gemma":[0.0003007786,0.0002555163,0.00028893573,0.000960405,0.0005370531,0.0013113705,0.0013490026,0.0016045031,0.035461612],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031742125,0.0000552041,0.0001355674,0.00049447623,0.0000075295147,0.00037552463,0.00021653953,0.00024127858,0.0013089272,0.026546013,0.36973727,0.6008498],"study_design_scores_gemma":[0.00000227934,0.000015627706,0.0002247056,0.00025188332,0.0000025183936,0.00051733997,0.00004116375,0.00003501998,0.00011202995,0.0038543476,0.9949405,0.0000025144095],"about_ca_topic_score_codex":0.0013400919,"about_ca_topic_score_gemma":0.0041169575,"teacher_disagreement_score":0.06466446,"about_ca_system_score_codex":0.00043889554,"about_ca_system_score_gemma":0.00048490753,"threshold_uncertainty_score":0.21632415},"labels":[],"label_agreement":null},{"id":"W4417063892","doi":"10.1016/b978-0-443-33074-2.00007-x","title":"Therapeutic rationale for endotoxin removal with polymyxin B immobilized fiber column hemoperfusion (PMX-HP) for endotoxemic septic shock","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Hemoperfusion; Septic shock; Polymyxin B; Polymyxin; Antibiotics","score_opus":0.011823944352172266,"score_gpt":0.23429831481330474,"score_spread":0.22247437046113247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417063892","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11448956,0.42400157,0.19976465,0.0536259,0.009975113,0.0004480046,0.00054746174,0.00096458493,0.19618317],"genre_scores_gemma":[0.51665676,0.18672231,0.11517307,0.025755046,0.005448521,0.0007357917,0.00038491798,0.00015920079,0.1489644],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99996126,0.000011265891,0.0000028745958,0.000008216967,0.000009587498,0.0000068600357],"domain_scores_gemma":[0.99997985,0.000009077992,0.0000041632493,0.0000010988745,0.0000023596706,0.0000034365628],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022474119,0.00034376147,0.00019984838,0.00019477747,0.00018362606,0.00044032288,0.00049253716,0.00076721597,0.0036088238],"category_scores_gemma":[0.00009898655,0.00008727466,0.00020758163,0.000135982,0.0004378398,0.00030075482,0.00020724168,0.0014140408,0.0009768463],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016257905,0.0006656224,0.00079395744,0.0015037855,0.00006292413,0.0043243393,0.00021162032,0.0016145915,0.3236029,0.18050809,0.03720758,0.44787878],"study_design_scores_gemma":[0.00062361907,0.0035602488,0.0056393202,0.0012819481,0.00025526877,0.033697117,0.00028287922,0.006206312,0.16129357,0.07755357,0.7095194,0.00008678641],"about_ca_topic_score_codex":0.00015151162,"about_ca_topic_score_gemma":0.00027118332,"teacher_disagreement_score":0.0036088238,"about_ca_system_score_codex":0.0002796137,"about_ca_system_score_gemma":0.00033927348,"threshold_uncertainty_score":0.012072742},"labels":[],"label_agreement":null},{"id":"W4417063941","doi":"10.1016/b978-0-443-33074-2.00011-1","title":"Endotoxic septic shock","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tornado Spectral Systems (Canada)","funders":"","keywords":"Septic shock; Sepsis; Organ dysfunction; Lipopolysaccharide; Shock (circulatory); Immune system; Innate immune system","score_opus":0.00862079152675464,"score_gpt":0.2223124140190457,"score_spread":0.21369162249229107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417063941","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027328024,0.053206004,0.0040531834,0.0023559711,0.0039947904,0.00005110496,0.00027418803,0.0005276858,0.93280417],"genre_scores_gemma":[0.0038839043,0.013459979,0.0010669391,0.00083851616,0.0007484123,0.00003462323,0.00016977491,0.00005101346,0.9797468],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99994624,0.0000065301438,0.0000031464801,0.000008951375,0.000025646326,0.000009493858],"domain_scores_gemma":[0.9999429,0.000019108698,0.000004902519,0.000006254406,0.0000118264625,0.000015105791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013095273,0.000818486,0.00037950283,0.00055660884,0.00043086853,0.0008342612,0.0003295012,0.0008812459,0.13435145],"category_scores_gemma":[0.00019654156,0.0001799012,0.0002986843,0.00037503528,0.0002656547,0.00057555584,0.0009725574,0.0013628502,0.079188175],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008462746,0.00009223198,0.0002606103,0.0003420379,0.000012779907,0.0008600677,0.000092352566,0.00024587198,0.006190855,0.00897367,0.21539326,0.7674516],"study_design_scores_gemma":[0.000010680585,0.00006635107,0.0010066216,0.00027063064,0.0000068040363,0.0014493961,0.000033747612,0.00011824601,0.0007678142,0.0025354186,0.9937289,0.0000054881393],"about_ca_topic_score_codex":0.0006919918,"about_ca_topic_score_gemma":0.0018147134,"teacher_disagreement_score":0.13435145,"about_ca_system_score_codex":0.00020385842,"about_ca_system_score_gemma":0.00027883344,"threshold_uncertainty_score":0.44945037},"labels":[],"label_agreement":null},{"id":"W4417064017","doi":"10.1016/b978-0-443-33074-2.00014-7","title":"Quantifying endotoxin in the blood of humans; a personal journey toward development of the endotoxin activity assay","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Tornado Spectral Systems (Canada)","funders":"","keywords":"Immune system; Lipopolysaccharide; Sepsis; Antibody","score_opus":0.038372220273065104,"score_gpt":0.2662766616664536,"score_spread":0.22790444139338847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417064017","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008085346,0.4815912,0.374611,0.021169275,0.0062236134,0.00016876755,0.0007839134,0.0018198526,0.10554707],"genre_scores_gemma":[0.030613082,0.35571948,0.3227992,0.01111703,0.0042354506,0.00025393686,0.000650886,0.0008234909,0.27378747],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99917275,0.00016221992,0.000064223896,0.00014576025,0.00042818912,0.0000267878],"domain_scores_gemma":[0.99899083,0.00056159904,0.00005496684,0.000068791225,0.00024664728,0.00007714346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029699833,0.0010880744,0.00073812815,0.0021577,0.00036105167,0.0022827717,0.0009863343,0.0016229484,0.006548053],"category_scores_gemma":[0.0015152227,0.0005529586,0.00033535797,0.0012702165,0.0020985424,0.0032364768,0.0012570741,0.0036981285,0.008187504],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105981824,0.00021164583,0.0011416266,0.0008890351,0.000024207424,0.00037981485,0.0006975313,0.0005295883,0.07074885,0.033371713,0.05722596,0.8346742],"study_design_scores_gemma":[0.0000099734725,0.00035608446,0.00126356,0.00057749584,0.000020820624,0.0023774784,0.00028150444,0.0010599842,0.056217853,0.02170828,0.91605794,0.00006903697],"about_ca_topic_score_codex":0.00072594045,"about_ca_topic_score_gemma":0.0014858857,"teacher_disagreement_score":0.006548053,"about_ca_system_score_codex":0.0006547715,"about_ca_system_score_gemma":0.00079067325,"threshold_uncertainty_score":0.021905422},"labels":[],"label_agreement":null},{"id":"W4417064019","doi":"10.1016/b978-0-443-33074-2.00003-2","title":"Sepsis and endotoxin: A brief history","year":2025,"lang":"en","type":"book-chapter","venue":"Elsevier eBooks","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tornado Spectral Systems (Canada)","funders":"","keywords":"Sepsis; Lipopolysaccharide; Infectious disease (medical specialty); Immune system; Septic shock; Disease","score_opus":0.01031333300938247,"score_gpt":0.20810465722418456,"score_spread":0.19779132421480208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417064019","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00036147097,0.9252356,0.0005643633,0.007000555,0.016834402,0.000013613815,0.00005402438,0.000035258923,0.049900766],"genre_scores_gemma":[0.0026086527,0.8216829,0.0008651025,0.011744951,0.021169778,0.000045977984,0.00011428439,0.000044948298,0.14172351],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996989,0.00008539671,0.000032445714,0.00003648582,0.000106604784,0.000040231665],"domain_scores_gemma":[0.99969757,0.00016025931,0.00002538211,0.000014619655,0.00004961374,0.000052651016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056690513,0.0014403207,0.0011623562,0.0040615452,0.0012055144,0.0031508475,0.0008518265,0.0036177386,0.021166708],"category_scores_gemma":[0.00094794953,0.0005094847,0.0005541605,0.0035830983,0.0015238683,0.0039834753,0.0031873886,0.0034400309,0.013555625],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011873144,0.00018759984,0.00018030996,0.0021227035,0.000018618706,0.0009400204,0.00040025325,0.0003214601,0.0012914758,0.029096395,0.6124585,0.35286394],"study_design_scores_gemma":[0.0000036612805,0.000032486263,0.0002297685,0.0007140386,0.000004083643,0.0005200388,0.00007664989,0.000017479773,0.000051346426,0.0031891786,0.9951545,0.0000067761475],"about_ca_topic_score_codex":0.0013736776,"about_ca_topic_score_gemma":0.0033420573,"teacher_disagreement_score":0.021166708,"about_ca_system_score_codex":0.0011206463,"about_ca_system_score_gemma":0.0013593173,"threshold_uncertainty_score":0.07080972},"labels":[],"label_agreement":null},{"id":"W4417279188","doi":"10.1016/j.medj.2025.100931","title":"TL1A blockade in inflammatory bowel diseases: Clinical trials to watch","year":2025,"lang":"en","type":"article","venue":"Med","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Inflammatory bowel disease; Clinical trial; Blockade; Disease; Ulcerative colitis; Phases of clinical research","score_opus":0.03444172260839322,"score_gpt":0.37844676005299965,"score_spread":0.3440050374446064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417279188","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029552117,0.911023,0.0017335734,0.039428666,0.0077216965,0.00066427444,0.0010004317,0.0003286086,0.008547573],"genre_scores_gemma":[0.21916729,0.6499416,0.004064148,0.09690008,0.012911075,0.0018117921,0.0023706292,0.00016611499,0.012667315],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99932456,0.00028730562,0.000073733216,0.00009583171,0.000082312945,0.00013632233],"domain_scores_gemma":[0.99770606,0.0011432434,0.00046304846,0.000078317404,0.00018386266,0.00042543517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030120383,0.0012574531,0.0049295854,0.0004468081,0.00051646447,0.0025887412,0.00093293726,0.0033123046,0.008689098],"category_scores_gemma":[0.0034760875,0.00040530303,0.002811669,0.0005202839,0.0010835289,0.002107346,0.0006190467,0.0070052943,0.0020683017],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.08296896,0.0032189337,0.0025375453,0.017768493,0.0042213867,0.00044331397,0.00020235733,0.0015092122,0.009310572,0.0057941834,0.12416821,0.74785674],"study_design_scores_gemma":[0.28804198,0.08337103,0.010743839,0.021335011,0.009354684,0.0015890666,0.00073391653,0.0022711304,0.004936527,0.017486623,0.55986863,0.00026761618],"about_ca_topic_score_codex":0.0007090191,"about_ca_topic_score_gemma":0.0022575122,"teacher_disagreement_score":0.008689098,"about_ca_system_score_codex":0.00078855595,"about_ca_system_score_gemma":0.0012126461,"threshold_uncertainty_score":0.029067934},"labels":[],"label_agreement":null},{"id":"W48193803","doi":"10.1096/fasebj.23.1_supplement.572.12","title":"Anti‐inflammatory benefits of an antibiotic via modulation of neutrophil and macrophage function: The example of tulathromycin","year":2009,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipopolysaccharide; Apoptosis; Phagocytosis; Nitric oxide; Inflammation; Zymosan; Immune system; Microbiology; Macrophage; Antibiotics; Immunology; Chemistry; Biology; Biochemistry; In vitro; Endocrinology","score_opus":0.01136425781723933,"score_gpt":0.21203346501465142,"score_spread":0.2006692071974121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W48193803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8285668,0.14097202,0.012803331,0.0042389506,0.0003645521,0.000057946407,0.00014970746,0.00010460318,0.0127420975],"genre_scores_gemma":[0.9527034,0.03528512,0.006573188,0.0004931657,0.00013061111,0.000030425665,0.000045353227,0.000015353184,0.0047233645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998838,0.000054395503,0.0000058161695,0.000010280125,0.000024645455,0.000021013577],"domain_scores_gemma":[0.99993086,0.00002103939,0.000013016895,0.000007578516,0.000011853012,0.000015755431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021924023,0.00020919062,0.00025295324,0.0001567269,0.0001393097,0.00035401524,0.00013878135,0.00037263078,0.0007191111],"category_scores_gemma":[0.00016936069,0.000056581775,0.00016189305,0.00011137151,0.00024648043,0.00034840274,0.00019215494,0.0004582637,0.0001325941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006279276,0.00008094321,0.00044381295,0.0004000494,0.000015378224,0.00048031073,0.000042851738,0.00014615369,0.96506774,0.0016024869,0.00036668088,0.030725686],"study_design_scores_gemma":[0.00014967009,0.002452957,0.010883991,0.000097620745,0.00010587318,0.0028011415,0.00012195671,0.0024514005,0.93356353,0.0016565222,0.04569125,0.00002413052],"about_ca_topic_score_codex":0.00015880557,"about_ca_topic_score_gemma":0.0005216549,"teacher_disagreement_score":0.0007191111,"about_ca_system_score_codex":0.00018935543,"about_ca_system_score_gemma":0.00014778646,"threshold_uncertainty_score":0.0024056435},"labels":[],"label_agreement":null},{"id":"W53192118","doi":"10.1096/fasebj.21.6.a975-c","title":"Human Neutrophils produce alternatively spliced variants of 5‐Lipoxygenase mRNA","year":2007,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Moncton","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Gene isoform; Alternative splicing; Messenger RNA; Intron; Molecular biology; Exon; Biochemistry; Open reading frame; Biology; Arachidonic acid; Arachidonate 5-lipoxygenase; Biosynthesis; RNA splicing; Lipoxygenase; Enzyme; Chemistry; Gene; RNA; Peptide sequence","score_opus":0.017390337698242834,"score_gpt":0.26539266363165204,"score_spread":0.2480023259334092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W53192118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99386215,0.0014064284,0.0034178854,0.00008245521,0.000031922926,0.000030176237,0.00034061872,0.00002834495,0.0008000431],"genre_scores_gemma":[0.9918081,0.00074703945,0.0039323885,0.0001119908,0.000028699007,0.00003056987,0.0014415177,0.000013966067,0.0018857158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997899,0.00003436266,0.00002486837,0.000052290772,0.000054230295,0.000044272416],"domain_scores_gemma":[0.99977607,0.000054653938,0.000053934684,0.00004426771,0.000041698808,0.000029367915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022801982,0.00026981902,0.00018188333,0.0001460002,0.00009854071,0.00037501418,0.000108461754,0.00024213562,0.001391372],"category_scores_gemma":[0.00029777273,0.00014243172,0.00022077785,0.00010226777,0.00015806983,0.00013357913,0.00019793416,0.00028290742,0.00081973604],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015183023,0.00001610944,0.0016655726,0.000019256879,0.0000042729425,0.00020675277,0.00004082179,0.000019282423,0.99536175,0.000105155494,0.000036246794,0.0023729927],"study_design_scores_gemma":[0.00010704801,0.0012267983,0.068678275,0.000036465877,0.00010055817,0.0046264436,0.0002492266,0.0009726974,0.9147314,0.00037803603,0.0088710375,0.000021984597],"about_ca_topic_score_codex":0.00030046163,"about_ca_topic_score_gemma":0.0003451135,"teacher_disagreement_score":0.001391372,"about_ca_system_score_codex":0.0001818235,"about_ca_system_score_gemma":0.00012441764,"threshold_uncertainty_score":0.004654646},"labels":[],"label_agreement":null},{"id":"W58915119","doi":"10.4049/jimmunol.178.supp.97.5","title":"The adhesion molecules CD44 and hyaluronan, not physical trapping, are responsible for neutrophil sequestration in inflamed liver sinusoids (97.5)","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Calgary","funders":"","keywords":"Cell adhesion molecule; Intravital microscopy; CD44; Integrin; Adhesion; Cell biology; Immunology; Biology; Microcirculation; Chemistry; Medicine; In vitro; Receptor; Internal medicine; Biochemistry","score_opus":0.016566340544739013,"score_gpt":0.254278281134972,"score_spread":0.23771194059023296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W58915119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556893,0.0013029276,0.0019536852,0.0000788275,0.000008985344,0.0000104520495,0.00008072963,0.000017672744,0.0009777313],"genre_scores_gemma":[0.99689865,0.00030514895,0.00091177796,0.000030401596,0.000005733084,0.000008681708,0.000119945966,0.0000033253439,0.0017162813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989176,0.000014052262,0.000005854548,0.000013292569,0.000030347095,0.000044593347],"domain_scores_gemma":[0.99992466,0.000011041992,0.000020408334,0.000008133162,0.000012375564,0.000023418605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010303224,0.00018128479,0.00015053913,0.00015658962,0.00011896992,0.00030006687,0.00012328156,0.00020835796,0.0019265091],"category_scores_gemma":[0.00008865577,0.00010593193,0.00013054878,0.00009404002,0.00017499946,0.00015995845,0.00015967697,0.0002707578,0.00023108789],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007500683,0.000007281418,0.0005898197,0.000021024722,0.000003353222,0.000031484346,0.000004990686,0.0000158527,0.9977996,0.00009170671,0.000027995678,0.0013319023],"study_design_scores_gemma":[0.000018976752,0.00020380385,0.02549933,0.0000065056524,0.00002727544,0.0005494443,0.000047589045,0.0010379727,0.97057223,0.00007105585,0.0019630913,0.0000027427707],"about_ca_topic_score_codex":0.0008253433,"about_ca_topic_score_gemma":0.0010133402,"teacher_disagreement_score":0.0019265091,"about_ca_system_score_codex":0.00024558525,"about_ca_system_score_gemma":0.00014154261,"threshold_uncertainty_score":0.006444812},"labels":[],"label_agreement":null},{"id":"W59177652","doi":"10.4049/jimmunol.182.supp.94.6","title":"Differentiation of blood monocytes to dendritic cells following reverse transmigration across the blood-brain barrier (94.6)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"CD14; Neuroinflammation; Microglia; Biology; Cell biology; Dendritic cell; Immunology; Molecular biology; C-C chemokine receptor type 7; Monocyte; Chemistry; Inflammation; Chemokine; Flow cytometry; Antigen","score_opus":0.00706192613987569,"score_gpt":0.23668723753644522,"score_spread":0.22962531139656953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W59177652","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9909293,0.0026054624,0.0031632183,0.00006454977,0.00004803886,0.00006782082,0.00052073656,0.000043083193,0.0025576511],"genre_scores_gemma":[0.989735,0.0012936385,0.0038379827,0.00012848576,0.000025316545,0.00005835121,0.0007679554,0.00001154218,0.0041416194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983263,0.000039228864,0.00001961575,0.000026966489,0.000030362004,0.000051088216],"domain_scores_gemma":[0.9999186,0.0000120296745,0.000013028286,0.0000099917515,0.000027219965,0.000019277413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017189396,0.00019266496,0.0001811032,0.00011673186,0.000106001855,0.0002904883,0.00006866674,0.00020523358,0.0016832319],"category_scores_gemma":[0.00013286812,0.00008635328,0.00017612638,0.00012304068,0.000073246665,0.00008493357,0.00014643869,0.00041141175,0.0011420393],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027222582,0.000027698454,0.00065123755,0.00006841345,0.000003686244,0.00014122257,0.0000445566,0.000023294271,0.99583167,0.00009109636,0.00007639019,0.002768455],"study_design_scores_gemma":[0.000068159774,0.0010098,0.026322957,0.00005820948,0.000039942628,0.0011764391,0.00019515974,0.0009777815,0.9613189,0.00014211406,0.008682328,0.000008178778],"about_ca_topic_score_codex":0.00046476384,"about_ca_topic_score_gemma":0.00048401835,"teacher_disagreement_score":0.0016832319,"about_ca_system_score_codex":0.00010478991,"about_ca_system_score_gemma":0.00011417789,"threshold_uncertainty_score":0.00563097},"labels":[],"label_agreement":null},{"id":"W602667689","doi":"10.1096/fasebj.20.5.a1450-d","title":"RU38486 influences the core temperature response of near‐term pregnant rats to intraperitoneal administration of lipopolysaccharide","year":2006,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipopolysaccharide; Term (time); Core temperature; Core (optical fiber); Administration (probate law); Medicine; Chemistry; Anesthesia; Endocrinology; Physics","score_opus":0.01156003017389131,"score_gpt":0.2521851548631309,"score_spread":0.2406251246892396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W602667689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99811006,0.00053098594,0.0005808777,0.000100465346,0.000024006848,0.000012320481,0.00013428232,0.00006888353,0.00043802627],"genre_scores_gemma":[0.99610305,0.00077416416,0.0009328807,0.0000568526,0.000021775037,0.000048876933,0.00020449622,0.00001703494,0.0018410058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988234,0.000024380231,0.0000091476095,0.00002424205,0.000021736445,0.000038131697],"domain_scores_gemma":[0.99974126,0.000025548998,0.0001027206,0.000029490913,0.000015254883,0.000085688385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012942123,0.00045854208,0.00036736447,0.00021543898,0.000102887825,0.00017871364,0.000202318,0.00024759874,0.0012999207],"category_scores_gemma":[0.00026955237,0.00021675166,0.00023049003,0.00008901037,0.0003321375,0.00015651752,0.00013683658,0.000875882,0.0002968218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020751732,0.00020226344,0.00044111753,0.000032955522,0.0000070117862,0.00009529942,0.00004074054,0.000077474484,0.99405825,0.000075213116,0.00004187438,0.0028526345],"study_design_scores_gemma":[0.00014248643,0.009305702,0.014801394,0.000015879046,0.00003943133,0.00030339847,0.00010247703,0.0009929333,0.97268933,0.00010228518,0.0014871907,0.000017438373],"about_ca_topic_score_codex":0.00048751128,"about_ca_topic_score_gemma":0.0007009923,"teacher_disagreement_score":0.0012999207,"about_ca_system_score_codex":0.00017264298,"about_ca_system_score_gemma":0.00022087133,"threshold_uncertainty_score":0.0043486357},"labels":[],"label_agreement":null},{"id":"W63073187","doi":"10.1007/978-1-4419-9088-4_1","title":"Lipopolysaccharides of Pseudomonas aeruginosa","year":2004,"lang":"eo","type":"book-chapter","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Pseudomonas aeruginosa; Lipopolysaccharide; Bacterial outer membrane; Microbiology; Innate immune system; CD14; Proinflammatory cytokine; TLR4; Bacteria; Immune system; Tumor necrosis factor alpha; Receptor; Toll-like receptor; Lipid A; Bacterial cell structure; Biology; Chemistry; Cell biology; Inflammation; Immunology; Biochemistry; Escherichia coli","score_opus":0.014514315857794165,"score_gpt":0.22838472750539077,"score_spread":0.2138704116475966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W63073187","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019232206,0.66493994,0.019843819,0.0064481315,0.0082512945,0.00011911968,0.00029632705,0.00018725901,0.28068197],"genre_scores_gemma":[0.04169639,0.4964738,0.009026424,0.0035619398,0.0025686438,0.00014914104,0.00039661632,0.00008480555,0.44604218],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99995565,0.000006752033,0.0000023716425,0.0000040836385,0.00002454959,0.0000065317745],"domain_scores_gemma":[0.9999732,0.00001104829,0.0000026437015,0.0000026290334,0.0000058344344,0.0000046958858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011129168,0.0006831484,0.00027319737,0.0006510181,0.0002576964,0.00065264513,0.00031546457,0.00047908802,0.0037605944],"category_scores_gemma":[0.00014821845,0.00017141375,0.00017158758,0.0005923282,0.0004834696,0.0010431916,0.00061738683,0.0014113615,0.0019050908],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012257388,0.00015449773,0.0001971591,0.0018474776,0.000014123859,0.0009170905,0.000678538,0.0009891508,0.14171071,0.16787617,0.06360807,0.62188447],"study_design_scores_gemma":[0.000006207064,0.00006305037,0.00058328157,0.00034983,0.00000833022,0.00059965457,0.00013095349,0.00013555917,0.014485737,0.03413151,0.9494953,0.0000106206],"about_ca_topic_score_codex":0.00070462824,"about_ca_topic_score_gemma":0.00085030677,"teacher_disagreement_score":0.0037605944,"about_ca_system_score_codex":0.00042383993,"about_ca_system_score_gemma":0.00038561504,"threshold_uncertainty_score":0.012580454},"labels":[],"label_agreement":null},{"id":"W67208262","doi":"","title":"Function of NOD-like receptors in immunity and disease.","year":2010,"lang":"en","type":"article","venue":"PubMed","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Innate immune system; Nod; Immunity; Inflammasome; Biology; Pattern recognition receptor; Receptor; Acquired immune system; Effector; Immunology; Cell biology; Priming (agriculture); Function (biology); Disease; Neuroscience; Immune system; Inflammation; Medicine; Genetics; Gene","score_opus":0.007948623637134057,"score_gpt":0.18808656160077458,"score_spread":0.18013793796364053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W67208262","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005365349,0.97695696,0.002189247,0.0033613942,0.001398382,0.0000142932,0.00011386436,0.00005269673,0.010547707],"genre_scores_gemma":[0.14509918,0.8200393,0.005932316,0.0032871526,0.0021205517,0.00005758152,0.00045886612,0.000021255119,0.02298387],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998412,0.00004542788,0.000016129214,0.000026073907,0.000047488662,0.000023682445],"domain_scores_gemma":[0.9998714,0.000019752517,0.00002374961,0.0000071938834,0.000023667626,0.00005417429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007365222,0.00055984326,0.00044214996,0.0005287373,0.00021648151,0.0007780215,0.00031755693,0.00065650954,0.002698345],"category_scores_gemma":[0.00031347325,0.00009138736,0.00022097581,0.00038240562,0.00068735116,0.00084035314,0.0007825113,0.0008660379,0.0015508403],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011710557,0.00012394051,0.0025610817,0.005627364,0.00014540392,0.0027979896,0.00044772102,0.00051094097,0.11163491,0.06429318,0.048190773,0.76249564],"study_design_scores_gemma":[0.000112534435,0.00050663704,0.0059045334,0.0011484261,0.00007775528,0.0103298575,0.0002455806,0.00042593194,0.014191377,0.024190148,0.94282955,0.00003770312],"about_ca_topic_score_codex":0.0001739152,"about_ca_topic_score_gemma":0.00018940688,"teacher_disagreement_score":0.002698345,"about_ca_system_score_codex":0.0003625493,"about_ca_system_score_gemma":0.00047791147,"threshold_uncertainty_score":0.009026825},"labels":[],"label_agreement":null},{"id":"W67524005","doi":"10.1007/978-1-4614-4118-2_15","title":"Innate Immunity as Orchestrator of Bone Marrow Homing for Hematopoietic Stem/Progenitor Cells","year":2012,"lang":"en","type":"review","venue":"Advances in experimental medicine and biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Institutes of Health","keywords":"Homing (biology); Haematopoiesis; Bone marrow; Stem cell; Innate immune system; Progenitor cell; Immunity; Hematopoietic stem cell; Immunology; Biology; Cell biology; Immune system","score_opus":0.05584767219206285,"score_gpt":0.3737080444162952,"score_spread":0.31786037222423236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W67524005","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003953573,0.9977399,0.00049596437,0.00023162861,0.00024990342,0.0000056108056,0.000019828678,0.000014515331,0.0008473972],"genre_scores_gemma":[0.0022870875,0.99569905,0.0005625017,0.00017461882,0.00023353702,0.000009802745,0.000056155302,0.0000028538282,0.00097434415],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985313,0.000016668871,0.000020429343,0.000032931486,0.000057593752,0.000019321613],"domain_scores_gemma":[0.9998951,0.00003271787,0.000022254759,0.000004548927,0.000028416536,0.000016956608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041358845,0.00074359553,0.001120902,0.00088239025,0.00018458153,0.0009507427,0.0008093154,0.0008233532,0.0012504881],"category_scores_gemma":[0.00029476034,0.00020939378,0.00023436808,0.0008747514,0.0005170696,0.00089452823,0.0006877381,0.0013869096,0.0013097897],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012637772,0.000047057114,0.00025323642,0.005997148,0.00003650994,0.00031031674,0.000038293627,0.00027956231,0.019782051,0.005054723,0.014748389,0.9533263],"study_design_scores_gemma":[0.000028845387,0.0001240734,0.0017154157,0.001417088,0.00011346398,0.0017362838,0.00008740342,0.00021100203,0.010094599,0.003433499,0.9810104,0.000028004739],"about_ca_topic_score_codex":0.00048068905,"about_ca_topic_score_gemma":0.0008350031,"teacher_disagreement_score":0.0012504881,"about_ca_system_score_codex":0.0005531576,"about_ca_system_score_gemma":0.0008282859,"threshold_uncertainty_score":0.004183233},"labels":[],"label_agreement":null},{"id":"W6901642010","doi":"10.60692/44tmt-zj686","title":"Potential mediators of in ovo delivered double stranded (ds) RNA-induced innate response against low pathogenic avian influenza virus infection","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"","keywords":"In ovo; TLR3; Interferon; Innate immune system; RNA silencing; Virus; Influenza A virus subtype H5N1; Interferon type I; Macrophage","score_opus":0.016789019465094864,"score_gpt":0.2232258006999267,"score_spread":0.20643678123483183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901642010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926628,0.0032646826,0.0020357259,0.00014908951,0.00011155273,0.00008698993,0.0003351994,0.000028202201,0.0013256617],"genre_scores_gemma":[0.992067,0.0020210089,0.0020951342,0.00020741404,0.000037075493,0.00013844717,0.00044563695,0.000013849451,0.0029744226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989045,0.00001850486,0.000008320392,0.000023892686,0.000022013639,0.000036751786],"domain_scores_gemma":[0.99988997,0.000023610895,0.00004407505,0.000006247213,0.000013411423,0.000022538226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014815896,0.000266772,0.0002542924,0.0001438851,0.00010249475,0.0002903371,0.00013252774,0.00037214014,0.0011173998],"category_scores_gemma":[0.00014627582,0.00009433551,0.00022699576,0.000046987505,0.00022330647,0.00020285384,0.00018134217,0.0004995205,0.00020068437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028160043,0.000040510706,0.00027778908,0.00011235892,0.0000035054563,0.00007992402,0.000024975496,0.000018870263,0.99811053,0.000034714314,0.000025261874,0.0009899695],"study_design_scores_gemma":[0.000061746,0.0030217755,0.015763946,0.00004799712,0.00005326616,0.00046751142,0.00028030522,0.00045731675,0.9758246,0.000093082206,0.0039195577,0.00000895814],"about_ca_topic_score_codex":0.00013996,"about_ca_topic_score_gemma":0.00023161682,"teacher_disagreement_score":0.0011173998,"about_ca_system_score_codex":0.00013061888,"about_ca_system_score_gemma":0.0001332264,"threshold_uncertainty_score":0.0037381053},"labels":[],"label_agreement":null},{"id":"W6901684341","doi":"10.60692/3zb2d-dm818","title":"Toll-like receptor 9 and 4 gene polymorphisms in susceptibility and severity of malaria: a meta-analysis of genetic association studies","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Malaria; TLR9; Allele; Genetic association; Genetic predisposition; Plasmodium falciparum; Allele frequency; Toll-like receptor","score_opus":0.04116136619377514,"score_gpt":0.2351793782621878,"score_spread":0.19401801206841265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901684341","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.093236595,0.89830196,0.0045908163,0.0006399463,0.00046273632,0.00034046365,0.0017505733,0.0001320908,0.00054474024],"genre_scores_gemma":[0.8511606,0.13983752,0.0048359246,0.00063628075,0.0003275461,0.0007467043,0.0018094991,0.00009856661,0.0005474223],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.98267555,0.009680911,0.0033630757,0.002635735,0.0010863515,0.000558284],"domain_scores_gemma":[0.9705625,0.022070676,0.0033510819,0.0019389322,0.0015649016,0.00051178026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.020205043,0.0030468686,0.014334031,0.005137939,0.000979823,0.0035217179,0.0024066942,0.0024067562,0.0031589048],"category_scores_gemma":[0.028338715,0.0017002821,0.05347239,0.008303664,0.00073458126,0.0013993664,0.002005214,0.0025825915,0.00030783727],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00390976,0.000029205954,0.029614132,0.021508044,0.9398596,0.00023762132,0.000056913497,0.0008753472,0.0003445596,0.00008751518,0.00028651918,0.0031907898],"study_design_scores_gemma":[0.00040900716,0.0001581669,0.011804958,0.0011777035,0.985168,0.000105528095,0.00003171394,0.0005362326,0.000097529424,0.0001634222,0.00033147528,0.000016238573],"about_ca_topic_score_codex":0.0061914343,"about_ca_topic_score_gemma":0.007825053,"teacher_disagreement_score":0.020205043,"about_ca_system_score_codex":0.001544496,"about_ca_system_score_gemma":0.0019544973,"threshold_uncertainty_score":0.10685569},"labels":[],"label_agreement":null},{"id":"W6901830099","doi":"10.60692/xnz6w-wqj73","title":"Toll-like receptor 9 (-1237 T/C, -1486 T/C) and the risk of gastric cancer: a meta-analysis of genetic association studies","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Odds ratio; Confidence interval; Etiology; Genetic association; Cancer; Genotype; Ethnic group; Meta-analysis","score_opus":0.04397331965950292,"score_gpt":0.2441206535067944,"score_spread":0.2001473338472915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901830099","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030194633,0.96122116,0.0050069895,0.00065023964,0.00046381357,0.0006996133,0.0012150931,0.00010972307,0.00043868326],"genre_scores_gemma":[0.6319269,0.34722713,0.013338428,0.0012589779,0.00054138334,0.0026457638,0.0021715981,0.0001254502,0.0007643825],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.97989,0.011671517,0.0039743315,0.0023985791,0.0015423925,0.00052321726],"domain_scores_gemma":[0.9783844,0.016022233,0.002402234,0.0012488563,0.0015479875,0.00039431403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02461638,0.0042043454,0.017821074,0.0087067,0.0011212218,0.004563925,0.002934243,0.0027193541,0.0030528784],"category_scores_gemma":[0.036907617,0.002110745,0.06995772,0.010161132,0.0008472052,0.0019390122,0.0022917597,0.0025966712,0.00033505453],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020970048,0.00003383198,0.0084630195,0.035936896,0.9486326,0.0001556007,0.000046346897,0.00073870516,0.00029166063,0.00008092175,0.00026413548,0.0032592267],"study_design_scores_gemma":[0.00032390805,0.00011336644,0.0029037492,0.0017971756,0.99383885,0.000058633737,0.000022564742,0.00034267313,0.000084719315,0.00015916202,0.00034139675,0.000013925658],"about_ca_topic_score_codex":0.0063830265,"about_ca_topic_score_gemma":0.009689415,"teacher_disagreement_score":0.02461638,"about_ca_system_score_codex":0.002415882,"about_ca_system_score_gemma":0.0033969192,"threshold_uncertainty_score":0.13018537},"labels":[],"label_agreement":null},{"id":"W6901980725","doi":"10.6084/m9.figshare.12032991","title":"Additional file 2 of Sustained exposure to systemic endotoxin triggers chemokine induction in the brain followed by a rapid influx of leukocytes","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chemokine; Gene expression; Receptor; Chemokine receptor; Gene; Chemotaxis; CXC chemokine receptors; CCR1","score_opus":0.014385211692415313,"score_gpt":0.21044639270948248,"score_spread":0.19606118101706718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901980725","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023239583,0.000030230789,0.00052719715,0.00010128668,0.000059005783,0.00012721789,0.99732375,0.0007124322,0.00088643207],"genre_scores_gemma":[0.008218862,0.00021580786,0.007185693,0.0007041943,0.0001383691,0.0028032183,0.9661896,0.0020855893,0.01245866],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99911994,0.000105849605,0.0001323293,0.00022198659,0.00027468914,0.0001452081],"domain_scores_gemma":[0.9841532,0.011464857,0.0008665822,0.00088427425,0.0020117017,0.0006194392],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017933138,0.0015591675,0.001996174,0.0024078453,0.0016551511,0.0022671388,0.0023929884,0.0017306316,0.9154591],"category_scores_gemma":[0.019861542,0.0008704363,0.0010899123,0.0033547156,0.00047674234,0.0020036965,0.0012917031,0.0013019708,0.24671067],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080962264,0.00024436027,0.0022736276,0.006371723,0.000075719996,0.00018375558,0.00012138452,0.000497189,0.0010840918,0.00077042065,0.9772348,0.010333291],"study_design_scores_gemma":[0.006659835,0.0007803817,0.033115383,0.0054642786,0.00028346668,0.0011792823,0.00074553187,0.0026022699,0.0043365997,0.011441249,0.93306845,0.00032320747],"about_ca_topic_score_codex":0.0058679855,"about_ca_topic_score_gemma":0.010415527,"teacher_disagreement_score":0.9154591,"about_ca_system_score_codex":0.0010967734,"about_ca_system_score_gemma":0.0022298426,"threshold_uncertainty_score":0.12058735},"labels":[],"label_agreement":null},{"id":"W6902073318","doi":"10.6084/m9.figshare.24070107.v1","title":"Additional file 1 of Higher plasma interleukin − 6 levels are associated with lung cavitation in drug-resistant tuberculosis","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Tuberculosis; Table (database); Mycobacterium tuberculosis; Interleukin; Lung; Interleukin 6; Interleukin 9","score_opus":0.018470020008400135,"score_gpt":0.23010590730187172,"score_spread":0.21163588729347158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902073318","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004618887,0.000051148683,0.00019339591,0.00016620685,0.00005209824,0.00008451816,0.99804854,0.0001711265,0.0007711121],"genre_scores_gemma":[0.0306395,0.00043076667,0.006201328,0.0022649597,0.0005910447,0.003161715,0.9363754,0.0012001174,0.019135183],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.999243,0.000133638,0.00015946277,0.00020726009,0.00013476913,0.000121892015],"domain_scores_gemma":[0.9665968,0.027111374,0.002248486,0.0014542049,0.001958432,0.00063085096],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012562159,0.0012265746,0.0015975405,0.0019095616,0.000825269,0.0016586494,0.002021982,0.0017720415,0.89725333],"category_scores_gemma":[0.03614888,0.00061853003,0.0018154667,0.0024864587,0.00035603243,0.0019832926,0.0010117361,0.00088328234,0.16341081],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011511972,0.0002652257,0.00968591,0.009162993,0.00024145987,0.00023338615,0.00010310317,0.0005251679,0.00024699976,0.0008280509,0.96043926,0.017117254],"study_design_scores_gemma":[0.025782194,0.0014274883,0.2042966,0.01779482,0.0014551656,0.0041142725,0.0011572872,0.006361044,0.002155812,0.0284737,0.70637137,0.0006101444],"about_ca_topic_score_codex":0.005061187,"about_ca_topic_score_gemma":0.008079169,"teacher_disagreement_score":0.89725333,"about_ca_system_score_codex":0.0007234553,"about_ca_system_score_gemma":0.0013244881,"threshold_uncertainty_score":0.14655566},"labels":[],"label_agreement":null},{"id":"W6902093604","doi":"10.6084/m9.figshare.12032991.v1","title":"Additional file 2 of Sustained exposure to systemic endotoxin triggers chemokine induction in the brain followed by a rapid influx of leukocytes","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chemokine; Gene expression; Receptor; Chemokine receptor; Gene; Chemotaxis; CXC chemokine receptors; CCR1","score_opus":0.014385211692415313,"score_gpt":0.21044639270948248,"score_spread":0.19606118101706718,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902093604","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023239583,0.000030230789,0.00052719715,0.00010128668,0.000059005783,0.00012721789,0.99732375,0.0007124322,0.00088643207],"genre_scores_gemma":[0.008218862,0.00021580786,0.007185693,0.0007041943,0.0001383691,0.0028032183,0.9661896,0.0020855893,0.01245866],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911994,0.000105849605,0.0001323293,0.00022198659,0.00027468914,0.0001452081],"domain_scores_gemma":[0.9841532,0.011464857,0.0008665822,0.00088427425,0.0020117017,0.0006194392],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017933138,0.0015591675,0.001996174,0.0024078453,0.0016551511,0.0022671388,0.0023929884,0.0017306316,0.9154591],"category_scores_gemma":[0.019861542,0.0008704363,0.0010899123,0.0033547156,0.00047674234,0.0020036965,0.0012917031,0.0013019708,0.24671067],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080962264,0.00024436027,0.0022736276,0.006371723,0.000075719996,0.00018375558,0.00012138452,0.000497189,0.0010840918,0.00077042065,0.9772348,0.010333291],"study_design_scores_gemma":[0.006659835,0.0007803817,0.033115383,0.0054642786,0.00028346668,0.0011792823,0.00074553187,0.0026022699,0.0043365997,0.011441249,0.93306845,0.00032320747],"about_ca_topic_score_codex":0.0058679855,"about_ca_topic_score_gemma":0.010415527,"teacher_disagreement_score":0.9154591,"about_ca_system_score_codex":0.0010967734,"about_ca_system_score_gemma":0.0022298426,"threshold_uncertainty_score":0.12058735},"labels":[],"label_agreement":null},{"id":"W6902203314","doi":"10.6084/m9.figshare.14782873","title":"Additional file 3 of Red blood cell transfusion in animal models of acute brain injuries: a systematic review protocol","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; University of Manitoba; Centre hospitalier universitaire de Québec; Ottawa Hospital; Research Institute in Oncology and Hematology; Western University; Université de Montréal; Université Laval","funders":"","keywords":"Protocol (science); Blood transfusion; Risk assessment; Patient data; MEDLINE; Red blood cell","score_opus":0.013062643387722544,"score_gpt":0.24652745179008023,"score_spread":0.2334648084023577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902203314","genre_codex":"dataset","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044005696,0.0005243468,0.0015818657,0.00078052527,0.00013930572,0.01662309,0.97710514,0.000665006,0.0021405125],"genre_scores_gemma":[0.01356487,0.0022300973,0.03161875,0.004202678,0.00043153676,0.5900941,0.32886073,0.0013283055,0.027668964],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99330443,0.0019978562,0.0026521592,0.000752237,0.00095475046,0.00033858835],"domain_scores_gemma":[0.86495334,0.105073854,0.0132264085,0.0035015692,0.012219347,0.0010254821],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.017018335,0.0017207413,0.003648203,0.0075770766,0.0010902637,0.0029705367,0.0019751631,0.0020304285,0.8024155],"category_scores_gemma":[0.12493977,0.0015614876,0.0039046712,0.009338171,0.00071674376,0.0037257366,0.0019845748,0.0014894578,0.05398692],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019698036,0.0001118038,0.0013516699,0.3263512,0.00097284553,0.00011465157,0.00031221335,0.0008972133,0.00026732057,0.003290943,0.6401138,0.024246579],"study_design_scores_gemma":[0.0398064,0.0007965053,0.019361299,0.21317826,0.004231376,0.0006045801,0.0008585928,0.0032954272,0.0014004156,0.027653128,0.6882444,0.0005695373],"about_ca_topic_score_codex":0.005840141,"about_ca_topic_score_gemma":0.012599368,"teacher_disagreement_score":0.8024155,"about_ca_system_score_codex":0.0042932928,"about_ca_system_score_gemma":0.0087456815,"threshold_uncertainty_score":0.28183025},"labels":[],"label_agreement":null},{"id":"W6902282943","doi":"10.6084/m9.figshare.4456550.v2","title":"Additional file 4 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Systemic inflammatory response syndrome; MEDLINE; Disease; Immune system","score_opus":0.0203660874685985,"score_gpt":0.2755802307416625,"score_spread":0.255214143273064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902282943","genre_codex":"dataset","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012283007,0.00077706884,0.00018256826,0.00059000903,0.00014873697,0.0004457076,0.9958209,0.00016282212,0.0017494281],"genre_scores_gemma":[0.011349327,0.00957075,0.00887971,0.0047947876,0.0009383312,0.012502663,0.9064906,0.0009267805,0.04454702],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.9987425,0.00025317277,0.0004343762,0.00019269667,0.0002394465,0.00013792295],"domain_scores_gemma":[0.9533476,0.03788941,0.0026570503,0.00071305013,0.0049024164,0.00049037585],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0036861503,0.0015224636,0.0021070102,0.0067913923,0.0008130148,0.0024956176,0.002202565,0.0018439507,0.8542167],"category_scores_gemma":[0.044157155,0.0008473675,0.0032991986,0.008319987,0.00045269894,0.0037008317,0.0018020716,0.001273625,0.07881046],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069688255,0.000046629837,0.001064469,0.17409097,0.0002858184,0.00014277497,0.00017413293,0.00032619733,0.0001603076,0.0011886436,0.80166996,0.020153198],"study_design_scores_gemma":[0.004088232,0.00020503253,0.014401861,0.1494322,0.0016259908,0.00064241077,0.0006729252,0.0004670216,0.00053745555,0.005968944,0.8218014,0.00015643817],"about_ca_topic_score_codex":0.012271049,"about_ca_topic_score_gemma":0.018492209,"teacher_disagreement_score":0.8542167,"about_ca_system_score_codex":0.0022735687,"about_ca_system_score_gemma":0.005044945,"threshold_uncertainty_score":0.20794213},"labels":[],"label_agreement":null},{"id":"W6902351529","doi":"10.6084/m9.figshare.26650398.v1","title":"Additional file 1 of Nicotinamide mononucleotide as a therapeutic agent to alleviate multi-organ failure in sepsis","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Phagocytosis; Sepsis; Flow cytometry; Cytokine; Nicotinamide mononucleotide; Table (database)","score_opus":0.02058896533396095,"score_gpt":0.25387002169757733,"score_spread":0.23328105636361637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902351529","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00027732254,0.00010011156,0.0004890659,0.00024442794,0.000070994465,0.0003264808,0.9966538,0.00036346063,0.0014743682],"genre_scores_gemma":[0.01641284,0.0008654936,0.008383902,0.0021806804,0.00034626364,0.007627956,0.9412356,0.0013647807,0.021582425],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992893,0.00013218018,0.00015428379,0.00016534266,0.00016618826,0.00009277271],"domain_scores_gemma":[0.9863697,0.010038791,0.00092679844,0.000649492,0.0015765501,0.00043856876],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016499063,0.0009975305,0.0016223344,0.0014512492,0.00075510406,0.0016317103,0.0014467494,0.0012637145,0.89653814],"category_scores_gemma":[0.021644704,0.00052023504,0.001031196,0.00229696,0.0002618221,0.0013173153,0.00078653416,0.0009806514,0.15134943],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017459746,0.00023935825,0.001948684,0.009749765,0.00009533634,0.00014629848,0.000068451445,0.00043842255,0.00034648788,0.0008034589,0.95901644,0.025401304],"study_design_scores_gemma":[0.014938595,0.0013200594,0.02957528,0.009001247,0.0004302467,0.00114828,0.00038243202,0.0019636797,0.0021592712,0.010821174,0.92806345,0.00019618902],"about_ca_topic_score_codex":0.0041430574,"about_ca_topic_score_gemma":0.0068539004,"teacher_disagreement_score":0.89653814,"about_ca_system_score_codex":0.0011516041,"about_ca_system_score_gemma":0.0020798894,"threshold_uncertainty_score":0.14757574},"labels":[],"label_agreement":null},{"id":"W6912161306","doi":"10.5281/zenodo.15218787","title":"Thereva foxi Cole 1923","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal British Columbia Museum","funders":"","keywords":"Glacier; Mile; Mountain range (options); Summit; Boreal; Pavilion; Mount","score_opus":0.01692222566888225,"score_gpt":0.23811555312461405,"score_spread":0.2211933274557318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6912161306","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031883623,0.020423103,0.0028010828,0.0012033952,0.001600142,0.00044650794,0.018177554,0.00080209214,0.92266256],"genre_scores_gemma":[0.31852838,0.013259635,0.008503741,0.003855319,0.0010772796,0.0004882286,0.026349911,0.00033988967,0.62759763],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99969614,0.000023749457,0.000020948093,0.00010413013,0.00009632043,0.000058700305],"domain_scores_gemma":[0.9998288,0.000025623269,0.00004169341,0.000021396632,0.000054956265,0.000027468346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023247991,0.0011500245,0.00053201424,0.0024698784,0.0027406956,0.0011124432,0.0007986443,0.0009120757,0.102050826],"category_scores_gemma":[0.00044137874,0.00036849795,0.000325582,0.0014036408,0.00063975365,0.0014383037,0.001462468,0.0008274174,0.044779506],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026331117,0.00010560936,0.016880855,0.00058613985,0.000051626466,0.00085361686,0.0013933473,0.00016091559,0.004998048,0.0056713186,0.34078687,0.62824833],"study_design_scores_gemma":[0.000015390517,0.000047833375,0.031851903,0.00030422365,0.000037434264,0.0006883104,0.00035541496,0.00012092956,0.00049923686,0.0005008558,0.96556735,0.0000111659365],"about_ca_topic_score_codex":0.04642501,"about_ca_topic_score_gemma":0.0731811,"teacher_disagreement_score":0.102050826,"about_ca_system_score_codex":0.0013572094,"about_ca_system_score_gemma":0.00060047314,"threshold_uncertainty_score":0.341394},"labels":[],"label_agreement":null},{"id":"W6912266976","doi":"10.5281/zenodo.3541299","title":"NPA_ref711","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Lipid A; Lipopolysaccharide; Antagonist; Blocking (statistics)","score_opus":0.01621434576774545,"score_gpt":0.2169550574507213,"score_spread":0.20074071168297586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6912266976","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005122957,0.0049745804,0.0012852402,0.005867025,0.05569159,0.00071155094,0.23099619,0.0038532906,0.6961082],"genre_scores_gemma":[0.004811554,0.006166538,0.002895099,0.004157442,0.0076128207,0.0005868326,0.22629163,0.0027720619,0.74470603],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982362,0.00009869346,0.00020396081,0.0002512369,0.00096134323,0.00024855038],"domain_scores_gemma":[0.995355,0.0005591958,0.0002118474,0.00040151874,0.00267326,0.00079919415],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00087585486,0.0017331805,0.002782298,0.009127259,0.004121815,0.008812371,0.0038984832,0.0046524284,0.91523975],"category_scores_gemma":[0.0059402357,0.0014781366,0.0021396575,0.010536168,0.0011128236,0.0066667865,0.0039691036,0.002885084,0.8447735],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004977456,0.00003853965,0.00009393736,0.001080964,0.000009639222,0.000105865794,0.000018906892,0.000036475765,0.00037017278,0.0012709579,0.9776628,0.019261966],"study_design_scores_gemma":[0.000033022414,0.000014689538,0.0007283641,0.00031450775,0.000008106038,0.00013533354,0.000025077601,0.000035255543,0.00026486788,0.0007831395,0.9976406,0.000017093515],"about_ca_topic_score_codex":0.010395405,"about_ca_topic_score_gemma":0.009732855,"teacher_disagreement_score":0.08476025,"about_ca_system_score_codex":0.003505572,"about_ca_system_score_gemma":0.005188652,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W6920673525","doi":"10.6084/m9.figshare.12032997","title":"Additional file 3 of Sustained exposure to systemic endotoxin triggers chemokine induction in the brain followed by a rapid influx of leukocytes","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council","keywords":"Chemokine; Gene expression; Gene; Real-time polymerase chain reaction; Messenger RNA; CCL5; Cytokine; Gating","score_opus":0.014626338197518634,"score_gpt":0.21058761628639666,"score_spread":0.19596127808887803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920673525","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002279338,0.000027544387,0.0004042497,0.0000909476,0.000041203217,0.000098899276,0.997735,0.00062149775,0.0007526419],"genre_scores_gemma":[0.009051996,0.00023734452,0.006402322,0.000685509,0.00013391564,0.0026311888,0.96828175,0.0018792883,0.010696763],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913293,0.00009186254,0.00013059587,0.00021486614,0.00027859682,0.00015120202],"domain_scores_gemma":[0.9869645,0.009387363,0.00081579236,0.0006689589,0.0016619649,0.000501316],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016951059,0.0017104212,0.0019636557,0.0022038785,0.0015699787,0.002251255,0.0024575419,0.0017326585,0.91274226],"category_scores_gemma":[0.019813027,0.0008065842,0.0011116771,0.0031492633,0.0004340262,0.002005886,0.001446553,0.0011956579,0.22553128],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009540905,0.00022356263,0.002967705,0.0073225913,0.00008941204,0.00023036226,0.0001445677,0.0005533669,0.0012044978,0.00078689546,0.97405916,0.011463754],"study_design_scores_gemma":[0.007949591,0.0008820218,0.0361703,0.0065606646,0.0003425251,0.0014814354,0.0008729256,0.0033714238,0.005111381,0.012360003,0.92454547,0.00035232032],"about_ca_topic_score_codex":0.007281129,"about_ca_topic_score_gemma":0.012994364,"teacher_disagreement_score":0.91274226,"about_ca_system_score_codex":0.0011569627,"about_ca_system_score_gemma":0.0023204132,"threshold_uncertainty_score":0.124462485},"labels":[],"label_agreement":null},{"id":"W6920800973","doi":"10.6084/m9.figshare.12032997.v1","title":"Additional file 3 of Sustained exposure to systemic endotoxin triggers chemokine induction in the brain followed by a rapid influx of leukocytes","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chemokine; Gene expression; Gene; Real-time polymerase chain reaction; Messenger RNA; CCL5; Cytokine; Gating","score_opus":0.014626338197518634,"score_gpt":0.21058761628639666,"score_spread":0.19596127808887803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920800973","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002279338,0.000027544387,0.0004042497,0.0000909476,0.000041203217,0.000098899276,0.997735,0.00062149775,0.0007526419],"genre_scores_gemma":[0.009051996,0.00023734452,0.006402322,0.000685509,0.00013391564,0.0026311888,0.96828175,0.0018792883,0.010696763],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913293,0.00009186254,0.00013059587,0.00021486614,0.00027859682,0.00015120202],"domain_scores_gemma":[0.9869645,0.009387363,0.00081579236,0.0006689589,0.0016619649,0.000501316],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016951059,0.0017104212,0.0019636557,0.0022038785,0.0015699787,0.002251255,0.0024575419,0.0017326585,0.91274226],"category_scores_gemma":[0.019813027,0.0008065842,0.0011116771,0.0031492633,0.0004340262,0.002005886,0.001446553,0.0011956579,0.22553128],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009540905,0.00022356263,0.002967705,0.0073225913,0.00008941204,0.00023036226,0.0001445677,0.0005533669,0.0012044978,0.00078689546,0.97405916,0.011463754],"study_design_scores_gemma":[0.007949591,0.0008820218,0.0361703,0.0065606646,0.0003425251,0.0014814354,0.0008729256,0.0033714238,0.005111381,0.012360003,0.92454547,0.00035232032],"about_ca_topic_score_codex":0.007281129,"about_ca_topic_score_gemma":0.012994364,"teacher_disagreement_score":0.91274226,"about_ca_system_score_codex":0.0011569627,"about_ca_system_score_gemma":0.0023204132,"threshold_uncertainty_score":0.124462485},"labels":[],"label_agreement":null},{"id":"W6920835892","doi":"10.6084/m9.figshare.14782873.v1","title":"Additional file 3 of Red blood cell transfusion in animal models of acute brain injuries: a systematic review protocol","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of British Columbia; University of Manitoba; Centre hospitalier universitaire de Québec; Ottawa Hospital; Research Institute in Oncology and Hematology; Western University; Université de Montréal; Université Laval","funders":"","keywords":"Protocol (science); Blood transfusion; Risk assessment; Patient data; MEDLINE; Red blood cell","score_opus":0.013062643387722544,"score_gpt":0.24652745179008023,"score_spread":0.2334648084023577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6920835892","genre_codex":"dataset","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044005696,0.0005243468,0.0015818657,0.00078052527,0.00013930572,0.01662309,0.97710514,0.000665006,0.0021405125],"genre_scores_gemma":[0.01356487,0.0022300973,0.03161875,0.004202678,0.00043153676,0.5900941,0.32886073,0.0013283055,0.027668964],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.99330443,0.0019978562,0.0026521592,0.000752237,0.00095475046,0.00033858835],"domain_scores_gemma":[0.86495334,0.105073854,0.0132264085,0.0035015692,0.012219347,0.0010254821],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.017018335,0.0017207413,0.003648203,0.0075770766,0.0010902637,0.0029705367,0.0019751631,0.0020304285,0.8024155],"category_scores_gemma":[0.12493977,0.0015614876,0.0039046712,0.009338171,0.00071674376,0.0037257366,0.0019845748,0.0014894578,0.05398692],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019698036,0.0001118038,0.0013516699,0.3263512,0.00097284553,0.00011465157,0.00031221335,0.0008972133,0.00026732057,0.003290943,0.6401138,0.024246579],"study_design_scores_gemma":[0.0398064,0.0007965053,0.019361299,0.21317826,0.004231376,0.0006045801,0.0008585928,0.0032954272,0.0014004156,0.027653128,0.6882444,0.0005695373],"about_ca_topic_score_codex":0.005840141,"about_ca_topic_score_gemma":0.012599368,"teacher_disagreement_score":0.8024155,"about_ca_system_score_codex":0.0042932928,"about_ca_system_score_gemma":0.0087456815,"threshold_uncertainty_score":0.28183025},"labels":[],"label_agreement":null},{"id":"W6921337729","doi":"10.6084/m9.figshare.4456562.v2","title":"Additional file 2 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; MEDLINE; Systemic inflammatory response syndrome; Inflammation; Disease","score_opus":0.019837740925047646,"score_gpt":0.27497552459547964,"score_spread":0.255137783670432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6921337729","genre_codex":"dataset","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013212828,0.0017720023,0.00019361459,0.0006810653,0.00018537258,0.0006752344,0.9943557,0.00016515012,0.0018398772],"genre_scores_gemma":[0.011398171,0.022567427,0.011532178,0.005699412,0.0011601761,0.02077996,0.88276166,0.00096541626,0.043135576],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.99830675,0.00034153854,0.00062457804,0.00024051835,0.0003255132,0.00016118327],"domain_scores_gemma":[0.94847554,0.0406528,0.0037026298,0.0007180593,0.005898568,0.00055241014],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0041014324,0.0019512827,0.0030438474,0.009671559,0.00084011327,0.0030308634,0.0025191116,0.0021024814,0.8194408],"category_scores_gemma":[0.05067182,0.0010539677,0.004567249,0.011701968,0.00048529063,0.0040986873,0.0021592078,0.001478799,0.0665979],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006819443,0.000042761636,0.00082719134,0.42524973,0.00051115494,0.00013077936,0.00017303784,0.0003410593,0.00017384438,0.0011852793,0.54948944,0.021193724],"study_design_scores_gemma":[0.004035789,0.000203299,0.010710654,0.32207108,0.0030300939,0.0005037816,0.0005911003,0.0004116697,0.00045693922,0.004897208,0.65293527,0.0001531888],"about_ca_topic_score_codex":0.01364372,"about_ca_topic_score_gemma":0.021757608,"teacher_disagreement_score":0.8194408,"about_ca_system_score_codex":0.0027288406,"about_ca_system_score_gemma":0.006707932,"threshold_uncertainty_score":0.25754583},"labels":[],"label_agreement":null},{"id":"W6928731481","doi":"10.3897/phytokeys..23806.plate21","title":"Plate 21 from: Bahls L, Boynton B, Johnston B (2018) Atlas of diatoms (Bacillariophyta) from diverse habitats in remote regions of western Canada. PhytoKeys 105: 1-186. https://doi.org/10.3897/phytokeys.105.23806","year":2018,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Atlas (anatomy); Scale (ratio); Myotis lucifugus; Habitat; Barrier island","score_opus":0.021954099871210764,"score_gpt":0.22447963763954612,"score_spread":0.20252553776833535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6928731481","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015788525,0.0028091746,0.0014423563,0.00070628565,0.0015412733,0.00019813237,0.09279894,0.002533375,0.8963917],"genre_scores_gemma":[0.0058675874,0.0021039878,0.0023042439,0.00015610248,0.00022148922,0.0000720103,0.054722946,0.0015039378,0.93304765],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996517,0.000010542561,0.000015424122,0.000056515008,0.0002050778,0.000060782277],"domain_scores_gemma":[0.9993461,0.000045803943,0.000040240062,0.00007982844,0.00031337392,0.00017474704],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021738828,0.0012189739,0.0006339726,0.0036599282,0.0021842758,0.002454361,0.0012309732,0.0006443347,0.5966151],"category_scores_gemma":[0.0008167226,0.0004573787,0.00056552223,0.0056378786,0.0009932024,0.0012246368,0.0017521816,0.0011887669,0.44240445],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005380996,0.000011278663,0.0005051718,0.00042869733,0.000004991173,0.00011415384,0.00022493613,0.00009637575,0.0010405733,0.0016693507,0.9115542,0.084296405],"study_design_scores_gemma":[0.000002314726,0.0000028286609,0.002048493,0.000067456625,0.0000017337738,0.00005025703,0.00005887213,0.000011573399,0.00021823018,0.00017429616,0.99736005,0.000003870047],"about_ca_topic_score_codex":0.20607877,"about_ca_topic_score_gemma":0.555355,"teacher_disagreement_score":0.79392123,"about_ca_system_score_codex":0.0029792022,"about_ca_system_score_gemma":0.004729056,"threshold_uncertainty_score":0.5753796},"labels":[],"label_agreement":null},{"id":"W6928817219","doi":"10.3897/zookeys.186.2491.map11","title":"Map 11 from: Webster R, Sweeney J, DeMerchant I (2012) New Staphylinidae (Coleoptera) records with new collection data from New Brunswick and eastern Canada: Tachyporinae. ZooKeys 186: 55-82. https://doi.org/10.3897/zookeys.186.2491","year":2012,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Data collection; Topographic map (neuroanatomy); Aerial photography; Projectile point","score_opus":0.04188016677753435,"score_gpt":0.23169821152296433,"score_spread":0.18981804474542996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6928817219","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010202859,0.0009724589,0.001036931,0.0005059303,0.0004914857,0.0003083976,0.7436755,0.0018447139,0.25014436],"genre_scores_gemma":[0.007853711,0.0029141381,0.004554952,0.0001972251,0.00018614491,0.0006323909,0.72183555,0.0016317915,0.26019415],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996636,0.000029398376,0.000020849531,0.000056995617,0.0001295327,0.00009965888],"domain_scores_gemma":[0.99872917,0.00012853074,0.0000847911,0.000085536194,0.00078519265,0.00018676872],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00037763378,0.0015537706,0.0009288848,0.0042843674,0.0009795639,0.0023991684,0.0013948692,0.0008041239,0.61360687],"category_scores_gemma":[0.002753563,0.0004951476,0.00077283755,0.008826576,0.00055109756,0.001363021,0.0013382279,0.0012459703,0.39409083],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004504768,0.000018965555,0.00084535003,0.0007074728,0.000012243529,0.000096162774,0.00011531645,0.00011772877,0.00016372728,0.00042637007,0.9732185,0.024233222],"study_design_scores_gemma":[0.000047868543,0.000008317988,0.008371424,0.00044444503,0.000013219936,0.000117936484,0.00028180925,0.00013829656,0.00019294041,0.00043570012,0.98992985,0.000018146044],"about_ca_topic_score_codex":0.27688918,"about_ca_topic_score_gemma":0.37405354,"teacher_disagreement_score":0.7231108,"about_ca_system_score_codex":0.0018563219,"about_ca_system_score_gemma":0.0047004553,"threshold_uncertainty_score":0.55114293},"labels":[],"label_agreement":null},{"id":"W6929009473","doi":"10.4224/18227302","title":"Developing optical tracking software to determine heading using MATLAB","year":2009,"lang":"en","type":"report","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Heading (navigation); Software; Tracking (education); MATLAB; Tracking system","score_opus":0.07319703873885909,"score_gpt":0.3256146292507471,"score_spread":0.252417590511888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929009473","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033709921,0.00010051195,0.9388951,0.000079994694,0.00010694279,0.00014103114,0.00041898977,0.04881598,0.008070473],"genre_scores_gemma":[0.048139434,0.00036176023,0.9229072,0.00013222756,0.00005450081,0.0006051403,0.0014330577,0.0073875985,0.018979039],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99918073,0.00007562572,0.00007565435,0.00015098906,0.00046595142,0.000051005998],"domain_scores_gemma":[0.99781775,0.00081295706,0.00017449727,0.00022243318,0.0009037432,0.00006863494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008372435,0.00091660925,0.00044381522,0.0011947175,0.0003670312,0.00095505605,0.001101484,0.00039843997,0.02236433],"category_scores_gemma":[0.0039962013,0.00055210514,0.00047610927,0.00051189354,0.00029560347,0.0009830508,0.0008520165,0.0009861529,0.01527604],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002489864,0.00014318283,0.0033288798,0.0005493849,0.00008791181,0.0004067665,0.00053546723,0.027365617,0.09651091,0.010412855,0.05274974,0.80766034],"study_design_scores_gemma":[0.00017919244,0.00031183005,0.004408212,0.00035768017,0.00008327566,0.0013274807,0.00019998466,0.32363853,0.3463963,0.007754717,0.31514865,0.00019415],"about_ca_topic_score_codex":0.0018267062,"about_ca_topic_score_gemma":0.002127454,"teacher_disagreement_score":0.02236433,"about_ca_system_score_codex":0.00046456495,"about_ca_system_score_gemma":0.00086001394,"threshold_uncertainty_score":0.07481611},"labels":[],"label_agreement":null},{"id":"W6929151221","doi":"10.4224/8895413","title":"CFD code evaluation","year":2004,"lang":"en","type":"report","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Code (set theory); Computational fluid dynamics; Software; Key (lock)","score_opus":0.04614007174363043,"score_gpt":0.31952547773513057,"score_spread":0.27338540599150013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929151221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41889322,0.0046338863,0.2835836,0.0050164503,0.00375384,0.0068827886,0.030776048,0.036936954,0.20952326],"genre_scores_gemma":[0.5621983,0.003446245,0.27718893,0.001735801,0.00035936153,0.0030965565,0.049070135,0.013771415,0.08913327],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9899554,0.0013048375,0.00050304766,0.0006078817,0.007217108,0.00041162645],"domain_scores_gemma":[0.96363616,0.0071272734,0.00043677955,0.002868687,0.025247656,0.0006834366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007942032,0.001326633,0.00074709754,0.0031623242,0.0017622312,0.0019002797,0.0019675489,0.0011280807,0.022185253],"category_scores_gemma":[0.040757276,0.00048172293,0.00088082696,0.0020762873,0.00060052006,0.0014150727,0.0019550137,0.0010088768,0.0068170945],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014265709,0.0018175952,0.014242894,0.0015983449,0.00017358633,0.0006424208,0.0016183459,0.030463783,0.045049198,0.0061083776,0.20118827,0.6956707],"study_design_scores_gemma":[0.0008422042,0.0013482689,0.02396504,0.00083221967,0.0002664364,0.0013160752,0.0012215798,0.10656975,0.22606261,0.0027803648,0.63439286,0.00040253683],"about_ca_topic_score_codex":0.010665766,"about_ca_topic_score_gemma":0.009925494,"teacher_disagreement_score":0.022185253,"about_ca_system_score_codex":0.0021473027,"about_ca_system_score_gemma":0.002982721,"threshold_uncertainty_score":0.07421708},"labels":[],"label_agreement":null},{"id":"W6929153191","doi":"10.48336/g3pd-j889","title":"3D modelling and inversion of airborne gravity gradiometry and aeromagnetic data from Budgell Harbour, North-Central Newfoundland","year":2022,"lang":"en","type":"article","venue":"Memorial University Research Repository (Memorial University)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Inversion (geology); Mineral exploration; Intrusion; Tectonics; Submarine pipeline; Parameterized complexity","score_opus":0.03237059401248935,"score_gpt":0.23358424786892515,"score_spread":0.2012136538564358,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929153191","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9492166,0.00029157227,0.020437911,0.0006013736,0.000054024713,0.00008536461,0.016226763,0.0015098201,0.011576585],"genre_scores_gemma":[0.96539515,0.00027151784,0.016750159,0.00006682123,0.000009725384,0.000055673103,0.011566568,0.000103702616,0.005780602],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9998288,0.000011611622,0.000008077095,0.000033612676,0.000062489205,0.000055322143],"domain_scores_gemma":[0.9997911,0.000035169138,0.00002474,0.000020381023,0.00010127769,0.000027302176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019350613,0.0004520178,0.00025062964,0.0008055676,0.00051982113,0.000881917,0.0005337676,0.00040410206,0.0020321666],"category_scores_gemma":[0.00041595584,0.0003211486,0.00045487407,0.0011597599,0.00044830277,0.00023906243,0.00045202015,0.00040906275,0.00061768026],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027280615,0.00023419844,0.2055134,0.00023027703,0.00018171231,0.00201421,0.0010194533,0.65737957,0.027081912,0.0013014395,0.017875299,0.08689575],"study_design_scores_gemma":[0.00006203154,0.00005687917,0.37100768,0.000053246345,0.000061152125,0.00020642897,0.0009103328,0.6090989,0.006083186,0.00034894457,0.011996978,0.000114169874],"about_ca_topic_score_codex":0.79161054,"about_ca_topic_score_gemma":0.88987154,"teacher_disagreement_score":0.20838946,"about_ca_system_score_codex":0.0024489253,"about_ca_system_score_gemma":0.0049094455,"threshold_uncertainty_score":0.41923338},"labels":[],"label_agreement":null},{"id":"W6929489723","doi":"10.5167/uzh-264617","title":"Large ischemic core defined by visually assessed ASPECTS predicts functional outcomes comparably accurate to automated CT perfusion in the 6–24 h window","year":2024,"lang":"en","type":"article","venue":"Zurich Open Repository and Archive (University of Zurich)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Receiver operating characteristic; Logistic regression; Perfusion scanning; Stroke (engine); Core (optical fiber); Occlusion; Modified Rankin Scale; Perfusion; Stroke recovery; Correlation; Area under the curve","score_opus":0.016016936728453283,"score_gpt":0.24721313657125843,"score_spread":0.23119619984280515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929489723","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974124,0.00040838358,0.0008323691,0.00006031211,0.000015491205,0.000011649453,0.0002967472,0.000033717297,0.0009290855],"genre_scores_gemma":[0.9993389,0.00005650363,0.00020860847,0.000015828884,0.000020764708,0.000004495598,0.00027168728,0.000003949526,0.00007926882],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99926883,0.00025247873,0.000060651142,0.00017301466,0.00014666867,0.00009843216],"domain_scores_gemma":[0.99550253,0.0017467886,0.001659006,0.00029986232,0.00043979392,0.00035192556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015417506,0.00048622873,0.00034934166,0.0010176266,0.00015058651,0.0009961781,0.00029991358,0.00048310752,0.0013655521],"category_scores_gemma":[0.0068033678,0.00019958407,0.0005996227,0.00050146313,0.00041441686,0.0005680291,0.00036254374,0.00026468036,0.00031426531],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005210419,0.000023825103,0.994722,0.000011957095,0.00009100162,0.000045578698,0.000019684552,0.0004382097,0.0004944383,0.00001935826,0.00014579536,0.0034670033],"study_design_scores_gemma":[0.000013613331,0.00019855083,0.9946464,0.00001226615,0.000073716816,0.000319641,0.000043702392,0.0041632075,0.0002735688,0.00009923032,0.0001473589,0.000008583037],"about_ca_topic_score_codex":0.0027868925,"about_ca_topic_score_gemma":0.003680818,"teacher_disagreement_score":0.0027868925,"about_ca_system_score_codex":0.00025816093,"about_ca_system_score_gemma":0.00030687964,"threshold_uncertainty_score":0.008153617},"labels":[],"label_agreement":null},{"id":"W6929515241","doi":"10.5061/dryad.s1rn8pk9q","title":"Data for: Occupancy–detection models with museum specimen data: Promise and pitfalls","year":2022,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of British Columbia","funders":"Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Nucleofection; TSG101; Proteogenomics; Gestational period; Hyporeflexia; Articular cartilage damage","score_opus":0.0733514902948496,"score_gpt":0.2652398723325154,"score_spread":0.19188838203766578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929515241","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034844417,0.00047612796,0.0040133167,0.0012709806,0.00015943476,0.000087162065,0.98795277,0.0010803891,0.0014754012],"genre_scores_gemma":[0.0070698233,0.0001516107,0.008650455,0.00033374006,0.000039599683,0.00035475928,0.9823982,0.0002227804,0.00077907497],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961111,0.0015233856,0.00054474757,0.0009233467,0.0006726619,0.00022467837],"domain_scores_gemma":[0.98706365,0.0054448918,0.0014230851,0.0042855334,0.0012872188,0.00049563963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007684545,0.0013981701,0.0014998706,0.0023508742,0.00089092506,0.0026460437,0.005202703,0.003021867,0.01944776],"category_scores_gemma":[0.033188537,0.001046303,0.0020277346,0.005626214,0.00076347747,0.002499627,0.002564797,0.0030579576,0.01903345],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042452503,0.0001469343,0.02078322,0.0019586082,0.0004602962,0.00016638057,0.00014124523,0.0070463447,0.0003769583,0.005334908,0.9435183,0.019642256],"study_design_scores_gemma":[0.0009367021,0.00006383925,0.032561522,0.0010361304,0.00012381631,0.00031766514,0.00030080148,0.009923232,0.00073270494,0.018716758,0.9351514,0.00013554849],"about_ca_topic_score_codex":0.025476452,"about_ca_topic_score_gemma":0.05662603,"teacher_disagreement_score":0.025476452,"about_ca_system_score_codex":0.0019539115,"about_ca_system_score_gemma":0.0018144593,"threshold_uncertainty_score":0.065059304},"labels":[],"label_agreement":null},{"id":"W6929538470","doi":"10.5061/dryad.4xgxd2560","title":"Data from: Interspecific hybrids show a reduced adaptive potential under DNA damaging conditions","year":2021,"lang":"en","type":"dataset","venue":"DRYAD","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de recherche du Québec – Nature et technologies; Fonds de Recherche du Québec - Santé","keywords":"Hybrid; Stimulus (psychology); Genome; Adaptation (eye); Yeast; Adaptive evolution; Interspecific hybridization","score_opus":0.043004745545544946,"score_gpt":0.28919733512119117,"score_spread":0.24619258957564621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929538470","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001115523,0.0006292766,0.00009134082,0.00012385396,0.00005035831,0.000007814117,0.996896,0.00018440287,0.0009013761],"genre_scores_gemma":[0.0044421838,0.000389942,0.00042712828,0.00016283768,0.000015322537,0.00007971672,0.99318707,0.00008397943,0.0012118345],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99864954,0.0002914858,0.00016300303,0.00048152736,0.00022828352,0.00018613649],"domain_scores_gemma":[0.99682885,0.0016522736,0.0004141107,0.0005560463,0.00035609893,0.00019259707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012651152,0.0014032405,0.0015405831,0.0022353192,0.0010115745,0.0025697434,0.0018245782,0.0019039668,0.050264467],"category_scores_gemma":[0.009381093,0.0003841939,0.001559071,0.0042154295,0.0004376866,0.0011641219,0.0016860797,0.001675909,0.03923242],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007448371,0.000090305155,0.02110073,0.008553236,0.00078291085,0.00018922951,0.00013351253,0.0010294488,0.0011035276,0.0010992478,0.95427674,0.010896284],"study_design_scores_gemma":[0.0005078422,0.0000636214,0.039350133,0.0011088644,0.0004199545,0.00030885107,0.00021738844,0.00039672543,0.0008589721,0.0016822236,0.9550268,0.000058772315],"about_ca_topic_score_codex":0.010303315,"about_ca_topic_score_gemma":0.023531476,"teacher_disagreement_score":0.050264467,"about_ca_system_score_codex":0.00069288665,"about_ca_system_score_gemma":0.0012508866,"threshold_uncertainty_score":0.16815138},"labels":[],"label_agreement":null},{"id":"W6929580762","doi":"10.5066/f7jq107b","title":"iTOUGH2-EOS7C model used to analyze multiphase flow and underpressured shale at the Bruce Nuclear Site, Ontario, Canada","year":2017,"lang":"en","type":"dataset","venue":"USGS DOI Tool Production Environment","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Paleozoic; Aquifer; Methane; Oil shale; Multiphase flow; Flow (mathematics); Structural basin","score_opus":0.011334396972755467,"score_gpt":0.21351204046385544,"score_spread":0.20217764349109998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929580762","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88502127,0.0003394192,0.02366664,0.0007484252,0.00012697208,0.0004098774,0.019183649,0.0015679013,0.0689359],"genre_scores_gemma":[0.9712038,0.00020335364,0.011734733,0.000114398215,0.000018960945,0.00023649285,0.0067396546,0.0001679053,0.0095807435],"study_design_codex":"simulation_or_modeling","study_design_gemma":"not_applicable","domain_scores_codex":[0.99987054,0.000013651412,0.0000061693554,0.000025915167,0.000035608184,0.000048091337],"domain_scores_gemma":[0.9996915,0.00006999933,0.000022668852,0.000016019712,0.00014758369,0.000052367865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022318578,0.0008057741,0.00051417574,0.0006758036,0.0012041752,0.001069889,0.0022549264,0.0016792679,0.007928001],"category_scores_gemma":[0.0007944677,0.0005582654,0.00083749206,0.00073057297,0.0007390086,0.0003352373,0.00063769065,0.0006615779,0.0006087834],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000805449,0.00005770861,0.009438158,0.000044508743,0.000025510735,0.000121118916,0.000053272426,0.98385644,0.0012190744,0.0016651128,0.0016029247,0.0018355139],"study_design_scores_gemma":[0.00005018232,0.000009934834,0.0024408144,0.000006936241,0.000008043671,0.000009347825,0.00004383868,0.995774,0.00015798317,0.00018064007,0.0013075082,0.000010913425],"about_ca_topic_score_codex":0.8327537,"about_ca_topic_score_gemma":0.7964036,"teacher_disagreement_score":0.16724628,"about_ca_system_score_codex":0.006912746,"about_ca_system_score_gemma":0.008941017,"threshold_uncertainty_score":0.33646244},"labels":[],"label_agreement":null},{"id":"W6929581921","doi":"10.5121/ijmvsc.2025.16201","title":"THE NATURE OF THE RISK: PERCEPTIONS ACROSS G7 COUNTRIES REGARDING RISKS FROM INFORMATION TECHNOLOGY VERSUS THOSEARISING FROM CLIMATE CHANGE, 2022-2025","year":2025,"lang":"en","type":"article","venue":"International Journal of Managing Value and Supply Chains","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Climate change; Perception; Information technology; Risk perception; Natural (archaeology); Process (computing); Risk management","score_opus":0.01041760810344217,"score_gpt":0.29608370238043397,"score_spread":0.2856660942769918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929581921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99752194,0.00016165193,0.00008183024,0.0002711473,0.0000056008616,0.000004857897,0.000071587114,9.609031e-7,0.0018804218],"genre_scores_gemma":[0.99948394,0.00015520396,0.00004946119,0.00005727315,0.0000022098136,0.0000035001544,0.00007615922,7.05462e-7,0.00017141251],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99908006,0.0003075505,0.000079985715,0.00006489602,0.00021047216,0.0002570205],"domain_scores_gemma":[0.9958454,0.0009925045,0.0018219462,0.00014024916,0.00063922786,0.0005606656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017494645,0.0002204495,0.00019472622,0.0011908351,0.000975605,0.0027024099,0.00025025022,0.0006054842,0.0012769774],"category_scores_gemma":[0.004098512,0.00012041575,0.0003346271,0.0015553071,0.0019692774,0.0017974011,0.002289367,0.00095588126,0.00016281649],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016902447,0.000044818342,0.9229076,0.00006684776,0.00006947118,0.00038450898,0.05867968,0.00048549482,0.0006445898,0.0022062887,0.00079279125,0.01354884],"study_design_scores_gemma":[0.0000033927263,0.00014565504,0.73009,0.00009515594,0.000018004419,0.00016778005,0.264442,0.00029692947,0.00026706263,0.0005247709,0.003914272,0.000034979184],"about_ca_topic_score_codex":0.029175144,"about_ca_topic_score_gemma":0.030200807,"teacher_disagreement_score":0.029175144,"about_ca_system_score_codex":0.0015809097,"about_ca_system_score_gemma":0.0012522127,"threshold_uncertainty_score":0.058010638},"labels":[],"label_agreement":null},{"id":"W6929639321","doi":"10.5061/dryad.7sqv9s4pk","title":"Contrasting the suitability of shade coffee agriculture and native forest as overwinter habitat for Canada Warbler (Cardellina canadensis) in the Colombian Andes.","year":2020,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Environment and Climate Change Canada; University of Saskatchewan","funders":"","keywords":"Exclosure; Vegetation (pathology); Population; Rainforest; Overgrazing","score_opus":0.0162416024055917,"score_gpt":0.21800604999126758,"score_spread":0.20176444758567588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929639321","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99898213,0.00015082366,0.000032498294,0.000023585475,0.0000036197898,0.000004442984,0.00019763099,0.0000020454288,0.0006032552],"genre_scores_gemma":[0.99938345,0.00006153558,0.00008031787,0.000013232765,0.0000016022117,0.0000033152028,0.00021857762,0.0000016285577,0.00023632818],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998745,0.0000143870775,0.00000393004,0.000044157325,0.000015914491,0.000047013706],"domain_scores_gemma":[0.9996923,0.0000312681,0.0001019174,0.000012263824,0.000055764278,0.00010646976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014271885,0.00020782402,0.00013284519,0.00051502266,0.00049258035,0.0004837398,0.00020714922,0.00015348378,0.0010688107],"category_scores_gemma":[0.00048141056,0.00008897786,0.00011372717,0.00029080862,0.00040537838,0.00021726769,0.0003319884,0.00020222062,0.000098984565],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023398439,0.000059164806,0.98593223,0.000054545628,0.000040480863,0.00013527133,0.0016105693,0.00016631965,0.00470801,0.00011430174,0.0004316559,0.006513469],"study_design_scores_gemma":[0.0000012332256,0.0000122487245,0.9987777,0.000003974217,0.0000056081267,0.0000228331,0.00078704295,0.000093263894,0.00004598556,0.00000916136,0.00023767306,0.0000033129688],"about_ca_topic_score_codex":0.41516474,"about_ca_topic_score_gemma":0.8200649,"teacher_disagreement_score":0.5848353,"about_ca_system_score_codex":0.0016795932,"about_ca_system_score_gemma":0.0006403853,"threshold_uncertainty_score":0.82549644},"labels":[],"label_agreement":null},{"id":"W6929676590","doi":"10.48550/arxiv.astro-ph/0401134","title":"An RXTE Archival Search for Coherent X-ray Pulsations in LMXB 4U 1820-30","year":2004,"lang":"en","type":"preprint","venue":"arXiv (Cornell University)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Binary number; Globular cluster; X-ray binary; Millisecond; Millisecond pulsar; Amplitude; Low Mass; Phase (matter)","score_opus":0.06437509782320835,"score_gpt":0.22147847008281224,"score_spread":0.15710337225960389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929676590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801457,0.00008926933,0.00043124892,0.000021717038,0.000002069224,0.000016218624,0.00055032654,0.000027639953,0.0008470058],"genre_scores_gemma":[0.9836039,0.00016258308,0.006450099,0.00007452083,0.000028731874,0.00005199208,0.0076802797,0.00003266608,0.0019152766],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997712,0.00003511274,0.000015959384,0.0000642305,0.00006109875,0.00005235566],"domain_scores_gemma":[0.99952507,0.00005745484,0.00016171462,0.00009150592,0.000056019893,0.00010828466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049589435,0.00026926547,0.00039263366,0.0015754924,0.00061014696,0.00069145916,0.00032177413,0.00040527366,0.0011266093],"category_scores_gemma":[0.00070326804,0.0002601373,0.00021777148,0.0013128732,0.00021441639,0.00028815004,0.00083109445,0.00029158153,0.00048284396],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009855349,0.00047643494,0.7369159,0.00014838298,0.00022390937,0.0014146165,0.0008754781,0.0018823216,0.21318455,0.00077494036,0.0022700788,0.0408479],"study_design_scores_gemma":[0.0000644621,0.00021312632,0.9824126,0.000010568094,0.00007667924,0.0006066489,0.00022831536,0.0021399483,0.009861399,0.00019180863,0.0041803885,0.000013989879],"about_ca_topic_score_codex":0.001817738,"about_ca_topic_score_gemma":0.0074412334,"teacher_disagreement_score":0.001817738,"about_ca_system_score_codex":0.00025637037,"about_ca_system_score_gemma":0.0003247057,"threshold_uncertainty_score":0.003768921},"labels":[],"label_agreement":null},{"id":"W6929684589","doi":"10.5061/dryad.bg79cnp9v","title":"Mitochondrial DNA assay of 63 Chinook-Coho salmon hybrids","year":2021,"lang":"en","type":"dataset","venue":"Open MIND","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada","funders":"","keywords":"Mitochondrial DNA; Hybrid; Offspring; Polymerase chain reaction; DNA; Gene","score_opus":0.019351696923781924,"score_gpt":0.28217000441853246,"score_spread":0.26281830749475055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929684589","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0060009332,0.00046033086,0.00016126588,0.00010222334,0.000024272531,0.000025128285,0.99227774,0.000078785175,0.0008693783],"genre_scores_gemma":[0.009954422,0.00025972648,0.0005617046,0.00009030222,0.000011755719,0.0001954511,0.98775315,0.000030352174,0.0011431945],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992605,0.00013289327,0.00012431252,0.0002775654,0.00009802319,0.00010661343],"domain_scores_gemma":[0.9982937,0.0006339022,0.0002859541,0.0002846633,0.00037846834,0.00012331677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012695707,0.00088508904,0.0010615425,0.0013998876,0.0006991872,0.0010808175,0.00097634067,0.0009950072,0.014991613],"category_scores_gemma":[0.0051985313,0.0003220488,0.0008074024,0.002743503,0.00024321594,0.00040825343,0.0010888075,0.00085406675,0.009226022],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022597432,0.00018624915,0.17877665,0.0094668735,0.0011324622,0.00049974176,0.00039361173,0.0015793862,0.0036273492,0.0011393422,0.7517903,0.049148414],"study_design_scores_gemma":[0.0010583433,0.00020102214,0.302683,0.001452447,0.00090020755,0.0005171407,0.0006828452,0.00096684427,0.0023402898,0.0019252959,0.68717915,0.00009340635],"about_ca_topic_score_codex":0.021294054,"about_ca_topic_score_gemma":0.034108885,"teacher_disagreement_score":0.021294054,"about_ca_system_score_codex":0.0005923104,"about_ca_system_score_gemma":0.0011881347,"threshold_uncertainty_score":0.050151944},"labels":[],"label_agreement":null},{"id":"W6929700771","doi":"10.5061/dryad.q28b2","title":"Data from: Are flies kind to kin? The role of intra- and inter-sexual relatedness in mediating reproductive conflict","year":2015,"lang":"en","type":"dataset","venue":"Data Archiving and Networked Services (DANS)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Sexual conflict; Kinship; Courtship; Context (archaeology); Kin selection; Inclusive fitness; Kin recognition; Set (abstract data type)","score_opus":0.031196914260139017,"score_gpt":0.275066379742481,"score_spread":0.24386946548234198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929700771","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008054018,0.00025372946,0.000083411294,0.00011727504,0.000027484648,0.00001687887,0.9978581,0.00027506036,0.00056272617],"genre_scores_gemma":[0.0026094897,0.00023618802,0.00047975287,0.00008301803,0.000009932485,0.000111535825,0.9959335,0.0000593031,0.00047724397],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991258,0.00013661833,0.00018428556,0.0002455788,0.00017333505,0.00013447179],"domain_scores_gemma":[0.99785715,0.000830737,0.000379744,0.0003659739,0.00032866295,0.00023772634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012887402,0.0016357657,0.0014713956,0.0024649692,0.00061993144,0.0019858086,0.0021553535,0.0019893195,0.028849857],"category_scores_gemma":[0.007962364,0.00042595604,0.0012329539,0.0032696163,0.00046846716,0.0010340775,0.0015914964,0.0013207688,0.02117931],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006265689,0.000075621065,0.017532954,0.008901519,0.00037426737,0.00025723927,0.00020937272,0.0012613161,0.0010101448,0.0013669942,0.95849794,0.009886178],"study_design_scores_gemma":[0.0007271056,0.000051168143,0.036447745,0.0012648149,0.00019209908,0.00026655235,0.00019255321,0.0008786666,0.0010755392,0.0020750284,0.9567569,0.00007185362],"about_ca_topic_score_codex":0.016043488,"about_ca_topic_score_gemma":0.028862799,"teacher_disagreement_score":0.028849857,"about_ca_system_score_codex":0.0012776904,"about_ca_system_score_gemma":0.002272867,"threshold_uncertainty_score":0.09651244},"labels":[],"label_agreement":null},{"id":"W6929767758","doi":"10.5061/dryad.9s6f82f","title":"Data from: Systematic deviations from linear size spectra of lake fish communities are correlated with predator-prey interactions and lake-use intensity","year":2018,"lang":"en","type":"dataset","venue":"Data Archiving and Networked Services (DANS)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Abundance (ecology); Logarithm; Sample size determination; Range (aeronautics); Fishing; Linearity; Community structure; Linear regression; Fish <Actinopterygii>","score_opus":0.030414919230311283,"score_gpt":0.25088900104761336,"score_spread":0.22047408181730208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929767758","genre_codex":"empirical","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86554193,0.00025120177,0.0029248986,0.0005714336,0.00012113786,0.00017183617,0.12009984,0.00064731285,0.009670409],"genre_scores_gemma":[0.9102923,0.00018930115,0.0024156484,0.0002494033,0.00003099997,0.0005651914,0.07801341,0.00016277606,0.008080898],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9992725,0.00011829083,0.00013042516,0.00019562506,0.00020479367,0.000078387275],"domain_scores_gemma":[0.99666816,0.0010081967,0.00089759164,0.0006307879,0.00062622386,0.00016899878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007926656,0.00037567722,0.00034842035,0.0009615619,0.00030029123,0.00055350014,0.00040545434,0.00048360883,0.019321721],"category_scores_gemma":[0.0041432832,0.00016614742,0.00033979723,0.0012051245,0.00043396914,0.0005065507,0.00077971217,0.00045494692,0.0057657463],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002670074,0.00031958646,0.8644057,0.00081539905,0.0006059566,0.00022819314,0.0011191125,0.002337636,0.01563783,0.0006687684,0.04725507,0.063936725],"study_design_scores_gemma":[0.00004517491,0.00011106686,0.98541707,0.00003275846,0.000049462953,0.00007044606,0.00016720865,0.0010143695,0.0014638571,0.00015767895,0.011448874,0.000022200411],"about_ca_topic_score_codex":0.0050622,"about_ca_topic_score_gemma":0.008066897,"teacher_disagreement_score":0.019321721,"about_ca_system_score_codex":0.00034460804,"about_ca_system_score_gemma":0.00035262783,"threshold_uncertainty_score":0.06463754},"labels":[],"label_agreement":null},{"id":"W6929774383","doi":"10.5167/uzh-126444","title":"Nontarget effects of ivermectin residues on earthworms and springtails dwelling beneath dung of treated cattle in four countries","year":2016,"lang":"en","type":"article","venue":"Zurich Open Repository and Archive (University of Zurich)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Ivermectin; Earthworm; Invertebrate; Oligochaeta (plant); Livestock","score_opus":0.005141933184763749,"score_gpt":0.18018500022701445,"score_spread":0.1750430670422507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929774383","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995981,0.00012821486,0.000023755372,0.0000046898554,0.0000014422501,0.000005011836,0.00007183318,0.0000011750474,0.00016583725],"genre_scores_gemma":[0.9986651,0.0002369036,0.00020238679,0.000027513408,0.0000021538824,0.0000071131726,0.00024888304,0.0000011828613,0.0006086474],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99972326,0.00007196754,0.000022236829,0.00007599663,0.000046260702,0.00006028512],"domain_scores_gemma":[0.9996006,0.000099399454,0.00013543798,0.000014801191,0.00008154798,0.000068257905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002845147,0.00033956472,0.0004553326,0.0005175279,0.0003927042,0.00048777222,0.00027159706,0.00028609615,0.0006534729],"category_scores_gemma":[0.00033192607,0.00022845832,0.0002708102,0.00040355194,0.00035603144,0.0001742859,0.00020695181,0.00022037489,0.00007497603],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0056610852,0.00089508743,0.6492714,0.00052817335,0.0002732923,0.0007174541,0.0016259794,0.00049014646,0.31770676,0.000046794255,0.00020421628,0.02257954],"study_design_scores_gemma":[0.000022774355,0.0043306653,0.9779128,0.00001838304,0.00008944217,0.0001404254,0.0010036263,0.00018075295,0.015775464,0.000009840144,0.00050780247,0.00000804918],"about_ca_topic_score_codex":0.0152716795,"about_ca_topic_score_gemma":0.04386318,"teacher_disagreement_score":0.0152716795,"about_ca_system_score_codex":0.0006280066,"about_ca_system_score_gemma":0.0002540757,"threshold_uncertainty_score":0.030365586},"labels":[],"label_agreement":null},{"id":"W6929778349","doi":"10.48620/87969","title":"AI-Enhanced Speech Recognition in Triage.","year":2025,"lang":"en","type":"article","venue":"Open Access CRIS of the University of Bern","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Triage; Documentation; Consistency (knowledge bases); German; Process (computing); Workaround","score_opus":0.025397938414580736,"score_gpt":0.30644884036465236,"score_spread":0.28105090195007165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929778349","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19819042,0.0036891229,0.7525316,0.0015122842,0.0017085656,0.0007365618,0.003499623,0.02681897,0.011312802],"genre_scores_gemma":[0.6636431,0.0012959874,0.318644,0.001290461,0.00038919598,0.0007558703,0.004514957,0.00050178915,0.00896451],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99899226,0.00034996308,0.00007220657,0.00023502311,0.00027367356,0.0000769496],"domain_scores_gemma":[0.9982374,0.0009871701,0.00011739515,0.00010669234,0.0004797016,0.00007159236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001222397,0.0010131573,0.00044573584,0.0006909661,0.00019794134,0.001026816,0.0006459853,0.000966361,0.0035521244],"category_scores_gemma":[0.0048420536,0.00017411033,0.0005134142,0.0003669576,0.00022908149,0.00083569443,0.0008521147,0.0006699303,0.004907573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018564616,0.00035541956,0.0050155525,0.0012759488,0.00023016016,0.0006608632,0.0005395552,0.018735005,0.23572251,0.0013050191,0.014950628,0.7193529],"study_design_scores_gemma":[0.0001862169,0.0017144239,0.016158609,0.00023735785,0.00033078654,0.002363742,0.00049440196,0.6745907,0.26273635,0.0059782686,0.034957938,0.00025122808],"about_ca_topic_score_codex":0.0015318459,"about_ca_topic_score_gemma":0.0012468114,"teacher_disagreement_score":0.0035521244,"about_ca_system_score_codex":0.00032215076,"about_ca_system_score_gemma":0.00056797254,"threshold_uncertainty_score":0.01188308},"labels":[],"label_agreement":null},{"id":"W6929803982","doi":"10.5167/uzh-48939","title":"Role of the environment in the development of canine atopic dermatitis in Labrador and Golden Retrievers","year":2011,"lang":"en","type":"article","venue":"Zurich Open Repository and Archive (University of Zurich)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Atopic dermatitis; Disease; Logistic regression; Risk factor; Epidemiology; Multivariate analysis","score_opus":0.008034059400411622,"score_gpt":0.16452828986393317,"score_spread":0.15649423046352154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929803982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99968827,0.0001349258,0.0000149637,0.000007318322,5.5445076e-7,7.1348813e-7,0.000017302036,5.3481233e-7,0.00013540492],"genre_scores_gemma":[0.99979,0.000060741895,0.000034939334,0.000005023614,0.0000018968044,8.5849695e-7,0.00003572606,9.0064486e-7,0.000069786],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996295,0.00015281781,0.000024444693,0.00007750201,0.000051670366,0.00006395919],"domain_scores_gemma":[0.9993636,0.000110990775,0.00032626264,0.00003719619,0.000042471725,0.00011937305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003217502,0.00017187052,0.00023993151,0.0006332778,0.00023095595,0.0005553198,0.00014934388,0.00025191903,0.00092181476],"category_scores_gemma":[0.0008128436,0.000116797884,0.00025663254,0.00036693062,0.00031497382,0.00025302847,0.00028824512,0.00020878275,0.00012470996],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004175217,0.00006908231,0.9933008,0.000009526909,0.000041626314,0.00028308784,0.00018990615,0.00004451938,0.0038762826,0.000035196874,0.00002222805,0.0017100978],"study_design_scores_gemma":[0.0000011884608,0.0001000313,0.999374,0.0000020709458,0.000010363749,0.00021520059,0.00011505431,0.000035443125,0.00009494494,0.0000086705995,0.000041663556,0.0000013901857],"about_ca_topic_score_codex":0.002888316,"about_ca_topic_score_gemma":0.0046607098,"teacher_disagreement_score":0.002888316,"about_ca_system_score_codex":0.00024415832,"about_ca_system_score_gemma":0.00015330344,"threshold_uncertainty_score":0.0057430267},"labels":[],"label_agreement":null},{"id":"W6929839992","doi":"10.5281/zenodo.10002201","title":"Simulation-Based Inference for the Synchronization of Business Cycles","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Synchronization (alternating current); Inference; Business cycle; Scheme (mathematics)","score_opus":0.03663699267674085,"score_gpt":0.2708478506202792,"score_spread":0.23421085794353835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929839992","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06467018,0.00078792294,0.9297599,0.0008493454,0.00013765683,0.000088876484,0.000614599,0.0010279588,0.0020636523],"genre_scores_gemma":[0.88661784,0.0004961624,0.10780013,0.00020872756,0.00020351456,0.00029545327,0.0014557928,0.00024834456,0.0026740262],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99746394,0.0014056711,0.00013134265,0.0005259293,0.00023826398,0.00023472779],"domain_scores_gemma":[0.9213757,0.073560596,0.0014155174,0.0016557144,0.0011444335,0.0008480827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0077580367,0.0010855058,0.0034457778,0.002445775,0.0011827558,0.0021112594,0.003043215,0.0027602646,0.0067869807],"category_scores_gemma":[0.05134054,0.002048632,0.002310128,0.0017976759,0.0021105271,0.002443553,0.002132772,0.0037249317,0.0006271701],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012356686,0.00003495039,0.0010169846,0.00003780538,0.000073869,0.000028932674,0.000029354907,0.9773985,0.0000952753,0.015833711,0.00032239922,0.005004671],"study_design_scores_gemma":[0.000014143816,0.0000037843033,0.000064580054,0.000003923654,0.000005415881,0.0000027804142,0.0000020618547,0.9917176,0.00003739222,0.008079647,0.00006565437,0.000002904062],"about_ca_topic_score_codex":0.027500194,"about_ca_topic_score_gemma":0.019320067,"teacher_disagreement_score":0.027500194,"about_ca_system_score_codex":0.0023641787,"about_ca_system_score_gemma":0.0034245441,"threshold_uncertainty_score":0.05468023},"labels":[],"label_agreement":null},{"id":"W6929902417","doi":"10.5281/zenodo.11610782","title":"FIGURE 8. Hymetrochota austini n in Fourteen new species of demosponges (Porifera) from three coastal fjords in southern British Columbia, Canada","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Precision Nanosystems (Canada)","funders":"","keywords":"Holotype; Fjord; Paratype; Section (typography); Skeleton (computer programming)","score_opus":0.01602696742356841,"score_gpt":0.19891543180246546,"score_spread":0.18288846437889705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929902417","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9673423,0.0007316698,0.0004522872,0.000069853675,0.00002551261,0.00008694641,0.002927335,0.000045480974,0.0283186],"genre_scores_gemma":[0.98789316,0.00035425715,0.0009841894,0.00005586095,0.000006583959,0.00004521575,0.0016664551,0.000016588605,0.008977668],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.999765,0.000008137271,0.000009128986,0.00008164778,0.000064006796,0.000072018935],"domain_scores_gemma":[0.9996675,0.000029557692,0.00007293941,0.000019690475,0.00012328525,0.00008692022],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001374693,0.00038150515,0.00030450005,0.0023724684,0.003528656,0.0008584592,0.00044423703,0.00036933424,0.0049794125],"category_scores_gemma":[0.00024108563,0.00037512358,0.00018660704,0.0023471275,0.0011043982,0.00020684036,0.0008779027,0.00044157312,0.00083150883],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00062431727,0.00004809702,0.8340235,0.00038027397,0.00008424449,0.0015447602,0.012125847,0.00020834553,0.052223615,0.00023202758,0.0031804412,0.09532457],"study_design_scores_gemma":[0.0000022315835,0.0000116060055,0.9917157,0.000024220315,0.000013346512,0.0003255356,0.0027668728,0.00002553985,0.00032370535,0.000013377657,0.004772719,0.0000050517638],"about_ca_topic_score_codex":0.64836127,"about_ca_topic_score_gemma":0.94477147,"teacher_disagreement_score":0.35163873,"about_ca_system_score_codex":0.0032517323,"about_ca_system_score_gemma":0.0012299019,"threshold_uncertainty_score":0.70741916},"labels":[],"label_agreement":null},{"id":"W6929938617","doi":"10.5281/zenodo.11907172","title":"country number codes list pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Phone; Telephone number; Cape verde; Random digit dialing; Table (database); Code (set theory); Census","score_opus":0.01442349191896232,"score_gpt":0.2379077186175481,"score_spread":0.22348422669858575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929938617","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019733387,0.00039823417,0.0011132656,0.0009282142,0.0028923827,0.0003192097,0.015433633,0.0038330017,0.9748848],"genre_scores_gemma":[0.0006617069,0.00032693156,0.00042388073,0.00038405744,0.00028531006,0.00010681247,0.0050332616,0.001668473,0.9911096],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989329,0.000093915354,0.00007063088,0.00019928046,0.00055681623,0.00014646702],"domain_scores_gemma":[0.9942372,0.00058778556,0.00016669703,0.00056077266,0.00349425,0.000953339],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010991817,0.0014398298,0.0015741948,0.0026136842,0.0027352597,0.0066276127,0.002184752,0.0022767044,0.9538566],"category_scores_gemma":[0.007537344,0.00083113293,0.0009977273,0.0030343093,0.000715812,0.0066010472,0.0029685292,0.00244242,0.9500414],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001651539,0.00001345599,0.00003101347,0.000099748075,7.5590066e-7,0.000014737205,0.000016164135,0.000021897915,0.00014020153,0.00096509233,0.9825017,0.016178649],"study_design_scores_gemma":[0.0000071379027,0.000011497003,0.00010926616,0.0000525139,0.0000011468514,0.00002588462,0.00003237266,0.000019961037,0.00012718217,0.00029545085,0.9993112,0.000006349339],"about_ca_topic_score_codex":0.005204433,"about_ca_topic_score_gemma":0.0065445676,"teacher_disagreement_score":0.046143413,"about_ca_system_score_codex":0.0014844184,"about_ca_system_score_gemma":0.00220802,"threshold_uncertainty_score":0.06581789},"labels":[],"label_agreement":null},{"id":"W6929956614","doi":"10.5255/ukda-sn-4291-1","title":"Labour Force Survey Five-Quarter Longitudinal Dataset, March 1996 - May 1997","year":2004,"lang":"en","type":"dataset","venue":"UK Data Archive","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); Sample (material); Unemployment; Survey data collection; Work (physics); Data collection; Longitudinal study; Longitudinal data","score_opus":0.031819995179950857,"score_gpt":0.29426171213875574,"score_spread":0.26244171695880486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929956614","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00091394153,0.0001548515,0.00008039099,0.00018883141,0.000059429887,0.000120140896,0.9964469,0.000054685086,0.0019808772],"genre_scores_gemma":[0.0041138777,0.000386447,0.00026979085,0.00020910981,0.00004482872,0.0013019523,0.98389155,0.00003992918,0.009742573],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9983589,0.00026658466,0.0002948306,0.0003085037,0.00051611237,0.00025507624],"domain_scores_gemma":[0.99605846,0.00037807444,0.0005644012,0.00032176593,0.0024488736,0.0002284684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022902372,0.0011095918,0.0013535364,0.0025992736,0.00086427294,0.0015838501,0.0021024162,0.0010830985,0.058468938],"category_scores_gemma":[0.010295422,0.00075858075,0.00058140326,0.007205997,0.0001902371,0.0010217057,0.0011039954,0.0013979212,0.055790097],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015266938,0.000035414716,0.00647665,0.00035862872,0.00003838827,0.000029996687,0.00008485071,0.00016532783,0.000020817368,0.0003691572,0.98597485,0.006293128],"study_design_scores_gemma":[0.001005043,0.00013069194,0.1829903,0.00085776596,0.00012778846,0.00009867742,0.0009063479,0.00047686012,0.00013361753,0.0006578542,0.8125629,0.000052253825],"about_ca_topic_score_codex":0.16943632,"about_ca_topic_score_gemma":0.18505426,"teacher_disagreement_score":0.16943632,"about_ca_system_score_codex":0.0027054173,"about_ca_system_score_gemma":0.0047883587,"threshold_uncertainty_score":0.33690023},"labels":[],"label_agreement":null},{"id":"W6930016787","doi":"10.5281/zenodo.10614389","title":"LENS: A LEO Satellite Network Measurement Dataset - 202312 - Part 4","year":2024,"lang":"en","type":"dataset","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Satellite; Field (mathematics); Data collection; Data processing; Measure (data warehouse)","score_opus":0.05586195443001227,"score_gpt":0.24982748859508647,"score_spread":0.1939655341650742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930016787","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031232522,0.000093999726,0.00018912544,0.00007934284,0.00003632105,0.000014409703,0.9976387,0.0009194828,0.0007163528],"genre_scores_gemma":[0.00050709804,0.000033798235,0.00029107003,0.000038847324,0.000009310936,0.000038306196,0.99849737,0.00009738111,0.00048686168],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99894196,0.00018901056,0.000113274415,0.00030704995,0.0002802609,0.00016854818],"domain_scores_gemma":[0.99864227,0.00024096452,0.000115786184,0.00039278294,0.0004804113,0.00012780771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009189047,0.0026362624,0.0013923985,0.0025559731,0.0007628349,0.0018330624,0.002769929,0.0022688652,0.038907487],"category_scores_gemma":[0.003961427,0.00057311193,0.0015214137,0.00471924,0.00040348925,0.0014527397,0.0017935383,0.0016865426,0.07851942],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006117542,0.000025580679,0.0009281848,0.0003265402,0.000046688107,0.000023380182,0.000012808582,0.0006880897,0.00020893391,0.00041478107,0.99456376,0.0027000243],"study_design_scores_gemma":[0.00027398602,0.000033919092,0.008632048,0.00018869001,0.000055129785,0.000107536725,0.00009018106,0.0025764857,0.00086423644,0.0025795712,0.98453414,0.00006409418],"about_ca_topic_score_codex":0.030445425,"about_ca_topic_score_gemma":0.04925208,"teacher_disagreement_score":0.038907487,"about_ca_system_score_codex":0.0015258837,"about_ca_system_score_gemma":0.0017496513,"threshold_uncertainty_score":0.13015854},"labels":[],"label_agreement":null},{"id":"W6930181184","doi":"10.5281/zenodo.11714650","title":"les 10 rôles du manager pdf","year":2024,"lang":"fr","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nucleofection; Paraphernalia; Work (physics); TSG101","score_opus":0.019837966945847465,"score_gpt":0.22767470348293514,"score_spread":0.20783673653708767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930181184","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026532603,0.00027825372,0.000620828,0.0014678058,0.0020391443,0.00013082236,0.0020017587,0.0038020066,0.9893939],"genre_scores_gemma":[0.0014972393,0.00019639957,0.000288836,0.00056775764,0.0004593967,0.00007182514,0.00066546194,0.0014189217,0.99483407],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99879223,0.00019634652,0.000043734144,0.00015340808,0.000581988,0.00023233044],"domain_scores_gemma":[0.9964057,0.00038212084,0.00012902416,0.00030067327,0.0011151973,0.0016672615],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001097193,0.001146273,0.0007490006,0.0013978247,0.0022705938,0.008068984,0.0011958901,0.0017078122,0.9174206],"category_scores_gemma":[0.0051307,0.0006769587,0.0006261542,0.0013824123,0.0004448326,0.006541704,0.0037612822,0.0020375727,0.8701599],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023857712,0.000019191173,0.00005110082,0.000035934547,6.4549386e-7,0.000025545258,0.000059691425,0.000010343535,0.00009469497,0.0016535955,0.9807519,0.017273465],"study_design_scores_gemma":[0.000004869051,0.000005391645,0.00007839454,0.000011997167,3.711836e-7,0.000014276897,0.000051791718,0.000009162755,0.000045841527,0.000113127826,0.9996617,0.0000029405312],"about_ca_topic_score_codex":0.0038310222,"about_ca_topic_score_gemma":0.009451947,"teacher_disagreement_score":0.082579374,"about_ca_system_score_codex":0.0018727427,"about_ca_system_score_gemma":0.0019584864,"threshold_uncertainty_score":0.11778939},"labels":[],"label_agreement":null},{"id":"W6930201100","doi":"10.5281/zenodo.11943556","title":"us elle kennedy pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Paraphernalia; Limiting; Filter (signal processing); Pretext; Gloom","score_opus":0.015905694797444154,"score_gpt":0.22490405155595325,"score_spread":0.20899835675850909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930201100","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028051325,0.00077088206,0.0007303951,0.0012936743,0.002101697,0.00010534347,0.0027376146,0.0040271385,0.98795277],"genre_scores_gemma":[0.00074148533,0.0004191013,0.00028967243,0.00043398148,0.00023350894,0.0000238123,0.0008001675,0.0010182408,0.99603987],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99943167,0.000038277627,0.000023855226,0.000083648854,0.00034339784,0.000079237936],"domain_scores_gemma":[0.99829906,0.00018387809,0.000053425967,0.0002138425,0.0008319915,0.000417801],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00056818774,0.0012170954,0.0008925399,0.00201351,0.0018921366,0.0074016936,0.001223891,0.0020622087,0.9140427],"category_scores_gemma":[0.0031569235,0.00059739745,0.00079409446,0.0014528421,0.0005735546,0.006070639,0.0029268542,0.0021667401,0.8868403],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018557157,0.000016601849,0.00002911421,0.00006779561,0.0000012038595,0.000037635862,0.000028519577,0.000018155448,0.00017806336,0.0012181108,0.9675712,0.030815102],"study_design_scores_gemma":[0.000003659806,0.000006132009,0.0001064716,0.00003172121,9.0490965e-7,0.000045855133,0.000030852312,0.000012689543,0.00010661781,0.00021913974,0.99943215,0.0000037036598],"about_ca_topic_score_codex":0.0040123886,"about_ca_topic_score_gemma":0.009348406,"teacher_disagreement_score":0.08595729,"about_ca_system_score_codex":0.0013955322,"about_ca_system_score_gemma":0.0011785155,"threshold_uncertainty_score":0.12260759},"labels":[],"label_agreement":null},{"id":"W6930204124","doi":"10.5281/zenodo.11711340","title":"Checkliste neurologie pdf","year":2024,"lang":"de","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Spinal cord injury; License; Test (biology)","score_opus":0.02398714791262571,"score_gpt":0.23903505749792825,"score_spread":0.21504790958530254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930204124","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029499887,0.019623678,0.012352568,0.034548398,0.010423115,0.018054942,0.23985969,0.011302306,0.65088534],"genre_scores_gemma":[0.02183779,0.03357639,0.034568634,0.031413004,0.006430795,0.03911785,0.2306637,0.006482265,0.59590966],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99352854,0.0018251515,0.0019535974,0.00040873582,0.0019612398,0.00032270083],"domain_scores_gemma":[0.96407837,0.010825497,0.001974414,0.0018113146,0.019474842,0.0018354827],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.004937868,0.0015896254,0.0023578058,0.006422511,0.0017632095,0.0036914935,0.0026220793,0.0024315605,0.64506763],"category_scores_gemma":[0.06576202,0.00079266867,0.0015204273,0.0031949119,0.0007742362,0.006567596,0.0036892632,0.0030700646,0.40642363],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040807463,0.000020061107,0.00016600254,0.00089555245,0.000009165411,0.00007343221,0.0000740294,0.000029384582,0.000020444353,0.00036519763,0.9693711,0.02893473],"study_design_scores_gemma":[0.00013985555,0.000049408285,0.002262403,0.0037047646,0.000023412187,0.0007684134,0.00037069788,0.000071065675,0.00009648271,0.002614285,0.9898443,0.00005483664],"about_ca_topic_score_codex":0.006469301,"about_ca_topic_score_gemma":0.014169442,"teacher_disagreement_score":0.35493237,"about_ca_system_score_codex":0.0031157504,"about_ca_system_score_gemma":0.007882026,"threshold_uncertainty_score":0.5062679},"labels":[],"label_agreement":null},{"id":"W6930247210","doi":"10.5281/zenodo.11472575","title":"✨༻꧂►►►(Special Discount Offer) Hurry Up, Shop Now!!◀◀◀✨༻꧂","year":2024,"lang":"pl","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Production (economics); Bottle; Work (physics)","score_opus":0.023218531701664456,"score_gpt":0.24639883415193006,"score_spread":0.2231803024502656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930247210","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012515814,0.0017577567,0.001172281,0.007940731,0.011419081,0.00028612354,0.0017710008,0.0037490316,0.9706525],"genre_scores_gemma":[0.0013743433,0.00060265,0.00034433373,0.00093038316,0.0007261742,0.000038436585,0.00036573317,0.0003813632,0.9952366],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996729,0.000027757262,0.000010854651,0.000043544453,0.00018228055,0.00006262657],"domain_scores_gemma":[0.9985832,0.00011328385,0.000049308946,0.00009196974,0.00051482295,0.00064737594],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0004727528,0.00070031855,0.00048544863,0.000838656,0.0013525293,0.0036261398,0.0007457703,0.0017521766,0.8684787],"category_scores_gemma":[0.0026730418,0.00044120516,0.00058054447,0.00043455238,0.00042145775,0.0032807884,0.0019083305,0.0020855374,0.8105283],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037058002,0.0000340368,0.000039195922,0.00006146006,0.0000012788026,0.000030563453,0.000022910359,0.000012946021,0.0003604017,0.0006728222,0.9629999,0.035727486],"study_design_scores_gemma":[0.000006698489,0.000018623354,0.00016083919,0.000029616798,0.0000015443992,0.000040927975,0.00005263085,0.000019996507,0.00014230916,0.00022089719,0.9993013,0.0000045376664],"about_ca_topic_score_codex":0.001760841,"about_ca_topic_score_gemma":0.0049347393,"teacher_disagreement_score":0.13152128,"about_ca_system_score_codex":0.00071786076,"about_ca_system_score_gemma":0.0007896327,"threshold_uncertainty_score":0.18759918},"labels":[],"label_agreement":null},{"id":"W6930254697","doi":"10.5281/zenodo.11500980","title":"LOST LOVE SPELL CASTER +27786186013 Win court case spell New York, Washington, Miami, USA Mexico, Malaysia, Estonia, Croatia, Belgium, Austria, Germany, Australia, Sweden, New Zealand, Canada, Indonesia, Seychelles, Bahamas, Panama, Finland.","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Spell; Psychic; Caster; Recklessness; Anecdote","score_opus":0.03350155789639354,"score_gpt":0.24321001550551533,"score_spread":0.2097084576091218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930254697","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011097688,0.00027694626,0.00009982766,0.0058364593,0.0015328572,0.00014447598,0.0006853286,0.0001715592,0.9901427],"genre_scores_gemma":[0.0026352985,0.00014435708,0.000036075708,0.001861177,0.00019378701,0.00005784631,0.00019030634,0.00007261969,0.9948085],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986033,0.000075209915,0.00004557959,0.0002469394,0.0005497379,0.00047924355],"domain_scores_gemma":[0.9982381,0.0001420301,0.000055762444,0.000107316846,0.00073032535,0.000726396],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005390199,0.0011443115,0.0005962154,0.0006833623,0.00680494,0.00412853,0.0019403793,0.0064017097,0.81707853],"category_scores_gemma":[0.0028086677,0.0008191976,0.0006690418,0.0006049316,0.00077538105,0.0025843987,0.0039237477,0.006194384,0.59086746],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023560271,0.0000456473,0.0003139192,0.000019424686,0.0000033717947,0.00028619272,0.000045061053,0.00003418261,0.00020167211,0.0015420215,0.98705065,0.010434273],"study_design_scores_gemma":[0.000026945405,0.000029984414,0.0017218183,0.000074859985,0.0000047335034,0.0001591843,0.00037615607,0.000091982285,0.00011526243,0.00029951677,0.99708825,0.000011273081],"about_ca_topic_score_codex":0.042941667,"about_ca_topic_score_gemma":0.17500801,"teacher_disagreement_score":0.18292147,"about_ca_system_score_codex":0.0033454723,"about_ca_system_score_gemma":0.004133089,"threshold_uncertainty_score":0.26091528},"labels":[],"label_agreement":null},{"id":"W6930296691","doi":"10.5281/zenodo.12140611","title":"Ul508a pdf deutsch","year":2024,"lang":"de","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"EMI; Sizing; Control (management); Blanket; Certification; Certificate; Path (computing)","score_opus":0.019662266723375836,"score_gpt":0.2360986876561721,"score_spread":0.21643642093279625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930296691","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00042848676,0.0017792865,0.0022356045,0.0010219942,0.002240254,0.00017313412,0.006637989,0.0049664136,0.98051685],"genre_scores_gemma":[0.0016962626,0.0010902556,0.00090694,0.0005598918,0.0002783371,0.00006427814,0.0037048403,0.0014933967,0.9902058],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99899226,0.00006274312,0.000056610872,0.00014035583,0.0006283499,0.00011977596],"domain_scores_gemma":[0.9976025,0.0002815355,0.000084117324,0.00032767007,0.0013512647,0.00035299768],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00082366937,0.0013984798,0.0011865513,0.003044241,0.0020821602,0.0077097667,0.0020741464,0.0024470622,0.86406446],"category_scores_gemma":[0.0036876283,0.0010055064,0.0010437011,0.0021134445,0.0008447631,0.0059349616,0.0030057672,0.0029197952,0.83840674],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007521705,0.000047552945,0.000067522255,0.00031514815,0.0000042585493,0.00013497414,0.000066048306,0.00009087152,0.0022071172,0.004777192,0.901391,0.090823084],"study_design_scores_gemma":[0.0000075102416,0.000014021615,0.00011697106,0.00006009875,0.0000022061063,0.00012153685,0.00003127561,0.000035078338,0.00073412404,0.00049819436,0.99837166,0.000007303862],"about_ca_topic_score_codex":0.0032654076,"about_ca_topic_score_gemma":0.004982409,"teacher_disagreement_score":0.13593554,"about_ca_system_score_codex":0.0015934788,"about_ca_system_score_gemma":0.0017974721,"threshold_uncertainty_score":0.19389546},"labels":[],"label_agreement":null},{"id":"W6930330807","doi":"10.5281/zenodo.12043641","title":"scarlett cole pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Romance; Legend; Chose; Knight; Club; White (mutation)","score_opus":0.01613585308476603,"score_gpt":0.22718924525945064,"score_spread":0.2110533921746846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930330807","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024743003,0.0005937938,0.000918436,0.00089234783,0.0020629042,0.00018254996,0.0019982974,0.0037402655,0.989364],"genre_scores_gemma":[0.00087948673,0.0003975534,0.00038732565,0.0004425406,0.00028838674,0.000038545408,0.0008714582,0.0012905211,0.99540424],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99917656,0.00004790773,0.00003598589,0.00009972153,0.00054819183,0.00009161126],"domain_scores_gemma":[0.9967528,0.0003605493,0.00010114879,0.0003672388,0.0017782727,0.00063997175],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00060463446,0.0014048885,0.0011299789,0.0026990988,0.0023828752,0.008178057,0.0018226876,0.002119119,0.93872404],"category_scores_gemma":[0.004694726,0.00084767607,0.00092469034,0.002213698,0.00074052927,0.0065939156,0.0028047296,0.0027075512,0.8931389],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023849258,0.000021828488,0.000024967245,0.00011404243,0.0000011028804,0.000040270832,0.000030173425,0.00002506346,0.0002417506,0.0010987568,0.9639563,0.034421925],"study_design_scores_gemma":[0.0000069367184,0.000011233096,0.00012792773,0.000045820172,0.0000012763281,0.00006266806,0.00005691454,0.000029109913,0.00014714409,0.00037274603,0.9991321,0.0000061795618],"about_ca_topic_score_codex":0.0038044003,"about_ca_topic_score_gemma":0.0100619495,"teacher_disagreement_score":0.06127596,"about_ca_system_score_codex":0.0013945465,"about_ca_system_score_gemma":0.0015559737,"threshold_uncertainty_score":0.08740264},"labels":[],"label_agreement":null},{"id":"W6930340615","doi":"10.5281/zenodo.11818625","title":"whirlpool fxvs6 manual pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Work (physics); Limiting; Filter (signal processing); Table (database)","score_opus":0.016413259002146744,"score_gpt":0.23878311623073453,"score_spread":0.2223698572285878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930340615","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000333175,0.00047152324,0.0033049982,0.00065926014,0.0014066709,0.00028135645,0.0067004412,0.015950551,0.970892],"genre_scores_gemma":[0.0009489098,0.0002570631,0.00092738366,0.00026761834,0.00015260639,0.000082075145,0.0028899459,0.00465552,0.989819],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895704,0.000057888454,0.000049703056,0.00014370472,0.00067392207,0.00011775225],"domain_scores_gemma":[0.9971482,0.00038933253,0.0000730285,0.00046436215,0.0015330237,0.00039206326],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009319395,0.0017508942,0.0012872638,0.003092075,0.0020337522,0.0065127234,0.0030908964,0.0023419634,0.9493204],"category_scores_gemma":[0.0050219935,0.0012351308,0.0010893091,0.0021655818,0.00083918596,0.0056593074,0.0032046547,0.0022881702,0.9179093],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004345145,0.000020950261,0.000026482729,0.00014234484,0.0000015623565,0.000034257017,0.000039739778,0.000040474177,0.00052559644,0.0010529041,0.9526118,0.045460485],"study_design_scores_gemma":[0.000013723013,0.000015497166,0.00012551872,0.000044521665,0.0000017486146,0.000056323774,0.000042227748,0.00004569005,0.00047279554,0.0005015112,0.998672,0.000008443158],"about_ca_topic_score_codex":0.0047508148,"about_ca_topic_score_gemma":0.0072620283,"teacher_disagreement_score":0.050679624,"about_ca_system_score_codex":0.0013567035,"about_ca_system_score_gemma":0.0016060631,"threshold_uncertainty_score":0.072288334},"labels":[],"label_agreement":null},{"id":"W6930375178","doi":"10.5281/zenodo.11750308","title":"Iso 7268 pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cover (algebra); Pace; Component (thermodynamics); Work (physics); Standard language","score_opus":0.01768101791592136,"score_gpt":0.23187782571152338,"score_spread":0.21419680779560202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930375178","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003939297,0.0014437672,0.008107525,0.00078774075,0.0030895714,0.00047571873,0.009096188,0.006032651,0.9705729],"genre_scores_gemma":[0.0023298508,0.0018999511,0.0044280803,0.00057753135,0.00052937906,0.00023121477,0.010389441,0.0030588056,0.9765559],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959175,0.0002263361,0.00025113692,0.0002906418,0.0030268405,0.00028755394],"domain_scores_gemma":[0.9920636,0.00037668523,0.0002123881,0.0006987667,0.006273156,0.00037544486],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0024208827,0.0023244373,0.001282027,0.00655173,0.0018133647,0.0083799455,0.0041620308,0.0032117912,0.6836434],"category_scores_gemma":[0.008244134,0.0011868384,0.0012846708,0.0054692253,0.0011910808,0.0070642806,0.0027535355,0.0024290357,0.7215398],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008365275,0.000059731894,0.00008266981,0.0005319306,0.0000053739786,0.000096714044,0.000068961184,0.0002587215,0.0018901835,0.0069621066,0.83684844,0.15311153],"study_design_scores_gemma":[0.0000068644913,0.000016713446,0.00012087244,0.000092074326,0.000002876065,0.000061784136,0.000031918968,0.000046482724,0.0005831769,0.0006572877,0.99837166,0.000008225559],"about_ca_topic_score_codex":0.008025459,"about_ca_topic_score_gemma":0.007340867,"teacher_disagreement_score":0.3163566,"about_ca_system_score_codex":0.0022244207,"about_ca_system_score_gemma":0.003993881,"threshold_uncertainty_score":0.4512443},"labels":[],"label_agreement":null},{"id":"W6930385198","doi":"10.5281/zenodo.12052780","title":"finimetal reggane 3000 vertical pdf","year":2024,"lang":"fr","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Limiting; Context (archaeology); Work (physics); Nucleofection","score_opus":0.018257895298133223,"score_gpt":0.23070397253457445,"score_spread":0.2124460772364412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930385198","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041108858,0.0004422294,0.0015886474,0.00039846275,0.0009265111,0.00016651762,0.0026932224,0.006759654,0.9866137],"genre_scores_gemma":[0.0013284829,0.0002885253,0.00051018794,0.00023208282,0.00007898555,0.00006000297,0.0012037538,0.0018931647,0.9944049],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99949765,0.000028662693,0.000018589833,0.00008294118,0.0002990415,0.000073115516],"domain_scores_gemma":[0.99864584,0.0001645399,0.00003933006,0.0002004446,0.00071457535,0.00023532395],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00048676206,0.0014150989,0.000837305,0.0019982185,0.0011700869,0.00403488,0.0024475267,0.0018739436,0.9271448],"category_scores_gemma":[0.002806333,0.0008800778,0.0007983373,0.0011843899,0.0007010871,0.0040673167,0.0027665286,0.0017465949,0.88074815],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008271928,0.000035086592,0.000042468342,0.0002917603,0.0000033743845,0.00005926198,0.00003849868,0.00007336207,0.001478754,0.0017545187,0.9014908,0.094649516],"study_design_scores_gemma":[0.000020266372,0.00003734082,0.0002525868,0.00008192288,0.0000039616807,0.00014230829,0.000052765514,0.00007752168,0.0010692668,0.0006465784,0.99760216,0.000013249818],"about_ca_topic_score_codex":0.0037094692,"about_ca_topic_score_gemma":0.007715485,"teacher_disagreement_score":0.072855175,"about_ca_system_score_codex":0.0010672152,"about_ca_system_score_gemma":0.0013797259,"threshold_uncertainty_score":0.10391909},"labels":[],"label_agreement":null},{"id":"W6930399310","doi":"10.5281/zenodo.13193885","title":"Figure 3 in Soil BON Earthworm - A global initiative on earthworm distribution, traits, and spatiotemporal diversity patterns","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"","keywords":"Earthworm; Diversity (politics); Oligochaeta (plant); Distribution (mathematics); Species diversity; Spatial distribution; Invertebrate","score_opus":0.021728997125918956,"score_gpt":0.22680426724173935,"score_spread":0.20507527011582039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930399310","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06660394,0.0014768651,0.0045361742,0.0008761793,0.0004270426,0.0001857155,0.7368833,0.0030984774,0.18591228],"genre_scores_gemma":[0.26847634,0.0024849547,0.016192734,0.0002854659,0.00009731365,0.00022650519,0.5229222,0.0007286486,0.18858577],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998431,0.0000148098525,0.0000068499626,0.000044179742,0.000057676938,0.00003343406],"domain_scores_gemma":[0.9997613,0.000017458015,0.000043341806,0.000022863891,0.00010742977,0.000047676356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022105337,0.00040888265,0.00016549396,0.0018183301,0.0002661057,0.00071801234,0.0002163977,0.00016681192,0.05571537],"category_scores_gemma":[0.00032170725,0.00011144291,0.00025525526,0.0028407979,0.00013917136,0.0002850118,0.0004622115,0.00025132,0.013402393],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054526445,0.00006552471,0.11555743,0.0012130343,0.00015239457,0.0002955101,0.00072472857,0.002057576,0.015812209,0.0060167545,0.6614655,0.19609404],"study_design_scores_gemma":[0.000032153697,0.000034939476,0.38650215,0.00012314974,0.000041219908,0.00017170297,0.00062881643,0.00054332067,0.0018694381,0.0006394566,0.60939664,0.000016989663],"about_ca_topic_score_codex":0.042821337,"about_ca_topic_score_gemma":0.103861585,"teacher_disagreement_score":0.05571537,"about_ca_system_score_codex":0.00044902065,"about_ca_system_score_gemma":0.0006004812,"threshold_uncertainty_score":0.18638647},"labels":[],"label_agreement":null},{"id":"W6930404410","doi":"10.5281/zenodo.13334172","title":"Smart Hemp Gummies Israel: ביקורות, מחיר והטבות","year":2024,"lang":"he","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Smart system; Internet of Things; Smart phone","score_opus":0.023134738709540376,"score_gpt":0.24157172182828296,"score_spread":0.21843698311874257,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930404410","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012462142,0.012562135,0.041868545,0.004758718,0.003922232,0.0008208099,0.007414622,0.014576572,0.90161425],"genre_scores_gemma":[0.041728623,0.00964387,0.024401419,0.0031537837,0.0007206539,0.00081533287,0.0063206973,0.003767412,0.90944827],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.999315,0.00006288118,0.000033398715,0.00013047537,0.00039115394,0.0000671291],"domain_scores_gemma":[0.9992705,0.000159486,0.000066189605,0.00010905726,0.00023604087,0.00015873277],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0010728488,0.0019341045,0.00093126326,0.0013908474,0.001123693,0.0017795617,0.0011197254,0.0019411184,0.3770567],"category_scores_gemma":[0.0018591284,0.0010540918,0.00061057194,0.000982804,0.00069135206,0.0023583567,0.0016909024,0.0034599295,0.31838635],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000588803,0.00020011951,0.00031788845,0.0017188075,0.000034220648,0.00065135845,0.00030715056,0.00038130264,0.20404066,0.010637812,0.5455891,0.23553273],"study_design_scores_gemma":[0.00006848184,0.00015614042,0.00047095385,0.00016476074,0.000021308158,0.00081105967,0.000115251256,0.00056070625,0.07861727,0.001599732,0.9173695,0.00004487749],"about_ca_topic_score_codex":0.00049599196,"about_ca_topic_score_gemma":0.0012377471,"teacher_disagreement_score":0.6229433,"about_ca_system_score_codex":0.0006336585,"about_ca_system_score_gemma":0.0008952253,"threshold_uncertainty_score":0.888553},"labels":[],"label_agreement":null},{"id":"W6930434764","doi":"10.5281/zenodo.11841640","title":"Necronomicon alhazred pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Incantation; Monster; Reign; Arabic; Period (music); Alien","score_opus":0.01731161874831137,"score_gpt":0.22474572104387827,"score_spread":0.2074341022955669,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930434764","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032526597,0.019618755,0.0072299414,0.0025643213,0.0046459353,0.00062794844,0.005695938,0.008586915,0.9477776],"genre_scores_gemma":[0.018404808,0.017450849,0.004667008,0.0027019728,0.0013917455,0.00028829963,0.009535779,0.0022097458,0.94334984],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991239,0.000079923724,0.000057801244,0.0001356418,0.00051988784,0.00008295698],"domain_scores_gemma":[0.99909556,0.000100026795,0.000067827415,0.00012573408,0.00041339968,0.00019748631],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00071078923,0.0012651284,0.0009917496,0.0026610873,0.0012342904,0.0027099368,0.0011137637,0.0018559395,0.53640574],"category_scores_gemma":[0.0012720992,0.0005697563,0.00063740043,0.0011443682,0.0007151946,0.002739661,0.001800979,0.0029518984,0.5194932],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043681526,0.00020082398,0.0001754855,0.0019055168,0.000018981122,0.00075198413,0.00010260833,0.00016259206,0.0661369,0.0042020394,0.6325799,0.29332638],"study_design_scores_gemma":[0.000029002715,0.00007674038,0.00025256904,0.00013134736,0.0000074710933,0.0006464007,0.000036547386,0.000067021014,0.009759996,0.0004530471,0.9885316,0.000008332986],"about_ca_topic_score_codex":0.00094053685,"about_ca_topic_score_gemma":0.0014022499,"teacher_disagreement_score":0.46359426,"about_ca_system_score_codex":0.0007843691,"about_ca_system_score_gemma":0.0009711281,"threshold_uncertainty_score":0.66126096},"labels":[],"label_agreement":null},{"id":"W6930450338","doi":"10.5281/zenodo.12015268","title":"apprendre à rédiger pdf gratuit","year":2024,"lang":"fr","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Language and gender; Leisure time; Virtual world","score_opus":0.017531528909790654,"score_gpt":0.2265848546499109,"score_spread":0.20905332574012025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930450338","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00057495973,0.00018179297,0.0003264711,0.0014114714,0.0015496365,0.00029096488,0.0024869787,0.0028141923,0.9903634],"genre_scores_gemma":[0.0021288344,0.00013289382,0.00019998587,0.0004923912,0.00039279708,0.00011594842,0.0009984896,0.0010637018,0.99447507],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984464,0.0001747963,0.000047827634,0.00013857294,0.0008798431,0.00031258285],"domain_scores_gemma":[0.994392,0.00060935493,0.0001646229,0.0008286476,0.0027328923,0.0012724985],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012947016,0.0011135442,0.0009915526,0.0025531603,0.0032620542,0.009038887,0.0015032787,0.0031098463,0.91518974],"category_scores_gemma":[0.0078060995,0.00061846606,0.00089434034,0.002068667,0.00087874,0.005369509,0.004265864,0.0023123315,0.8644155],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001758507,0.00002128248,0.000071089926,0.000045540524,0.0000012002038,0.00004012002,0.000034344757,0.000017599967,0.0001584423,0.000596642,0.9819303,0.017065926],"study_design_scores_gemma":[0.000015360822,0.00002078557,0.0007611371,0.00004557451,0.0000019604054,0.00005691226,0.00009640747,0.000040271098,0.0001740016,0.00026740093,0.99851006,0.000010145151],"about_ca_topic_score_codex":0.0062181447,"about_ca_topic_score_gemma":0.015659275,"teacher_disagreement_score":0.08481026,"about_ca_system_score_codex":0.001463248,"about_ca_system_score_gemma":0.0017407169,"threshold_uncertainty_score":0.12097144},"labels":[],"label_agreement":null},{"id":"W6930493993","doi":"10.5281/zenodo.12356947","title":"transport et tourisme pdf","year":2024,"lang":"fr","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tourism; Air transport; Directory; Destinations","score_opus":0.017388023538301912,"score_gpt":0.2332529581656159,"score_spread":0.215864934627314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930493993","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030727772,0.00032068748,0.00035806265,0.0008237542,0.0020164712,0.00009471804,0.002928835,0.001979712,0.9911705],"genre_scores_gemma":[0.00091340207,0.0003027063,0.00017990996,0.00034893205,0.00019455538,0.000022940005,0.001243167,0.0008102958,0.9959841],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995921,0.000026794292,0.000015996413,0.000052255105,0.00023946192,0.000073394134],"domain_scores_gemma":[0.9987608,0.00010466243,0.000032014133,0.00012302551,0.00065923296,0.00032018608],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00033774818,0.0010265616,0.0007622017,0.0016388461,0.0019836144,0.006943644,0.0011370904,0.0017921006,0.943239],"category_scores_gemma":[0.0023536023,0.00046996347,0.00087521254,0.0019307927,0.0005479679,0.005079984,0.0030668452,0.0021820457,0.9049917],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021316115,0.000019925998,0.000038317157,0.000112042544,0.0000013556178,0.00004630327,0.00003471151,0.00003108044,0.00020521642,0.00093809614,0.96701294,0.031538732],"study_design_scores_gemma":[0.000006880303,0.000009510305,0.0001826003,0.000048019912,0.0000010767161,0.00004169413,0.00007900115,0.000022647097,0.00011505841,0.00020739133,0.99928087,0.0000052205237],"about_ca_topic_score_codex":0.0050257305,"about_ca_topic_score_gemma":0.011194345,"teacher_disagreement_score":0.056761026,"about_ca_system_score_codex":0.0012275834,"about_ca_system_score_gemma":0.0012419388,"threshold_uncertainty_score":0.08096266},"labels":[],"label_agreement":null},{"id":"W6930497761","doi":"10.5281/zenodo.12066574","title":"Pure Slim Keto ACV Gummies Canada Reviews – Fit Science ACV Gummies!","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Limiting; Quality (philosophy); Work (physics); Ridiculous; Order (exchange); Population","score_opus":0.028492978735245946,"score_gpt":0.2509114301865247,"score_spread":0.22241845145127873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930497761","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046455587,0.80790263,0.00095945416,0.012185627,0.012762497,0.00045435657,0.0027046932,0.0010826014,0.16148353],"genre_scores_gemma":[0.0034449282,0.74975264,0.0019701752,0.014136288,0.0031129543,0.0003993792,0.0025529063,0.00047074215,0.22416006],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99842846,0.0002035475,0.0001689439,0.00012783006,0.0009498107,0.000121508885],"domain_scores_gemma":[0.99300164,0.0015752976,0.0006355909,0.00026322523,0.0038597053,0.0006644836],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001393282,0.00087644,0.0010387681,0.0037571979,0.00074917503,0.0036652666,0.0010126609,0.0019042804,0.2144532],"category_scores_gemma":[0.008016004,0.0004975819,0.0010293385,0.0035851847,0.00061569596,0.0029793298,0.0011809337,0.0020027033,0.09922961],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006190522,0.000031717515,0.000067628935,0.0154824965,0.000044542117,0.00004976739,0.000078362704,0.000028762752,0.00098598,0.0013941653,0.72297704,0.25879765],"study_design_scores_gemma":[0.000009433567,0.000015032661,0.00013608669,0.0032704538,0.000022394821,0.000045279223,0.000029613506,0.000007140783,0.00010910269,0.00016779626,0.9961826,0.000005081637],"about_ca_topic_score_codex":0.013005498,"about_ca_topic_score_gemma":0.033994,"teacher_disagreement_score":0.7855468,"about_ca_system_score_codex":0.0022036822,"about_ca_system_score_gemma":0.006606077,"threshold_uncertainty_score":0.7174175},"labels":[],"label_agreement":null},{"id":"W6930516567","doi":"10.5281/zenodo.11745292","title":"Heikin ashi strategie pdf","year":2024,"lang":"de","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"GDP deflator; Product category; Focus (optics); China; Terms of trade; Quarter (Canadian coin); Representation (politics); White (mutation)","score_opus":0.023884724182557406,"score_gpt":0.24137880372121293,"score_spread":0.21749407953865552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930516567","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00029211876,0.00042995057,0.0022476062,0.0012492697,0.0010358741,0.00010325695,0.0010043489,0.0016737696,0.99196386],"genre_scores_gemma":[0.0017448871,0.0005488622,0.0016249445,0.0004662951,0.00017011946,0.00006036555,0.0008081378,0.0008615333,0.99371487],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9992418,0.00006531767,0.000032434622,0.00009162214,0.00045492512,0.00011398189],"domain_scores_gemma":[0.99900925,0.00012043869,0.000033752087,0.000119467935,0.00038068186,0.00033632],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00069898507,0.0015238421,0.0006497725,0.0014896225,0.0017397659,0.0074607953,0.0013681289,0.0017949569,0.7392725],"category_scores_gemma":[0.0023354115,0.00065540423,0.00074673456,0.0011784907,0.0007403179,0.0049923714,0.0034405817,0.0027067477,0.65784925],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004952266,0.000047762747,0.00007467009,0.00019238972,0.0000035622086,0.000090482485,0.00013584299,0.00017066776,0.00046528934,0.012899743,0.8985048,0.08736529],"study_design_scores_gemma":[0.0000045959623,0.0000093921935,0.00009160517,0.00004559442,0.0000013163208,0.000043072858,0.00008003796,0.00006211181,0.00023010351,0.0014026235,0.9980227,0.000006768041],"about_ca_topic_score_codex":0.0030298636,"about_ca_topic_score_gemma":0.0093327295,"teacher_disagreement_score":0.26072752,"about_ca_system_score_codex":0.002274655,"about_ca_system_score_gemma":0.0028920895,"threshold_uncertainty_score":0.37189615},"labels":[],"label_agreement":null},{"id":"W6930560882","doi":"10.5281/zenodo.12260270","title":"how to download the economist pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Download; Reading (process); Politics; Information economics; Developing country; Economic analysis; Variety (cybernetics); Caveat emptor","score_opus":0.0166586836561873,"score_gpt":0.2168034776543097,"score_spread":0.2001447939981224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930560882","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015573569,0.00040087503,0.000552652,0.0019820307,0.0008727724,0.00015722787,0.0036817947,0.0021292688,0.9900676],"genre_scores_gemma":[0.0015185009,0.0007969988,0.00071911357,0.0012310424,0.00047826083,0.00015300894,0.0024502429,0.0013883021,0.9912646],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989213,0.000072368326,0.000044058386,0.00012427293,0.0007217084,0.00011630777],"domain_scores_gemma":[0.998355,0.00022954638,0.000064974345,0.00024506377,0.00079351885,0.0003119429],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006870158,0.0008392559,0.000898568,0.0027874014,0.0013034348,0.0058829365,0.001140217,0.0019553236,0.8807705],"category_scores_gemma":[0.006409713,0.0008344408,0.0008181156,0.0029702883,0.00052585546,0.0041313185,0.0016826991,0.0022696157,0.87266594],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015116786,0.000013511397,0.00002848638,0.0000530699,0.0000015724105,0.000018158802,0.000007151337,0.000025188288,0.000092315335,0.0014516074,0.973089,0.025204757],"study_design_scores_gemma":[0.0000069910056,0.0000060765965,0.00020840052,0.000030433006,0.0000013122,0.000014940552,0.000020337702,0.000024794866,0.00007393885,0.0005703138,0.999037,0.0000054021993],"about_ca_topic_score_codex":0.0050084847,"about_ca_topic_score_gemma":0.011706121,"teacher_disagreement_score":0.119229496,"about_ca_system_score_codex":0.0022091833,"about_ca_system_score_gemma":0.002514796,"threshold_uncertainty_score":0.17006642},"labels":[],"label_agreement":null},{"id":"W6930655674","doi":"10.5281/zenodo.12519174","title":"+256751735278 @$$# !!!Strong Death spells in Australia, Canada // Revenge Death spells caster In Malaysia, Poland.","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Spell; MAGIC (telescope); Harm; Wife; Work (physics)","score_opus":0.033055672635808206,"score_gpt":0.2514711147373844,"score_spread":0.2184154421015762,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930655674","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014339868,0.0010284432,0.0005109079,0.00817627,0.004086577,0.00022429325,0.001159729,0.0025798534,0.9807998],"genre_scores_gemma":[0.0008316382,0.00023010702,0.00011205604,0.0013010647,0.00011880236,0.000024664205,0.00016966494,0.00030885273,0.996903],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99915767,0.00009060141,0.00003252897,0.00017196618,0.000291655,0.00025552683],"domain_scores_gemma":[0.99384695,0.00027427435,0.00015428418,0.00017638165,0.0014579485,0.004090107],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00070514844,0.0010928973,0.0009051395,0.00079236546,0.0043045557,0.0047609555,0.001092036,0.003295325,0.93636495],"category_scores_gemma":[0.0031625498,0.000836527,0.0007385334,0.00058296166,0.0007692688,0.0027984655,0.0043093385,0.0031029151,0.8898267],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002819429,0.00002565587,0.00017599313,0.00005501889,0.0000014549214,0.00006619024,0.00007731223,0.000014801314,0.00020020422,0.0002220393,0.9782808,0.020852365],"study_design_scores_gemma":[0.00001094674,0.00003359995,0.00066475075,0.00008475342,0.0000024029719,0.00016593185,0.000377592,0.00003414981,0.00009629352,0.00007494314,0.9984452,0.000009521756],"about_ca_topic_score_codex":0.011955903,"about_ca_topic_score_gemma":0.033456612,"teacher_disagreement_score":0.06363505,"about_ca_system_score_codex":0.0019075413,"about_ca_system_score_gemma":0.00276983,"threshold_uncertainty_score":0.09076768},"labels":[],"label_agreement":null},{"id":"W6930672475","doi":"10.5281/zenodo.12345257","title":"neuropathy symptom score pdf","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Diabetic neuropathy; Neuropathic pain; Peripheral neuropathy; Polyneuropathy; Weakness; Diabetes mellitus; Severity of illness; Disease; Physical examination","score_opus":0.018865651604286368,"score_gpt":0.22394133000527383,"score_spread":0.20507567840098745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930672475","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014097951,0.004551706,0.0025620381,0.0034801837,0.0024287966,0.0012481388,0.121751375,0.005875239,0.8440046],"genre_scores_gemma":[0.035639573,0.006324966,0.0037616657,0.0021851682,0.0007568827,0.0007849677,0.0862052,0.0016996018,0.86264193],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99936444,0.000044731514,0.00004834426,0.000060054306,0.00040385805,0.00007856018],"domain_scores_gemma":[0.9984503,0.00010686939,0.00011020597,0.00006105149,0.0010044675,0.00026707732],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00046716214,0.0011221082,0.0016034066,0.0016775572,0.00070502993,0.0017921124,0.000983454,0.0009688695,0.63365257],"category_scores_gemma":[0.0023627314,0.00019434356,0.0010459144,0.0010524803,0.00019933969,0.0019049594,0.0013408995,0.0018330225,0.355479],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039624012,0.00015383265,0.0015746462,0.00042736263,0.0000340509,0.00018614426,0.000034470482,0.000112919,0.0008226549,0.00018865378,0.8890307,0.10703847],"study_design_scores_gemma":[0.000388757,0.00070569024,0.045603096,0.0011540424,0.00011450754,0.0023001602,0.00025002088,0.0004179458,0.0017595991,0.00095903786,0.94625133,0.00009581762],"about_ca_topic_score_codex":0.0038548158,"about_ca_topic_score_gemma":0.0077719716,"teacher_disagreement_score":0.36634743,"about_ca_system_score_codex":0.000819159,"about_ca_system_score_gemma":0.00080650736,"threshold_uncertainty_score":0.5225501},"labels":[],"label_agreement":null},{"id":"W6930703496","doi":"10.5281/zenodo.15218804","title":"Thereva kristinae Holston & Irwin 2005","year":2025,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Royal British Columbia Museum","funders":"","keywords":"Period (music); West coast; Indian ocean; Historical record","score_opus":0.017103373345172,"score_gpt":0.2417771426899069,"score_spread":0.2246737693447349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930703496","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09822634,0.020447155,0.0026402564,0.000787318,0.00094466,0.0004512746,0.005388527,0.0007472106,0.8703671],"genre_scores_gemma":[0.7334567,0.010959787,0.0055449936,0.0007354216,0.00043188367,0.00029261224,0.0039022814,0.00030230553,0.24437407],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997391,0.00002224397,0.000021672935,0.00009131541,0.00007933492,0.00004630377],"domain_scores_gemma":[0.9996344,0.000054217468,0.00013976156,0.00006409408,0.0000727905,0.00003472659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016392094,0.0008178864,0.00049705664,0.0018971665,0.0017805208,0.0007241785,0.0008422281,0.00060199253,0.070098236],"category_scores_gemma":[0.00052988133,0.00044179588,0.00023155942,0.00095535547,0.0007549155,0.0012720744,0.0009615311,0.0006565205,0.021751976],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004541457,0.000103242426,0.017782934,0.0010732725,0.00004922174,0.00083535624,0.0022433202,0.00018114998,0.012793157,0.0041725617,0.12555215,0.83475953],"study_design_scores_gemma":[0.000038786988,0.000093842005,0.11790078,0.0009676899,0.000052215553,0.0018184271,0.0014520237,0.000100378464,0.0014087113,0.00078161556,0.8753631,0.000022355936],"about_ca_topic_score_codex":0.01373712,"about_ca_topic_score_gemma":0.04276511,"teacher_disagreement_score":0.070098236,"about_ca_system_score_codex":0.0006561746,"about_ca_system_score_gemma":0.0005599572,"threshold_uncertainty_score":0.23450196},"labels":[],"label_agreement":null},{"id":"W6930847884","doi":"10.5281/zenodo.13741179","title":"Fig. 2 in Small shelly fossils from the argillaceous facies of the Lower Cambrian Forteau Formation of western Newfoundland","year":2007,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Dorsum; Facies; Scale (ratio); Apex (geometry); Subsidence","score_opus":0.021348092583423114,"score_gpt":0.22179986698646575,"score_spread":0.20045177440304263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930847884","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9547304,0.0018314123,0.00068142364,0.000065631975,0.00005013889,0.00004310601,0.0044327285,0.00015040254,0.038014665],"genre_scores_gemma":[0.98088706,0.00036685815,0.0013923116,0.00003882638,0.000012860031,0.000020651729,0.0023334094,0.000036302405,0.014911648],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988437,0.0000047518142,0.000005295817,0.00005498338,0.000020413134,0.000030255469],"domain_scores_gemma":[0.99988174,0.000015250263,0.000045842615,0.000012885608,0.000022976337,0.000021261378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008449114,0.00034408917,0.00017938971,0.0019695275,0.0015285617,0.000494728,0.00031898124,0.0003054057,0.011278115],"category_scores_gemma":[0.00022850515,0.00018261823,0.00016603783,0.0014769265,0.00078252255,0.0002445728,0.0004133683,0.00025706206,0.0018401956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010260191,0.0000885366,0.6562551,0.00058237003,0.0001309425,0.0033295213,0.005927846,0.0005211462,0.07741498,0.0009996812,0.011111684,0.24261214],"study_design_scores_gemma":[0.0000037947336,0.000025543357,0.98175883,0.000040993404,0.000022363376,0.0008931818,0.0005823496,0.000057547146,0.00093236205,0.000028840454,0.015649935,0.0000042433476],"about_ca_topic_score_codex":0.17710641,"about_ca_topic_score_gemma":0.56045634,"teacher_disagreement_score":0.8228936,"about_ca_system_score_codex":0.001494801,"about_ca_system_score_gemma":0.000387355,"threshold_uncertainty_score":0.3521511},"labels":[],"label_agreement":null},{"id":"W6930856577","doi":"10.5281/zenodo.15178441","title":"Deterioro cognitivo en pacientes con hipoacusias comparados con pacientes con audición normal","year":2025,"lang":"es","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Sensorineural hearing loss; Hearing loss; Reference values; Cognitive impairment","score_opus":0.017552729880265284,"score_gpt":0.25469654203430003,"score_spread":0.23714381215403474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930856577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970107,0.00128417,0.00012453472,0.000058814476,0.0000120650175,0.000019684006,0.00017169506,0.000004929522,0.0013133789],"genre_scores_gemma":[0.9991115,0.0003891126,0.00011798291,0.000027719034,0.00001485202,0.000012975392,0.000111841175,8.513256e-7,0.0002130663],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99954873,0.00009102155,0.00008474455,0.00008646132,0.00008997795,0.000099121025],"domain_scores_gemma":[0.9985183,0.00032615615,0.0007483446,0.00003824119,0.00017952459,0.00018948941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006711307,0.0003936525,0.0005459228,0.0015691336,0.00052667485,0.00075453153,0.00015633927,0.00037866514,0.0039302534],"category_scores_gemma":[0.0025308754,0.00016706166,0.00035228947,0.0010760783,0.0004702857,0.00052619085,0.00054716837,0.00031964332,0.00037570443],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031744447,0.00005055774,0.9919376,0.000057303143,0.00004341938,0.00045044502,0.00029435885,0.000026113428,0.0007024796,0.000017835886,0.00006953904,0.006032989],"study_design_scores_gemma":[0.000010022859,0.00033282404,0.9970374,0.000038018923,0.00003866388,0.0013884734,0.00072307733,0.00004842309,0.00014914609,0.000046342753,0.00018239443,0.0000051983325],"about_ca_topic_score_codex":0.0035852597,"about_ca_topic_score_gemma":0.0032003867,"teacher_disagreement_score":0.0039302534,"about_ca_system_score_codex":0.00033296214,"about_ca_system_score_gemma":0.00042819456,"threshold_uncertainty_score":0.01314795},"labels":[],"label_agreement":null},{"id":"W6930859968","doi":"10.5281/zenodo.14655113","title":"Fig. 2. Buluka huddlestoni Austin, 1989, female holotype from NHM. A in Description of five new species of the rare genus Buluka (Hymenoptera: Braconidae: Microgastrinae) with an updated key to the world species","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Holotype; Key (lock); Dorsum; Genus; Paratype","score_opus":0.024895529458117644,"score_gpt":0.2236362805161808,"score_spread":0.19874075105806316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930859968","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15223983,0.0071465103,0.0021259077,0.001103894,0.0014389207,0.000953895,0.026797786,0.00086458726,0.80732864],"genre_scores_gemma":[0.5349362,0.0033731596,0.0061555183,0.00050249835,0.00026306833,0.00081459293,0.02108138,0.00021480044,0.43265876],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999503,0.0000043688806,0.0000021992155,0.000018245106,0.000014815183,0.000010204734],"domain_scores_gemma":[0.9999399,0.000004854232,0.000015148433,0.000004183891,0.000013592145,0.000022316523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004759556,0.0005225963,0.00023319255,0.0013148504,0.0011495228,0.00028448048,0.00053170574,0.00029220825,0.076328404],"category_scores_gemma":[0.00013993826,0.00022419929,0.00008608796,0.0011706633,0.00051512057,0.0004469772,0.0009099837,0.00041661796,0.023996016],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066836417,0.0001583362,0.044583652,0.0008751952,0.000023866465,0.0028899172,0.0028735022,0.00021740582,0.024518138,0.0026011053,0.3933397,0.5272509],"study_design_scores_gemma":[0.000049914626,0.00010434609,0.27575067,0.0002556198,0.000025065114,0.0025173912,0.0042298734,0.0000992632,0.0016071288,0.0005357967,0.71480256,0.000022385388],"about_ca_topic_score_codex":0.027518837,"about_ca_topic_score_gemma":0.08432357,"teacher_disagreement_score":0.076328404,"about_ca_system_score_codex":0.00055663346,"about_ca_system_score_gemma":0.00038093983,"threshold_uncertainty_score":0.2553439},"labels":[],"label_agreement":null},{"id":"W6930869103","doi":"10.5281/zenodo.15692180","title":"Fig. 3 in A comparative analysis of life-history features and adaptive strategies of Arctic and subarctic seal species--who will win the climate change challenge?","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Blubber; Subarctic climate; Arctic; Seasonality; Climate change; Harbour; Seal (emblem)","score_opus":0.043172276682228505,"score_gpt":0.2455353925009065,"score_spread":0.202363115818678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930869103","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8737113,0.0021610116,0.0029494476,0.00039801822,0.000073468254,0.00005617438,0.051781327,0.0005724312,0.06829678],"genre_scores_gemma":[0.96044225,0.0009835132,0.0034645265,0.00006971683,0.000013479297,0.000032129108,0.01260467,0.00008833842,0.02230143],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999424,0.000008652025,0.0000021903716,0.000019825127,0.0000063365396,0.000020628324],"domain_scores_gemma":[0.99985266,0.00003702288,0.000029882507,0.000017123968,0.000034417888,0.000028772141],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015568295,0.0002355669,0.00012534468,0.001608762,0.0006082298,0.0005827086,0.00016703841,0.00015866496,0.03255923],"category_scores_gemma":[0.00030114705,0.00007518466,0.0004259542,0.0013181544,0.00025151655,0.00018680375,0.0003025093,0.00013094649,0.0029298994],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011171752,0.000076043,0.7627231,0.0007437755,0.00032350083,0.0006038255,0.0034809068,0.0043239826,0.039199613,0.0055371867,0.040107414,0.14176348],"study_design_scores_gemma":[0.000004686512,0.000033439326,0.981282,0.000024902925,0.000025823108,0.00016122706,0.000741995,0.00033568285,0.00030752813,0.0002685382,0.016808635,0.0000055181545],"about_ca_topic_score_codex":0.06635296,"about_ca_topic_score_gemma":0.14101519,"teacher_disagreement_score":0.06635296,"about_ca_system_score_codex":0.00042533828,"about_ca_system_score_gemma":0.00024063987,"threshold_uncertainty_score":0.13193351},"labels":[],"label_agreement":null},{"id":"W6930871234","doi":"10.5281/zenodo.16354619","title":"Characterization of Onshore Formations in Nova Scotia for CO2 Storage","year":2024,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Geological Survey of Canada; Memorial University of Newfoundland","funders":"","keywords":"Permeability (electromagnetism); Porosity; Petrography; Caprock; Lithology; Carbon dioxide","score_opus":0.025560148829064166,"score_gpt":0.24637164461403838,"score_spread":0.22081149578497422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930871234","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959765,0.00019586919,0.0001492744,0.0000236359,0.0000047333506,0.00004873733,0.0006689513,0.000008526299,0.0029236756],"genre_scores_gemma":[0.99684155,0.00015148541,0.0004683046,0.00003154923,0.0000021997337,0.000022029912,0.00046533337,0.000006861747,0.002010706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998266,0.000004337191,0.000011381906,0.000039635022,0.000062147745,0.000056082077],"domain_scores_gemma":[0.99972874,0.000017996907,0.000056880737,0.000013328391,0.00012097154,0.000062083316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014015165,0.00033551434,0.00027312938,0.0018448329,0.0014166227,0.0008054107,0.0005717697,0.00023804868,0.0010124553],"category_scores_gemma":[0.00033203082,0.00032570836,0.00023125716,0.0012530437,0.0007899537,0.00015776191,0.00056111574,0.00016852753,0.00024580923],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017552302,0.000051250794,0.9384237,0.00012947897,0.00006453899,0.0020074926,0.0020714088,0.0014175854,0.042690672,0.00023465636,0.00049779285,0.01223589],"study_design_scores_gemma":[0.0000048946167,0.000016339009,0.99659413,0.00001874331,0.000007981473,0.00014907609,0.0008310579,0.00040903388,0.0010141504,0.000010799096,0.00093943893,0.000004329035],"about_ca_topic_score_codex":0.8322812,"about_ca_topic_score_gemma":0.95284855,"teacher_disagreement_score":0.16771883,"about_ca_system_score_codex":0.0032070363,"about_ca_system_score_gemma":0.0035175772,"threshold_uncertainty_score":0.33741307},"labels":[],"label_agreement":null},{"id":"W6930872492","doi":"10.5281/zenodo.2639774","title":"pynbody/pynbody: Version 0.47","year":2019,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Toronto","funders":"","keywords":"Python (programming language); Crash; Halo; Smoothing; Hash function; Thread (computing)","score_opus":0.015342649568896288,"score_gpt":0.22071697496307735,"score_spread":0.20537432539418107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6930872492","genre_codex":"software","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":"software","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016468964,0.00030831268,0.067175254,0.00044917603,0.00046818028,0.00015870351,0.028343467,0.88014305,0.021307042],"genre_scores_gemma":[0.015440122,0.00035871437,0.0495142,0.00097535504,0.00019595781,0.00048483696,0.063043095,0.8340106,0.03597706],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980336,0.0001687697,0.00014196255,0.0003864179,0.0009018299,0.0003675089],"domain_scores_gemma":[0.995814,0.0006101338,0.00022945486,0.0012344858,0.0016970385,0.00041474283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030736057,0.0036051304,0.0018765106,0.0024224909,0.0016182569,0.00470818,0.0068930835,0.001984688,0.28790027],"category_scores_gemma":[0.010941879,0.0042523453,0.004167006,0.0016566071,0.001172479,0.0072014513,0.006395592,0.0052258237,0.29000264],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005622185,0.000085850676,0.0028737749,0.0005829879,0.000117455704,0.00022733018,0.00026825254,0.0012133396,0.004901801,0.005294154,0.9389301,0.04494273],"study_design_scores_gemma":[0.00031283838,0.000060742397,0.0043203966,0.00031437987,0.00008409474,0.00063035527,0.00008639445,0.011759613,0.023450779,0.011744476,0.9469557,0.00028033854],"about_ca_topic_score_codex":0.008014223,"about_ca_topic_score_gemma":0.0050353324,"teacher_disagreement_score":0.28790027,"about_ca_system_score_codex":0.0019105988,"about_ca_system_score_gemma":0.002982181,"threshold_uncertainty_score":0.96312237},"labels":[],"label_agreement":null},{"id":"W6931024577","doi":"10.5281/zenodo.2597526","title":"fMRIPrep: a robust preprocessing pipeline for functional MRI","year":2019,"lang":"en","type":"other","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Pipeline (software); Preprocessor; Workflow; Pattern recognition (psychology); Pipeline transport","score_opus":0.03672271298316098,"score_gpt":0.24616454598777698,"score_spread":0.209441833004616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931024577","genre_codex":"methods","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025655031,0.0018186355,0.6571977,0.0009586351,0.000642429,0.00062988885,0.047660843,0.27357945,0.014946894],"genre_scores_gemma":[0.02051822,0.0016041795,0.75506335,0.0019659009,0.0005296201,0.0035437634,0.07829819,0.113722354,0.024754418],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99904937,0.00017339816,0.00010604986,0.00030465084,0.00025640105,0.00011019735],"domain_scores_gemma":[0.99808085,0.0008022286,0.00014150157,0.0004374728,0.0004203287,0.000117587384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026843715,0.0030755438,0.0013814791,0.0028762042,0.0014849091,0.0034388553,0.0038636462,0.002439205,0.13002808],"category_scores_gemma":[0.0078910515,0.0021703525,0.0019651486,0.0016952029,0.0007185843,0.0018682452,0.0035074796,0.0032995434,0.10145918],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008216647,0.00008945957,0.00088811835,0.0016164308,0.0003534569,0.00060760125,0.0002769281,0.0027611481,0.033871103,0.006622109,0.75445986,0.19763224],"study_design_scores_gemma":[0.00046501917,0.00021283733,0.005357406,0.00055356266,0.0002879777,0.0030273446,0.00013447815,0.037189446,0.08536984,0.06772225,0.79907846,0.0006013994],"about_ca_topic_score_codex":0.0019799345,"about_ca_topic_score_gemma":0.004954785,"teacher_disagreement_score":0.13002808,"about_ca_system_score_codex":0.0006589188,"about_ca_system_score_gemma":0.0020007847,"threshold_uncertainty_score":0.43498725},"labels":[],"label_agreement":null},{"id":"W6931107089","doi":"10.5281/zenodo.3541300","title":"NPA_ref711","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Lipid A; Lipopolysaccharide; Antagonist; Blocking (statistics)","score_opus":0.01621434576774545,"score_gpt":0.2169550574507213,"score_spread":0.20074071168297586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931107089","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005122957,0.0049745804,0.0012852402,0.005867025,0.05569159,0.00071155094,0.23099619,0.0038532906,0.6961082],"genre_scores_gemma":[0.004811554,0.006166538,0.002895099,0.004157442,0.0076128207,0.0005868326,0.22629163,0.0027720619,0.74470603],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982362,0.00009869346,0.00020396081,0.0002512369,0.00096134323,0.00024855038],"domain_scores_gemma":[0.995355,0.0005591958,0.0002118474,0.00040151874,0.00267326,0.00079919415],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00087585486,0.0017331805,0.002782298,0.009127259,0.004121815,0.008812371,0.0038984832,0.0046524284,0.91523975],"category_scores_gemma":[0.0059402357,0.0014781366,0.0021396575,0.010536168,0.0011128236,0.0066667865,0.0039691036,0.002885084,0.8447735],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004977456,0.00003853965,0.00009393736,0.001080964,0.000009639222,0.000105865794,0.000018906892,0.000036475765,0.00037017278,0.0012709579,0.9776628,0.019261966],"study_design_scores_gemma":[0.000033022414,0.000014689538,0.0007283641,0.00031450775,0.000008106038,0.00013533354,0.000025077601,0.000035255543,0.00026486788,0.0007831395,0.9976406,0.000017093515],"about_ca_topic_score_codex":0.010395405,"about_ca_topic_score_gemma":0.009732855,"teacher_disagreement_score":0.08476025,"about_ca_system_score_codex":0.003505572,"about_ca_system_score_gemma":0.005188652,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W6931112966","doi":"10.5281/zenodo.4367873","title":"Bromus secalinus Linnaeus 1753","year":2007,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bromus; Taxon; Genus; Type (biology); Nomenclature","score_opus":0.02144626153163333,"score_gpt":0.2392670811212981,"score_spread":0.21782081958966476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931112966","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5343757,0.013565194,0.0033511247,0.0008660725,0.0007728851,0.00022815708,0.0040408405,0.0010354988,0.4417645],"genre_scores_gemma":[0.90384245,0.0033582181,0.0036703194,0.0008256711,0.00015707733,0.00007076109,0.0025613334,0.00006178552,0.08545233],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989486,0.000012731063,0.0000054215798,0.00003587923,0.000034288743,0.000016770997],"domain_scores_gemma":[0.99993384,0.00000990756,0.000022896294,0.0000057452385,0.000014770036,0.000012844503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011829197,0.0005367205,0.00028502266,0.0010896625,0.001077086,0.00020931693,0.00030789393,0.0002355049,0.011125658],"category_scores_gemma":[0.00014142536,0.00012982491,0.00009359887,0.00047640892,0.00021511671,0.0006216499,0.0007666247,0.0002669053,0.0068392972],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082921644,0.00023535707,0.06686883,0.000777982,0.00009345534,0.00250858,0.0032240613,0.00034096598,0.13714188,0.004839735,0.039270133,0.74386984],"study_design_scores_gemma":[0.00006072539,0.00046284866,0.27153137,0.00019082644,0.00006406342,0.0063443114,0.0018199079,0.00026197007,0.007821544,0.0016038477,0.7097894,0.000049335977],"about_ca_topic_score_codex":0.005584441,"about_ca_topic_score_gemma":0.020505983,"teacher_disagreement_score":0.011125658,"about_ca_system_score_codex":0.00031317695,"about_ca_system_score_gemma":0.0001262631,"threshold_uncertainty_score":0.037219048},"labels":[],"label_agreement":null},{"id":"W6931121979","doi":"10.5281/zenodo.3542057","title":"NPA_ref11767","year":2019,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Nucleoside; Parity (physics); Purine nucleoside phosphorylase; Samarium","score_opus":0.015966683688059997,"score_gpt":0.21728419019246922,"score_spread":0.20131750650440922,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931121979","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006515413,0.0075543146,0.0012366788,0.006035256,0.045679078,0.0006265815,0.24121611,0.0032781588,0.6937223],"genre_scores_gemma":[0.0051988326,0.0085526295,0.0024216555,0.0034393268,0.007506823,0.0005985218,0.22838557,0.002486153,0.7414105],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983413,0.00009614028,0.00022017055,0.00027073667,0.00083842006,0.00023322007],"domain_scores_gemma":[0.9952473,0.00052843464,0.0002663323,0.00040969133,0.002753385,0.0007948666],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009060135,0.0018417747,0.0031470067,0.010921787,0.0033919057,0.009217723,0.0039056484,0.004287357,0.91192216],"category_scores_gemma":[0.0060877325,0.00131667,0.0019275446,0.013309503,0.0010555851,0.00654546,0.0036867736,0.0023604366,0.82117796],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048596172,0.000028168255,0.00008742674,0.001389149,0.00001304912,0.00009859743,0.000018811495,0.000035997044,0.00034670354,0.0015164147,0.97480917,0.021608014],"study_design_scores_gemma":[0.00003752533,0.000015793441,0.00070242136,0.0004197102,0.000014414666,0.00013100238,0.000027432106,0.00003592249,0.00027507253,0.0009861094,0.99733824,0.000016224722],"about_ca_topic_score_codex":0.009299125,"about_ca_topic_score_gemma":0.009479286,"teacher_disagreement_score":0.08807784,"about_ca_system_score_codex":0.0035576355,"about_ca_system_score_gemma":0.0056219874,"threshold_uncertainty_score":0.12563235},"labels":[],"label_agreement":null},{"id":"W6931159299","doi":"10.5281/zenodo.4258622","title":"©Ver {HD} Antrum (2020) Película completa cgb","year":2020,"lang":"es","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Illusion; Entertainment; Motion picture; Video recording","score_opus":0.028678394990871867,"score_gpt":0.23342210512134212,"score_spread":0.20474371013047027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931159299","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005505525,0.00040183056,0.0017327251,0.00030400683,0.0010659215,0.0001397431,0.009483632,0.013329231,0.97299236],"genre_scores_gemma":[0.0021223552,0.0003314,0.0009684031,0.00023606856,0.00017899236,0.00008193633,0.007004427,0.009449359,0.979627],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99978954,0.00001409635,0.0000068716577,0.0000368188,0.000100040925,0.000052667412],"domain_scores_gemma":[0.99937123,0.000060364553,0.00001694118,0.00011224449,0.0002169584,0.00022234947],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00025186138,0.0011982636,0.00059677055,0.0010577182,0.0012999944,0.0036668375,0.0012016727,0.0012272432,0.9410132],"category_scores_gemma":[0.0009846592,0.00056189793,0.0007416607,0.0008398832,0.00027612236,0.002561537,0.0028783302,0.0013260994,0.90772086],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006371063,0.000018916598,0.000057456848,0.0001307306,0.000002220327,0.000039817947,0.000053158663,0.00003635624,0.00094933773,0.00090534147,0.9615462,0.03619681],"study_design_scores_gemma":[0.000008105633,0.0000089775185,0.0002602876,0.000029946534,0.0000014969626,0.000045469766,0.000025860496,0.000030166848,0.00029605482,0.00015506534,0.9991333,0.000005393171],"about_ca_topic_score_codex":0.0030836908,"about_ca_topic_score_gemma":0.008084135,"teacher_disagreement_score":0.058986783,"about_ca_system_score_codex":0.000632352,"about_ca_system_score_gemma":0.00044406744,"threshold_uncertainty_score":0.08413738},"labels":[],"label_agreement":null},{"id":"W6931227660","doi":"10.5281/zenodo.3867326","title":"Sardoblaniulus annae Manfredi 1956","year":2017,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Research (Canada)","funders":"","keywords":"Habitat; Distribution (mathematics); Vegetation (pathology); Natural (archaeology)","score_opus":0.03199165943208378,"score_gpt":0.2514038981088926,"score_spread":0.2194122386768088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931227660","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2462491,0.016736383,0.0023675507,0.0006275557,0.0007225381,0.00036033607,0.0038367838,0.00047600895,0.72862375],"genre_scores_gemma":[0.9320749,0.0031381072,0.0020588415,0.00029887038,0.00023319753,0.0001147689,0.0034248198,0.000027475038,0.058628935],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99985325,0.000012379543,0.000007731362,0.000048363523,0.000039697057,0.00003848738],"domain_scores_gemma":[0.99982303,0.00003086938,0.000058943042,0.000013535002,0.000050105282,0.00002353459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010390463,0.000538771,0.0002345447,0.0011919746,0.0017784609,0.0003010239,0.0005067156,0.00054811605,0.018925114],"category_scores_gemma":[0.00022402706,0.00026076805,0.00018422636,0.00050229765,0.0005875984,0.00044330783,0.000534673,0.00037418728,0.007407938],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069786905,0.00017783132,0.06849676,0.0011717441,0.000055223598,0.0029693935,0.0032018353,0.0006918043,0.0630179,0.0115661165,0.04206346,0.8058901],"study_design_scores_gemma":[0.000050720526,0.00032625734,0.3045119,0.00036644508,0.000042598287,0.0035464298,0.000924424,0.00024128832,0.003298758,0.0011253866,0.6855385,0.000027341795],"about_ca_topic_score_codex":0.013817829,"about_ca_topic_score_gemma":0.027735813,"teacher_disagreement_score":0.018925114,"about_ca_system_score_codex":0.0008297912,"about_ca_system_score_gemma":0.00041081544,"threshold_uncertainty_score":0.06331074},"labels":[],"label_agreement":null},{"id":"W6931259267","doi":"10.5281/zenodo.5043249","title":"pysal/spreg: Release v1.2.3","year":2021,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Tellabs (Canada)","funders":"","keywords":"Regression analysis; Regression; Linear regression; Python (programming language)","score_opus":0.02129441487630768,"score_gpt":0.23175359150228955,"score_spread":0.21045917662598188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931259267","genre_codex":"software","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":"software","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015587959,0.0002838317,0.20422941,0.00036554268,0.00018631949,0.00009501841,0.08822944,0.6939575,0.011094142],"genre_scores_gemma":[0.036916092,0.0006678077,0.20035389,0.0007055709,0.00020174886,0.00075366726,0.17036097,0.5523232,0.037717033],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99924314,0.00015105323,0.00007130039,0.00016160241,0.00024180446,0.00013104534],"domain_scores_gemma":[0.9979977,0.001002099,0.00012058232,0.00045100474,0.0003121288,0.000116333955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017202818,0.0022946706,0.0018029045,0.001558464,0.00048759187,0.0025647385,0.0032104251,0.0011861931,0.21722169],"category_scores_gemma":[0.008274286,0.0022045192,0.0023503844,0.0017172244,0.00067324436,0.002066539,0.0027631237,0.0023951968,0.18586022],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023788598,0.00009374936,0.0024408123,0.0010123252,0.00031321245,0.00023149303,0.00015832167,0.017231336,0.0017163092,0.013002071,0.8979716,0.06559094],"study_design_scores_gemma":[0.0006310861,0.00005320888,0.003608392,0.00035475972,0.0001295576,0.0003728735,0.00008046962,0.16372027,0.0078641465,0.057229824,0.76572156,0.0002338036],"about_ca_topic_score_codex":0.008303715,"about_ca_topic_score_gemma":0.0093649095,"teacher_disagreement_score":0.21722169,"about_ca_system_score_codex":0.00062679517,"about_ca_system_score_gemma":0.0015202558,"threshold_uncertainty_score":0.72667897},"labels":[],"label_agreement":null},{"id":"W6931305457","doi":"10.5281/zenodo.4818242","title":"Spinatrypa mariaetheresiae Halamski 2013, n. sp.","year":2013,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Outcrop; Sensu; Paleozoic; Honour","score_opus":0.016985191424184712,"score_gpt":0.21702355698104936,"score_spread":0.20003836555686466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931305457","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63035166,0.020403905,0.0043196054,0.00062844047,0.00042108,0.0007328329,0.0047468715,0.0005156556,0.3378799],"genre_scores_gemma":[0.96358335,0.0037794244,0.0030755764,0.0002578227,0.00007506118,0.00019035602,0.0016183724,0.000031540472,0.027388453],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99989593,0.000007411609,0.000014223362,0.000041778363,0.00002532587,0.000015436457],"domain_scores_gemma":[0.999915,0.000010897072,0.00003731217,0.000007500119,0.000018895404,0.00001037306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011774987,0.0005148329,0.0003320068,0.0016792165,0.0013015777,0.00045311078,0.00047923074,0.00034652985,0.012541955],"category_scores_gemma":[0.0003470307,0.00040955967,0.00019940184,0.00085141585,0.0005619212,0.0010607394,0.0010415706,0.00042933045,0.0035127548],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008273799,0.00017898345,0.071387485,0.0018058852,0.00024296451,0.0039019424,0.0053381897,0.000569364,0.044227976,0.003336701,0.020215321,0.8479678],"study_design_scores_gemma":[0.0001681137,0.00025046527,0.69018877,0.00090218626,0.00032317577,0.008129114,0.0035439378,0.00046400022,0.0028337145,0.0013902966,0.29175878,0.000047537364],"about_ca_topic_score_codex":0.010318615,"about_ca_topic_score_gemma":0.03837127,"teacher_disagreement_score":0.012541955,"about_ca_system_score_codex":0.00049944385,"about_ca_system_score_gemma":0.00041988518,"threshold_uncertainty_score":0.04195702},"labels":[],"label_agreement":null},{"id":"W6931365800","doi":"10.5281/zenodo.2529833","title":"CamDavidsonPilon/lifelines: v0.16.0","year":2019,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bell (Canada)","funders":"","keywords":"Decimal; Python (programming language); Pairwise comparison; Software; Residual","score_opus":0.020645020785906763,"score_gpt":0.23306016863274837,"score_spread":0.2124151478468416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931365800","genre_codex":"software","genre_gemma":"software","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"software","genre_consensus":"software","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039180196,0.00024872762,0.040973596,0.00031654665,0.0004150676,0.00018100083,0.0639848,0.88124824,0.012240228],"genre_scores_gemma":[0.0030614375,0.0003248854,0.028258236,0.0011108113,0.00011101461,0.0011012472,0.07193093,0.8682698,0.025831645],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975883,0.00031549067,0.00022965179,0.0006229235,0.00086835073,0.00037532393],"domain_scores_gemma":[0.9941071,0.0015307303,0.00042787887,0.0015753555,0.0017806281,0.0005781366],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0052867304,0.004888058,0.0033061015,0.00318686,0.0018251349,0.006679297,0.0084220795,0.0029514553,0.52221775],"category_scores_gemma":[0.01655175,0.005700621,0.0042683478,0.0025070345,0.0015394643,0.006169784,0.008012187,0.0063714534,0.6015428],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015284211,0.000037695845,0.00071404374,0.0009060187,0.00006709816,0.000085576954,0.0001732128,0.0005013957,0.0010245704,0.0023986944,0.97177863,0.02216023],"study_design_scores_gemma":[0.00017734393,0.000047898324,0.001511524,0.00043103783,0.00005354488,0.00019057443,0.0000578606,0.0027995375,0.007198809,0.010535979,0.9768082,0.00018757726],"about_ca_topic_score_codex":0.0056255716,"about_ca_topic_score_gemma":0.0053480426,"teacher_disagreement_score":0.47778225,"about_ca_system_score_codex":0.0021913897,"about_ca_system_score_gemma":0.004037761,"threshold_uncertainty_score":0.6814984},"labels":[],"label_agreement":null},{"id":"W6931365870","doi":"10.5281/zenodo.4494452","title":"Udalia primaeva Whalen & Carter in Carter, Whalen & Guex 1998","year":2020,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Field (mathematics); State (computer science); Theme (computing); Order (exchange); Context (archaeology)","score_opus":0.029439798689813983,"score_gpt":0.22681050238500425,"score_spread":0.19737070369519027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931365870","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.052664917,0.083212614,0.0085813375,0.0071102954,0.010338051,0.0009204092,0.0039650085,0.0012774545,0.8319298],"genre_scores_gemma":[0.4651269,0.025399935,0.010441009,0.004452713,0.0033916363,0.0005706901,0.0025693292,0.00077560835,0.48727214],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99967587,0.000062805884,0.000025871776,0.000116542695,0.00007512903,0.000043874395],"domain_scores_gemma":[0.9997048,0.000059120375,0.00010369549,0.000039970277,0.00006070724,0.000031703883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023864249,0.0006763396,0.00040138268,0.001913324,0.0031302331,0.0013590779,0.0010044259,0.0014418853,0.040146925],"category_scores_gemma":[0.00086742704,0.00033676284,0.00021663327,0.00089843356,0.0017301034,0.0018121455,0.0023045496,0.0010979589,0.015116161],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032502104,0.0000809889,0.008241652,0.0013206085,0.00003694335,0.0023878848,0.007361224,0.0003395788,0.006045844,0.033395313,0.24431735,0.6961476],"study_design_scores_gemma":[0.000005319876,0.0000132588675,0.0055155214,0.00019289707,0.000007085328,0.0007930796,0.0005189539,0.000035348618,0.0004252448,0.00054924755,0.9919384,0.0000055236924],"about_ca_topic_score_codex":0.017972488,"about_ca_topic_score_gemma":0.030409317,"teacher_disagreement_score":0.040146925,"about_ca_system_score_codex":0.0010254005,"about_ca_system_score_gemma":0.0007333723,"threshold_uncertainty_score":0.13430482},"labels":[],"label_agreement":null},{"id":"W6931448480","doi":"10.5281/zenodo.3560306","title":"Reproducibility Package for \"Smartphone apps for the treatment of mental disorders: a systematic review\" (Final version)","year":2019,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Software; Code (set theory); Software package; Measure (data warehouse); Reproducibility; Table (database)","score_opus":0.025768730908978566,"score_gpt":0.2502882505559393,"score_spread":0.2245195196469607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931448480","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":"reproducibility","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":"reproducibility","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017655903,0.002724202,0.050403174,0.0044248663,0.0029786737,0.055145185,0.842574,0.031881787,0.008102552],"genre_scores_gemma":[0.014260063,0.0024422454,0.18260251,0.0022184283,0.00060975336,0.6865732,0.08054685,0.012546887,0.01819995],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9521691,0.020116609,0.015601183,0.0059059355,0.0050462987,0.0011609137],"domain_scores_gemma":[0.7562502,0.18088825,0.016207194,0.024640217,0.020705331,0.0013088455],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.05175979,0.003597029,0.009034967,0.01154862,0.0017356614,0.0064935707,0.0033116261,0.003464887,0.4435294],"category_scores_gemma":[0.31107205,0.0042193225,0.01845864,0.015645301,0.002043007,0.004079585,0.005450686,0.0045822086,0.06705235],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0025257876,0.000097094824,0.0012327693,0.34214395,0.009273751,0.00020132266,0.0009017782,0.0012299509,0.0013132902,0.00823621,0.5935606,0.03928345],"study_design_scores_gemma":[0.021161648,0.0006114325,0.014278563,0.07614434,0.015742369,0.00051873113,0.0007138873,0.0035278578,0.0040721754,0.043790575,0.81826794,0.0011704428],"about_ca_topic_score_codex":0.0037880298,"about_ca_topic_score_gemma":0.00709574,"teacher_disagreement_score":0.9482402,"about_ca_system_score_codex":0.0031381007,"about_ca_system_score_gemma":0.01938354,"threshold_uncertainty_score":0.79373777},"labels":[],"label_agreement":null},{"id":"W6931565692","doi":"10.5281/zenodo.7747046","title":"Diporodrilidae Bouche 1970","year":2023,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"","keywords":"Subspecies; Mediterranean Islands; Lumbricidae; Mediterranean climate; Sister","score_opus":0.029314089052653133,"score_gpt":0.2420858741475802,"score_spread":0.21277178509492706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931565692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6113042,0.060241822,0.017541153,0.0010187109,0.0010975151,0.0007552533,0.0055328202,0.001795313,0.30071318],"genre_scores_gemma":[0.93504226,0.009859178,0.010293097,0.000731207,0.00021444762,0.00019543078,0.0037082848,0.000046679772,0.039909378],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99988866,0.000008602672,0.000007269714,0.0000364701,0.00002389565,0.000035107118],"domain_scores_gemma":[0.9999149,0.000010661281,0.00002692271,0.000005876746,0.000023386796,0.000018309493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009995423,0.00044336446,0.00022841389,0.0014077834,0.0006677741,0.000372632,0.00030477915,0.00035450546,0.00914214],"category_scores_gemma":[0.00022778187,0.000156013,0.00012021096,0.00054472056,0.00028412355,0.0003770677,0.0004635425,0.0004338887,0.0027700802],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004892087,0.00013322262,0.044907663,0.00079274253,0.000038914313,0.0006970874,0.0010059198,0.0005549067,0.08670525,0.008154446,0.019764695,0.83675593],"study_design_scores_gemma":[0.00009045305,0.00042154052,0.3759942,0.0004557942,0.0000512034,0.0050708004,0.00053895573,0.0010084842,0.0040888838,0.0017974213,0.6104418,0.000040473213],"about_ca_topic_score_codex":0.010483559,"about_ca_topic_score_gemma":0.013585281,"teacher_disagreement_score":0.010483559,"about_ca_system_score_codex":0.0005613495,"about_ca_system_score_gemma":0.00029341257,"threshold_uncertainty_score":0.0305835},"labels":[],"label_agreement":null},{"id":"W6931648056","doi":"10.5683/sp3/pdkkyw","title":"Introduction to the Portage Network","year":2017,"lang":"en","type":"dataset","venue":"Borealis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Terminal (telecommunication); Scope (computer science); Work (physics); Component (thermodynamics); Troubleshooting","score_opus":0.00953522813072507,"score_gpt":0.25442889672606156,"score_spread":0.24489366859533648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931648056","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047776266,0.0009946268,0.0003445813,0.00064231374,0.00020309647,0.000040968924,0.993622,0.001746551,0.0019280929],"genre_scores_gemma":[0.0010648207,0.00049732986,0.0006926407,0.00028465036,0.00008095988,0.00014675297,0.9957021,0.00025222977,0.0012786553],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99814534,0.0004556423,0.00021351431,0.0004463945,0.00052511116,0.00021406807],"domain_scores_gemma":[0.99680674,0.0010013332,0.0003353635,0.00069887395,0.0006305331,0.00052723667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019664078,0.0024964155,0.0016304206,0.005075397,0.00077987235,0.0035599861,0.0025336165,0.0019059343,0.050140243],"category_scores_gemma":[0.011682131,0.00066864816,0.0017005338,0.0073631206,0.0005415954,0.002423905,0.0027062292,0.0025377797,0.064539924],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007829088,0.000023852403,0.0010591674,0.00045154375,0.00004530662,0.000019995756,0.000011592671,0.00042775998,0.000053690583,0.00040608738,0.9924297,0.004992989],"study_design_scores_gemma":[0.00021375174,0.000041732368,0.0038780025,0.00043451943,0.000056306926,0.00011686465,0.00005173355,0.001027287,0.0002140063,0.0027786684,0.99115,0.0000370349],"about_ca_topic_score_codex":0.015989665,"about_ca_topic_score_gemma":0.02793868,"teacher_disagreement_score":0.050140243,"about_ca_system_score_codex":0.0013423414,"about_ca_system_score_gemma":0.0022450853,"threshold_uncertainty_score":0.16773582},"labels":[],"label_agreement":null},{"id":"W6931756900","doi":"10.5683/sp3/0ffgwu","title":"General Social Survey, Cycle 24, 2010 [Canada]: Time-Stress and Well-Being, Episode File [version 5]","year":2011,"lang":"en","type":"dataset","venue":"Borealis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Statistics Canada","funders":"","keywords":"General Social Survey; Variety (cybernetics); Time-use survey; Survey data collection; Work (physics); Order (exchange); Time budget","score_opus":0.0074352478172963424,"score_gpt":0.20781130087661046,"score_spread":0.2003760530593141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931756900","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014932457,0.00012757098,0.00019849975,0.00019235972,0.00007141916,0.0011105674,0.990119,0.00015195922,0.006535395],"genre_scores_gemma":[0.008918572,0.0008311366,0.0029104855,0.0005127007,0.000045352877,0.0048032403,0.96408993,0.00019195992,0.017696762],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99770916,0.00023159717,0.0003309712,0.00021301677,0.0010940612,0.00042106386],"domain_scores_gemma":[0.9870193,0.00040882023,0.00048600207,0.0004316495,0.010932414,0.00072189065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029918684,0.001118632,0.0016136596,0.0033184956,0.0028902076,0.0024750612,0.002459317,0.00084901706,0.06568066],"category_scores_gemma":[0.011530726,0.0012798931,0.0013216994,0.0136461705,0.0003922087,0.0015092833,0.0012121034,0.0019245197,0.023602007],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015904118,0.00011108997,0.011823746,0.000833963,0.000039717474,0.000025364552,0.00026936448,0.00021506722,0.000098978904,0.00051210815,0.9739469,0.011964615],"study_design_scores_gemma":[0.00036191713,0.0001008686,0.52925146,0.0007749815,0.00006992464,0.00005317952,0.0011980163,0.0004702106,0.00022943875,0.0003977455,0.4669772,0.000115103205],"about_ca_topic_score_codex":0.9675537,"about_ca_topic_score_gemma":0.9781843,"teacher_disagreement_score":0.06568066,"about_ca_system_score_codex":0.027831946,"about_ca_system_score_gemma":0.048048124,"threshold_uncertainty_score":0.2197237},"labels":[],"label_agreement":null},{"id":"W6931776799","doi":"10.5683/sp3/cile8k","title":"Razorback Mountain (West) British Columbia. 1:50,000. Map Sheet 092N10, ed. 1, 1967","year":2022,"lang":"en","type":"dataset","venue":"Borealis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Georeference; General partnership; Raster graphics; Natural (archaeology); Aerial photography; Geographic information system; Topographic map (neuroanatomy); Viewshed analysis; Orthophoto","score_opus":0.007601964458113421,"score_gpt":0.22470782930738137,"score_spread":0.21710586484926794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931776799","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009902517,0.0000886606,0.000021205717,0.000029555436,0.000015185366,0.0000043468563,0.99739826,0.00009834671,0.0022454893],"genre_scores_gemma":[0.00088568655,0.00025012487,0.00016685728,0.000026083822,0.0000063150073,0.000038202117,0.989542,0.00008271386,0.009001981],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995455,0.000024576995,0.00003927041,0.00012467356,0.00014663038,0.000119256394],"domain_scores_gemma":[0.9983815,0.00009930598,0.00010896418,0.00017311095,0.00105909,0.00017788296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003501492,0.0016522259,0.0012575968,0.0044036005,0.0014828814,0.0037389707,0.0015298285,0.0006381195,0.12321382],"category_scores_gemma":[0.0024754333,0.0007776691,0.00051163795,0.02010995,0.000373401,0.0009310534,0.00096787314,0.0012963753,0.103446275],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017852346,0.0000033864665,0.0006820556,0.00021634997,0.000008448467,0.0000137048755,0.000022314816,0.00006506166,0.000023961546,0.00017314304,0.99547535,0.00329824],"study_design_scores_gemma":[0.000029834895,0.0000022941435,0.010856206,0.00026988267,0.000010923224,0.000020218398,0.00016691125,0.00009379272,0.00009711579,0.00020132306,0.98823416,0.000017361148],"about_ca_topic_score_codex":0.91683227,"about_ca_topic_score_gemma":0.9507902,"teacher_disagreement_score":0.12321382,"about_ca_system_score_codex":0.00633389,"about_ca_system_score_gemma":0.013088051,"threshold_uncertainty_score":0.41219133},"labels":[],"label_agreement":null},{"id":"W6931949295","doi":"10.5683/sp3/jhkjcs","title":"Circle of Nations House","year":2024,"lang":"en","type":"dataset","venue":"Borealis","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Sustainability; Placemaking; Work (physics); Architectural design; Documentation","score_opus":0.009634669143667396,"score_gpt":0.2488010990713383,"score_spread":0.2391664299276709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931949295","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011219455,0.00004754156,0.00006251884,0.000035031117,0.00002832068,0.000005720391,0.9972932,0.00022068992,0.0021947983],"genre_scores_gemma":[0.0004196542,0.0000683306,0.00019899405,0.000032596017,0.000008804495,0.000031713585,0.9967488,0.00010511591,0.0023859513],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991411,0.00010894253,0.00009596894,0.00028697986,0.00022138262,0.00014547954],"domain_scores_gemma":[0.99783903,0.00043480145,0.00025571213,0.0005785657,0.00063241005,0.0002594422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068112864,0.001261187,0.0010354167,0.0030591341,0.000685952,0.0029001366,0.0014399977,0.000887626,0.115256906],"category_scores_gemma":[0.005117112,0.00055246183,0.000670494,0.006993516,0.00026538942,0.001319127,0.0015231196,0.001286608,0.16918871],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036413207,0.000008170169,0.0010749988,0.00019383823,0.000009268456,0.0000122234915,0.000018146824,0.00010440804,0.00004228528,0.0006525792,0.9945562,0.0032915575],"study_design_scores_gemma":[0.000023486962,0.000004540398,0.002781598,0.00012648408,0.000006091563,0.000018276527,0.000043752807,0.000083478895,0.000091021684,0.0004802516,0.99633336,0.000007699165],"about_ca_topic_score_codex":0.03141778,"about_ca_topic_score_gemma":0.049175885,"teacher_disagreement_score":0.115256906,"about_ca_system_score_codex":0.00090637227,"about_ca_system_score_gemma":0.002192658,"threshold_uncertainty_score":0.38557273},"labels":[],"label_agreement":null},{"id":"W6932029079","doi":"10.5281/zenodo.6533508","title":"Pepsis completa Smith 1855","year":2022,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Willow Biosciences (Canada)","funders":"","keywords":"Spider; Base (topology); Natural (archaeology)","score_opus":0.029596018751973967,"score_gpt":0.22696681055820758,"score_spread":0.19737079180623363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6932029079","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16916578,0.018937461,0.0047661923,0.0015058478,0.0012690817,0.0008801183,0.0058628377,0.00084061,0.7967721],"genre_scores_gemma":[0.89660203,0.006891713,0.004658501,0.00104184,0.00047306644,0.00025176944,0.0029101796,0.000071500515,0.08709928],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9998191,0.00001866653,0.000012751945,0.00007408676,0.000054234108,0.000021226375],"domain_scores_gemma":[0.99986506,0.000033100776,0.000043007098,0.000010022176,0.000031895794,0.000016776832],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011963462,0.0008632158,0.0003559727,0.001991519,0.0024553405,0.0005899708,0.0004726458,0.00081707473,0.047043446],"category_scores_gemma":[0.0004796121,0.00027960414,0.00014545991,0.00096571125,0.0008144213,0.0011928435,0.0011557065,0.00071045605,0.009320758],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027013267,0.00014839435,0.018516712,0.0012200726,0.00005726838,0.0043970663,0.0035546387,0.00069934176,0.021005485,0.012019025,0.050523512,0.88758844],"study_design_scores_gemma":[0.00005817416,0.00025003517,0.107165106,0.00048753095,0.00006634573,0.008194925,0.0018456499,0.00038685562,0.0023377007,0.0021375967,0.87704515,0.000024999212],"about_ca_topic_score_codex":0.008744806,"about_ca_topic_score_gemma":0.017404338,"teacher_disagreement_score":0.047043446,"about_ca_system_score_codex":0.0006461623,"about_ca_system_score_gemma":0.00048422324,"threshold_uncertainty_score":0.15737599},"labels":[],"label_agreement":null},{"id":"W6932110043","doi":"10.5405190/foo.bar","title":"DOWNLOAD [epub]] The Viscount Who Loved Me (Bridgertons, #2) By Julia Quinn pdf Download","year":2024,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Download; Popularity; Plot (graphics); Canadian literature; The Internet; Performance art; Web site","score_opus":0.011568395816715503,"score_gpt":0.2227601651826409,"score_spread":0.2111917693659254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6932110043","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00086727215,0.0013492705,0.00054276874,0.001746716,0.0028251407,0.00005207671,0.0008412237,0.0008130541,0.99096245],"genre_scores_gemma":[0.0032967022,0.0007268647,0.0003178263,0.0005787617,0.0002346237,0.000022337863,0.00041892007,0.0008099919,0.993594],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998272,0.000017773302,0.0000047280328,0.00002807133,0.00010286374,0.000019318255],"domain_scores_gemma":[0.99971217,0.00004731357,0.00001901602,0.000029887455,0.000115600036,0.000075951226],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018580329,0.00049195887,0.00029797154,0.0005685171,0.0016713891,0.0039477367,0.00065049564,0.00086224044,0.6151456],"category_scores_gemma":[0.0012795574,0.0002672399,0.00028245547,0.00060033746,0.00048383613,0.0025878982,0.0022912126,0.0017536067,0.4355422],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011454639,0.000010134745,0.00006925802,0.00009109215,0.0000016375583,0.00016610223,0.00036802783,0.000015510914,0.00028837702,0.0027186833,0.9643977,0.03186209],"study_design_scores_gemma":[0.0000020788923,0.000006681301,0.00036571966,0.00005759831,7.845683e-7,0.0001672474,0.00020247902,0.0000161095,0.00010005655,0.00020013074,0.9988772,0.0000039909833],"about_ca_topic_score_codex":0.002601089,"about_ca_topic_score_gemma":0.007910041,"teacher_disagreement_score":0.38485438,"about_ca_system_score_codex":0.00067616306,"about_ca_system_score_gemma":0.00048412333,"threshold_uncertainty_score":0.54894805},"labels":[],"label_agreement":null},{"id":"W6939142870","doi":"10.60692/ncqk6-ysq57","title":"Toll-like receptor 9 (-1237 T/C, -1486 T/C) and the risk of gastric cancer: a meta-analysis of genetic association studies","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Odds ratio; Confidence interval; Etiology; Genetic association; Cancer; Genotype; Ethnic group; Meta-analysis","score_opus":0.04397331965950292,"score_gpt":0.2441206535067944,"score_spread":0.2001473338472915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939142870","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030194633,0.96122116,0.0050069895,0.00065023964,0.00046381357,0.0006996133,0.0012150931,0.00010972307,0.00043868326],"genre_scores_gemma":[0.6319269,0.34722713,0.013338428,0.0012589779,0.00054138334,0.0026457638,0.0021715981,0.0001254502,0.0007643825],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.97989,0.011671517,0.0039743315,0.0023985791,0.0015423925,0.00052321726],"domain_scores_gemma":[0.9783844,0.016022233,0.002402234,0.0012488563,0.0015479875,0.00039431403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.02461638,0.0042043454,0.017821074,0.0087067,0.0011212218,0.004563925,0.002934243,0.0027193541,0.0030528784],"category_scores_gemma":[0.036907617,0.002110745,0.06995772,0.010161132,0.0008472052,0.0019390122,0.0022917597,0.0025966712,0.00033505453],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020970048,0.00003383198,0.0084630195,0.035936896,0.9486326,0.0001556007,0.000046346897,0.00073870516,0.00029166063,0.00008092175,0.00026413548,0.0032592267],"study_design_scores_gemma":[0.00032390805,0.00011336644,0.0029037492,0.0017971756,0.99383885,0.000058633737,0.000022564742,0.00034267313,0.000084719315,0.00015916202,0.00034139675,0.000013925658],"about_ca_topic_score_codex":0.0063830265,"about_ca_topic_score_gemma":0.009689415,"teacher_disagreement_score":0.02461638,"about_ca_system_score_codex":0.002415882,"about_ca_system_score_gemma":0.0033969192,"threshold_uncertainty_score":0.13018537},"labels":[],"label_agreement":null},{"id":"W6939512661","doi":"10.6084/m9.figshare.12032982","title":"Additional file 1 of Sustained exposure to systemic endotoxin triggers chemokine induction in the brain followed by a rapid influx of leukocytes","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Medical Research Council","keywords":"Chemokine; Flow cytometry; Bone marrow; Monocyte; Cytokine; Myeloid cells; CCL2; Myelopoiesis","score_opus":0.014873460691353122,"score_gpt":0.21088354095256265,"score_spread":0.19601008026120953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6939512661","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026060134,0.000027376489,0.0004894038,0.00009410296,0.000042156385,0.00013712219,0.9975454,0.0006139997,0.00078977336],"genre_scores_gemma":[0.010552488,0.00027804528,0.00820306,0.00069721945,0.00013194453,0.004704253,0.9639398,0.0017050524,0.00978817],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991007,0.00008311898,0.00012299369,0.00023111473,0.00029070838,0.00017131932],"domain_scores_gemma":[0.9893086,0.0072309836,0.00078847696,0.00071588554,0.0013499224,0.00060607516],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017827402,0.0020160214,0.0023681,0.002386862,0.0018450471,0.00249977,0.003088203,0.001864453,0.9206191],"category_scores_gemma":[0.017681431,0.00096658577,0.0011545555,0.003742667,0.000523909,0.0023580717,0.0015125141,0.0015900552,0.2348586],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011890173,0.00036119294,0.0030612971,0.0083779935,0.00009148637,0.0003112698,0.00016053203,0.0007779226,0.0017360507,0.0010858634,0.96987647,0.012970843],"study_design_scores_gemma":[0.01360666,0.0015430677,0.043224145,0.008853701,0.00044319153,0.002372205,0.0010569661,0.0058185584,0.008834728,0.015650248,0.89806455,0.00053211953],"about_ca_topic_score_codex":0.0066624843,"about_ca_topic_score_gemma":0.012502621,"teacher_disagreement_score":0.9206191,"about_ca_system_score_codex":0.0011660508,"about_ca_system_score_gemma":0.0030522456,"threshold_uncertainty_score":0.11322725},"labels":[],"label_agreement":null},{"id":"W6957811949","doi":"10.60692/tkgaf-28a37","title":"Inhibition of IL-12 heterodimers impairs TLR9-mediated prevention of early mouse plasmacytoma cell growth","year":2023,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Immunosurveillance; Innate immune system; Cytotoxic T cell; Innate lymphoid cell; Cancer cell; TLR3; Cancer; Receptor","score_opus":0.01645892984985296,"score_gpt":0.19698872929802064,"score_spread":0.1805297994481677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6957811949","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9917808,0.0016629027,0.0030496542,0.00017615336,0.000071205584,0.00004530261,0.0005741078,0.00021455645,0.0024254036],"genre_scores_gemma":[0.9920128,0.00074549776,0.0018089701,0.00007265212,0.000016363501,0.0000865498,0.0006388953,0.000027347318,0.0045908713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962115,0.00009971263,0.000038591785,0.00005629119,0.000088350105,0.0000959152],"domain_scores_gemma":[0.99980944,0.000031226402,0.00005289341,0.000028090595,0.000013859026,0.00006457366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024409988,0.0004937582,0.0002376192,0.00023743282,0.00010127285,0.00021066723,0.00025279025,0.00037011286,0.002481814],"category_scores_gemma":[0.00012358911,0.00013775994,0.00020900143,0.00009802973,0.00017700707,0.00017184726,0.00018747468,0.0010018807,0.0008744964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025986822,0.00013123681,0.00007858106,0.000030257728,0.00000382019,0.000027441023,0.000009342537,0.00005300161,0.9984353,0.000083142324,0.00005732131,0.0008307472],"study_design_scores_gemma":[0.000032602835,0.0005418041,0.0014108112,0.0000053481644,0.00000793825,0.00009689231,0.000009041572,0.000705525,0.9955018,0.000027541115,0.0016582472,0.0000023694704],"about_ca_topic_score_codex":0.00030853128,"about_ca_topic_score_gemma":0.00038009576,"teacher_disagreement_score":0.002481814,"about_ca_system_score_codex":0.00019658223,"about_ca_system_score_gemma":0.00017398653,"threshold_uncertainty_score":0.00830251},"labels":[],"label_agreement":null},{"id":"W6958471225","doi":"10.6084/m9.figshare.14121487","title":"Additional file 1 of Lack of CD34 delays bacterial endotoxin-induced lung inflammation","year":2021,"lang":"en","type":"article","venue":"Open MIND","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Cytokine; Lung; Inflammation; Table (database); Lung disease","score_opus":0.03491130702731761,"score_gpt":0.28452170075438543,"score_spread":0.24961039372706784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958471225","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004228056,0.00006941977,0.0011875253,0.00013875078,0.000065419525,0.000214459,0.9958417,0.0007428194,0.001317151],"genre_scores_gemma":[0.020000111,0.00053972873,0.014924944,0.0012088052,0.00019084735,0.0068351133,0.9312591,0.0025241596,0.022517148],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992136,0.00011193722,0.00009702661,0.00019207533,0.00027135623,0.00011400715],"domain_scores_gemma":[0.987566,0.009029795,0.00075996266,0.00078024046,0.0014100547,0.00045401303],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018138497,0.0013421056,0.0016274119,0.001898262,0.0010839062,0.0013989967,0.0018092815,0.0012812226,0.88787484],"category_scores_gemma":[0.014625013,0.0006994835,0.00094283605,0.0026561893,0.00039892455,0.0012324665,0.0008202842,0.0013518687,0.1476238],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011505141,0.000526637,0.0020709692,0.0061831544,0.00010001523,0.0001391732,0.000099404184,0.0009314762,0.0022907683,0.0011735747,0.9662393,0.019094981],"study_design_scores_gemma":[0.013620511,0.0025023133,0.04241604,0.0065348684,0.000567158,0.0018936826,0.00075903675,0.006353234,0.013366082,0.01948502,0.8920594,0.00044264682],"about_ca_topic_score_codex":0.004137301,"about_ca_topic_score_gemma":0.0076903505,"teacher_disagreement_score":0.88787484,"about_ca_system_score_codex":0.0010012491,"about_ca_system_score_gemma":0.0019283107,"threshold_uncertainty_score":0.15993285},"labels":[],"label_agreement":null},{"id":"W6958906849","doi":"10.6084/m9.figshare.4456568.v2","title":"Additional file 1 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; MEDLINE; Systemic inflammatory response syndrome; Inflammation; Disease","score_opus":0.020577387859050653,"score_gpt":0.2755605887891766,"score_spread":0.25498320093012594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958906849","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017811437,0.0017877592,0.00021249805,0.0005068019,0.000110243695,0.00083319977,0.9943764,0.00015615442,0.0018387727],"genre_scores_gemma":[0.013146149,0.02266208,0.013661829,0.004619607,0.00077479734,0.030451095,0.87386286,0.00097112934,0.039850492],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9984201,0.00031895275,0.0006410961,0.00023348596,0.00023397678,0.00015239656],"domain_scores_gemma":[0.95528316,0.036596976,0.003022685,0.00053592114,0.0041080844,0.00045320325],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004144661,0.002025637,0.0031677855,0.012235453,0.0009070124,0.0027535537,0.0022919835,0.001876473,0.79496115],"category_scores_gemma":[0.043046687,0.0010835836,0.004182931,0.015156181,0.0005245428,0.0038273006,0.0022879057,0.0013130171,0.056709114],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006809665,0.000051673673,0.00092926394,0.5125166,0.00056212617,0.0001522521,0.00025463264,0.00038991167,0.00023208612,0.0013060169,0.4628842,0.020040117],"study_design_scores_gemma":[0.004678626,0.00028845228,0.013026112,0.31900734,0.0039963317,0.00067287864,0.00084964174,0.00053847034,0.0005685265,0.00507158,0.65112406,0.00017797113],"about_ca_topic_score_codex":0.0134027265,"about_ca_topic_score_gemma":0.025296703,"teacher_disagreement_score":0.79496115,"about_ca_system_score_codex":0.0027031205,"about_ca_system_score_gemma":0.0067284238,"threshold_uncertainty_score":0.292463},"labels":[],"label_agreement":null},{"id":"W6976025171","doi":"10.60692/qg4eb-nj135","title":"Potential mediators of in ovo delivered double stranded (ds) RNA-induced innate response against low pathogenic avian influenza virus infection","year":2018,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Calgary","funders":"","keywords":"In ovo; TLR3; Interferon; Innate immune system; RNA silencing; Virus; Influenza A virus subtype H5N1; Interferon type I; Macrophage","score_opus":0.016789019465094864,"score_gpt":0.2232258006999267,"score_spread":0.20643678123483183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976025171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926628,0.0032646826,0.0020357259,0.00014908951,0.00011155273,0.00008698993,0.0003351994,0.000028202201,0.0013256617],"genre_scores_gemma":[0.992067,0.0020210089,0.0020951342,0.00020741404,0.000037075493,0.00013844717,0.00044563695,0.000013849451,0.0029744226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989045,0.00001850486,0.000008320392,0.000023892686,0.000022013639,0.000036751786],"domain_scores_gemma":[0.99988997,0.000023610895,0.00004407505,0.000006247213,0.000013411423,0.000022538226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014815896,0.000266772,0.0002542924,0.0001438851,0.00010249475,0.0002903371,0.00013252774,0.00037214014,0.0011173998],"category_scores_gemma":[0.00014627582,0.00009433551,0.00022699576,0.000046987505,0.00022330647,0.00020285384,0.00018134217,0.0004995205,0.00020068437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028160043,0.000040510706,0.00027778908,0.00011235892,0.0000035054563,0.00007992402,0.000024975496,0.000018870263,0.99811053,0.000034714314,0.000025261874,0.0009899695],"study_design_scores_gemma":[0.000061746,0.0030217755,0.015763946,0.00004799712,0.00005326616,0.00046751142,0.00028030522,0.00045731675,0.9758246,0.000093082206,0.0039195577,0.00000895814],"about_ca_topic_score_codex":0.00013996,"about_ca_topic_score_gemma":0.00023161682,"teacher_disagreement_score":0.0011173998,"about_ca_system_score_codex":0.00013061888,"about_ca_system_score_gemma":0.0001332264,"threshold_uncertainty_score":0.0037381053},"labels":[],"label_agreement":null},{"id":"W6976599358","doi":"10.60692/hfx80-y9c40","title":"Toll-like receptor 9 and 4 gene polymorphisms in susceptibility and severity of malaria: a meta-analysis of genetic association studies","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Malaria; TLR9; Allele; Genetic association; Genetic predisposition; Plasmodium falciparum; Allele frequency; Toll-like receptor","score_opus":0.04116136619377514,"score_gpt":0.2351793782621878,"score_spread":0.19401801206841265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976599358","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.093236595,0.89830196,0.0045908163,0.0006399463,0.00046273632,0.00034046365,0.0017505733,0.0001320908,0.00054474024],"genre_scores_gemma":[0.8511606,0.13983752,0.0048359246,0.00063628075,0.0003275461,0.0007467043,0.0018094991,0.00009856661,0.0005474223],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.98267555,0.009680911,0.0033630757,0.002635735,0.0010863515,0.000558284],"domain_scores_gemma":[0.9705625,0.022070676,0.0033510819,0.0019389322,0.0015649016,0.00051178026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.020205043,0.0030468686,0.014334031,0.005137939,0.000979823,0.0035217179,0.0024066942,0.0024067562,0.0031589048],"category_scores_gemma":[0.028338715,0.0017002821,0.05347239,0.008303664,0.00073458126,0.0013993664,0.002005214,0.0025825915,0.00030783727],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00390976,0.000029205954,0.029614132,0.021508044,0.9398596,0.00023762132,0.000056913497,0.0008753472,0.0003445596,0.00008751518,0.00028651918,0.0031907898],"study_design_scores_gemma":[0.00040900716,0.0001581669,0.011804958,0.0011777035,0.985168,0.000105528095,0.00003171394,0.0005362326,0.000097529424,0.0001634222,0.00033147528,0.000016238573],"about_ca_topic_score_codex":0.0061914343,"about_ca_topic_score_gemma":0.007825053,"teacher_disagreement_score":0.020205043,"about_ca_system_score_codex":0.001544496,"about_ca_system_score_gemma":0.0019544973,"threshold_uncertainty_score":0.10685569},"labels":[],"label_agreement":null},{"id":"W6976915514","doi":"10.60692/20em7-ycy81","title":"Characterization of Innate Responses Induced by PLGA Encapsulated- and Soluble TLR Ligands In Vitro and In Vivo in Chickens","year":2017,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Innate immune system; Lipopolysaccharide; In vivo; Cytokine; In vitro; TLR4; Adjuvant; Toll-like receptor; TLR3","score_opus":0.01683054940733516,"score_gpt":0.21067273933185798,"score_spread":0.19384218992452282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976915514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961146,0.0010878368,0.0020804727,0.00003397153,0.000012389415,0.0000330242,0.00021107018,0.000023383454,0.0004032671],"genre_scores_gemma":[0.99364144,0.0008963801,0.0029937197,0.00005356449,0.0000075655953,0.00008467851,0.00037620557,0.000017611183,0.0019288351],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986005,0.0000209838,0.00001560672,0.000049238086,0.000025287576,0.000028857845],"domain_scores_gemma":[0.9998196,0.00004900136,0.00006151748,0.000014130626,0.00002565301,0.000030136336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019996539,0.0003382123,0.00018268771,0.00018678755,0.0000776488,0.00020719465,0.00014105528,0.0003084854,0.0003683208],"category_scores_gemma":[0.00015833639,0.00016917137,0.00022881583,0.000060447408,0.00018290296,0.00019281344,0.00010498824,0.00038535672,0.0001850658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064138556,0.000009492513,0.00014000229,0.000023893184,0.000001447578,0.000019003981,0.000014878264,0.000037450136,0.99945945,0.0000060610114,0.0000026844862,0.00022157695],"study_design_scores_gemma":[0.000010130099,0.0010079085,0.004128139,0.000008950855,0.000020215779,0.00010234727,0.000049535633,0.00044615075,0.9937186,0.000014629724,0.00048683456,0.000006441184],"about_ca_topic_score_codex":0.00062254164,"about_ca_topic_score_gemma":0.0007673088,"teacher_disagreement_score":0.00062254164,"about_ca_system_score_codex":0.00020768894,"about_ca_system_score_gemma":0.00010930202,"threshold_uncertainty_score":0.0015069246},"labels":[],"label_agreement":null},{"id":"W6977117055","doi":"10.6084/m9.figshare.12032982.v1","title":"Additional file 1 of Sustained exposure to systemic endotoxin triggers chemokine induction in the brain followed by a rapid influx of leukocytes","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chemokine; Flow cytometry; Bone marrow; Monocyte; Cytokine; Myeloid cells; CCL2; Myelopoiesis","score_opus":0.014873460691353122,"score_gpt":0.21088354095256265,"score_spread":0.19601008026120953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977117055","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026060134,0.000027376489,0.0004894038,0.00009410296,0.000042156385,0.00013712219,0.9975454,0.0006139997,0.00078977336],"genre_scores_gemma":[0.010552488,0.00027804528,0.00820306,0.00069721945,0.00013194453,0.004704253,0.9639398,0.0017050524,0.00978817],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991007,0.00008311898,0.00012299369,0.00023111473,0.00029070838,0.00017131932],"domain_scores_gemma":[0.9893086,0.0072309836,0.00078847696,0.00071588554,0.0013499224,0.00060607516],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017827402,0.0020160214,0.0023681,0.002386862,0.0018450471,0.00249977,0.003088203,0.001864453,0.9206191],"category_scores_gemma":[0.017681431,0.00096658577,0.0011545555,0.003742667,0.000523909,0.0023580717,0.0015125141,0.0015900552,0.2348586],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011890173,0.00036119294,0.0030612971,0.0083779935,0.00009148637,0.0003112698,0.00016053203,0.0007779226,0.0017360507,0.0010858634,0.96987647,0.012970843],"study_design_scores_gemma":[0.01360666,0.0015430677,0.043224145,0.008853701,0.00044319153,0.002372205,0.0010569661,0.0058185584,0.008834728,0.015650248,0.89806455,0.00053211953],"about_ca_topic_score_codex":0.0066624843,"about_ca_topic_score_gemma":0.012502621,"teacher_disagreement_score":0.9206191,"about_ca_system_score_codex":0.0011660508,"about_ca_system_score_gemma":0.0030522456,"threshold_uncertainty_score":0.11322725},"labels":[],"label_agreement":null},{"id":"W6980207445","doi":"","title":"Beyond inclusion: Transforming the educational governance relationships between First Nations and school districts in British Columbia","year":2005,"lang":"en","type":"dissertation","venue":"Summit (Simon Fraser University)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Context (archaeology); Government (linguistics); Subject (documents); Reflexivity; Population; Work (physics); Pretext","score_opus":0.007128883786566222,"score_gpt":0.20060908078525916,"score_spread":0.19348019699869293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6980207445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9150302,0.0011853114,0.00048141202,0.01046253,0.00008898801,0.00011248451,0.00012460511,0.000038074635,0.07247633],"genre_scores_gemma":[0.96655923,0.00047800824,0.0003281207,0.0007874866,0.0000061497753,0.000039726863,0.000062452295,0.00001677505,0.0317221],"study_design_codex":"qualitative","study_design_gemma":"qualitative","domain_scores_codex":[0.9957568,0.0010716985,0.00008154713,0.00034103545,0.000616214,0.0021327029],"domain_scores_gemma":[0.99362355,0.0009972064,0.00032036676,0.00023680017,0.0015308,0.0032912588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021557524,0.00021307175,0.00044775376,0.0017220629,0.03372332,0.009777987,0.0022537294,0.001519789,0.0074866833],"category_scores_gemma":[0.0052425233,0.00036987232,0.0001692401,0.003643547,0.008495307,0.00235778,0.009824483,0.0027772405,0.00050350185],"study_design_candidate":"qualitative","study_design_consensus":"qualitative","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011113444,0.00019550756,0.06142022,0.00024904677,0.000022343162,0.0027146423,0.7801819,0.00043682772,0.0013315767,0.049449883,0.01672172,0.087165274],"study_design_scores_gemma":[0.000012507756,0.000040232542,0.08271852,0.0003763221,0.000016702019,0.00013232668,0.7770678,0.00022167165,0.00030628286,0.0025494671,0.13650754,0.000050631388],"about_ca_topic_score_codex":0.9747703,"about_ca_topic_score_gemma":0.9940386,"teacher_disagreement_score":0.100106284,"about_ca_system_score_codex":0.100106284,"about_ca_system_score_gemma":0.1505733,"threshold_uncertainty_score":0.72632533},"labels":[],"label_agreement":null},{"id":"W6987415025","doi":"","title":"The structure of the carbohydrate backbone of core-lipid A region of the lipopolysaccharides from Proteus mirabilis wild-type strain S1959 (serotype 03) and its Ra mutant R110/1959","year":2000,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Strain (injury); Mutant; Carbohydrate; Proteus mirabilis; Bacteria; Mutation","score_opus":0.010855913622204404,"score_gpt":0.21087679812928048,"score_spread":0.20002088450707609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6987415025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99768984,0.00021577983,0.0004747335,0.00004728969,0.000018467374,0.000005302185,0.00033241385,0.000007801196,0.0012083506],"genre_scores_gemma":[0.9975803,0.000106404834,0.00047382383,0.000026402906,0.000004472502,0.0000028168845,0.00085867214,0.0000050914314,0.0009419976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999802,0.0000035608066,0.0000012420396,0.000004600579,0.0000050990634,0.000005252773],"domain_scores_gemma":[0.9998692,0.000021322086,0.0000417604,0.000010401043,0.000021291728,0.000035961555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00004673092,0.00019378364,0.000084207604,0.00014342443,0.0001734047,0.0001519281,0.000207785,0.00019715156,0.0016910608],"category_scores_gemma":[0.00018039951,0.000077621036,0.00016485217,0.00025297928,0.00017309959,0.00016261543,0.000094022536,0.00038209718,0.0002483449],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092902663,0.000041632888,0.0028738873,0.00006336547,0.000021603657,0.0004913592,0.00006849409,0.00061152864,0.99104744,0.0005367103,0.00018163995,0.0031333053],"study_design_scores_gemma":[0.000113017966,0.0011463566,0.18194385,0.00003621757,0.00010937855,0.0014152233,0.00069702265,0.009984316,0.79657745,0.0008676937,0.007052548,0.000056939996],"about_ca_topic_score_codex":0.0027968998,"about_ca_topic_score_gemma":0.0012678172,"teacher_disagreement_score":0.0027968998,"about_ca_system_score_codex":0.0002293221,"about_ca_system_score_gemma":0.00021804968,"threshold_uncertainty_score":0.005657196},"labels":[],"label_agreement":null},{"id":"W6991614131","doi":"","title":"How Canada could help ramp up vaccine production","year":2021,"lang":"en","type":"other","venue":"Bulletin of Miscellaneous Information (Royal Gardens Kew)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pandemic; Public health; Production (economics); Coronavirus disease 2019 (COVID-19); Global health; Plan (archaeology)","score_opus":0.005044069240383319,"score_gpt":0.17096698816499908,"score_spread":0.16592291892461578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6991614131","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017517353,0.00455798,0.000998672,0.65536726,0.022985281,0.00029932728,0.0018923181,0.0010069933,0.3111404],"genre_scores_gemma":[0.015897652,0.006197916,0.004827487,0.2589938,0.0029172935,0.0001692594,0.0016460748,0.00043825284,0.70891225],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9922767,0.0006111469,0.0001879705,0.00038115264,0.004057111,0.002486006],"domain_scores_gemma":[0.98477226,0.0007361281,0.00022027314,0.00037567958,0.006714256,0.0071814437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004317397,0.0012995753,0.0003905443,0.002135081,0.008490392,0.009002893,0.0018097768,0.011510705,0.112164296],"category_scores_gemma":[0.013094617,0.0006929137,0.0011769112,0.0016278365,0.0034473587,0.004625633,0.003799625,0.0075260303,0.03759514],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020826721,0.000034684883,0.00036060743,0.000042261825,0.000004757027,0.00012097085,0.000084065236,0.00010113653,0.00019108258,0.005537308,0.9781181,0.015384214],"study_design_scores_gemma":[0.000020667034,0.000016840822,0.0004516666,0.00005678989,0.0000052668242,0.00003210753,0.0002247382,0.00008282421,0.0001512613,0.0010006098,0.9979388,0.000018367517],"about_ca_topic_score_codex":0.91210365,"about_ca_topic_score_gemma":0.94511145,"teacher_disagreement_score":0.112164296,"about_ca_system_score_codex":0.03123102,"about_ca_system_score_gemma":0.15869598,"threshold_uncertainty_score":0.3752269},"labels":[],"label_agreement":null},{"id":"W6993097268","doi":"","title":"Nod1 and Nod2 in Innate Immune Responses, Adaptive Immunity and Bacterial Infection","year":2009,"lang":"en","type":"dissertation","venue":"TSpace","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Howard Hughes Medical Institute","keywords":"NOD1; NOD2; Pattern recognition receptor; Innate immune system; Acquired immune system; Receptor; Immune system; TLR4; Nod","score_opus":0.01145385421093205,"score_gpt":0.2859110398276609,"score_spread":0.2744571856167289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6993097268","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.014903864,0.9605409,0.0027808128,0.003148214,0.002094704,0.000019234241,0.00006576978,0.000029073237,0.016417494],"genre_scores_gemma":[0.13312931,0.8099553,0.0028943974,0.0019624652,0.0023204763,0.00007203361,0.00020082135,0.000018367738,0.049446825],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998807,0.000024049274,0.000007707986,0.000026997892,0.00003717868,0.000023275903],"domain_scores_gemma":[0.99993384,0.000012810078,0.000011871487,0.0000028524573,0.000016911063,0.00002161766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040817817,0.00035716928,0.00036329537,0.00029842753,0.0002677145,0.00073773577,0.0003416883,0.0005501143,0.0021106317],"category_scores_gemma":[0.0001557456,0.00009505973,0.00019883229,0.00034998587,0.00056601537,0.0006829327,0.0005010162,0.0011156396,0.00078939344],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013071714,0.000305404,0.002713773,0.008484526,0.0001451223,0.0028970097,0.0014610905,0.002164166,0.23941138,0.14765163,0.059299868,0.53415895],"study_design_scores_gemma":[0.00005397645,0.0005841205,0.005479108,0.0013541956,0.000064640684,0.0027267686,0.0005056861,0.0007921909,0.042454943,0.039677944,0.9062421,0.00006433649],"about_ca_topic_score_codex":0.00035430884,"about_ca_topic_score_gemma":0.00049102725,"teacher_disagreement_score":0.0021106317,"about_ca_system_score_codex":0.0003931826,"about_ca_system_score_gemma":0.00043220172,"threshold_uncertainty_score":0.007060766},"labels":[],"label_agreement":null},{"id":"W6996298519","doi":"","title":"Revolution Within A Revolution: Québec's experiment with co-operative health care &amp; social service delivery","year":2007,"lang":"en","type":"article","venue":"AUSpace (Athabasca University)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"State (computer science); Health care; Solidarity; Action (physics); Intervention (counseling); Service (business); Health services; Discounting; Agency (philosophy); Health insurance","score_opus":0.012951165887125467,"score_gpt":0.2514400319948991,"score_spread":0.23848886610777364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6996298519","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16870305,0.01869093,0.002864628,0.44244853,0.0024384437,0.00021031938,0.0006642112,0.0002300484,0.3637499],"genre_scores_gemma":[0.8201738,0.0039886506,0.0017344581,0.051691093,0.00027243083,0.000101788304,0.00018639963,0.00007490518,0.12177652],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"observational","domain_scores_codex":[0.9952644,0.0014283584,0.000052429783,0.00029704632,0.0009370758,0.0020206429],"domain_scores_gemma":[0.9957104,0.0015222908,0.00016899941,0.00024323318,0.0009148237,0.0014402983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004344525,0.00034404095,0.00032458932,0.00072398497,0.016045235,0.008316777,0.00126617,0.0041049304,0.009686825],"category_scores_gemma":[0.0047018053,0.00034623282,0.00051772356,0.0011697682,0.009715929,0.0024437634,0.0026795238,0.0057941065,0.00039718812],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00030714902,0.00033503008,0.008691453,0.0001986874,0.000059766106,0.0013353438,0.024447452,0.0020154142,0.0015692088,0.608355,0.27029714,0.082388334],"study_design_scores_gemma":[0.00019868383,0.0001744013,0.03892203,0.00023221428,0.000033510318,0.00017405768,0.016187133,0.0020165963,0.0005787251,0.014249406,0.9271011,0.00013214942],"about_ca_topic_score_codex":0.9906538,"about_ca_topic_score_gemma":0.993808,"teacher_disagreement_score":0.86117744,"about_ca_system_score_codex":0.13882253,"about_ca_system_score_gemma":0.110757686,"threshold_uncertainty_score":0.9988438},"labels":[],"label_agreement":null},{"id":"W6996421831","doi":"","title":"Resistance : ALJAZ : November 5, 2017 12:32pm-1:01pm AST","year":2017,"lang":"en","type":"other","venue":"Bulletin of Miscellaneous Information (Royal Gardens Kew)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Opposition (politics); Clan; Resistance (ecology); Natural disaster","score_opus":0.006831544735287632,"score_gpt":0.19260031857408164,"score_spread":0.185768773838794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6996421831","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022183675,0.0011990597,0.0003570188,0.00881644,0.016141199,0.00029489145,0.0056085773,0.0032213232,0.96214306],"genre_scores_gemma":[0.0029534593,0.00024527198,0.000086773754,0.0006855253,0.0006633544,0.000038843467,0.0010324613,0.0003290592,0.9939653],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995912,0.000048537815,0.000009641171,0.000042273143,0.00014469035,0.00016377281],"domain_scores_gemma":[0.9993185,0.00003864358,0.000023321101,0.000045132154,0.0002901402,0.00028417938],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00072240154,0.0010837085,0.000616015,0.00081439805,0.0038800656,0.0039046414,0.00077994,0.0026465282,0.6976904],"category_scores_gemma":[0.0015944975,0.00038467857,0.0005573725,0.0004517232,0.0005921682,0.0014168317,0.0031003894,0.0033536877,0.49230942],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012829379,0.00005989658,0.00023753649,0.00006440708,0.0000029915864,0.000072617106,0.00008523842,0.000023930694,0.00033078794,0.0005744509,0.98529935,0.0131205255],"study_design_scores_gemma":[0.000015045155,0.000038622555,0.0013243803,0.00009804173,0.0000017955068,0.000025048119,0.00020743503,0.00003821816,0.00022095752,0.00017534073,0.9978485,0.0000065201184],"about_ca_topic_score_codex":0.007562196,"about_ca_topic_score_gemma":0.047060028,"teacher_disagreement_score":0.30230957,"about_ca_system_score_codex":0.0013624739,"about_ca_system_score_gemma":0.0013543268,"threshold_uncertainty_score":0.4312079},"labels":[],"label_agreement":null},{"id":"W6996799020","doi":"","title":"The structure of the carbohydrate backbone of the rough type lipopolysaccharides from proteus penneri strains 12, 13, 37 and 44.: Carbohyd.Res.","year":2002,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Carbohydrate; Strain (injury); Bacteria; Proteus; Carbohydrate conformation","score_opus":0.010209905334041878,"score_gpt":0.19661643106649243,"score_spread":0.18640652573245056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6996799020","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99351645,0.0017836615,0.0009784285,0.00020717738,0.00003346774,0.000016074715,0.000650118,0.000014030125,0.0028005955],"genre_scores_gemma":[0.9912651,0.0014519618,0.0013048224,0.000081388665,0.000021192076,0.000009246511,0.00233725,0.000009186084,0.0035198503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999757,0.0000055028295,0.0000017996708,0.0000044059466,0.0000055812197,0.000007004785],"domain_scores_gemma":[0.999889,0.000015289137,0.00003706083,0.000009852637,0.000022221075,0.000026573822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00010237606,0.00031643268,0.00012417242,0.00027150876,0.00025920718,0.0002683472,0.00022155745,0.00021150587,0.0019839138],"category_scores_gemma":[0.000245723,0.00013544636,0.00015395824,0.000402086,0.0002625901,0.00027981613,0.00019081845,0.0005120643,0.0004284116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001378425,0.000089836605,0.00528022,0.00025195372,0.00005532335,0.00090804254,0.00027062776,0.0011116794,0.96773636,0.0015314219,0.0007974202,0.020588567],"study_design_scores_gemma":[0.00013649676,0.002643699,0.33437145,0.00023616418,0.00028951574,0.0028281047,0.001336687,0.009277801,0.6091133,0.00356889,0.03608483,0.00011317392],"about_ca_topic_score_codex":0.002263482,"about_ca_topic_score_gemma":0.0014316277,"teacher_disagreement_score":0.002263482,"about_ca_system_score_codex":0.00028435414,"about_ca_system_score_gemma":0.00029387252,"threshold_uncertainty_score":0.006636858},"labels":[],"label_agreement":null},{"id":"W7000377080","doi":"","title":"Evolution of the inflammatory and fibroproliferative responses during resolution and repair following ventilator induced lung injury in the rat","year":2011,"lang":"en","type":"article","venue":"Research Portal (Queen's University Belfast)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lung; Inflammation; Inflammatory response; Resolution (logic); Fibrosis; Respiratory system; Ischemic injury; Respiratory disease","score_opus":0.015807489732165853,"score_gpt":0.2523632675800522,"score_spread":0.2365557778478863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000377080","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996896,0.001442549,0.0004907567,0.000058521156,0.000021850914,0.000017613129,0.00029902867,0.000039593015,0.00073408167],"genre_scores_gemma":[0.99498206,0.0009813098,0.00044999886,0.00009099737,0.00001995863,0.000044215423,0.0005016386,0.00001390979,0.0029159165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997694,0.000029246083,0.000016261807,0.00004012273,0.000043417782,0.00010166082],"domain_scores_gemma":[0.9993457,0.00009640372,0.00023159708,0.00006603898,0.00006047191,0.00019970305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036452594,0.0003121908,0.00040654946,0.0010697601,0.00023090067,0.00057223806,0.0002472668,0.0006112267,0.0009963039],"category_scores_gemma":[0.00031415,0.00037791827,0.00040942227,0.0003749005,0.0005980321,0.00062438723,0.00019494024,0.00097523147,0.00040320415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006904042,0.00034809537,0.0044329516,0.000077307515,0.00002530175,0.00051669055,0.00019118216,0.00017978238,0.98096013,0.00026886826,0.00011028892,0.0059854696],"study_design_scores_gemma":[0.0001363323,0.0067018606,0.22837418,0.000041807154,0.00013544691,0.0011751476,0.0007394403,0.0012851519,0.75865895,0.00061934633,0.0020552392,0.000077179444],"about_ca_topic_score_codex":0.00095713435,"about_ca_topic_score_gemma":0.0014010726,"teacher_disagreement_score":0.0010697601,"about_ca_system_score_codex":0.0003519157,"about_ca_system_score_gemma":0.0002995001,"threshold_uncertainty_score":0.003332913},"labels":[],"label_agreement":null},{"id":"W7000488253","doi":"","title":"Evasion of toll-like receptors by flagellated bacteria.","year":2005,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Receptor; Evasion (ethics); Immune system; Signal transduction","score_opus":0.006053301880186081,"score_gpt":0.21035366078418605,"score_spread":0.20430035890399997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000488253","genre_codex":"other","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16670354,0.20409624,0.006835874,0.09353748,0.2007292,0.00037765683,0.0061825006,0.0008235952,0.320714],"genre_scores_gemma":[0.3869823,0.064030886,0.0039413436,0.006505878,0.020307656,0.00008661249,0.005867809,0.000179788,0.51209784],"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995509,0.000069321555,0.000040693474,0.000045076315,0.00022742954,0.00006652369],"domain_scores_gemma":[0.9980869,0.0003198523,0.00015987315,0.000121392506,0.0009367635,0.0003752409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011228652,0.00028707512,0.0003748617,0.00041774384,0.0004204323,0.0010009578,0.0004565291,0.000677598,0.026992835],"category_scores_gemma":[0.0019427976,0.00012699339,0.00019856762,0.00022846485,0.00035137177,0.0006502114,0.00052182947,0.0012756287,0.0076459786],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002408234,0.00024967923,0.0013157228,0.0026820695,0.00005930532,0.0012695172,0.00018093786,0.00020169567,0.17799528,0.01738456,0.5429514,0.25330162],"study_design_scores_gemma":[0.000085326,0.00040900934,0.0061535784,0.00024614384,0.000035185094,0.0010314513,0.00012604642,0.00041177994,0.10466015,0.0014080933,0.8854109,0.00002219691],"about_ca_topic_score_codex":0.0007174743,"about_ca_topic_score_gemma":0.0016525334,"teacher_disagreement_score":0.026992835,"about_ca_system_score_codex":0.0007014561,"about_ca_system_score_gemma":0.00081167876,"threshold_uncertainty_score":0.09030002},"labels":[],"label_agreement":null},{"id":"W7000499803","doi":"","title":"Étude des voies apoptotiques induites par le 4-hydroxynonénal dans les chondrocytes arthrosiques humains","year":2007,"lang":"fr","type":"other","venue":"Open MIND","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Chondrocyte; Mesenchymal stem cell; Extracellular matrix; Cell culture; Cell","score_opus":0.029582439554062367,"score_gpt":0.29096577507353316,"score_spread":0.2613833355194708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7000499803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9780426,0.015869664,0.0024006863,0.00012610242,0.000071726325,0.000072016184,0.00034450836,0.00005284633,0.0030198833],"genre_scores_gemma":[0.97583413,0.0056154,0.0019083003,0.00007038367,0.00004383955,0.00007489745,0.0002343086,0.000016237924,0.01620245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998023,0.00004431444,0.000012893558,0.00004479142,0.000065486005,0.000030322453],"domain_scores_gemma":[0.99964345,0.000118484146,0.00005143819,0.000027166965,0.000115375566,0.000044018227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057643285,0.00032408128,0.00039985447,0.00062069943,0.00033916757,0.00046485287,0.0001997333,0.00037674882,0.0016382476],"category_scores_gemma":[0.00045102593,0.00018570818,0.00025917185,0.00029481936,0.0006077955,0.00022638925,0.00014047838,0.0003781466,0.00026773056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015808997,0.00007753453,0.002778001,0.00014893849,0.000023108085,0.00042586363,0.00042245447,0.00008474137,0.97989666,0.000095867166,0.00008600282,0.0143799735],"study_design_scores_gemma":[0.00017624827,0.0026577367,0.072175026,0.00003266527,0.00014355514,0.0011288284,0.0006522502,0.0007229508,0.9141506,0.00011452485,0.008022035,0.000023670895],"about_ca_topic_score_codex":0.01501922,"about_ca_topic_score_gemma":0.012965668,"teacher_disagreement_score":0.01501922,"about_ca_system_score_codex":0.00040224107,"about_ca_system_score_gemma":0.0003758361,"threshold_uncertainty_score":0.029863596},"labels":[],"label_agreement":null},{"id":"W7008435399","doi":"","title":"Características físico-químicas de la leche cruda en las zonas de\\n\\nAroa y Yaracal, Venezuela","year":2002,"lang":"es","type":"other","venue":"Redalyc (Universidad Autónoma del Estado de México)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nova scotia; West virginia; Bovine milk; Zona pellucida","score_opus":0.010138709944464447,"score_gpt":0.24071657032050345,"score_spread":0.230577860376039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7008435399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99860793,0.00028328807,0.00004277508,0.0000084156145,0.0000020262162,0.000009953669,0.00035440843,0.0000028020083,0.00068847113],"genre_scores_gemma":[0.99738246,0.00024719723,0.00021131744,0.000009686778,0.000002115007,0.000014227376,0.00034589277,0.0000018042458,0.001785346],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999198,0.0000109536695,0.000002962418,0.00002688302,0.000013687764,0.000025649806],"domain_scores_gemma":[0.99978656,0.000028124046,0.00007669986,0.000009240636,0.0000676801,0.00003166565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016931434,0.00023378718,0.00020848932,0.00061836647,0.00056168565,0.0006196612,0.00014720391,0.0001804463,0.0016015673],"category_scores_gemma":[0.00028545235,0.00018476184,0.00018793662,0.0008781917,0.0002992495,0.00021256323,0.00020588329,0.00024279609,0.00013221723],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009082242,0.00011852268,0.95043856,0.00010815361,0.0000791016,0.00014920685,0.0021337247,0.00014925368,0.037431672,0.000072789706,0.00016302869,0.00824769],"study_design_scores_gemma":[0.0000020246137,0.00009141207,0.99831223,0.000005400196,0.000011160563,0.000020210093,0.0006704607,0.000056470722,0.0004454854,0.0000068097497,0.00037550606,0.000002891724],"about_ca_topic_score_codex":0.17382278,"about_ca_topic_score_gemma":0.37105078,"teacher_disagreement_score":0.17382278,"about_ca_system_score_codex":0.0011197686,"about_ca_system_score_gemma":0.0004644782,"threshold_uncertainty_score":0.345622},"labels":[],"label_agreement":null},{"id":"W7015405819","doi":"","title":"Structural analysis of the core region of lipopolysaccharides from Proteus mirabilis serotypes 06, 048 and 057","year":2000,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Serotype; Proteus mirabilis; Core (optical fiber); Proteus; Bacteria","score_opus":0.014567485265710535,"score_gpt":0.22469099103231624,"score_spread":0.2101235057666057,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7015405819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998262,0.00025669375,0.00051602954,0.00006828439,0.00001729202,0.000010438966,0.00023139556,0.000008718656,0.00062918797],"genre_scores_gemma":[0.99667287,0.00015070362,0.0011290119,0.00005349885,0.000008134407,0.000006975792,0.0012060914,0.000007331471,0.00076545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99992585,0.000013887856,0.0000045438896,0.000010138378,0.000022590679,0.000022953895],"domain_scores_gemma":[0.99973005,0.000056138513,0.000065093256,0.000021488131,0.00007005145,0.000057204055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015460009,0.0002791359,0.00016648269,0.00022250523,0.00024905722,0.00021408974,0.00027247996,0.00025955166,0.0011870391],"category_scores_gemma":[0.000490228,0.00011642537,0.00031136567,0.00025858489,0.00019207726,0.00017596222,0.00020073832,0.0004402091,0.0004671528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008669962,0.00011124066,0.004322973,0.00008938132,0.000026972433,0.00037250048,0.00016465849,0.0003302827,0.9893338,0.00030943798,0.00026953986,0.0038021817],"study_design_scores_gemma":[0.00008909394,0.0013488563,0.15933827,0.000044515862,0.00013056891,0.0015645223,0.001092907,0.006370343,0.8166386,0.0005413575,0.01279465,0.00004640108],"about_ca_topic_score_codex":0.002571882,"about_ca_topic_score_gemma":0.001852912,"teacher_disagreement_score":0.002571882,"about_ca_system_score_codex":0.0002951332,"about_ca_system_score_gemma":0.00035531275,"threshold_uncertainty_score":0.00511384},"labels":[],"label_agreement":null},{"id":"W7015483326","doi":"","title":"Structural characterization of the lipid A region of Aeromonas salmonicida subsp. salmonicida lipopolysaccharide.: Carbohyd.Res.","year":2006,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aeromonas salmonicida; Bacteria; Aeromonas; Immune system; Vibrionaceae","score_opus":0.0077059516102678475,"score_gpt":0.19776979049769494,"score_spread":0.1900638388874271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7015483326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99556017,0.0010096221,0.0013443675,0.00017437497,0.000033186294,0.000017502764,0.00047131337,0.000010351006,0.0013791125],"genre_scores_gemma":[0.99127406,0.00096723164,0.0016286722,0.00011966171,0.000017636474,0.000016936958,0.0026825583,0.000012618929,0.0032806608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99996424,0.0000057189272,0.0000036918184,0.00000805966,0.0000075197117,0.000010743831],"domain_scores_gemma":[0.9998398,0.000029350997,0.000042573614,0.000016730968,0.000032191158,0.000039380317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015532589,0.00030057595,0.00009336167,0.00015138596,0.00018675638,0.00017205779,0.00016141078,0.00020446013,0.0014906994],"category_scores_gemma":[0.00024242923,0.00009841253,0.00025218358,0.00016860451,0.00020034635,0.00020958473,0.00016528326,0.00047325436,0.0006019134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018063902,0.000025773224,0.00037836365,0.000038056227,0.000004718724,0.00009357203,0.000037779017,0.00008422346,0.99794525,0.00012472755,0.00006297094,0.001023936],"study_design_scores_gemma":[0.000098673394,0.0012851403,0.0715777,0.00008061879,0.000053604585,0.0011000169,0.00045737167,0.002174868,0.90689725,0.0005404132,0.01570379,0.000030467998],"about_ca_topic_score_codex":0.0020270592,"about_ca_topic_score_gemma":0.0015115753,"teacher_disagreement_score":0.0020270592,"about_ca_system_score_codex":0.0003025009,"about_ca_system_score_gemma":0.00027014824,"threshold_uncertainty_score":0.004986942},"labels":[],"label_agreement":null},{"id":"W7019811783","doi":"","title":"Inhibition of lipopolysaccharide-mediated toll-like receptor 4 activation abrogates gastric adenocarcinoma-associated peritoneal metastasis","year":2020,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Metastasis; Receptor; Cancer; Cytokine; Tyrosine kinase; Signal transduction","score_opus":0.013544858291069462,"score_gpt":0.22425983505163263,"score_spread":0.21071497676056317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7019811783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96577203,0.006396647,0.0027193269,0.0012729121,0.0003538638,0.0001716903,0.00045958362,0.00029742534,0.022556411],"genre_scores_gemma":[0.9505664,0.006717345,0.0017558454,0.00033781637,0.00008624813,0.000119816104,0.0005167245,0.00004837824,0.039851386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999083,0.000011202985,0.0000033487377,0.0000074598506,0.000026112984,0.00004357557],"domain_scores_gemma":[0.99996126,0.0000052462156,0.000007335555,0.000004053312,0.0000044808344,0.0000174734],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001435518,0.00034645948,0.0002568815,0.00029452212,0.0001554056,0.00024456836,0.00024046972,0.00021510257,0.006120405],"category_scores_gemma":[0.00010509923,0.00017138923,0.00024580173,0.00010040398,0.00018796438,0.000114373615,0.00021972177,0.00064475206,0.0011991325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006813237,0.00045133333,0.00019138097,0.00007046329,0.000010379933,0.000093936134,0.000022622637,0.00014925531,0.98024356,0.00033140575,0.0010825525,0.016671592],"study_design_scores_gemma":[0.00041223667,0.0039552255,0.014646307,0.000044324497,0.000059422968,0.00038526836,0.00011196887,0.0010439529,0.9581547,0.0002497176,0.020922745,0.000014194062],"about_ca_topic_score_codex":0.0011574368,"about_ca_topic_score_gemma":0.0017463181,"teacher_disagreement_score":0.006120405,"about_ca_system_score_codex":0.00022452122,"about_ca_system_score_gemma":0.0003976433,"threshold_uncertainty_score":0.020474851},"labels":[],"label_agreement":null},{"id":"W7024158534","doi":"","title":"Rolle von Lymphotoxin Beta und Zelladhäsionsmolekül (CEACAM1) in Angeborene und adaptive Immunaktivierung","year":2017,"lang":"en","type":"other","venue":"DuEPublico (University of Duisburg-Essen)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Mercator Research Center Ruhr; Deutsche Krebshilfe; Deutsche Forschungsgemeinschaft; Alexander von Humboldt-Stiftung; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; Stem Cell Network; National Institutes of Health; National Science Foundation","keywords":"Immune system; Innate immune system; Acquired immune system; Lymphotoxin; Viral replication; Interferon; T cell; Virus","score_opus":0.011279577499306267,"score_gpt":0.2261993387475083,"score_spread":0.21491976124820203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7024158534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97862524,0.017620964,0.0016610143,0.00026034072,0.000066406414,0.000025161396,0.00013691754,0.00006317267,0.0015407581],"genre_scores_gemma":[0.9944745,0.0028002753,0.00071159593,0.000092608156,0.000017043312,0.000027246308,0.00019975529,0.0000074121326,0.0016696333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988437,0.000017272025,0.000009806731,0.000026791162,0.00002928562,0.000032414464],"domain_scores_gemma":[0.9999362,0.000009169451,0.000021024342,0.0000052709383,0.0000095492705,0.00001877128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019453061,0.00024855384,0.00018912049,0.00020169994,0.00012894538,0.00040607012,0.00012744137,0.00031132234,0.0011823683],"category_scores_gemma":[0.00017295439,0.00010107613,0.0002645769,0.000081657345,0.00017396745,0.0002297344,0.00027961293,0.00067609857,0.0002849045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028333958,0.000040249273,0.0017872921,0.00012838989,0.000023594292,0.00022332439,0.000040045048,0.00011225483,0.98589826,0.00034211733,0.00015538675,0.010965685],"study_design_scores_gemma":[0.0000435457,0.000672485,0.014952958,0.000032097534,0.000067750276,0.0011259475,0.000053464086,0.00080040307,0.9684164,0.00031484413,0.013509599,0.0000104828505],"about_ca_topic_score_codex":0.00021157043,"about_ca_topic_score_gemma":0.0001797162,"teacher_disagreement_score":0.0011823683,"about_ca_system_score_codex":0.00030948254,"about_ca_system_score_gemma":0.00013011716,"threshold_uncertainty_score":0},"labels":[],"label_agreement":null},{"id":"W7026542520","doi":"","title":"Activation of p38 plays a pivotal role in the inhibitory effect of lipopolysaccharide and interleukin-1beta-induced inhibition of long-term potentiation in rat dentate gyrus","year":2003,"lang":"en","type":"article","venue":"Arrow@dit (Dublin Institute of Technology)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"Higher Education Authority; Health Research Board","keywords":"Long-term potentiation; Dentate gyrus; p38 mitogen-activated protein kinases; Perforant Pathway; Inhibitory postsynaptic potential; Stimulation; Lipopolysaccharide; Entorhinal cortex","score_opus":0.007090234311687467,"score_gpt":0.22750008665622312,"score_spread":0.22040985234453567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7026542520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9844913,0.007855987,0.00377308,0.0004677831,0.00020029944,0.000052408133,0.00035371023,0.0001712267,0.002634327],"genre_scores_gemma":[0.98964244,0.00491824,0.0017112633,0.00006972452,0.000047667487,0.000111675945,0.00039844587,0.000018567449,0.003082018],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998698,0.00001588238,0.0000144121,0.000021575577,0.000027594006,0.00005065218],"domain_scores_gemma":[0.99991584,0.0000048254938,0.000024205876,0.000007687907,0.0000129873615,0.000034403878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000189927,0.0010740535,0.00037105862,0.00022649375,0.00023824534,0.00018731027,0.00019311262,0.00019538478,0.002136093],"category_scores_gemma":[0.00013522402,0.00022271366,0.00046090723,0.00012035284,0.0003379002,0.00028053683,0.0003121688,0.00083887135,0.00052784936],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011933019,0.0001564211,0.00030402798,0.00022469844,0.000020732283,0.00037160874,0.000046163925,0.00005046276,0.9933397,0.00021238039,0.00014111794,0.003939346],"study_design_scores_gemma":[0.00020593555,0.0016757657,0.019279564,0.000050745042,0.000074191674,0.0008240635,0.00009911691,0.0008011051,0.9720187,0.00044218698,0.004518149,0.000010492816],"about_ca_topic_score_codex":0.000315375,"about_ca_topic_score_gemma":0.00045788166,"teacher_disagreement_score":0.002136093,"about_ca_system_score_codex":0.00017390592,"about_ca_system_score_gemma":0.00027866362,"threshold_uncertainty_score":0.0071458817},"labels":[],"label_agreement":null},{"id":"W7043644379","doi":"","title":"Structural studies of the core region of Aeromonas salmonicida subsp. salmonicida lipopolysaccharide: Carbohydr.Res.","year":2006,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Aeromonas salmonicida; In vivo; Core (optical fiber); Oligosaccharide; Vibrionaceae","score_opus":0.029200151641660347,"score_gpt":0.26097155115632836,"score_spread":0.23177139951466802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7043644379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979907,0.00026632045,0.0009476503,0.000052835527,0.0000048949732,0.000010666877,0.00020305623,0.000008485193,0.00051538064],"genre_scores_gemma":[0.9956676,0.00029784188,0.0018841913,0.000049061517,0.0000053543117,0.000013681963,0.0010093914,0.000010207628,0.0010626637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999728,0.0000049837295,0.0000019526954,0.0000060465063,0.000007155999,0.0000071345276],"domain_scores_gemma":[0.9998573,0.000020405245,0.000041429706,0.000013264771,0.00003371399,0.000033771143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001179661,0.00033191248,0.000113040405,0.00011644004,0.00013121897,0.00012119746,0.00017726548,0.00020881179,0.00071204075],"category_scores_gemma":[0.00024232801,0.00010169973,0.00018431262,0.0001460105,0.00016128876,0.00017210816,0.00013920348,0.00033110497,0.00024932047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006879485,0.000012192958,0.00033958984,0.000019498175,0.0000019835365,0.000047492376,0.000026321271,0.000059448867,0.99880815,0.000036883648,0.0000115854855,0.0005680154],"study_design_scores_gemma":[0.000043505206,0.00069567055,0.07712314,0.000023094493,0.000041068466,0.0008748014,0.00023183832,0.0023321924,0.9144135,0.00023868724,0.003964099,0.000018360071],"about_ca_topic_score_codex":0.0021031639,"about_ca_topic_score_gemma":0.0018435488,"teacher_disagreement_score":0.0021031639,"about_ca_system_score_codex":0.00030228094,"about_ca_system_score_gemma":0.00027419208,"threshold_uncertainty_score":0.0041818023},"labels":[],"label_agreement":null},{"id":"W7096892890","doi":"","title":"EFFET DE LA STIMULATION DES TLR SUR","year":2008,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Stimulation; Immune system; MEDLINE; Action (physics)","score_opus":0.012236665225889214,"score_gpt":0.2371495820293131,"score_spread":0.2249129168034239,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7096892890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939865,0.0020376039,0.0002476594,0.0009065789,0.0005506751,0.00002571195,0.00020309968,0.00002864625,0.0020135078],"genre_scores_gemma":[0.9825598,0.0016960934,0.0004859616,0.00051964715,0.00023022594,0.0000939233,0.00045071688,0.00001316792,0.013950433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992661,0.00030928443,0.000027708733,0.00009532288,0.00006911686,0.00023250184],"domain_scores_gemma":[0.99909914,0.0003852279,0.00004517917,0.000079510304,0.00013299326,0.00025793494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006474945,0.00029230048,0.00054249563,0.00016766922,0.0005292075,0.00079210993,0.00025407257,0.0011316512,0.018283661],"category_scores_gemma":[0.0011627697,0.00018939118,0.0005253682,0.00018863425,0.00041006325,0.00035713316,0.00044317008,0.0014788567,0.0020088751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.089191444,0.0067990883,0.004166154,0.0006462867,0.00020361698,0.0004410791,0.00073803193,0.00059313787,0.83728904,0.00066012173,0.0037947085,0.05547725],"study_design_scores_gemma":[0.0059062485,0.1146043,0.08866122,0.0002882334,0.00048440357,0.0010008925,0.002960799,0.003794996,0.7425511,0.0009137384,0.038673397,0.00016065616],"about_ca_topic_score_codex":0.001715386,"about_ca_topic_score_gemma":0.0025739132,"teacher_disagreement_score":0.018283661,"about_ca_system_score_codex":0.0003175433,"about_ca_system_score_gemma":0.00064207235,"threshold_uncertainty_score":0.061164975},"labels":[],"label_agreement":null},{"id":"W7100834496","doi":"","title":"design of these studies. Corresponding Author:","year":2016,"lang":"en","type":"article","venue":"","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Bronchoalveolar lavage; Inflammation; Receptor; Antibody; Peripheral blood mononuclear cell; Cigarette smoke","score_opus":0.06617480714329818,"score_gpt":0.3094708223646833,"score_spread":0.24329601522138514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7100834496","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22977975,0.020460002,0.15864156,0.020183776,0.058737963,0.14760493,0.06441296,0.002692459,0.2974867],"genre_scores_gemma":[0.40814507,0.0162632,0.09225694,0.019744981,0.008465502,0.10659014,0.029671751,0.0009972098,0.31786516],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957903,0.0014299153,0.00043401634,0.0012024457,0.00063909596,0.00050422933],"domain_scores_gemma":[0.99607384,0.00088151474,0.00031788263,0.0009651354,0.00081527483,0.0009463272],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.007857878,0.0013396798,0.0019570775,0.00085706566,0.0013583273,0.001995623,0.0016411563,0.0026314475,0.12829973],"category_scores_gemma":[0.0062294486,0.00070681574,0.0009557551,0.0008560691,0.0011723534,0.0013578804,0.0014895763,0.0024473022,0.036675844],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.08098123,0.018422548,0.018990338,0.01288606,0.0014276912,0.0062608398,0.002475792,0.0017537186,0.30797538,0.07365502,0.13331397,0.34185752],"study_design_scores_gemma":[0.008198384,0.024482017,0.014124409,0.0015541234,0.00090922695,0.0026049404,0.0012172802,0.0013258603,0.036895,0.011730771,0.8968163,0.00014165009],"about_ca_topic_score_codex":0.0005696469,"about_ca_topic_score_gemma":0.0010886374,"teacher_disagreement_score":0.8717003,"about_ca_system_score_codex":0.0009804907,"about_ca_system_score_gemma":0.0023064096,"threshold_uncertainty_score":0.42920536},"labels":[],"label_agreement":null},{"id":"W7105799889","doi":"10.17605/osf.io/67e8r","title":"Supplemental materials for: Neonatal lipopolysaccharide administration causes long-term changes in adult mouse immunosteroids","year":2024,"lang":"","type":"article","venue":"OSF Preprints (OSF Preprints)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Lipopolysaccharide; Immune system; Administration (probate law); Disease; Immunity","score_opus":0.012715971917660409,"score_gpt":0.27432076618969825,"score_spread":0.26160479427203787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7105799889","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061785793,0.0006317441,0.018164167,0.0010333969,0.0016619622,0.00050111656,0.9488828,0.011790029,0.011156259],"genre_scores_gemma":[0.023380196,0.0014508155,0.042333033,0.0011271659,0.00053478114,0.003369842,0.88085383,0.006201961,0.040748376],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987919,0.000104028004,0.00016025681,0.00026283428,0.00039894745,0.00028198486],"domain_scores_gemma":[0.99607456,0.0014963924,0.00047315288,0.0006802046,0.0005201243,0.0007555959],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012479203,0.0031747585,0.002053469,0.0052621025,0.0018165791,0.0016597204,0.0035780116,0.0027241353,0.6950503],"category_scores_gemma":[0.0026817955,0.0024855954,0.0020530187,0.0031424833,0.0007155249,0.0016233913,0.0015082583,0.0038358874,0.19361196],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0023885467,0.0017960888,0.00250516,0.005417117,0.0002854489,0.0005089571,0.00018536417,0.001547703,0.14903493,0.0058788597,0.7891792,0.041272644],"study_design_scores_gemma":[0.0028269873,0.0012373247,0.049790103,0.001445072,0.0003165378,0.0019262345,0.0003054988,0.0057360707,0.16013248,0.012296062,0.76350546,0.00048207323],"about_ca_topic_score_codex":0.0038802426,"about_ca_topic_score_gemma":0.007655612,"teacher_disagreement_score":0.6950503,"about_ca_system_score_codex":0.0011650904,"about_ca_system_score_gemma":0.0020974572,"threshold_uncertainty_score":0.43497372},"labels":[],"label_agreement":null},{"id":"W7106339636","doi":"10.1093/jimmun/vkaf283.381","title":"FB-631 as a promising therapeutic tool for the treatment of non-small cell lung carcinoma 2469","year":2025,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Lung cancer; Immune system; Lung; Innate immune system; Treatment of lung cancer; Immunotherapy; CD8; Activator (genetics)","score_opus":0.010720616124998512,"score_gpt":0.2509592841878205,"score_spread":0.240238668062822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7106339636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5971509,0.35402262,0.013635487,0.003029797,0.0012488096,0.0003568705,0.0014463942,0.0005038208,0.02860534],"genre_scores_gemma":[0.85086447,0.11006664,0.008629688,0.0010692069,0.00033319357,0.00016916133,0.001779163,0.000050774488,0.027037732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999677,0.000006375263,0.0000025121944,0.0000052601067,0.000010522004,0.0000076683],"domain_scores_gemma":[0.99997807,0.0000031979853,0.0000045314123,0.0000013404338,0.0000054360207,0.000007439398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000118247655,0.00035678642,0.000292089,0.00036308903,0.00014013107,0.00026153296,0.00016668488,0.0003697387,0.0026412145],"category_scores_gemma":[0.000047385736,0.000076043354,0.0003051109,0.00016692234,0.00012002198,0.00019905137,0.00016704765,0.00043255396,0.0009072099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012564991,0.0004073257,0.0006562581,0.001177389,0.000034648743,0.0006479883,0.000036158068,0.00042753224,0.8491564,0.0011216593,0.0030421913,0.14203598],"study_design_scores_gemma":[0.00035914406,0.008047254,0.0074809412,0.00029587696,0.00023404678,0.0032223952,0.00005598981,0.0017468749,0.8228025,0.00074744265,0.1549586,0.000048888258],"about_ca_topic_score_codex":0.00056987064,"about_ca_topic_score_gemma":0.0008615444,"teacher_disagreement_score":0.0026412145,"about_ca_system_score_codex":0.00020147196,"about_ca_system_score_gemma":0.00022475299,"threshold_uncertainty_score":0.008835673},"labels":[],"label_agreement":null},{"id":"W7110886033","doi":"10.1067/mai.2003.1781","title":"Systemic responsiveness to lipopolysaccharide and polymorphisms in the toll-like receptor 4 gene in human beings","year":2003,"lang":"en","type":"article","venue":"UWA Profiles and Research Repository (University of Western Australia)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Global Health Research","funders":"","keywords":"Lipopolysaccharide; TLR4; Gene; Receptor; Allele; Genotype; Locus (genetics)","score_opus":0.040898368476006024,"score_gpt":0.2928792424204242,"score_spread":0.25198087394441815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7110886033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99825555,0.0007184769,0.00012985317,0.00005266374,0.000010332937,0.0000058300975,0.00016080654,0.0000057823063,0.0006606512],"genre_scores_gemma":[0.99888843,0.00032176037,0.00016755931,0.000035524998,0.000025381069,0.000012552036,0.00018145719,0.0000026383918,0.00036474102],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998388,0.00006295712,0.000012152251,0.000041898387,0.000024676332,0.00001944997],"domain_scores_gemma":[0.9997192,0.00008319527,0.00009172362,0.000021214782,0.000024549123,0.000060059185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021537284,0.00020779314,0.00021431236,0.0003822245,0.00029861822,0.00021065878,0.0001187404,0.00030297195,0.0024900874],"category_scores_gemma":[0.00058974593,0.0001223441,0.00013075932,0.00045971634,0.00023532646,0.00013923056,0.00015519635,0.0002532906,0.00036368318],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008636471,0.00019985168,0.98298115,0.00006417489,0.00010151488,0.00081216753,0.00020190225,0.00007428589,0.008948599,0.000078548605,0.00029959975,0.005374526],"study_design_scores_gemma":[0.000017307762,0.0004235193,0.9964026,0.000013113754,0.000046778536,0.001806726,0.00012013808,0.00009363513,0.00040522713,0.00010575983,0.00056039676,0.0000048462944],"about_ca_topic_score_codex":0.0005971011,"about_ca_topic_score_gemma":0.00028250905,"teacher_disagreement_score":0.0024900874,"about_ca_system_score_codex":0.00006177242,"about_ca_system_score_gemma":0.00008111764,"threshold_uncertainty_score":0.008330107},"labels":[],"label_agreement":null},{"id":"W7112683640","doi":"","title":"UP-REGULATION OF TOLL-LIKE RECEPTORS (TLR) 6, 7 AND 8 IN KELOID SCARS: DOES KELOID DISEASE REFLECT AN ABNORMAL INNATE IMMUNE RESPONSE TO VIRAL INFECTION?","year":2011,"lang":"en","type":"article","venue":"Research Explorer (The University of Manchester)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Innate immune system; Keloid; Disease; Immune system; Receptor; Pattern recognition receptor","score_opus":0.041355002682677285,"score_gpt":0.2754171267159933,"score_spread":0.234062124033316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112683640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965833,0.0023184502,0.00037447413,0.00013369041,0.000022074797,0.0000056322865,0.000045104014,0.000011443716,0.0005058142],"genre_scores_gemma":[0.99801034,0.0008855563,0.0003059085,0.000051367184,0.000030606094,0.000011154518,0.000059842787,0.0000033766014,0.00064199185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998369,0.000034432313,0.000021891288,0.000016980008,0.000038960923,0.000050719875],"domain_scores_gemma":[0.99975985,0.000045411885,0.00007971014,0.000025429435,0.000039096118,0.00005045344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002734225,0.00015979381,0.00031841427,0.0004967386,0.00018290401,0.0003696178,0.00020947105,0.0005139244,0.0018926475],"category_scores_gemma":[0.00042516194,0.0001633857,0.00020675793,0.0002055228,0.00044144562,0.00052569207,0.00024555976,0.0004980025,0.00050449796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032927739,0.000119519085,0.057641823,0.00031112166,0.000032600994,0.0040331963,0.00038541606,0.00008954896,0.91636205,0.00035538664,0.00026154958,0.017115045],"study_design_scores_gemma":[0.00019765965,0.0021540357,0.6312934,0.00011204501,0.00016764428,0.032089155,0.0024495681,0.0011543079,0.3247987,0.0013870246,0.004142631,0.000053814103],"about_ca_topic_score_codex":0.00013783564,"about_ca_topic_score_gemma":0.00014114812,"teacher_disagreement_score":0.0018926475,"about_ca_system_score_codex":0.00015293885,"about_ca_system_score_gemma":0.00008684786,"threshold_uncertainty_score":0.006331563},"labels":[],"label_agreement":null},{"id":"W7132093122","doi":"","title":"Structure of a novel lipid A obtained from the lipopolysaccharides of Caulobacer crescentus","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Caulobacter crescentus; Bacteria; Lipid A; Peptide sequence; Protein structure","score_opus":0.014074206261778016,"score_gpt":0.21985396686302747,"score_spread":0.20577976060124945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132093122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99210757,0.0016341743,0.0031618762,0.00026297217,0.00013113664,0.00007446929,0.0006950902,0.00003277775,0.0018999213],"genre_scores_gemma":[0.98771966,0.0010620626,0.00431056,0.00016354886,0.000049550927,0.000031854663,0.002296143,0.000017505725,0.004349204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99995387,0.00000921251,0.0000034307695,0.000011429716,0.000007338649,0.000014638054],"domain_scores_gemma":[0.9997763,0.000038361664,0.00005607626,0.00002289426,0.000043660075,0.00006265837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013427807,0.00070420164,0.00019488318,0.0004341711,0.0004781243,0.00034452096,0.0005170526,0.0005332278,0.0015506468],"category_scores_gemma":[0.00025207375,0.00013795185,0.0004208431,0.00033844193,0.0005119867,0.0003492879,0.0003794399,0.0009244472,0.00049182546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015776694,0.00008005363,0.0006109009,0.0001553952,0.000039792798,0.0015905208,0.00009902977,0.00057908485,0.990672,0.0005369958,0.00015851195,0.0039000052],"study_design_scores_gemma":[0.0003403315,0.0033078627,0.020853065,0.000099165256,0.00020047318,0.0016073799,0.00054297055,0.0035920006,0.9522182,0.0015053307,0.015636075,0.00009720049],"about_ca_topic_score_codex":0.0025745952,"about_ca_topic_score_gemma":0.0009144224,"teacher_disagreement_score":0.0025745952,"about_ca_system_score_codex":0.00043557823,"about_ca_system_score_gemma":0.0006210334,"threshold_uncertainty_score":0.005187452},"labels":[],"label_agreement":null},{"id":"W7132247228","doi":"","title":"Chromosomal and plasmid-encoded enzymes are required for assembly of the R3-type core oligosaccharide in the lipopolysaccharide of Escherichia coli 0157:H7","year":2004,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Escherichia coli; Enzyme; Lipopolysaccharide; Core (optical fiber); Oligosaccharide; Enterobacteriaceae","score_opus":0.022451140201233826,"score_gpt":0.25297787904016733,"score_spread":0.23052673883893351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132247228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99530196,0.00067262974,0.001982356,0.00017904176,0.000050277013,0.000019655705,0.00024358155,0.000119250915,0.0014311591],"genre_scores_gemma":[0.99109167,0.00033452018,0.0026355272,0.000050381313,0.00001526876,0.000016737145,0.0017070286,0.00014152282,0.004007478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9995486,0.00007555169,0.000042512784,0.000054578224,0.00016890519,0.00010976667],"domain_scores_gemma":[0.99856585,0.00033249386,0.00043965896,0.00022381627,0.00021723223,0.00022098902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036723842,0.0006082281,0.00046239904,0.0004486961,0.00023688786,0.0012010661,0.00034090236,0.00048639052,0.0028786247],"category_scores_gemma":[0.0009977891,0.00039978226,0.00038804632,0.00033056593,0.00060840865,0.0005402762,0.00066086015,0.0010619846,0.0024584876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035557133,0.00007844151,0.0013159629,0.00005529871,0.000010097687,0.00025997264,0.000058921116,0.000030902425,0.9949699,0.0002006068,0.00013265168,0.0025316474],"study_design_scores_gemma":[0.00003491047,0.00024320855,0.03336118,0.000016198039,0.000028558821,0.0009019273,0.0003410143,0.0007091397,0.9614249,0.00014926025,0.0027701748,0.000019563025],"about_ca_topic_score_codex":0.0013805651,"about_ca_topic_score_gemma":0.0013947159,"teacher_disagreement_score":0.0028786247,"about_ca_system_score_codex":0.00041363243,"about_ca_system_score_gemma":0.00068127725,"threshold_uncertainty_score":0.009630024},"labels":[],"label_agreement":null},{"id":"W7132472435","doi":"","title":"Structural analysis of the lipopolysaccharide from non-typeable Haemophilus influenza strain R2846","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Strain (injury); Lipopolysaccharide; Haemophilus; Bacteria; Haemophilus influenzae","score_opus":0.01845443866690145,"score_gpt":0.23795048470707061,"score_spread":0.21949604604016917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132472435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99710304,0.00052154175,0.0007217563,0.00011272749,0.00003375406,0.000019354235,0.0005696612,0.000011064222,0.00090709614],"genre_scores_gemma":[0.99336547,0.00043270356,0.0013341783,0.00008081865,0.000012980951,0.000010533589,0.0030115116,0.000013883853,0.0017377897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999217,0.0000132193145,0.0000054189286,0.000011516442,0.000023435292,0.00002475815],"domain_scores_gemma":[0.9997676,0.00004020486,0.000051071303,0.000025529891,0.00006178344,0.000053773783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000162335,0.00034215266,0.0002281938,0.00019132602,0.00020463095,0.00027203554,0.00033690946,0.00027263325,0.0016104133],"category_scores_gemma":[0.00035722,0.00010012643,0.00041275934,0.00029259155,0.00021335187,0.0002023566,0.00022104029,0.0005609358,0.0006052508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00096712133,0.00012483611,0.0024595016,0.00010523137,0.000028387618,0.0006747372,0.00018142164,0.00070147554,0.99075174,0.00029823216,0.00028304802,0.0034242887],"study_design_scores_gemma":[0.00016519516,0.0020961857,0.072083265,0.0000667608,0.0001327117,0.0018361949,0.0013279115,0.009110701,0.89672136,0.0005056213,0.015892437,0.00006180656],"about_ca_topic_score_codex":0.0033828283,"about_ca_topic_score_gemma":0.0014591202,"teacher_disagreement_score":0.0033828283,"about_ca_system_score_codex":0.00033018138,"about_ca_system_score_gemma":0.0003447465,"threshold_uncertainty_score":0.006726265},"labels":[],"label_agreement":null},{"id":"W7132601168","doi":"","title":"TLR-independent inductiion of human monocyte IL-1 by phosphoglycolipids from thermophilic bacteria","year":2008,"lang":"en","type":"article","venue":"NPARC","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Thermophile; Monocyte; Bacteria; Immune system; Microorganism","score_opus":0.01531445931550524,"score_gpt":0.22406964969396892,"score_spread":0.20875519037846368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7132601168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99156547,0.0019455785,0.00089832617,0.00039574952,0.0001720981,0.00009793218,0.001704153,0.00004215756,0.003178459],"genre_scores_gemma":[0.98683506,0.00151002,0.0015042723,0.0002805475,0.00012521663,0.000095065574,0.004066519,0.000022698801,0.0055605443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997534,0.000049499584,0.0000193495,0.000019840974,0.000036385198,0.00012153931],"domain_scores_gemma":[0.9997278,0.000100736295,0.000042470227,0.000046639616,0.00003411902,0.0000483021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028016744,0.00072756765,0.0002657611,0.00034949023,0.00023833847,0.00037719985,0.00017082553,0.0003792294,0.0042798235],"category_scores_gemma":[0.00038677326,0.00023815336,0.0006309358,0.00018517206,0.00024757066,0.00022109678,0.00043110477,0.00076086127,0.0014316794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017721042,0.00008581767,0.0004445011,0.00011696551,0.000006744947,0.00023230155,0.00005048917,0.00004807975,0.99495304,0.00008052534,0.00020948246,0.0019998564],"study_design_scores_gemma":[0.00015803611,0.00068344374,0.029476808,0.000036362246,0.00002862127,0.0003580772,0.00011809513,0.0004247982,0.96605843,0.000093648036,0.00255333,0.00001033655],"about_ca_topic_score_codex":0.0011661741,"about_ca_topic_score_gemma":0.001646854,"teacher_disagreement_score":0.0042798235,"about_ca_system_score_codex":0.00028823852,"about_ca_system_score_gemma":0.0003811985,"threshold_uncertainty_score":0.014317453},"labels":[],"label_agreement":null},{"id":"W7136161570","doi":"10.6084/m9.figshare.4456550","title":"Additional file 4 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Systemic inflammatory response syndrome; MEDLINE; Disease; Immune system","score_opus":0.021985786878097532,"score_gpt":0.2816245149760677,"score_spread":0.2596387280979702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136161570","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012252289,0.0008293283,0.00019042035,0.0006158999,0.00015839393,0.00048381765,0.99560946,0.00017095724,0.0018192647],"genre_scores_gemma":[0.011400744,0.010080321,0.009303872,0.004948811,0.0009911436,0.013127214,0.90383124,0.000981806,0.045334805],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.9986975,0.0002627784,0.000456077,0.00019768684,0.00024502518,0.00014083702],"domain_scores_gemma":[0.9512641,0.039657056,0.0027370572,0.0007527676,0.0050850906,0.00050403073],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003786213,0.0015457636,0.0021536446,0.007032493,0.0008282725,0.002517708,0.0022689288,0.0018780071,0.8542941],"category_scores_gemma":[0.044762112,0.00087808346,0.0034139275,0.008531462,0.00046915177,0.0037613413,0.0018308695,0.0013123101,0.07995323],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006871447,0.000045644385,0.0009826559,0.17836326,0.00028981065,0.00013882392,0.00017605981,0.0003238061,0.000166266,0.001168499,0.7972171,0.020441],"study_design_scores_gemma":[0.003946521,0.00020096559,0.01372978,0.15255739,0.0016575044,0.00063051056,0.0006600364,0.00045689088,0.0005407437,0.0058741365,0.8195886,0.00015691626],"about_ca_topic_score_codex":0.012331064,"about_ca_topic_score_gemma":0.018472295,"teacher_disagreement_score":0.8542941,"about_ca_system_score_codex":0.0023540212,"about_ca_system_score_gemma":0.0052020242,"threshold_uncertainty_score":0.20783174},"labels":[],"label_agreement":null},{"id":"W7136352992","doi":"10.6084/m9.figshare.4456568","title":"Additional file 1 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; MEDLINE; Systemic inflammatory response syndrome; Inflammation; Disease","score_opus":0.022213632351613624,"score_gpt":0.2816039210705994,"score_spread":0.2593902887189858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136352992","genre_codex":"dataset","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018447226,0.0019482066,0.0002274054,0.00053520885,0.0001183961,0.00094564084,0.9939612,0.00016522226,0.0019143011],"genre_scores_gemma":[0.013625083,0.02410451,0.0147708,0.0048148576,0.00081957976,0.033409614,0.8669836,0.0010322696,0.040439606],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.99832803,0.00033854676,0.0006863531,0.00024414324,0.00024402358,0.00015899404],"domain_scores_gemma":[0.95259297,0.038877532,0.0031761194,0.000574705,0.0043105595,0.000468198],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004317657,0.0020696041,0.0032788618,0.012778525,0.00093516934,0.0027955915,0.0023744858,0.0019229413,0.7927307],"category_scores_gemma":[0.04447652,0.0011317995,0.004390379,0.015646227,0.0005491624,0.003893463,0.0023315318,0.0013549377,0.056108147],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067519356,0.000050913965,0.0008685948,0.5304682,0.00058306934,0.00014809793,0.00025787955,0.00038686916,0.0002414105,0.001276994,0.44514638,0.019896355],"study_design_scores_gemma":[0.0046373587,0.0002915194,0.012630269,0.33278024,0.0042547267,0.0006618876,0.0008499834,0.00054057455,0.00057900185,0.0050546587,0.63753754,0.00018216755],"about_ca_topic_score_codex":0.013547804,"about_ca_topic_score_gemma":0.025695331,"teacher_disagreement_score":0.7927307,"about_ca_system_score_codex":0.0028124738,"about_ca_system_score_gemma":0.007039126,"threshold_uncertainty_score":0.29564446},"labels":[],"label_agreement":null},{"id":"W7136430980","doi":"10.6084/m9.figshare.4456562","title":"Additional file 2 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; MEDLINE; Systemic inflammatory response syndrome; Inflammation; Disease","score_opus":0.021415623076146577,"score_gpt":0.28101052862646697,"score_spread":0.2595949055503204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136430980","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013432647,0.0018633305,0.00020440973,0.00070933305,0.00019531847,0.00074712664,0.99407357,0.00017491945,0.0018976105],"genre_scores_gemma":[0.011711762,0.023561355,0.012466119,0.0058270185,0.0012101195,0.022390405,0.87837017,0.001022091,0.04344093],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99821305,0.00035928003,0.0006688885,0.00025208908,0.00034150647,0.00016521562],"domain_scores_gemma":[0.9449473,0.043428525,0.0039397194,0.00077686616,0.006335,0.0005726381],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0043307124,0.0019830924,0.003125141,0.010199287,0.0008614615,0.0030924468,0.0026006633,0.0021328675,0.8176192],"category_scores_gemma":[0.052959763,0.0011097651,0.0047261035,0.012208719,0.00050181866,0.0041850726,0.0021918798,0.0015250136,0.06611094],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006644498,0.000042159445,0.0007854233,0.4368495,0.00052640913,0.00012608386,0.00017676948,0.00034099666,0.00017630984,0.0011707187,0.53796506,0.021176128],"study_design_scores_gemma":[0.003988606,0.00020087475,0.010334212,0.33108655,0.0031768265,0.0004905615,0.00058632257,0.00040693497,0.00045625825,0.004842301,0.64427567,0.00015499545],"about_ca_topic_score_codex":0.013786959,"about_ca_topic_score_gemma":0.022082249,"teacher_disagreement_score":0.8176192,"about_ca_system_score_codex":0.0028700747,"about_ca_system_score_gemma":0.006986883,"threshold_uncertainty_score":0.260144},"labels":[],"label_agreement":null},{"id":"W7136548932","doi":"10.6084/m9.figshare.4456556","title":"Additional file 6 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Inflammation; MEDLINE; Inflammatory response; Immune system","score_opus":0.02180859092929772,"score_gpt":0.2813022206252419,"score_spread":0.2594936296959442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136548932","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013941324,0.001281988,0.0003147769,0.0009390377,0.0002381326,0.0006858006,0.99344605,0.0002543813,0.0027003463],"genre_scores_gemma":[0.012641921,0.014942448,0.012204024,0.0061197486,0.0013028915,0.014514905,0.8739017,0.0012323024,0.06314011],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.99883455,0.00027331765,0.00037109974,0.00016756449,0.00023768975,0.00011576519],"domain_scores_gemma":[0.9575818,0.034562215,0.0021504972,0.0007385401,0.0044880775,0.00047892236],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0042491625,0.0013046744,0.0018687797,0.005050551,0.00070761336,0.002266852,0.0021498124,0.001726478,0.85652596],"category_scores_gemma":[0.04133545,0.00076964125,0.0028792885,0.0063451505,0.00041874617,0.0032649515,0.0015528972,0.0012542743,0.09214676],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006945237,0.000047436413,0.0006390574,0.12877238,0.0002314497,0.000096049545,0.00013373123,0.00024886354,0.0001525004,0.0011316906,0.84284145,0.02501087],"study_design_scores_gemma":[0.0031127876,0.00019196825,0.0089434665,0.10894434,0.0012663369,0.00045582716,0.00045369862,0.00034022625,0.0005275682,0.0051494823,0.8704998,0.00011440232],"about_ca_topic_score_codex":0.009545847,"about_ca_topic_score_gemma":0.014648188,"teacher_disagreement_score":0.85652596,"about_ca_system_score_codex":0.0021099146,"about_ca_system_score_gemma":0.00501403,"threshold_uncertainty_score":0.20464832},"labels":[],"label_agreement":null},{"id":"W7139756705","doi":"","title":"The Role of ALPK1-TIFA Signalling in Intestinal Epithelial Cells","year":2025,"lang":"","type":"dissertation","venue":"TSpace (University of Toronto)","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Innate immune system; Immune system; Signalling; Innate lymphoid cell; Intestinal epithelium; Immunity; Signal transduction; Interleukin 22; Classical complement pathway","score_opus":0.005947116542320213,"score_gpt":0.21478640653134795,"score_spread":0.20883928998902773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7139756705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8262731,0.12149515,0.012428982,0.004973831,0.0006743467,0.000088183486,0.0020647026,0.0004032207,0.0315985],"genre_scores_gemma":[0.96179944,0.020945093,0.0019943318,0.000434991,0.00009841486,0.000057495556,0.0010776042,0.000027939495,0.013564625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997681,0.000032736407,0.000010399763,0.00003736904,0.000061624996,0.00008980589],"domain_scores_gemma":[0.99987197,0.00001381928,0.0000334043,0.000010405685,0.000030928884,0.00003954096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025651976,0.00038358528,0.00026438248,0.00043436437,0.0004487716,0.0011288535,0.00031788042,0.0005923909,0.0018716948],"category_scores_gemma":[0.00020765587,0.0001409535,0.0006055959,0.0002484785,0.0003906173,0.0006165404,0.00064890925,0.0011894244,0.00089054444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087494036,0.000051634503,0.0015493034,0.0009448774,0.000039951454,0.00057685684,0.00020487035,0.00061480305,0.9647131,0.0049195336,0.00100731,0.024502916],"study_design_scores_gemma":[0.00012630774,0.0010942424,0.0744118,0.00040971077,0.0001236708,0.0023932282,0.0015929615,0.004185272,0.78813314,0.004447765,0.12297797,0.000104006176],"about_ca_topic_score_codex":0.0009990633,"about_ca_topic_score_gemma":0.00092592946,"teacher_disagreement_score":0.0018716948,"about_ca_system_score_codex":0.0011463363,"about_ca_system_score_gemma":0.00043368008,"threshold_uncertainty_score":0.008317232},"labels":[],"label_agreement":null},{"id":"W7480551","doi":"10.4049/jimmunol.182.supp.135.20","title":"Essential role of albumin in CD14-independent activation of MD-2/TLR4 by endotoxin (135.20)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Immunovaccine (Canada)","funders":"","keywords":"TRIF; TLR4; Albumin; Chemistry; CD14; Receptor; Monomer; Divalent; Biochemistry; Cell biology; Molecular biology; Toll-like receptor; Biology; Innate immune system; Organic chemistry","score_opus":0.003741163417624317,"score_gpt":0.2153832467050936,"score_spread":0.21164208328746928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7480551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99457353,0.0006237039,0.0037732434,0.000084640254,0.0000129047985,0.00001310297,0.0001446868,0.00006257256,0.00071160105],"genre_scores_gemma":[0.9972529,0.00009089758,0.0013850554,0.000026882215,0.0000036997626,0.000009036872,0.00017740285,0.0000124120925,0.0010417837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980074,0.000069498696,0.000021365244,0.000022320439,0.000035800596,0.000050349034],"domain_scores_gemma":[0.9997454,0.0000468623,0.00007273197,0.000029853894,0.00004845576,0.000056673543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002673273,0.00025539548,0.00015608442,0.00015999032,0.00012999921,0.00031141256,0.00018110166,0.00027489095,0.0016262037],"category_scores_gemma":[0.000312894,0.00011664696,0.00017238424,0.000085402025,0.00019117063,0.00013938318,0.00038791873,0.00019483022,0.0006767826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017662301,0.000019475918,0.00023648163,0.00002772107,0.0000020862344,0.0000621817,0.000007462526,0.000027437854,0.99859804,0.00010696301,0.000023010785,0.0007123085],"study_design_scores_gemma":[0.000025325873,0.00017095593,0.006683153,0.0000066303182,0.0000078780695,0.00037491985,0.000017043996,0.0007461681,0.9900317,0.000080614205,0.001851456,0.000004085304],"about_ca_topic_score_codex":0.0004436858,"about_ca_topic_score_gemma":0.0002644357,"teacher_disagreement_score":0.0016262037,"about_ca_system_score_codex":0.00025375906,"about_ca_system_score_gemma":0.00012221106,"threshold_uncertainty_score":0.0054401755},"labels":[],"label_agreement":null},{"id":"W74977902","doi":"10.1016/s0741-8329(00)00100-2","title":"Cellular immunity after ethanol exposure and burn injury","year":2000,"lang":"en","type":"article","venue":"Alcohol","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Alcohol Abuse and Alcoholism; National Institutes of Health; McGill University","keywords":"Splenocyte; Ethanol; Immune system; Cellular immunity; Immunity; Immunology; Burn injury; Macrophage; Spleen; Medicine; Total body surface area; Internal medicine; Endocrinology; Pharmacology; Chemistry; In vitro; Biochemistry; Surgery","score_opus":0.008060128398300772,"score_gpt":0.2256203259314834,"score_spread":0.21756019753318262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W74977902","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975673,0.0014324454,0.00014485905,0.00007858578,0.000039676845,0.000012064871,0.00004404132,0.000006715259,0.0006743729],"genre_scores_gemma":[0.997569,0.00062521413,0.000051220537,0.000054174117,0.000026572612,0.000011155105,0.000087673354,0.000001961399,0.0015730237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99983525,0.000036127287,0.000008683633,0.000012389985,0.00003117472,0.000076276934],"domain_scores_gemma":[0.9998066,0.000022927465,0.000047819907,0.000025517646,0.00003238905,0.000064744716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025280108,0.0002723041,0.00040630417,0.0004785793,0.00032169928,0.00033547627,0.00016691168,0.0005013688,0.002174931],"category_scores_gemma":[0.0002535223,0.00016954764,0.00038471178,0.00021441025,0.00045735302,0.0003730443,0.00027457846,0.0006844195,0.00027273205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.080070704,0.0017302454,0.04841518,0.000386058,0.0002809256,0.004367932,0.0005074726,0.00042755943,0.83721983,0.00073294167,0.00052916585,0.025331996],"study_design_scores_gemma":[0.00025936097,0.0077713365,0.62465656,0.00007977037,0.0002682832,0.0027226233,0.0013888716,0.0008640523,0.3584763,0.0007258463,0.0027561227,0.00003085819],"about_ca_topic_score_codex":0.001275639,"about_ca_topic_score_gemma":0.0019108444,"teacher_disagreement_score":0.002174931,"about_ca_system_score_codex":0.00046745903,"about_ca_system_score_gemma":0.0002970848,"threshold_uncertainty_score":0.007275939},"labels":[],"label_agreement":null},{"id":"W75527843","doi":"10.4049/jimmunol.182.supp.39.38","title":"Neonatal Tolerization with Bacterial Antigens Stimulates an Expansion of CD11b+ Leukocytes with Inhibitory Activity in IL-10 Gene-Deficient Mice (39.38)","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Spleen; Antigen; Immune system; Biology; Immunology; Cytokine; Integrin alpha M; Microbiology","score_opus":0.007159693792436144,"score_gpt":0.21483816515805487,"score_spread":0.20767847136561873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W75527843","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9953655,0.000786418,0.0020286299,0.000099063975,0.00002706043,0.00004661994,0.0005347968,0.000110220615,0.0010017036],"genre_scores_gemma":[0.98948413,0.0010688847,0.0032141353,0.00017274063,0.000032786178,0.00014218433,0.00091697864,0.000094223644,0.00487394],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99962616,0.00008385525,0.000039234492,0.00007040307,0.00007720615,0.00010312847],"domain_scores_gemma":[0.9993777,0.00009470492,0.00020999247,0.00006383511,0.000029679402,0.00022399932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003154282,0.00076397014,0.00037307933,0.00061785715,0.00013312175,0.0004016552,0.0002118403,0.00048476615,0.002288857],"category_scores_gemma":[0.00028101812,0.00038674267,0.0002970381,0.00015188103,0.0003655494,0.00021223798,0.00030023456,0.0011812594,0.0009057951],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010964419,0.000034712957,0.00018373982,0.00002023733,0.0000015076911,0.000052475327,0.000010138608,0.0000137206225,0.99920017,0.000026648775,0.000017861325,0.00032917593],"study_design_scores_gemma":[0.00009854575,0.0015429328,0.015260912,0.00003659773,0.00002965004,0.0011177933,0.00006509055,0.00068823324,0.9790102,0.0000724758,0.0020684286,0.000009176984],"about_ca_topic_score_codex":0.00026253954,"about_ca_topic_score_gemma":0.00041873302,"teacher_disagreement_score":0.002288857,"about_ca_system_score_codex":0.0002754495,"about_ca_system_score_gemma":0.00017236812,"threshold_uncertainty_score":0.007656932},"labels":[],"label_agreement":null},{"id":"W777871293","doi":"","title":"Toll-like receptor 3 is expressed in all layers of the human retina","year":2014,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Retina; Toll-like receptor; Toll; Receptor; Cell biology; Chemistry; Neuroscience; Biology; Immunology; Innate immune system; Biochemistry","score_opus":0.03488652399634679,"score_gpt":0.3178733277483678,"score_spread":0.282986803752021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W777871293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98189765,0.010826443,0.0029472576,0.00022378349,0.000029936442,0.000020377163,0.0007302871,0.000100759724,0.003223441],"genre_scores_gemma":[0.9943381,0.0021287533,0.001530043,0.000067318004,0.000013587507,0.000010644126,0.0003184267,0.000010542356,0.0015824969],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998864,0.000020200845,0.000011368863,0.000019701283,0.000034990822,0.000027264916],"domain_scores_gemma":[0.9998586,0.000018889798,0.00005394135,0.000012814088,0.000038321527,0.000017333228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017976316,0.00018556285,0.00018460336,0.0005676329,0.0001750475,0.00051597954,0.00010191185,0.00020041551,0.0010176896],"category_scores_gemma":[0.0003000743,0.00015068488,0.00023748443,0.00034872975,0.000188411,0.00018359472,0.00022323942,0.0002332726,0.00023595935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006033752,0.000024763636,0.043781742,0.00022176304,0.00010458654,0.0007681095,0.00031896413,0.00016694785,0.91715664,0.00048030817,0.00076565286,0.035607044],"study_design_scores_gemma":[0.00006462895,0.00040977262,0.7137685,0.00017988443,0.00028445743,0.009998022,0.0017535974,0.0012215179,0.24930944,0.0012944171,0.021657199,0.000058611833],"about_ca_topic_score_codex":0.0029739353,"about_ca_topic_score_gemma":0.0027521923,"teacher_disagreement_score":0.0029739353,"about_ca_system_score_codex":0.0002333825,"about_ca_system_score_gemma":0.0003003442,"threshold_uncertainty_score":0.0059132576},"labels":[],"label_agreement":null},{"id":"W802300164","doi":"10.1371/journal.pone.0132061","title":"Age-Related Gene Expression Differences in Monocytes from Human Neonates, Young Adults, and Older Adults","year":2015,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, University of California Los Angeles; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Cancer Institute; Children's Hospital Foundation; National Institutes of Health; Michael Smith Health Research BC; BC Children's Hospital","keywords":"Biology; Gene expression; Gene; Young adult; Transcriptome; Context (archaeology); Innate immune system; Immunology; Immune system; Monocyte; Gene expression profiling; Genetics; Medicine; Internal medicine","score_opus":0.02731215793218775,"score_gpt":0.2111121018193191,"score_spread":0.18379994388713136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W802300164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99510103,0.001814901,0.0007760048,0.000053539832,0.000018650766,0.000018811266,0.0015778354,0.0000098064675,0.0006294649],"genre_scores_gemma":[0.9919093,0.0019111044,0.0017890114,0.00021332348,0.000036066755,0.000104212035,0.002771413,0.000012206749,0.0012532827],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998666,0.000014809762,0.000015289175,0.000045830773,0.000028571649,0.00002884755],"domain_scores_gemma":[0.9998369,0.000031169602,0.000044135166,0.00001518132,0.000040016377,0.000032495318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018595446,0.00013720934,0.00024016085,0.00042967024,0.0002065611,0.00030439353,0.00007785529,0.00022044615,0.0014241616],"category_scores_gemma":[0.000466277,0.00013108904,0.00014041919,0.00035457118,0.00011296497,0.00012589523,0.00022320516,0.00021258391,0.00040925696],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002879371,0.000083134255,0.27610782,0.00035750636,0.00009637233,0.0013179535,0.0019346444,0.00016585777,0.6742127,0.00023077571,0.0009463536,0.041667584],"study_design_scores_gemma":[0.000014132845,0.00036515747,0.9708812,0.000039681738,0.000055373446,0.0014699884,0.0008380177,0.00018301867,0.022862297,0.00016682515,0.003106317,0.000017931015],"about_ca_topic_score_codex":0.00074532477,"about_ca_topic_score_gemma":0.0010673266,"teacher_disagreement_score":0.0014241616,"about_ca_system_score_codex":0.00008620436,"about_ca_system_score_gemma":0.00010707435,"threshold_uncertainty_score":0.0047643185},"labels":[],"label_agreement":null},{"id":"W958939730","doi":"","title":"Hematological evaluation and oxidative metabolism of neutrophils in Quarter horses between 12 and 16 months of age.","year":2000,"lang":"en","type":"article","venue":"Veterinária notícias/Veterinária Notícias","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Oxidative metabolism; Oxidative phosphorylation; Quarter (Canadian coin); Energy metabolism; Physiology; Medicine; Metabolism; Biology; Internal medicine; Biochemistry; Geography","score_opus":0.03094603355211932,"score_gpt":0.28338057772666714,"score_spread":0.2524345441745478,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W958939730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987262,0.000611436,0.00003837729,0.00003468207,0.0000073811975,0.000013168362,0.0002083176,0.0000029456517,0.00035757807],"genre_scores_gemma":[0.99862885,0.00034645287,0.00008460537,0.000025758385,0.000010777468,0.000015323114,0.0003121838,0.000001072825,0.0005749671],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998254,0.000034902238,0.000019782961,0.000036395904,0.000026818418,0.00005665457],"domain_scores_gemma":[0.99966156,0.000026138427,0.00011587452,0.000012324495,0.000069399415,0.00011481599],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029211884,0.00027657897,0.00036886238,0.00076632015,0.00037253756,0.00027606235,0.00017946174,0.00065493747,0.00085541065],"category_scores_gemma":[0.00074025866,0.0001647128,0.00022317452,0.00035800514,0.0002552976,0.00034118412,0.0002471947,0.00047971634,0.00025307818],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003814367,0.00046185814,0.965407,0.00008300695,0.000042510987,0.0031662472,0.0005838882,0.00007089724,0.018105073,0.000032402397,0.00037147745,0.007861108],"study_design_scores_gemma":[0.0000060251514,0.0013172472,0.99541914,0.000012517797,0.00001724544,0.0014904509,0.00035119522,0.000044602202,0.0010606664,0.000012944279,0.00026375838,0.000004148449],"about_ca_topic_score_codex":0.0037497499,"about_ca_topic_score_gemma":0.00448318,"teacher_disagreement_score":0.0037497499,"about_ca_system_score_codex":0.00038136463,"about_ca_system_score_gemma":0.00021198357,"threshold_uncertainty_score":0.0074558854},"labels":[],"label_agreement":null},{"id":"W972614661","doi":"10.1016/j.vaccine.2015.07.070","title":"Reduction of avian influenza virus shedding by administration of Toll-like receptor ligands to chickens","year":2015,"lang":"en","type":"article","venue":"Vaccine","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Animal Health Institute; University of Guelph","funders":"Agriculture and Agri-Food Canada; Ontario Ministry of Agriculture, Food and Rural Affairs; University of Guelph","keywords":"Viral shedding; TLR2; Virus; Biology; Virology; Receptor; Interferon; Toll-like receptor; Immune system; Influenza A virus subtype H5N1; Innate immune system; Influenza A virus; Microbiology; Immunology; Genetics","score_opus":0.016036335808585662,"score_gpt":0.26888318267663963,"score_spread":0.252846846868054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W972614661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987997,0.00032787875,0.00031897152,0.00011422247,0.000041204723,0.000018861769,0.0000578235,0.000028511426,0.0002928351],"genre_scores_gemma":[0.9974468,0.00021853491,0.00053866254,0.00006821412,0.000024293306,0.000021233298,0.00011806143,0.000008797965,0.0015555065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998578,0.000032929256,0.000009935304,0.00003251779,0.000016609363,0.000050343504],"domain_scores_gemma":[0.99977547,0.000050375522,0.000057176432,0.000021205416,0.00002612964,0.00006965114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020870075,0.0004020657,0.00041222732,0.00022349243,0.00018113687,0.00028461724,0.00024573097,0.00058640423,0.0010552553],"category_scores_gemma":[0.00029276652,0.00019170676,0.00023528653,0.000060336944,0.00044702707,0.00031018496,0.00012398903,0.0009439636,0.00022575402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007248996,0.0007403819,0.00053928554,0.00010183348,0.000018409464,0.000046919606,0.00006481344,0.00022509901,0.9852305,0.00008448655,0.00011584718,0.005583406],"study_design_scores_gemma":[0.00074960286,0.026088912,0.006687308,0.000028485829,0.000070008035,0.00014582538,0.00013202854,0.001502689,0.9625208,0.000110949324,0.0019459709,0.000017498603],"about_ca_topic_score_codex":0.0012162176,"about_ca_topic_score_gemma":0.0015440051,"teacher_disagreement_score":0.0012162176,"about_ca_system_score_codex":0.00033758013,"about_ca_system_score_gemma":0.00036014206,"threshold_uncertainty_score":0.0035301447},"labels":[],"label_agreement":null},{"id":"W98309073","doi":"10.1096/fasebj.22.1_supplement.846.20","title":"The role of GITR in the anti‐influenza CD8 memory T cell response","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Muscular Dystrophy Canada; University of Toronto","funders":"","keywords":"Immunology; CD8; Tumor necrosis factor alpha; Cytotoxic T cell; T cell; Cytokine; Biology; Memory T cell; Antigen; Immune system; In vitro","score_opus":0.011837890857010747,"score_gpt":0.226147540376437,"score_spread":0.21430964951942624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W98309073","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955575,0.0017410856,0.0006794623,0.0001398154,0.000020618563,0.00002005499,0.00012361466,0.00008774383,0.0016300526],"genre_scores_gemma":[0.9972174,0.0005529439,0.00069627573,0.00008161606,0.000015351665,0.000022765385,0.00016470364,0.000011572814,0.001237251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979204,0.000034441146,0.000012696606,0.00003533053,0.000037903475,0.000087599314],"domain_scores_gemma":[0.99989474,0.000008149535,0.00002964411,0.000013994329,0.000011910315,0.000041562445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015548771,0.00063145376,0.00027284466,0.00029727575,0.00018925489,0.00032864444,0.00034666268,0.0006266055,0.0012974871],"category_scores_gemma":[0.00015484795,0.00024467704,0.0003172392,0.00007429413,0.0003526838,0.00023380543,0.00032891965,0.0010912172,0.0006248623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016744212,0.000016968177,0.00036787678,0.000028141138,0.0000035122434,0.00009093405,0.000010029276,0.00006626814,0.9980546,0.00006309327,0.00002937497,0.0011017753],"study_design_scores_gemma":[0.00010764521,0.002071193,0.04300236,0.000059568778,0.00007967862,0.0021701208,0.00014224029,0.0021811859,0.94627494,0.00040597474,0.0034861488,0.000018937446],"about_ca_topic_score_codex":0.00035576613,"about_ca_topic_score_gemma":0.000451639,"teacher_disagreement_score":0.0012974871,"about_ca_system_score_codex":0.00036523349,"about_ca_system_score_gemma":0.00021133394,"threshold_uncertainty_score":0.00434047},"labels":[],"label_agreement":null},{"id":"W991149868","doi":"10.1096/fasebj.22.2_supplement.557","title":"Lipoteichoic acid is able to inhibit leukocyte recruitment in vivo","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lipoteichoic acid; TLR2; TRIF; Chemokine; Receptor; TLR4; In vivo; Lipopolysaccharide; Inflammation; Toll-like receptor; Cell biology; Immune system; Innate immune system; Chemistry; Cytokine; Microbiology; Immunology; Biology; Staphylococcus aureus; Biochemistry; Bacteria","score_opus":0.041316639154354816,"score_gpt":0.2636881515817164,"score_spread":0.22237151242736156,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W991149868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9841717,0.0060646497,0.0053420905,0.0002944982,0.00014596248,0.000086981476,0.00036782553,0.00019192079,0.0033343344],"genre_scores_gemma":[0.987326,0.0029079278,0.0033849145,0.00025333336,0.00009833471,0.00011696417,0.0011798191,0.00005726205,0.0046756165],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99977547,0.00006983045,0.000015547792,0.000027767179,0.00004690386,0.000064451306],"domain_scores_gemma":[0.9997094,0.000090519876,0.00005752981,0.00004599458,0.000024472936,0.00007199351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030237404,0.0005977782,0.00042260395,0.00026557012,0.00015108472,0.00037596512,0.00023508583,0.00041137528,0.0016742861],"category_scores_gemma":[0.00031134783,0.00018868336,0.0002532167,0.00014858169,0.0002483404,0.00022343727,0.00018859774,0.00075750984,0.00081993756],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001067087,0.00030874318,0.00010560999,0.00008419192,0.0000149088355,0.00005944529,0.000015714495,0.00016147169,0.99502987,0.0001377209,0.00013882846,0.0028764214],"study_design_scores_gemma":[0.00014627182,0.0031240757,0.0013928481,0.000012546963,0.000022344568,0.00019004534,0.0000101566175,0.0010354687,0.9917468,0.00009789387,0.0022164744,0.0000051312772],"about_ca_topic_score_codex":0.00041928605,"about_ca_topic_score_gemma":0.00039377727,"teacher_disagreement_score":0.0016742861,"about_ca_system_score_codex":0.00018420562,"about_ca_system_score_gemma":0.00031663428,"threshold_uncertainty_score":0.0056010485},"labels":[],"label_agreement":null}]}