{"meta":{"query_hash":"787e47f240e7","filters":{"topic":"Infectious Disease Case Reports and Treatments"},"cohort_total":166,"direct_labels_cover":1,"predictions_cover":166,"exported":166,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/787e47f240e7","api":"https://metacan.xera.ac/api/v1/cohort?topic=Infectious+Disease+Case+Reports+and+Treatments"},"results":[{"id":"W103944947","doi":"","title":"Xanthogranulomatous pyelonephritis in a 1-year old boy.","year":2005,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital","funders":"","keywords":"Medicine; Xanthogranulomatous pyelonephritis; Hydronephrosis; Pathological; Chronic pyelonephritis; Calcification; Lesion; Kidney; Nephrectomy; Radiology; Surgery; Urinary system; Pathology; Internal medicine","score_opus":0.010697760806446112,"score_gpt":0.22664049567783723,"score_spread":0.21594273487139112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W103944947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96494836,0.00050577737,0.0000027540273,0.0006753413,0.000090805326,0.0008479173,0.000008207938,0.00011035342,0.032810465],"genre_scores_gemma":[0.99627054,0.000105771156,0.00009939547,0.0005001132,0.0001786077,0.0010811415,0.00001919802,0.000021824479,0.0017234278],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990345,0.000014524161,0.0002090532,0.00020728914,0.00017370169,0.000360897],"domain_scores_gemma":[0.99949706,0.000010268139,0.000041818585,0.0002054239,0.00003172677,0.00021371857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000111136025,0.00011283153,0.00020635613,0.00014337755,0.000033742697,0.00001750662,0.000021490909,0.000060574443,0.00008325738],"category_scores_gemma":[0.000047214908,0.00009822845,0.00009323241,0.00017120749,0.000022861874,0.0000718077,0.000014813061,0.000089610185,0.00006910915],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010656905,0.00085938815,0.66224355,0.000043320346,0.00008992991,0.003263095,0.000066599954,0.0000021361616,0.0000092340215,0.00021714889,0.0012225417,0.3318765],"study_design_scores_gemma":[0.0027682092,0.000025225216,0.9782684,0.000022889943,0.000070421534,0.0008433751,0.00001994989,0.000011058854,0.00022763804,0.000056276876,0.017583268,0.00010331691],"about_ca_topic_score_codex":0.00012735238,"about_ca_topic_score_gemma":0.00008602562,"teacher_disagreement_score":0.33177316,"about_ca_system_score_codex":0.00014177652,"about_ca_system_score_gemma":0.00003199614,"threshold_uncertainty_score":0.400564},"labels":[],"label_agreement":null},{"id":"W110496823","doi":"","title":"Increasing awareness of Rhodococcus equi pulmonary infection in the immunocompetent adult: a rare infection with poor prognosis.","year":2013,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Medicine; Rhodococcus equi; Clarithromycin; Pneumonia; Azithromycin; Rifampicin; Respiratory infection; Antibiotics; Tuberculosis; Meropenem; Nontuberculous mycobacteria; Immunology; Internal medicine; Mycobacterium; Respiratory system; Pathology; Microbiology; Antibiotic resistance","score_opus":0.017585630733797982,"score_gpt":0.23957668316276085,"score_spread":0.22199105242896286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W110496823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99193025,0.0001285432,0.00001995402,0.00021604644,0.000100936195,0.003929243,0.0000043162513,0.000069701164,0.0036010302],"genre_scores_gemma":[0.9906835,0.000076840166,0.00002444395,0.0001470865,0.00007447927,0.008871086,0.00006425343,0.000024060519,0.000034276356],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99858654,0.00018111886,0.000352259,0.00025099175,0.00029401915,0.00033509376],"domain_scores_gemma":[0.99908066,0.000065624554,0.00021447605,0.00024523647,0.0002952652,0.000098724675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038220253,0.00019144593,0.00030357123,0.00020632944,0.000106381216,0.0000429848,0.000035070087,0.00007536949,0.000026880898],"category_scores_gemma":[0.00011648559,0.00011380025,0.00011712777,0.00042844532,0.000068992216,0.00023513321,0.000026520325,0.0001518147,0.000006489152],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020920995,0.0011699738,0.95223445,0.00018651452,0.00015127698,0.00017494244,0.00008669418,0.000009628368,0.00010165263,0.000030051968,0.000021056885,0.045624528],"study_design_scores_gemma":[0.0010888214,0.00017525555,0.9954176,0.00015461221,0.00023699026,0.0017379897,0.00004784904,0.00006860643,0.00076639303,0.000059092108,0.00012675367,0.000120036944],"about_ca_topic_score_codex":0.021975694,"about_ca_topic_score_gemma":0.00026799922,"teacher_disagreement_score":0.04550449,"about_ca_system_score_codex":0.00019006811,"about_ca_system_score_gemma":0.00009292211,"threshold_uncertainty_score":0.98453707},"labels":[],"label_agreement":null},{"id":"W121200696","doi":"10.1503/cmaj.070524","title":"Emphysematous cystitis","year":2008,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital","funders":"","keywords":"Confusion; Medicine; Diabetes mellitus; Abdomen; Abdominal pain; Computed tomography; Abdominal computed tomography; General surgery; Radiology; Surgery; Psychology; Endocrinology; Psychoanalysis","score_opus":0.007215599624913226,"score_gpt":0.23215066781659172,"score_spread":0.2249350681916785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W121200696","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.947035,0.00029781216,0.0000264183,0.007280042,0.00076732016,0.000112356545,0.00001349825,0.00003480353,0.044432737],"genre_scores_gemma":[0.9898377,0.00024082955,0.000038330214,0.006588417,0.0011773721,0.0000044804437,0.0000136746785,0.000013402055,0.0020857758],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99827194,0.0000373039,0.00026604126,0.00009966274,0.0009927433,0.0003322949],"domain_scores_gemma":[0.99713826,0.00003074569,0.00011670861,0.0000788636,0.0003490295,0.0022863902],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027213662,0.000086359054,0.00018961068,0.00013239674,0.0003694997,0.000020958767,0.000033522312,0.00019683491,0.005789735],"category_scores_gemma":[0.0007051118,0.00007241306,0.00013416316,0.00012816883,0.000028988477,0.000059248327,0.0000040618625,0.0003918775,0.00040785025],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000073594274,0.00010434388,0.72403264,0.0000075540315,0.0003041997,0.09124741,0.000116118805,6.13785e-7,0.0000031854856,0.00009978641,0.1745292,0.009547627],"study_design_scores_gemma":[0.0019039405,0.00012050797,0.39679536,0.000081760685,0.00010088441,0.13565488,0.000046101017,0.000035057907,0.00002047188,0.00008528735,0.46502364,0.00013212397],"about_ca_topic_score_codex":0.0021542658,"about_ca_topic_score_gemma":0.0026770665,"teacher_disagreement_score":0.32723725,"about_ca_system_score_codex":0.0011697646,"about_ca_system_score_gemma":0.004945669,"threshold_uncertainty_score":0.9951191},"labels":[],"label_agreement":null},{"id":"W1489242901","doi":"10.26443/mjm.v13i1.250","title":"Severe emphysematous cystitis: Outcome after seven days of antibiotics","year":2020,"lang":"en","type":"article","venue":"McGill Journal of Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Acute Cystitis; Hemorrhagic cystitis; Antibiotics; Complication; Dysuria; Surgery; Chemotherapy; Urinary system; Conservative treatment; Internal medicine; Cyclophosphamide","score_opus":0.031500821185105,"score_gpt":0.2984184245020764,"score_spread":0.2669176033169714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1489242901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98319644,0.0015724957,0.00014623597,0.007851652,0.00054589123,0.00028067824,0.00006438322,0.00002736815,0.0063148537],"genre_scores_gemma":[0.99482834,0.00012421078,0.00025171816,0.004157978,0.0004868178,2.3461426e-7,0.000007205392,0.000026890539,0.00011660585],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99813694,0.000034016728,0.00093208003,0.00013668585,0.0005825121,0.0001777425],"domain_scores_gemma":[0.9983177,0.00004141627,0.00059924705,0.00017592698,0.00042388038,0.00044182644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001985717,0.00018024098,0.0008132977,0.00012455307,0.00004090062,0.0000026732264,0.000059520135,0.000072406,0.00040829496],"category_scores_gemma":[0.0003274412,0.00011504327,0.00021279407,0.00018415837,0.00009931485,0.00007246147,0.000027988382,0.00021869256,0.000012605764],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040661995,0.0018808563,0.81919,0.003892386,0.0033309779,0.12354805,0.0016125457,0.00007262446,0.009319874,0.0003284199,0.020089868,0.01266815],"study_design_scores_gemma":[0.07780546,0.032513138,0.5591622,0.010854302,0.018509086,0.16984794,0.002461887,0.0002811789,0.02036412,0.0008831064,0.10580551,0.0015120775],"about_ca_topic_score_codex":0.00001668923,"about_ca_topic_score_gemma":9.386583e-7,"teacher_disagreement_score":0.26002786,"about_ca_system_score_codex":0.00006750331,"about_ca_system_score_gemma":0.000078327466,"threshold_uncertainty_score":0.46913284},"labels":[],"label_agreement":null},{"id":"W151218290","doi":"","title":"Mutation and virulence assessment of chromosomal genes of Rhodococcus equi 103.","year":2007,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Mutant; Virulence; Gene; Biology; Mutation; Homologous recombination; Plasmid; Complementation; Genetics; Microbiology","score_opus":0.019831579303866875,"score_gpt":0.29929149823571777,"score_spread":0.2794599189318509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W151218290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9920413,0.00042040192,0.00030587916,0.000017489068,0.000071310445,0.00052939047,0.000007963178,0.000014171117,0.0065920777],"genre_scores_gemma":[0.9994397,0.000050485247,0.00026604722,0.000021477199,0.000037215195,0.00009514759,0.000012968996,0.0000068943027,0.00007004017],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9993241,0.00001006122,0.00023098625,0.000115928124,0.00017239388,0.0001465472],"domain_scores_gemma":[0.99950844,0.000033669257,0.00014358471,0.00011148756,0.00010117386,0.00010162338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022932296,0.000066776716,0.00016791867,0.00007152961,0.000020074858,0.0000031237794,0.00001165581,0.00003265315,0.000019091754],"category_scores_gemma":[0.000036712114,0.00005368407,0.000041863717,0.00008209174,0.000057620407,0.000042753214,0.000013884479,0.00002776222,3.1922085e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007389897,0.00047772002,0.7343124,0.00024699396,0.00018603279,0.0006448008,0.000051557647,0.0000038125188,0.0019428993,0.00030792566,0.000008784843,0.26174316],"study_design_scores_gemma":[0.0008698041,0.00010119889,0.97685575,0.000020242398,0.00016323963,0.00022030018,0.000024781448,0.000027231628,0.021543678,0.000050783954,0.00008141732,0.00004154772],"about_ca_topic_score_codex":0.00006562043,"about_ca_topic_score_gemma":0.000006060272,"teacher_disagreement_score":0.2617016,"about_ca_system_score_codex":0.000050095732,"about_ca_system_score_gemma":0.000047872625,"threshold_uncertainty_score":0.21891728},"labels":[],"label_agreement":null},{"id":"W1531353543","doi":"10.1016/j.vaccine.2005.07.050","title":"Virulence-associated protein-specific serum immunoglobulin G-isotype expression in young foals protected against pneumonia by oral immunization with virulent","year":2005,"lang":"en","type":"article","venue":"Vaccine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; Isotype; Antibody; Immunology; Virulence; Immune system; Immunoglobulin G; Pneumonia; Biology; Immunization; Immunoglobulin A; Medicine; Virology; Internal medicine; Monoclonal antibody","score_opus":0.006870114110554767,"score_gpt":0.22813966597670682,"score_spread":0.22126955186615205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1531353543","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99475163,0.001161196,0.000106722124,0.0004256439,0.000060614748,0.0023666895,0.0000365313,0.0002058093,0.00088517374],"genre_scores_gemma":[0.9974137,0.00032585982,0.00039365795,0.000079676,0.00005925599,0.00028928032,0.00049972115,0.00006817469,0.0008706561],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9980645,0.00010827235,0.0005496825,0.00045700566,0.00038459836,0.00043591877],"domain_scores_gemma":[0.99882334,0.000012009637,0.0002995445,0.000464076,0.00025159688,0.00014945329],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002030727,0.00033732492,0.0004562278,0.0001945287,0.0001672405,0.000046339926,0.00007541081,0.00016776704,0.00031605214],"category_scores_gemma":[0.000051300904,0.00025215046,0.00007492595,0.00061046385,0.000013120443,0.00023142318,0.000046762605,0.0002782571,0.00008570243],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020849674,0.0042946874,0.33040503,0.000098700075,0.00030331945,0.0006821654,0.00030636304,0.00019918778,0.64408,0.000010802336,0.0008189716,0.016715838],"study_design_scores_gemma":[0.015930843,0.0013006915,0.8257378,0.0018453231,0.00015388819,0.00020030265,0.00008528092,0.00056020595,0.149256,0.000026119398,0.004259332,0.0006442544],"about_ca_topic_score_codex":0.0001471337,"about_ca_topic_score_gemma":0.00018221581,"teacher_disagreement_score":0.49533272,"about_ca_system_score_codex":0.00059507013,"about_ca_system_score_gemma":0.00012633104,"threshold_uncertainty_score":0.9999931},"labels":[],"label_agreement":null},{"id":"W1535889330","doi":"","title":"Failure of a VapA/CpG oligodeoxynucleotide vaccine to protect foals against experimental Rhocococcus equi pneumonia despite induction of VapA-specific antibody and interferon-γ response.","year":2013,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Rhodococcus equi; Bronchoalveolar lavage; Antibody; CpG Oligodeoxynucleotide; Virology; Medicine; Immunology; Pneumonia; Vaccination; Microbiology; Biology; Lung; Virulence; Gene expression; Gene; DNA methylation; Internal medicine","score_opus":0.015637682166721956,"score_gpt":0.2567034525694574,"score_spread":0.24106577040273547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1535889330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99354804,0.00042840975,0.000053752825,0.00040330345,0.00015485733,0.0048941043,0.00002168574,0.00006813769,0.00042770503],"genre_scores_gemma":[0.9962877,0.000034987348,0.00015804096,0.00007981449,0.000086438085,0.0031046548,0.000023847926,0.000049085455,0.00017540064],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99811625,0.00010763801,0.0006106147,0.0004459361,0.00029368754,0.00042585074],"domain_scores_gemma":[0.9985863,0.000048930506,0.00029513362,0.00045870908,0.0002381621,0.00037277667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033404597,0.00028701048,0.0005765478,0.00037809976,0.00007263417,0.000035190813,0.00006587692,0.00011539696,0.00008384312],"category_scores_gemma":[0.000121217345,0.00023534596,0.00014335738,0.00029532646,0.0000714908,0.00020454018,0.000102236445,0.00012474754,0.000011401277],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003221557,0.0013939057,0.05704505,0.00024865955,0.00053055194,0.00018964217,0.00077680685,0.000008079772,0.8989539,0.000037305203,0.0006294187,0.036965128],"study_design_scores_gemma":[0.0027140367,0.0010345002,0.72860944,0.00018916717,0.000117075,0.00021036435,0.0003076048,0.000011705707,0.26573557,0.000032553722,0.00082053087,0.00021745243],"about_ca_topic_score_codex":0.00013019245,"about_ca_topic_score_gemma":0.0000067165574,"teacher_disagreement_score":0.6715644,"about_ca_system_score_codex":0.00020538615,"about_ca_system_score_gemma":0.000057643116,"threshold_uncertainty_score":0.959713},"labels":[],"label_agreement":null},{"id":"W1553229550","doi":"10.1111/cmi.12050","title":"Diversion of phagosome trafficking by pathogenic <i> <scp>R</scp> hodococcus equi </i> depends on mycolic acid chain length","year":2012,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Center for Research Resources; National Institute of General Medical Sciences; U.S. Public Health Service; Wellcome Trust","keywords":"Phagolysosome; Mycolic acid; Biology; Microbiology; Mutant; Phagosome; Bacteria; Mycobacterium; Biochemistry; Phagocytosis; Gene; Genetics","score_opus":0.011212145836412262,"score_gpt":0.23027815435265717,"score_spread":0.21906600851624491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1553229550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890255,0.0075010844,0.00009216445,0.000017306169,0.0004995544,0.00047105836,0.00015752576,0.000073716255,0.0021621054],"genre_scores_gemma":[0.99770707,0.00016763594,0.000037234233,0.00028587857,0.00017278326,0.000020380296,0.00089534797,0.00004204597,0.00067160255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842054,0.00012387618,0.00035541801,0.00036200442,0.00009285175,0.00064529426],"domain_scores_gemma":[0.9989618,0.000099527555,0.00024619323,0.00037356152,0.00007065787,0.00024828035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024666148,0.00029189498,0.00051033945,0.00015789512,0.00012317434,0.000006168801,0.00007878486,0.0002680902,0.00012206966],"category_scores_gemma":[0.0000756116,0.00024140417,0.00027717388,0.0001500577,0.00011885726,0.000060826358,0.00007477411,0.00019641336,0.0001513207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004405983,0.0011332727,0.014935334,0.00007868179,0.00025998987,0.00026467844,0.00030884155,0.0000016592461,0.9795098,0.00004964639,0.001896724,0.0015173601],"study_design_scores_gemma":[0.0027786698,0.00083724054,0.0011934203,0.00007458269,0.00050659745,0.00086340035,0.00015488076,0.0000057699076,0.9593234,0.0000061671544,0.034126125,0.00012976819],"about_ca_topic_score_codex":0.000015014074,"about_ca_topic_score_gemma":9.68092e-7,"teacher_disagreement_score":0.0322294,"about_ca_system_score_codex":0.00014804643,"about_ca_system_score_gemma":0.00006964651,"threshold_uncertainty_score":0.9844176},"labels":[],"label_agreement":null},{"id":"W160053936","doi":"","title":"Rhodococcus equi pleuropneumonia in an adult horse.","year":2002,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhodococcus equi; Pleuropneumonia; Warmblood; Horse; Medicine; Pneumonia; Virology; Biology; Internal medicine; Virulence","score_opus":0.04272990947310497,"score_gpt":0.2514653643257572,"score_spread":0.20873545485265227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W160053936","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9672807,0.00018058046,0.0000016998703,0.00026927402,0.00015067292,0.0007772116,0.0000061535584,0.00009938168,0.03123434],"genre_scores_gemma":[0.9968198,0.00005736227,0.000013603118,0.0005059485,0.000118507836,0.0008610908,0.000017375387,0.000024985831,0.0015813123],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989486,0.000031451393,0.00020781672,0.00025838971,0.00017378812,0.0003799972],"domain_scores_gemma":[0.9992702,0.000011951647,0.000051592153,0.00029270528,0.00006717642,0.0003063684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007541025,0.00012879365,0.00019366138,0.00012330232,0.00003892502,0.000022827182,0.000030443483,0.00005288535,0.00018204845],"category_scores_gemma":[0.00008812859,0.00010567694,0.0000685581,0.00016847216,0.000028447766,0.00010309696,0.000016025731,0.00010076822,0.00007686076],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005637139,0.0014308061,0.8404865,0.000037602782,0.000062854706,0.005969453,0.0001292161,0.0000029403845,0.00003668386,0.0001252619,0.0005962231,0.15106608],"study_design_scores_gemma":[0.0016636221,0.00009383428,0.9953771,0.000012284373,0.00007801794,0.0003301235,0.00001486458,0.0001460628,0.00013424567,0.000048875725,0.0019860459,0.000114927985],"about_ca_topic_score_codex":0.00008810901,"about_ca_topic_score_gemma":0.000046998528,"teacher_disagreement_score":0.1548906,"about_ca_system_score_codex":0.000120801495,"about_ca_system_score_gemma":0.0000122489355,"threshold_uncertainty_score":0.43093807},"labels":[],"label_agreement":null},{"id":"W1621138217","doi":"10.4103/1319-2442.135175","title":"Emphysematous polycystic infection in a patient on peritoneal dialysis","year":2014,"lang":"en","type":"article","venue":"Saudi Journal of Kidney Diseases and Transplantation","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Medicine; Peritoneal dialysis; Polycystic kidney disease; Polycystic disease; Polycystic kidney; Dialysis; End stage renal disease; Kidney disease; Disease; Urology; Kidney; Surgery; Internal medicine","score_opus":0.004953009879491463,"score_gpt":0.24038832702923355,"score_spread":0.23543531714974208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1621138217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998562,0.00022509735,0.00027920344,0.00020693772,0.00017544757,0.00014145506,0.000033442444,0.000010242799,0.0003662164],"genre_scores_gemma":[0.9981726,0.0011626941,0.000026365278,0.00045499293,0.000108818014,0.000006757646,0.00005173326,0.000010758286,0.0000053148065],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99915934,0.00005381744,0.00033181463,0.00011475668,0.00022687913,0.00011337621],"domain_scores_gemma":[0.9991829,0.0000416396,0.00018633525,0.000065293985,0.00007680422,0.00044703667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000061789484,0.00011479364,0.00025066733,0.00023982688,0.000059011785,0.000020004998,0.0000099605395,0.000035983507,0.000022045373],"category_scores_gemma":[0.00011395551,0.0000866502,0.00014169065,0.000109306755,0.000025347146,0.00009717027,0.0000018519145,0.000081263024,0.0000020889408],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042210724,0.0018668221,0.95880127,0.0009197706,0.00036727882,0.0031094602,0.0005869545,0.0001968305,0.000401523,0.00011895942,0.00015365868,0.029256403],"study_design_scores_gemma":[0.0035443525,0.0014557058,0.9897865,0.0007428021,0.0013166894,0.0020262378,0.00002213261,0.00018480976,0.00030419225,0.0002846111,0.00022774708,0.00010420857],"about_ca_topic_score_codex":0.000076773744,"about_ca_topic_score_gemma":0.0000068540935,"teacher_disagreement_score":0.030985245,"about_ca_system_score_codex":0.000055706598,"about_ca_system_score_gemma":0.00013426396,"threshold_uncertainty_score":0.35334927},"labels":[],"label_agreement":null},{"id":"W1665190663","doi":"10.5489/cuaj.3008","title":"Fungus ball and emphysematous cystitis secondary to Candida tropicalis: A case report","year":2015,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Fluconazole; Urinary system; Candida tropicalis; Antifungal; Medicine; Fungus; Diabetes mellitus; Urinary bladder; Saline; Surgery; Internal medicine; Biology; Endocrinology; Dermatology","score_opus":0.012421752448772286,"score_gpt":0.24359618547193754,"score_spread":0.23117443302316526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1665190663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98184204,0.00053040136,0.000016067535,0.006480983,0.00045986337,0.00023413946,0.000058574387,0.000031006017,0.010346899],"genre_scores_gemma":[0.99428177,0.000020879997,0.00006658506,0.0042695063,0.0005083729,0.000013614206,0.000027700213,0.00001233769,0.00079926243],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9986875,0.000078899764,0.00034812692,0.0002161058,0.00027835727,0.0003909913],"domain_scores_gemma":[0.99643445,0.000038512044,0.00019016575,0.00011592199,0.0003925917,0.0028283456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036186812,0.00013630974,0.00028656507,0.00015142321,0.00022836795,0.00010534548,0.000023718974,0.00016218035,0.00021547664],"category_scores_gemma":[0.0010693321,0.00010727352,0.000089993955,0.00012768374,0.000019907548,0.000069243746,0.000010952698,0.00030841146,0.000034450404],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003228512,0.000044144643,0.4800469,0.0000038167295,0.00014568021,0.4933974,0.00010993641,0.0000036518509,0.0000017142366,0.00003455542,0.02494615,0.0012337494],"study_design_scores_gemma":[0.0012287757,0.0005020325,0.2806476,0.0000121291005,0.0001858682,0.63211966,0.000094318275,0.000007384066,0.000002637409,0.00040262297,0.084674865,0.0001221196],"about_ca_topic_score_codex":0.008519858,"about_ca_topic_score_gemma":0.0053108125,"teacher_disagreement_score":0.1993993,"about_ca_system_score_codex":0.0014796287,"about_ca_system_score_gemma":0.0013805113,"threshold_uncertainty_score":0.9980825},"labels":[],"label_agreement":null},{"id":"W1752409207","doi":"10.5489/cuaj.2828","title":"Emphysematous pyelonephritis: Our experience in managing these cases","year":2015,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Nausea; Vomiting; Nephrectomy; Surgery; Erythrocyte sedimentation rate; Diabetes mellitus; Nephrostomy; Radiological weapon; Mortality rate; Internal medicine; Kidney; Percutaneous","score_opus":0.037521930342792206,"score_gpt":0.2918440692680656,"score_spread":0.2543221389252734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1752409207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899323,0.0004120888,0.0000064360106,0.005578387,0.00026254455,0.0001378917,0.0000076235847,0.00002477602,0.003637932],"genre_scores_gemma":[0.9972361,0.000047427253,0.000038576618,0.002143739,0.00022766062,0.00001513684,0.000008455181,0.000009437699,0.0002734657],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99879307,0.00008748006,0.00026538884,0.00015081807,0.0002979998,0.00040524552],"domain_scores_gemma":[0.9985385,0.000031037864,0.00014729991,0.00008500373,0.0001970587,0.0010011074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000342697,0.00010896393,0.0002158188,0.00019421375,0.00010134962,0.00007529383,0.000041002433,0.00011569293,0.00007498728],"category_scores_gemma":[0.0008747063,0.00008701178,0.00008392007,0.00018192902,0.000011320051,0.0001144809,0.000009160038,0.0002755886,0.000045377306],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029394272,0.0000829978,0.97312254,0.000002244576,0.000044646393,0.02217915,0.00050076697,0.000025719402,0.0000031161067,0.00006472286,0.001916468,0.0020282662],"study_design_scores_gemma":[0.0020002085,0.00034791848,0.96119434,0.000044606506,0.00007030428,0.015758147,0.0014835077,0.00009973116,0.000009641705,0.0013920271,0.017422376,0.00017720739],"about_ca_topic_score_codex":0.004499553,"about_ca_topic_score_gemma":0.0018314244,"teacher_disagreement_score":0.015505908,"about_ca_system_score_codex":0.0017260025,"about_ca_system_score_gemma":0.00062706956,"threshold_uncertainty_score":0.68020076},"labels":[],"label_agreement":null},{"id":"W1775283976","doi":"10.5489/cuaj.887","title":"Xanthogranulomatous cystitis associated with inflammatory bowel disease","year":2013,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Inflammatory bowel disease; Medicine; Disease; Inflammatory Bowel Diseases; Dermatology; Gastroenterology; Pathology","score_opus":0.004948195532099656,"score_gpt":0.1935567525921573,"score_spread":0.18860855706005764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1775283976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98973006,0.00018262945,0.00001640194,0.004953962,0.00017831828,0.00039768353,0.00004258957,0.000076710465,0.0044216705],"genre_scores_gemma":[0.99600273,0.000033652097,0.000025239257,0.0026378802,0.00021059808,0.00004617916,0.00008126446,0.0000216508,0.0009407892],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99836373,0.00010917316,0.0003163538,0.00019891273,0.00044025917,0.0005715502],"domain_scores_gemma":[0.9967956,0.00007556058,0.00030608155,0.00012686745,0.0005696756,0.00212622],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00023123735,0.00018298143,0.0002427911,0.00017806048,0.00040333797,0.00016102292,0.000048688773,0.00017262285,0.0019175657],"category_scores_gemma":[0.00077618,0.00012872493,0.00016205793,0.00015363847,0.000047022397,0.00016750419,0.000007344187,0.0003765936,0.00020575192],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002856397,0.00012134212,0.9875925,0.0000045768093,0.00032797363,0.0042717275,0.000019050573,0.000019414854,0.0000055036467,0.000058732472,0.0069564,0.000594212],"study_design_scores_gemma":[0.0013313837,0.000234153,0.99150324,0.000041394727,0.00027160314,0.00077617523,0.000015138209,0.00012701256,0.0000016245784,0.00044995316,0.005095483,0.00015284138],"about_ca_topic_score_codex":0.0008152222,"about_ca_topic_score_gemma":0.0004995505,"teacher_disagreement_score":0.0062727123,"about_ca_system_score_codex":0.0014607504,"about_ca_system_score_gemma":0.0010665571,"threshold_uncertainty_score":0.9989948},"labels":[],"label_agreement":null},{"id":"W1936699549","doi":"10.1111/hdi.12274","title":"Successful medical treatment of emphysematous pyelonephritis in chronic hemodialysis","year":2015,"lang":"en","type":"article","venue":"Hemodialysis International","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Hemodialysis; Percutaneous; Dialysis; Urinary system; Nephrectomy; Antibiotics; Diabetes mellitus; Kidney disease; Abdominal pain; Surgery; Intensive care medicine; Urinary tract obstruction; Kidney; Internal medicine","score_opus":0.022351827116121433,"score_gpt":0.31378837683497635,"score_spread":0.2914365497188549,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1936699549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870542,0.0006706319,0.0001375734,0.00048537456,0.00031697293,0.00025084804,0.000033281653,0.000042354433,0.01100872],"genre_scores_gemma":[0.99810064,0.00040640216,0.00016020818,0.00008202463,0.00040685607,0.000093716546,0.00032513807,0.000021789076,0.00040323593],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977548,0.00005214886,0.00059562165,0.00034188823,0.0010315096,0.0002239969],"domain_scores_gemma":[0.99879116,0.000057284684,0.00018301645,0.00030913868,0.00031528823,0.00034414182],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00019215762,0.00020258926,0.0005935173,0.00044951987,0.000024704936,0.00001780123,0.000092257884,0.00013092073,0.0012566973],"category_scores_gemma":[0.0001830134,0.00016852585,0.0003550188,0.0003225549,0.00009162491,0.000100627076,0.00003725683,0.000069841066,0.00006119252],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043272157,0.0040058005,0.9199189,0.0000552234,0.0021880118,0.007589431,0.0007071768,0.0003660295,0.00026868476,0.0003686622,0.00048516828,0.06361422],"study_design_scores_gemma":[0.1404319,0.0075280243,0.6227672,0.0018134366,0.0074050515,0.015593986,0.0010802844,0.08105931,0.052394193,0.004440366,0.06270871,0.0027775515],"about_ca_topic_score_codex":0.001592199,"about_ca_topic_score_gemma":0.000574043,"teacher_disagreement_score":0.29715168,"about_ca_system_score_codex":0.0016969036,"about_ca_system_score_gemma":0.0010681686,"threshold_uncertainty_score":0.99965626},"labels":[],"label_agreement":null},{"id":"W1964627988","doi":"10.5489/cuaj.10133","title":"Emphysematous pyelonephritis with complete duplication of the left urinary tract","year":2011,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Nephrectomy; Urinary system; Computed tomography; Surgery; Ureter; Abdominal pain; Pelvis; Renal colic; Lower abdominal pain; Renal pelvis; Parenchyma; Radiology; Kidney; Internal medicine; Pathology","score_opus":0.017845011761339243,"score_gpt":0.21290809046082776,"score_spread":0.19506307869948852,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1964627988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9902459,0.000091639304,0.000022252756,0.0017203364,0.00008744913,0.00020244275,0.000027570535,0.000012796407,0.007589654],"genre_scores_gemma":[0.99874526,0.00002157875,0.00008213331,0.00087576313,0.00007304603,0.0000047956987,0.000009275035,0.000008499853,0.00017963618],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99914414,0.000065740576,0.00023045165,0.00010519061,0.00023612236,0.00021833066],"domain_scores_gemma":[0.9989337,0.000026989304,0.00033092653,0.00012577132,0.0002564292,0.00032621645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016058743,0.00008820512,0.00017834421,0.00006542006,0.00021299007,0.000014172215,0.00005106214,0.00009492581,0.0005108809],"category_scores_gemma":[0.00009706071,0.00005111092,0.00012109874,0.00010034697,0.000041787993,0.00005280707,0.0000060802563,0.00022680007,0.000012036537],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003496841,0.00026716455,0.9978626,0.0000045708616,0.00012640358,0.00050792826,0.00013136893,0.000002228253,0.000024798674,0.00015558173,0.0003733541,0.0005090701],"study_design_scores_gemma":[0.00059916516,0.00052331237,0.9861283,0.000019282159,0.00015717288,0.008558154,0.000017859436,0.00001248724,0.000032049928,0.0004037844,0.0034924352,0.000056026976],"about_ca_topic_score_codex":0.0012348696,"about_ca_topic_score_gemma":0.0002575143,"teacher_disagreement_score":0.011734293,"about_ca_system_score_codex":0.0004116888,"about_ca_system_score_gemma":0.0004142382,"threshold_uncertainty_score":0.55937874},"labels":[],"label_agreement":null},{"id":"W1965219846","doi":"10.1259/bjr/53711174","title":"Spontaneous ureterocolic fistula secondary to calculous pyohydroureteronephrosis","year":2005,"lang":"en","type":"article","venue":"British Journal of Radiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"Medicine; Fistula; Surgery; Stent; Radiology","score_opus":0.007172509820318864,"score_gpt":0.24891969888919424,"score_spread":0.24174718906887538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1965219846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935266,0.0033087127,0.00015141234,0.00060544064,0.00031064305,0.0002695658,0.000023885106,0.000024227782,0.0017795423],"genre_scores_gemma":[0.9947792,0.0003228784,0.001021925,0.002471989,0.0009046772,0.000009899365,0.000012467275,0.000028165729,0.0004487485],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99870485,0.00007085959,0.0005373166,0.00018285723,0.00018838231,0.00031571926],"domain_scores_gemma":[0.99896187,0.00003765326,0.00022465274,0.00014466267,0.00018501317,0.00044616082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018267999,0.00014682623,0.0005387714,0.00016428973,0.00009097163,0.000029468009,0.00006840924,0.0001231722,0.0005356389],"category_scores_gemma":[0.00010359181,0.00014701093,0.000264212,0.00009170499,0.00006226572,0.00007174568,0.00002232757,0.00029688005,0.00004047496],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011143807,0.0009991756,0.013297292,0.00008016958,0.0013464092,0.68474054,0.00034559454,0.00019585983,0.004285259,0.000018622888,0.07076657,0.22281013],"study_design_scores_gemma":[0.002028952,0.001284314,0.05273721,0.00013135672,0.0002436594,0.9014593,0.000011700208,0.000012672414,0.00024276745,0.000021284957,0.041708462,0.00011832221],"about_ca_topic_score_codex":0.00007371469,"about_ca_topic_score_gemma":0.000087963155,"teacher_disagreement_score":0.22269182,"about_ca_system_score_codex":0.00028022577,"about_ca_system_score_gemma":0.00020257375,"threshold_uncertainty_score":0.59949315},"labels":[],"label_agreement":null},{"id":"W1975277855","doi":"10.1016/j.vetimm.2013.09.021","title":"Analyses of lipid rafts, Toll-like receptors 2 and 4, and cytokines in foals vaccinated with Virulence Associated Protein A/CpG oligonucleotide vaccine against Rhodococcus equi","year":2013,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; Biology; TLR2; Lipid raft; Immune system; Microbiology; Receptor; Immunology; TLR4; Toll-like receptor; Virulence; Virology; Innate immune system; Gene","score_opus":0.01888184983535078,"score_gpt":0.28112051991422693,"score_spread":0.26223867007887613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1975277855","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922055,0.0062565943,0.000007151929,0.00017425114,0.00013181585,0.00094007974,0.000011200824,0.00005941447,0.00021400512],"genre_scores_gemma":[0.9967055,0.002509793,0.00017566403,0.000116031915,0.000012938707,0.00024003355,0.000056972916,0.000032173884,0.00015089466],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9981254,0.0003023881,0.00057343877,0.0004963848,0.00008030771,0.00042213],"domain_scores_gemma":[0.9989949,0.00009167925,0.00032691896,0.00032898624,0.00017235044,0.00008520132],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002276566,0.00035168423,0.00089106744,0.0003888643,0.00013655484,0.000019359355,0.000058645932,0.00027024615,0.000094396084],"category_scores_gemma":[0.0001382902,0.00026942592,0.000050679944,0.00026742,0.00031826328,0.00022506455,0.00016942256,0.00026927842,0.000004363338],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001963004,0.00062982633,0.2189535,0.00016037314,0.00065877684,0.0026241574,0.0002700926,0.0000013399718,0.766291,0.000024922136,0.000016114802,0.008406843],"study_design_scores_gemma":[0.0063674594,0.0082001975,0.96417105,0.00042232274,0.00023549228,0.008045474,0.00027089054,0.000036443646,0.01166187,0.00009096517,0.00018743011,0.00031039078],"about_ca_topic_score_codex":0.00042024822,"about_ca_topic_score_gemma":0.000012219988,"teacher_disagreement_score":0.7546292,"about_ca_system_score_codex":0.000055655357,"about_ca_system_score_gemma":0.000064449785,"threshold_uncertainty_score":0.9999758},"labels":[],"label_agreement":null},{"id":"W1976948840","doi":"10.1046/j.1439-0450.2003.00692.x","title":"Emphysematous Cystitis due to <i>Escherichia coli</i> Associated with Prolonged Chemotherapy in a Non‐Diabetic Dog","year":2003,"lang":"en","type":"article","venue":"Journal of Veterinary Medicine Series B","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Canine Lymphoma; Medicine; Chemotherapy; Lymphoma; Urinary system; Pathogenesis; Escherichia coli; Labrador Retriever; Glucocorticoid; Internal medicine; Urology; Gastroenterology; Immunology; Pathology; Biology","score_opus":0.01318890693617974,"score_gpt":0.27453723860739254,"score_spread":0.2613483316712128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1976948840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99442077,0.00034116858,0.000048784634,0.001176966,0.00028338865,0.00059925916,0.0000033196518,0.000019834226,0.003106488],"genre_scores_gemma":[0.997659,0.00009839073,0.00042467634,0.0012353653,0.00014088379,0.000032903128,0.000006425985,0.00004605489,0.00035625914],"study_design_codex":"case_report","study_design_gemma":"observational","domain_scores_codex":[0.9982659,0.00010912644,0.0006403831,0.00019698407,0.00045382392,0.0003337781],"domain_scores_gemma":[0.99862987,0.000054229884,0.00040962626,0.00021809593,0.00032191686,0.00036629205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043407825,0.0002682973,0.00089450367,0.00025923995,0.000064450156,0.0000127670555,0.00005633147,0.000083603954,0.00019261512],"category_scores_gemma":[0.000302054,0.00017773574,0.0000993336,0.0005079422,0.00011578361,0.00014956814,0.000010577746,0.00026633946,0.0000042929164],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.01829978,0.008045786,0.35053805,0.001250647,0.004032647,0.49065176,0.009231059,0.00011317259,0.10735657,0.00009535939,0.0063359137,0.0040492574],"study_design_scores_gemma":[0.02473769,0.07582116,0.78769964,0.0052959137,0.0008081178,0.08971232,0.0009290364,0.000011671838,0.0035003652,0.00012119337,0.010830466,0.0005324386],"about_ca_topic_score_codex":0.000026350828,"about_ca_topic_score_gemma":0.00001339871,"teacher_disagreement_score":0.4371616,"about_ca_system_score_codex":0.0002476156,"about_ca_system_score_gemma":0.00030963618,"threshold_uncertainty_score":0.7247853},"labels":[],"label_agreement":null},{"id":"W1981549019","doi":"10.1016/j.vetimm.2011.10.011","title":"Development of a live, attenuated, potential vaccine strain of R. equi expressing vapA and the virR operon, and virulence assessment in the mouse","year":2011,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virulence; Rhodococcus equi; Biology; Plasmid; Microbiology; Virology; Attenuated vaccine; Strain (injury); Gene; Recombinant DNA; Inoculation; Genetics; Immunology","score_opus":0.029346866695619027,"score_gpt":0.28238934071156996,"score_spread":0.2530424740159509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981549019","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99438125,0.004793806,0.00006996057,0.00007424382,0.00006246683,0.00039243235,0.000007820666,0.000008199108,0.00020981372],"genre_scores_gemma":[0.99759537,0.0011289713,0.0011136547,0.000063621235,0.000005802989,0.00005937996,0.000011213151,0.000009808541,0.000012195804],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987644,0.00029740544,0.00044871296,0.00022542944,0.000068942725,0.0001951265],"domain_scores_gemma":[0.99939436,0.00005955881,0.00020361085,0.00026876575,0.000052195155,0.000021529522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005360491,0.0001628448,0.00040493516,0.00009826784,0.00014844585,0.000006491871,0.00007317386,0.00010710926,0.000027748058],"category_scores_gemma":[0.00002576004,0.00009477135,0.000034390232,0.000058226353,0.00053466746,0.00007388494,0.00018271658,0.00020679536,5.5918815e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004342447,0.00090675923,0.031827327,0.00016188005,0.00042905236,0.0018428086,0.01603801,3.398122e-7,0.92492896,0.0006340808,0.0000015396826,0.018886808],"study_design_scores_gemma":[0.006557662,0.0025442478,0.9677882,0.00012255521,0.00020894113,0.014615071,0.0036845177,0.000026113965,0.0041031935,0.0001806933,0.00004333352,0.00012545298],"about_ca_topic_score_codex":0.000098935976,"about_ca_topic_score_gemma":0.0000036541417,"teacher_disagreement_score":0.9359609,"about_ca_system_score_codex":0.000016138583,"about_ca_system_score_gemma":0.00007567763,"threshold_uncertainty_score":0.38646632},"labels":[],"label_agreement":null},{"id":"W1990662635","doi":"10.1016/j.vetmic.2006.08.006","title":"Cholesterol oxidase (ChoE) is not important in the virulence of Rhodococcus equi","year":2006,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Deutsche Forschungsgemeinschaft","keywords":"Virulence; Rhodococcus equi; Biology; Microbiology; Mutant; Strain (injury); Virology; Gene; Biochemistry; Anatomy","score_opus":0.0231805488942475,"score_gpt":0.2913023080998516,"score_spread":0.2681217592056041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990662635","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9978901,0.00028794762,0.0000053992994,0.00028740254,0.00012738747,0.00040232396,0.00010066515,0.000018946279,0.0008798093],"genre_scores_gemma":[0.99847806,0.000050962637,0.000043642478,0.0011042705,0.00006549938,0.000037076465,0.00009516359,0.000012698772,0.00011265217],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99890286,0.00007999359,0.00044857964,0.0002619692,0.000048843423,0.00025775767],"domain_scores_gemma":[0.9993484,0.000040672046,0.00017054957,0.0003652199,0.000041302985,0.000033857297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016979271,0.00016024892,0.00029130376,0.00009924834,0.000039255174,0.000006316907,0.00007404954,0.00009676229,0.000113222144],"category_scores_gemma":[0.000011421598,0.000103117636,0.000118521355,0.00011661484,0.00013905659,0.000034740227,0.000043533873,0.00011090882,0.000024349185],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025883893,0.00074494584,0.05504228,0.00007951337,0.000048064987,0.0027819835,0.00012683755,9.3933124e-7,0.93998885,0.000036320675,0.00049967656,0.0003917212],"study_design_scores_gemma":[0.008423369,0.008143133,0.61187726,0.00037718593,0.00040456536,0.059994288,0.00015488804,0.000020298805,0.25967756,0.00024253393,0.050079707,0.00060524617],"about_ca_topic_score_codex":0.0005373661,"about_ca_topic_score_gemma":0.000016534608,"teacher_disagreement_score":0.6803113,"about_ca_system_score_codex":0.000049800365,"about_ca_system_score_gemma":0.000056571935,"threshold_uncertainty_score":0.4205015},"labels":[],"label_agreement":null},{"id":"W1991049981","doi":"10.1111/j.1939-1676.2011.00804.x","title":"<i>R</i> <i>hodococcus equi</i> : Clinical Manifestations, Virulence, and Immunity","year":2011,"lang":"en","type":"review","venue":"Journal of Veterinary Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":139,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Virulence; Medicine; Pneumonia; Immunity; Pathogen; Intracellular parasite; Immunology; Disease; Facultative; Microbiology; Virology; Intensive care medicine; Immune system; Biology; Pathology; Internal medicine; Gene","score_opus":0.205670642098405,"score_gpt":0.4736716363343847,"score_spread":0.2680009942359797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991049981","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0061007617,0.9859484,0.00004634897,0.000047312667,0.0019995933,0.0004807113,0.000031795134,0.000020471416,0.0053246063],"genre_scores_gemma":[0.002645292,0.994777,0.00022689281,0.00026390018,0.0015084397,0.000013422467,0.000033246622,0.000064080676,0.00046771395],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99586475,0.00039384642,0.002747993,0.00030220047,0.00041209912,0.00027912098],"domain_scores_gemma":[0.9955745,0.00041800135,0.0025436874,0.00042747596,0.00040630193,0.0006300494],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012465527,0.00052443607,0.0030307204,0.0005034433,0.00008122576,0.00001847065,0.00019734375,0.00027834732,0.00032457145],"category_scores_gemma":[0.00045045826,0.00031327756,0.00087978627,0.00015758001,0.00039279915,0.00015679459,0.00014333373,0.0012843288,0.000017591414],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006150761,0.0008053863,0.0010862078,0.009011393,0.0023520773,0.06005117,0.000094514384,8.58008e-9,0.0000034490433,0.000035780693,0.0030472574,0.9228977],"study_design_scores_gemma":[0.001614225,0.011010815,0.0008607389,0.045471724,0.005820244,0.23065197,0.000028377832,4.0608867e-7,2.518873e-7,0.00005192278,0.70431775,0.00017158469],"about_ca_topic_score_codex":0.00006647758,"about_ca_topic_score_gemma":6.6605185e-7,"teacher_disagreement_score":0.9227261,"about_ca_system_score_codex":0.0001684711,"about_ca_system_score_gemma":0.0004705664,"threshold_uncertainty_score":0.99993193},"labels":[],"label_agreement":null},{"id":"W1995668689","doi":"10.1038/ki.2008.548","title":"The Case ∣ A kidney transplant presenting with acute renal failure and mass","year":2009,"lang":"en","type":"article","venue":"Kidney International","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Hospital Edmonton; University of Alberta Hospital","funders":"","keywords":"Medicine; Pathology; Kidney; Biopsy; Focal segmental glomerulosclerosis; Transplantation; Renal biopsy; Acute tubular necrosis; Population; Internal medicine; Glomerulonephritis","score_opus":0.006437007738691266,"score_gpt":0.25304382302584033,"score_spread":0.24660681528714906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995668689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93515074,0.000071941686,0.0005948867,0.034901746,0.00023441906,0.000466689,0.0002781793,0.00009395867,0.028207432],"genre_scores_gemma":[0.9957804,0.000047520392,0.0005203872,0.0014656706,0.00017772151,0.000017303082,0.00016931337,0.0000095453,0.0018121289],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9992865,0.000012363456,0.00014648717,0.00018292462,0.00021534848,0.00015641123],"domain_scores_gemma":[0.9993157,0.000020276104,0.00006470348,0.00012534088,0.00010246834,0.00037152471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006386203,0.00011606968,0.00009979469,0.00004764063,0.00018990488,0.00007828134,0.000034258657,0.000034381905,0.00009185244],"category_scores_gemma":[0.000055910456,0.000065855194,0.000053787775,0.00004582936,0.000048285154,0.00008179624,0.0000071678455,0.000105195635,0.0000049873006],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002139145,0.0011290829,0.2261035,0.00008899943,0.0087868795,0.6470043,0.0011669818,0.000009451861,0.0076389657,0.009714927,0.08773586,0.0084818825],"study_design_scores_gemma":[0.014125376,0.0011453312,0.04445931,0.00068783126,0.0029304477,0.63052607,0.00019009829,0.0052012764,0.0046829907,0.0023694357,0.29303664,0.00064518885],"about_ca_topic_score_codex":0.000027864982,"about_ca_topic_score_gemma":0.000008992367,"teacher_disagreement_score":0.2053008,"about_ca_system_score_codex":0.00004545919,"about_ca_system_score_gemma":0.00018464432,"threshold_uncertainty_score":0.26854968},"labels":[],"label_agreement":null},{"id":"W1996303405","doi":"10.1016/j.vetmic.2005.08.005","title":"In vitro and intra-macrophage gene expression by Rhodococcus equi strain 103","year":2005,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Virulence; Gene; Rhodococcus equi; Plasmid; Genetics; Microbiology","score_opus":0.013273813875256892,"score_gpt":0.27936944919874296,"score_spread":0.26609563532348607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1996303405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969877,0.0016173706,0.000029082114,0.00029084194,0.00011896089,0.00030073812,0.0002212418,0.000035703593,0.00039838318],"genre_scores_gemma":[0.9974271,0.00012264508,0.0008930852,0.0006888806,0.0001202863,0.000030684663,0.0003446183,0.000019693867,0.00035297504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990289,0.000069651294,0.00023976604,0.00033287547,0.00002624264,0.00030255815],"domain_scores_gemma":[0.999597,0.000023771112,0.00006215689,0.00018294249,0.000018093791,0.0001160152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000084269,0.00017566989,0.00027843556,0.00009234987,0.00005009551,0.000008013168,0.000029454006,0.00014021153,0.00028955025],"category_scores_gemma":[0.00001187314,0.00014365595,0.000049993916,0.00005503634,0.000095418814,0.00006476524,0.00006396769,0.00012282458,0.00003355477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047811712,0.00035142773,0.00043051454,0.000032608878,0.000034561745,0.0030249418,0.0000725396,5.739649e-7,0.98851556,0.0000013885059,0.0012205534,0.0058372007],"study_design_scores_gemma":[0.0030234435,0.0012295084,0.00086095685,0.000042567346,0.000043350774,0.0168681,0.00001923862,0.000010675567,0.9222856,0.000015340307,0.055402096,0.00019911684],"about_ca_topic_score_codex":0.000025562716,"about_ca_topic_score_gemma":9.1359624e-7,"teacher_disagreement_score":0.06622997,"about_ca_system_score_codex":0.000101605765,"about_ca_system_score_gemma":0.000035143436,"threshold_uncertainty_score":0.585812},"labels":[],"label_agreement":null},{"id":"W1998672814","doi":"10.1136/bcr.01.2012.5537","title":"Sarcomatoid carcinoma of the bladder after simultaneous kidney-pancreas transplant: a case report and review of the literature","year":2012,"lang":"en","type":"review","venue":"BMJ Case Reports","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Medicine; Carcinosarcoma; Sarcomatoid carcinoma; Urinary bladder; Pancreas; Urinary system; Carcinoma; Transplantation; Kidney; Urology; Nephrology; Kidney transplantation; Pathology; Internal medicine","score_opus":0.016716396215200383,"score_gpt":0.30350979333597916,"score_spread":0.2867933971207788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1998672814","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017591998,0.97454786,5.146377e-7,0.000054293974,0.00060679275,0.005718835,0.00043521656,0.000028235172,0.0010162488],"genre_scores_gemma":[0.2130755,0.7851892,0.000016148622,0.00020048398,0.00021442173,0.0003809779,0.000185844,0.00009611552,0.00064128794],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9949762,0.00037003754,0.0027647605,0.00073406426,0.00071589736,0.00043899918],"domain_scores_gemma":[0.992596,0.000195114,0.0033517668,0.0028465728,0.0004929251,0.0005176705],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008743444,0.00080732093,0.002945119,0.00013411621,0.0001695856,0.000022815742,0.00006127215,0.0004649055,0.00016199001],"category_scores_gemma":[0.0008713601,0.00038693723,0.0019898363,0.00058906194,0.0002713907,0.00007228054,0.00014521969,0.0005755343,0.000001679542],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018915418,0.00026619827,0.0019874293,0.17807908,0.0008540586,0.789714,0.000117917174,2.453607e-8,2.0064425e-7,0.0000020272842,0.00019680611,0.02876336],"study_design_scores_gemma":[0.00017140714,0.00003282336,0.000056628836,0.1406242,0.015484766,0.6436538,0.0000049872124,3.8605486e-7,0.00000525638,0.0000028343215,0.19973701,0.0002258953],"about_ca_topic_score_codex":0.00028931297,"about_ca_topic_score_gemma":0.000023002465,"teacher_disagreement_score":0.1995402,"about_ca_system_score_codex":0.0001525783,"about_ca_system_score_gemma":0.0017976989,"threshold_uncertainty_score":0.99985826},"labels":[],"label_agreement":null},{"id":"W2000179109","doi":"10.1016/j.vetmic.2004.08.005","title":"The effect of mutation on Rhodococcus equi virulence plasmid gene expression and mouse virulence","year":2004,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virulence; Biology; Plasmid; Mutant; Gene; Operon; Rhodococcus equi; Genetics; Regulator gene; Mutation; Microbiology; Regulation of gene expression","score_opus":0.011196817244014778,"score_gpt":0.27595799647282726,"score_spread":0.2647611792288125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2000179109","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9986603,0.00047208456,0.000070466536,0.000045393594,0.00014502056,0.00041653978,0.000034552897,0.00003182564,0.00012380588],"genre_scores_gemma":[0.99946153,0.00019729446,0.00010045442,0.00006859322,0.000026070802,0.0000422835,0.00004839393,0.000012925987,0.000042435557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992378,0.00009205729,0.00019683302,0.00024650703,0.000043209584,0.00018363341],"domain_scores_gemma":[0.999422,0.00013605274,0.00011880354,0.00023274685,0.000030404197,0.000059980328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012489618,0.00015026914,0.00021475932,0.000052624564,0.0001394805,0.0000068430913,0.000038348524,0.00008412138,0.000011800637],"category_scores_gemma":[0.000050775914,0.00008787234,0.000060829196,0.000046712463,0.00018860085,0.00003442806,0.00005048341,0.00008260129,0.000017334487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001316547,0.00009423227,0.0011336673,0.00005946374,0.000049013543,0.0007685757,0.000047172416,0.00002826372,0.99468094,0.000014116382,0.000016311613,0.0017916888],"study_design_scores_gemma":[0.0022126052,0.010032047,0.0013468321,0.00013140627,0.00005929841,0.0051220744,0.000007883656,0.0000035218404,0.9805729,0.000027696648,0.00040022808,0.000083533225],"about_ca_topic_score_codex":0.000026576865,"about_ca_topic_score_gemma":7.626046e-7,"teacher_disagreement_score":0.014108074,"about_ca_system_score_codex":0.00006508533,"about_ca_system_score_gemma":0.000033100787,"threshold_uncertainty_score":0.358333},"labels":[],"label_agreement":null},{"id":"W2001827826","doi":"10.1016/j.vetmic.2007.05.007","title":"Immunization by intrabronchial administration to 1-week-old foals of an unmarked double gene disruption strain of Rhodococcus equi strain 103+","year":2007,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; Biology; Virulence; Strain (injury); Pneumonia; Virology; Microbiology; Mutant; Immune system; Immunology; Gene; Medicine; Internal medicine; Genetics","score_opus":0.02695050694664812,"score_gpt":0.32877259276688536,"score_spread":0.30182208582023723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2001827826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963348,0.0000836212,0.0014661393,0.00004457927,0.00020202821,0.0007546341,0.0007576998,0.00003635673,0.000320128],"genre_scores_gemma":[0.9942544,0.00001585055,0.0010589679,0.00007105496,0.00007734508,0.000015885833,0.004362332,0.000024021443,0.00012015561],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986155,0.000090740374,0.00062935776,0.00030675973,0.000070951595,0.00028665908],"domain_scores_gemma":[0.9990687,0.000033237622,0.00028537854,0.00032034382,0.00014594887,0.0001464207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039504503,0.00019520802,0.00037911668,0.00017288068,0.000053515916,0.0000068698128,0.00006180258,0.00018586474,0.00017603436],"category_scores_gemma":[0.000023876875,0.00018172912,0.00009421631,0.00017338763,0.00010897124,0.000089324174,0.000037632075,0.00008159247,0.0000049116684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033190444,0.0013352766,0.0010491336,0.00009575931,0.00013566988,0.00019343366,0.00018562235,0.000008195347,0.9868714,0.00008134705,0.000039013685,0.006686066],"study_design_scores_gemma":[0.0054462207,0.025484536,0.027456826,0.00010969238,0.00026346877,0.0040443246,0.0002120253,0.000018650795,0.93507016,0.00004918174,0.0015148827,0.00033000583],"about_ca_topic_score_codex":0.00012443957,"about_ca_topic_score_gemma":0.000023213257,"teacher_disagreement_score":0.051801253,"about_ca_system_score_codex":0.00012184456,"about_ca_system_score_gemma":0.00012628021,"threshold_uncertainty_score":0.74106985},"labels":[],"label_agreement":null},{"id":"W2004268143","doi":"10.1111/j.1442-200x.2009.002992.x","title":"Complicated xanthogranulomatous pyelonephritis in a child","year":2010,"lang":"en","type":"article","venue":"Pediatrics International","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Pediatric Oncology Group","funders":"","keywords":"Medicine; Nephrology; Internal medicine; University hospital; Pediatrics; Family medicine","score_opus":0.004866563561369301,"score_gpt":0.2703113127363236,"score_spread":0.2654447491749543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2004268143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9410059,0.00007803059,0.000041891628,0.00068720995,0.0008005469,0.00019420583,0.0000517759,0.00007549779,0.057064928],"genre_scores_gemma":[0.9983872,0.00010641108,0.0003475036,0.00021318045,0.0005069674,0.000034940134,0.00024720578,0.000014726403,0.00014185521],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999188,0.000005627133,0.00021589878,0.00018994529,0.00025921816,0.0001412823],"domain_scores_gemma":[0.99952924,0.000025729627,0.00006466037,0.00014313408,0.000129341,0.00010789662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007367535,0.00009389294,0.00012393533,0.0002685909,0.000042717355,0.000023801049,0.000053838776,0.00006903035,0.00047770262],"category_scores_gemma":[0.0001053726,0.000087416935,0.00007793588,0.00018219653,0.000030158924,0.000050228937,0.000028123106,0.0002523802,0.00007088568],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044813845,0.00097320625,0.9902526,0.00001690926,0.00004059307,0.0019234874,0.000031970707,0.0000013612865,0.00015276326,0.0021681883,0.00064338814,0.003750725],"study_design_scores_gemma":[0.002722669,0.000042096337,0.97880393,0.00001545503,0.00006162701,0.004405427,0.00000698976,0.0002915281,0.00009523118,0.0005013404,0.012928228,0.00012545669],"about_ca_topic_score_codex":0.00013534806,"about_ca_topic_score_gemma":0.00008268697,"teacher_disagreement_score":0.057381295,"about_ca_system_score_codex":0.000049272712,"about_ca_system_score_gemma":0.000059203932,"threshold_uncertainty_score":0.52305084},"labels":[],"label_agreement":null},{"id":"W2005061553","doi":"10.1016/s0378-1135(03)00100-7","title":"Partial genome sequencing of Rhodococcus equi ATCC 33701","year":2003,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; Biology; Virulence; Genome; Whole genome sequencing; Gene; Genetics; Mycobacterium tuberculosis; Mycobacterium; Sequence analysis; Homology (biology); Organism; Microbiology; Tuberculosis; Bacteria","score_opus":0.04431369537141379,"score_gpt":0.29562049860741274,"score_spread":0.25130680323599897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005061553","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9941023,0.00055965007,0.0000686198,0.000018875107,0.0002691502,0.0002761265,0.00004002982,0.000042366875,0.0046228757],"genre_scores_gemma":[0.999043,0.000038052895,0.00036252922,0.00014401003,0.000050722818,0.000019272888,0.00009726397,0.00001943214,0.0002257069],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999007,0.00009175142,0.0003058787,0.00026337674,0.00003224477,0.000299742],"domain_scores_gemma":[0.9994103,0.000024791123,0.00012224207,0.00027902026,0.000066178574,0.000097505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011752776,0.00015741542,0.00034629236,0.00008639452,0.000054152457,0.00000337609,0.0000314494,0.00010871023,0.0006222407],"category_scores_gemma":[0.00003601196,0.00013041763,0.00014157877,0.00008730807,0.00011881618,0.000028869827,0.000032275748,0.0000811953,0.000062523235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014464099,0.00018675941,0.0058658156,0.00007964313,0.00018494285,0.0024322204,0.00007699885,0.0000044409994,0.9906439,0.00015407818,0.000040988056,0.00018552701],"study_design_scores_gemma":[0.0080662,0.012094374,0.009843658,0.00021708389,0.0009287644,0.13113187,0.0002336227,0.000013426728,0.6373773,0.0002705616,0.19894591,0.00087722956],"about_ca_topic_score_codex":0.00003514372,"about_ca_topic_score_gemma":7.397032e-7,"teacher_disagreement_score":0.35326666,"about_ca_system_score_codex":0.0001384154,"about_ca_system_score_gemma":0.00018153232,"threshold_uncertainty_score":0.68130994},"labels":[],"label_agreement":null},{"id":"W2005763938","doi":"10.1016/s0378-1135(03)00099-3","title":"Analysis of virulence plasmid gene expression of intra-macrophage and in vitro grown Rhodococcus equi ATCC 33701","year":2003,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Virulence; ORFS; Plasmid; Rhodococcus equi; Gene; Microbiology; Gene expression; Regulon; Gene cluster; Genetics; Open reading frame; Molecular biology; Peptide sequence","score_opus":0.01667443522213764,"score_gpt":0.2751943531535089,"score_spread":0.25851991793137125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005763938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984628,0.0008469546,0.000055445493,0.0000074425657,0.00007241214,0.00020223322,0.00012372168,0.000010429306,0.00021854584],"genre_scores_gemma":[0.99897355,0.00016096659,0.00064941926,0.00004314352,0.000008113007,0.0000140295715,0.00012021632,0.000010423036,0.000020167758],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989503,0.00012425137,0.0003901595,0.00029294775,0.00003702972,0.0002053044],"domain_scores_gemma":[0.9993924,0.000058712212,0.00018094944,0.0002479665,0.000049637314,0.00007033336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013139905,0.0001498443,0.00056654593,0.00034778696,0.000025041923,0.0000020447033,0.00003276627,0.000117283445,0.00015134604],"category_scores_gemma":[0.00004254704,0.00012142274,0.00012329928,0.0003084966,0.0001643009,0.00003341384,0.00004821961,0.00007619667,0.0000018615702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077152543,0.0003892362,0.036107313,0.00009539704,0.0003413254,0.0010380407,0.00008406226,0.000011482152,0.9608375,0.0000037875693,0.000007736719,0.000312613],"study_design_scores_gemma":[0.0012970541,0.0007477225,0.015220079,0.00005352967,0.0005110546,0.0014816779,0.000023217419,0.000017936773,0.98030454,0.000009993141,0.00023169378,0.00010149934],"about_ca_topic_score_codex":0.000056314177,"about_ca_topic_score_gemma":0.0000019484423,"teacher_disagreement_score":0.020887233,"about_ca_system_score_codex":0.000046408964,"about_ca_system_score_gemma":0.00004843444,"threshold_uncertainty_score":0.49514756},"labels":[],"label_agreement":null},{"id":"W2007840984","doi":"10.2746/042516409x383564","title":"Rhodococcus equi comes of age","year":2008,"lang":"en","type":"article","venue":"Equine Veterinary Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Irish; Library science; Citation; History; Philosophy; Computer science; Linguistics","score_opus":0.08257478584575197,"score_gpt":0.33421081342612385,"score_spread":0.2516360275803719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007840984","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98819155,0.0007282401,0.0000815909,0.000104308114,0.00030056408,0.00012334957,0.0000061718424,0.000029787032,0.010434436],"genre_scores_gemma":[0.99764025,0.00033473744,0.00049777847,0.00009751332,0.00025938253,0.0000039641773,0.000011501559,0.000020010673,0.0011348526],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99899435,0.000034878954,0.00036505458,0.0001163797,0.0002665736,0.00022273918],"domain_scores_gemma":[0.99923986,0.00002136658,0.00019047195,0.00019339476,0.000118688025,0.00023620803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011671489,0.00013583625,0.00032676148,0.0001491432,0.00015111154,0.000008825108,0.00004169184,0.000042969445,0.00070179906],"category_scores_gemma":[0.00003572568,0.00010058009,0.00022282265,0.000104771934,0.00010422616,0.00009353724,0.000041699608,0.00016392936,0.000023064069],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017619107,0.0028884774,0.29936665,0.0002620522,0.0012695907,0.5690761,0.0007448636,0.000017299435,0.107974865,0.00010797841,0.006753772,0.009776398],"study_design_scores_gemma":[0.00600333,0.021023754,0.2798568,0.00032554576,0.00033492106,0.664548,0.000064570115,0.000025132706,0.0020778645,0.00020941434,0.025260385,0.00027029187],"about_ca_topic_score_codex":0.000011727597,"about_ca_topic_score_gemma":1.4008499e-7,"teacher_disagreement_score":0.105897,"about_ca_system_score_codex":0.0000743206,"about_ca_system_score_gemma":0.00014703498,"threshold_uncertainty_score":0.76842076},"labels":[],"label_agreement":null},{"id":"W2008910998","doi":"10.1089/109264102321111583","title":"Successful Subcapsular Laparoscopic Nephrectomy in a Child with Xanthogranulomatous Pyelonephritis","year":2002,"lang":"en","type":"article","venue":"Pediatric Endosurgery & Innovative Techniques","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Medicine; Nephrectomy; Xanthogranulomatous pyelonephritis; Surgery; General surgery; Laparoscopy; Resection; Kidney; Internal medicine","score_opus":0.009966545712816653,"score_gpt":0.23830462799432145,"score_spread":0.2283380822815048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2008910998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97647136,0.002001394,0.000099618905,0.0003028065,0.000090148715,0.0012088186,0.00003239294,0.00084072025,0.018952752],"genre_scores_gemma":[0.99527174,0.0019629519,0.0012422873,0.00032018937,0.00030755618,0.0006013038,0.00008164031,0.000081379505,0.00013097597],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9974491,0.00008047201,0.00074420153,0.00061034306,0.00049114623,0.00062471087],"domain_scores_gemma":[0.9984782,0.000108972774,0.00033826948,0.00045846956,0.00045130297,0.0001648166],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002856395,0.0004566994,0.0008226513,0.0012783222,0.00015155361,0.000049306604,0.00007940355,0.00017495363,0.00037057552],"category_scores_gemma":[0.0001261617,0.00037081042,0.0001338882,0.0038861113,0.000114112256,0.00026926416,0.00004636788,0.00045834153,0.000023914454],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000976256,0.0010760635,0.98093355,0.00017085155,0.00011170994,0.010566756,0.000088843335,1.446649e-7,0.00010682613,0.00018331193,0.001425405,0.0052389107],"study_design_scores_gemma":[0.011914933,0.0028904956,0.88281024,0.0012721461,0.0011647951,0.020915277,0.00019374734,0.000037431262,0.05515866,0.0006410087,0.02041952,0.002581729],"about_ca_topic_score_codex":0.00022927475,"about_ca_topic_score_gemma":0.00002077995,"teacher_disagreement_score":0.09812329,"about_ca_system_score_codex":0.00019463939,"about_ca_system_score_gemma":0.00011928424,"threshold_uncertainty_score":0.9998744},"labels":[],"label_agreement":null},{"id":"W2021554514","doi":"10.4021//jmc.v2i1.121","title":"Emphysematous Pyelonephritis in a Patient With Hyperosmolar Hyperglycemic Syndrome","year":2011,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Leukocytosis; Nephrectomy; Urinalysis; Abdominal pain; Urinary system; Diabetes mellitus; Antibiotics; Internal medicine; Gastroenterology; Surgery; Urology; Kidney; Endocrinology","score_opus":0.02133701359232114,"score_gpt":0.25504932936562386,"score_spread":0.2337123157733027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2021554514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973136,0.0014987794,0.000014898494,0.0001593589,0.00014366226,0.00014107926,0.0000034739744,0.000012652564,0.00071246765],"genre_scores_gemma":[0.998992,0.00028349596,0.00021606326,0.00040391326,0.00006073731,0.000006946849,0.0000024290407,0.00001959731,0.000014812173],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9980822,0.00003913249,0.0005221138,0.000121865254,0.0010250487,0.00020962082],"domain_scores_gemma":[0.99890953,0.000058851547,0.0002404577,0.00013789459,0.00014993409,0.00050334254],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019522183,0.00013787119,0.00045308436,0.00019310266,0.000032058702,0.000008172322,0.000051896008,0.00010421923,0.0007231791],"category_scores_gemma":[0.00030059746,0.000084324616,0.00012897878,0.00014590759,0.000088866655,0.0000942254,0.000020788148,0.00031384476,0.000010110803],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00077168853,0.0016794099,0.13232806,0.00007680398,0.00018858876,0.8569939,0.000324486,3.9890907e-7,0.0000175735,0.00002079669,0.00019341812,0.0074048457],"study_design_scores_gemma":[0.0039632237,0.0055012675,0.11209608,0.0013348189,0.00025852642,0.87562615,0.00024725558,0.000004828685,0.00029359123,0.000057436137,0.000507144,0.00010966511],"about_ca_topic_score_codex":0.00030785482,"about_ca_topic_score_gemma":0.00003605735,"teacher_disagreement_score":0.020231977,"about_ca_system_score_codex":0.000107959524,"about_ca_system_score_gemma":0.0004995936,"threshold_uncertainty_score":0.79183036},"labels":[],"label_agreement":null},{"id":"W2023350883","doi":"10.1503/cmaj.051038","title":"An elderly man with fever and hypodense lesions in the spleen and liver","year":2006,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Spleen; Muscle hypertrophy; Flank pain; Radiology; Internal medicine","score_opus":0.0051210568769608665,"score_gpt":0.22159953295209991,"score_spread":0.21647847607513904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2023350883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9911344,0.00027252606,0.000007378784,0.0067610806,0.00003305174,0.00010798541,0.0000069430253,0.0000047690373,0.0016718569],"genre_scores_gemma":[0.99652267,0.00009279882,0.000035133282,0.0028673678,0.0002899826,0.000003582027,0.000010756185,0.000006745042,0.0001709896],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99903095,0.00007864675,0.0001463977,0.00009465804,0.0004510032,0.00019832898],"domain_scores_gemma":[0.9991261,0.000049106347,0.00006527772,0.000059721275,0.000088023895,0.0006118189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004454018,0.000069982074,0.000110377776,0.000092755196,0.0001943278,0.0000660321,0.000022441258,0.000103493265,0.00022871219],"category_scores_gemma":[0.000082462386,0.000041902564,0.000019564293,0.000079907906,0.00003563969,0.000073491836,0.0000022775073,0.0002874727,0.000003447249],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000102167705,0.000095692514,0.9621813,0.0000051282705,0.00005046767,0.01126459,0.00022421288,6.785897e-7,0.0000018698943,0.00017315458,0.0058878134,0.020104872],"study_design_scores_gemma":[0.0012370452,0.00015856083,0.97442484,0.000044325167,0.00008283583,0.008466979,0.00020502348,0.00007457414,9.47151e-7,0.000110486035,0.015138278,0.000056103116],"about_ca_topic_score_codex":0.011679844,"about_ca_topic_score_gemma":0.10109689,"teacher_disagreement_score":0.08941704,"about_ca_system_score_codex":0.0002358683,"about_ca_system_score_gemma":0.00070541824,"threshold_uncertainty_score":0.9949015},"labels":[],"label_agreement":null},{"id":"W2027956868","doi":"10.1111/j.1939-1676.2001.tb02306.x","title":"Is Fatal <i>Rhodococcus equi</i> Pneumonia of Foals Only an Infection Acquired by the Perinate?","year":2001,"lang":"en","type":"article","venue":"Journal of Veterinary Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Medicine; Citation; Library science; Pneumonia; Gerontology; Internal medicine; Family medicine","score_opus":0.04444228624147719,"score_gpt":0.36144054149685834,"score_spread":0.31699825525538117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2027956868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937386,0.0012019296,0.0002904741,0.0015545869,0.0009111088,0.00023221115,0.000015205541,0.000018295927,0.002037576],"genre_scores_gemma":[0.99662036,0.0008334368,0.00003677172,0.00089978724,0.00072264165,0.00000504661,0.000013661151,0.000030622414,0.00083768845],"study_design_codex":"bench_or_experimental","study_design_gemma":"case_report","domain_scores_codex":[0.9978335,0.000107137676,0.0009755276,0.00018972598,0.00063941965,0.00025471873],"domain_scores_gemma":[0.9979092,0.00007672861,0.0009068402,0.00032627906,0.00046534507,0.0003155905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000488845,0.00025429466,0.00063618034,0.00021337195,0.000087346234,0.000017046654,0.00014031636,0.000084939435,0.00058597914],"category_scores_gemma":[0.00012777031,0.00014288894,0.00028167773,0.0001835427,0.0002337747,0.00028518122,0.000051923165,0.00025196804,0.000007736766],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009258433,0.0033533878,0.3417689,0.000391133,0.0023716323,0.030068176,0.0023979188,0.000010389385,0.53277475,0.00003664376,0.009908329,0.06766031],"study_design_scores_gemma":[0.012171328,0.08118385,0.33478862,0.0032882015,0.001853889,0.46124297,0.0006986124,0.00017051629,0.010263781,0.00020237612,0.09373962,0.00039623407],"about_ca_topic_score_codex":0.00044884285,"about_ca_topic_score_gemma":0.0000040225827,"teacher_disagreement_score":0.522511,"about_ca_system_score_codex":0.00017116127,"about_ca_system_score_gemma":0.00013058014,"threshold_uncertainty_score":0.64160603},"labels":[],"label_agreement":null},{"id":"W2028300114","doi":"10.1016/j.prp.2014.03.004","title":"Malakoplakia of liver: Report of two cases","year":2014,"lang":"en","type":"article","venue":"Pathology - Research and Practice","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Dr. Everett Chalmers Regional Hospital; Queen Elizabeth II Health Sciences Centre","funders":"","keywords":"Malakoplakia; Medicine; Pathology; Malacoplakia; Autopsy","score_opus":0.1022718558601771,"score_gpt":0.45813102816017204,"score_spread":0.3558591722999949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2028300114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94073343,0.00091464154,0.000056072156,0.0004420288,0.000053573665,0.00025277052,0.000010939792,0.000011591258,0.057524946],"genre_scores_gemma":[0.9975002,0.0007240093,0.00089068094,0.000050285504,0.000062073916,0.000016527416,0.000020013,0.0000090652275,0.0007271663],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9985469,0.00044400437,0.00026444916,0.00022622559,0.00030460933,0.00021380963],"domain_scores_gemma":[0.9965736,0.0020017822,0.00019730125,0.00033864003,0.0007405708,0.00014807857],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0024869328,0.00007421958,0.00025159045,0.00014937099,0.00008108612,0.0000059732906,0.000024708925,0.00006308949,0.00012092245],"category_scores_gemma":[0.00925461,0.000051913572,0.000042101074,0.00013560236,0.0003829731,0.00010365236,0.000058528465,0.00020094328,0.000009869783],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004057181,0.0042094737,0.5912724,0.0010101051,0.00060229015,0.3351427,0.0005953902,8.093229e-7,0.018864525,0.01011434,0.0011187624,0.03301199],"study_design_scores_gemma":[0.00474217,0.009075553,0.20492384,0.00021852332,0.0008369716,0.704857,0.0005028076,0.000058503017,0.01660004,0.002783336,0.055180773,0.00022047476],"about_ca_topic_score_codex":0.00061282975,"about_ca_topic_score_gemma":0.000029822604,"teacher_disagreement_score":0.38634858,"about_ca_system_score_codex":0.00001711576,"about_ca_system_score_gemma":0.0001571397,"threshold_uncertainty_score":0.99909085},"labels":[],"label_agreement":null},{"id":"W2036316917","doi":"10.1371/journal.pgen.1001145","title":"The Genome of a Pathogenic Rhodococcus: Cooptive Virulence Underpinned by Key Gene Acquisitions","year":2010,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; Horserace Betting Levy Board; Dorothy Russell Havemeyer Foundation; Grayson-Jockey Club Research Foundation","keywords":"Biology; Virulence; Pathogenicity island; Genome; Plasmid; Genetics; Gene; Genomic island; Rhodococcus equi; Microbiology; Horizontal gene transfer","score_opus":0.010340040336604586,"score_gpt":0.24884780995365663,"score_spread":0.23850776961705206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036316917","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99501944,0.0017418528,0.00012600768,0.00019015375,0.00012721936,0.0005309035,0.00022926136,0.000037844675,0.0019973],"genre_scores_gemma":[0.9983603,0.00045657542,0.0005176576,0.00019993374,0.000095169526,0.000064804764,0.00009406181,0.000028125345,0.00018336908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989389,0.000028981469,0.00028168786,0.0002181601,0.00025221676,0.00028005257],"domain_scores_gemma":[0.99875057,0.00007235228,0.00014887075,0.00051655516,0.0003148393,0.00019681541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008108105,0.00015061308,0.0001999059,0.000038813036,0.00020184954,0.000021217802,0.00007648665,0.000084754334,0.000116661206],"category_scores_gemma":[0.000070358634,0.000105118124,0.000117056254,0.00014013406,0.00018522491,0.000020672269,0.00004391919,0.00014396996,0.00003504917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006551645,0.00087250606,0.011792529,0.000037058042,0.0005168641,0.000118030584,0.00013062719,0.0000069394277,0.98540044,0.00036832108,0.0001536937,0.0005374753],"study_design_scores_gemma":[0.0040602423,0.0015513303,0.058706317,0.00010112926,0.0028287314,0.0008105391,0.00033044087,0.001189909,0.9178608,0.0018955257,0.010026063,0.0006389839],"about_ca_topic_score_codex":0.0000062260783,"about_ca_topic_score_gemma":0.000012319128,"teacher_disagreement_score":0.067539655,"about_ca_system_score_codex":0.00004747115,"about_ca_system_score_gemma":0.0001879824,"threshold_uncertainty_score":0.42865926},"labels":[],"label_agreement":null},{"id":"W2039963072","doi":"10.1016/j.vaccine.2007.10.069","title":"Safety and immunogenicity of a live-attenuated auxotrophic candidate vaccine against the intracellular pathogen Rhodococcus equi","year":2007,"lang":"en","type":"article","venue":"Vaccine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Rhodococcus equi; Immunogenicity; Virology; Vaccination; Virulence; Attenuated vaccine; Microbiology; Pathogen; Immune system; Biology; Immunization; Immunity; Immunology","score_opus":0.008208048702555992,"score_gpt":0.24767473209484503,"score_spread":0.23946668339228905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039963072","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.993048,0.004593446,0.0002141549,0.00044603433,0.00012390834,0.00079808274,0.00006148185,0.00006407038,0.0006508098],"genre_scores_gemma":[0.9978208,0.001274425,0.00006041962,0.00026960915,0.00013663826,0.000010358814,0.00017211541,0.000036036978,0.00021959997],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983213,0.000055569002,0.00066515483,0.0003232659,0.00023864959,0.00039606],"domain_scores_gemma":[0.998588,0.0000911512,0.00029495923,0.0005640636,0.00024653922,0.00021524268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006393664,0.00026538357,0.0005115157,0.00013147382,0.00018796464,0.000013891923,0.00006968392,0.00010576268,0.00020644753],"category_scores_gemma":[0.000121077064,0.00016427484,0.00015170733,0.0003121787,0.000022752618,0.000056432516,0.00008952035,0.00020329366,0.000018625511],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0077485,0.0015809156,0.63479054,0.00037683191,0.0026192178,0.0071799234,0.0008998673,0.000046993573,0.30416572,0.00020647461,0.00033946979,0.040045545],"study_design_scores_gemma":[0.011939912,0.0009916315,0.9534605,0.0002359622,0.0014807327,0.0016010931,0.0001918115,0.00039660904,0.023511147,0.00008724859,0.005742174,0.00036117862],"about_ca_topic_score_codex":0.0005781595,"about_ca_topic_score_gemma":0.00011257399,"teacher_disagreement_score":0.31866995,"about_ca_system_score_codex":0.000115701936,"about_ca_system_score_gemma":0.00011243404,"threshold_uncertainty_score":0.6698933},"labels":[],"label_agreement":null},{"id":"W2043471331","doi":"10.1097/mpa.0b013e3181a9f12a","title":"Emphysematous Pancreatitis","year":2009,"lang":"fr","type":"review","venue":"Pancreas","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Saskatchewan; Royal University Hospital","funders":"","keywords":"Medicine; Pancreatitis; Necrotizing pancreatitis; Context (archaeology); Acute pancreatitis; Intensive care unit; Intensive care medicine; General surgery; Internal medicine; Surgery","score_opus":0.024770185189505287,"score_gpt":0.31881658145350666,"score_spread":0.29404639626400136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043471331","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073569414,0.84287673,0.00002136955,0.000047110738,0.001757587,0.001862697,0.00024238482,0.00022627045,0.15223014],"genre_scores_gemma":[0.0047143754,0.9693685,0.00015732413,0.00034407518,0.0035442917,0.00029008524,0.0012416589,0.00019071,0.02014896],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99525875,0.0003282122,0.0013329353,0.0010989282,0.0006865942,0.0012945938],"domain_scores_gemma":[0.9962631,0.00025264468,0.00075276406,0.0013229727,0.00026548863,0.001143057],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0003186069,0.00128256,0.0039906963,0.00028405758,0.0003093982,0.00011272617,0.00015864793,0.0007218576,0.0060500386],"category_scores_gemma":[0.0003258904,0.0010531057,0.0018390252,0.00054319215,0.0001838011,0.00012673496,0.000068936926,0.000624695,0.011704515],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000292831,0.0013462964,0.003668679,0.018193899,0.0026381256,0.030774374,0.00003557172,4.6471837e-7,8.0004935e-7,0.0019087347,0.0046158195,0.93678796],"study_design_scores_gemma":[0.001122676,0.000519846,0.003963807,0.040145107,0.01886822,0.025398022,0.000010628421,0.000006792957,0.0000052933196,0.0003050065,0.9088213,0.00083331956],"about_ca_topic_score_codex":0.0007842984,"about_ca_topic_score_gemma":0.000012056452,"teacher_disagreement_score":0.93595463,"about_ca_system_score_codex":0.0011397554,"about_ca_system_score_gemma":0.0015457327,"threshold_uncertainty_score":0.9999926},"labels":[],"label_agreement":null},{"id":"W2043480113","doi":"10.1128/jcm.41.9.4468-4470.2003","title":"Virulence of <i>Rhodococcus equi</i> Isolated from Cats and Dogs","year":2003,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Japan Society for the Promotion of Science","keywords":"Rhodococcus equi; Virulence; Plasmid; Microbiology; Biology; Virology; Gene; Genetics","score_opus":0.03859355041946744,"score_gpt":0.3726843604045872,"score_spread":0.33409080998511975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043480113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964282,0.0018773981,0.000102247475,0.00012650425,0.0005592705,0.0000995994,0.000023951528,0.0000046148107,0.00077819574],"genre_scores_gemma":[0.99794185,0.00072506705,0.0005499854,0.00060123496,0.0001113261,5.199076e-7,0.0000069073753,0.00000860773,0.00005452543],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982462,0.00019132103,0.0012233825,0.00015394419,0.00004138255,0.0001437847],"domain_scores_gemma":[0.99807656,0.0004491339,0.00087414,0.00014925489,0.00026365637,0.00018722728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055261445,0.00010844994,0.0007553958,0.00005755672,0.000023166584,0.0000038804164,0.000036309153,0.00019165392,0.00017952015],"category_scores_gemma":[0.00077989715,0.0000718134,0.00025101687,0.000058789108,0.00020173084,0.000035885074,0.000018501196,0.00027320176,0.00000799893],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014965734,0.0016836735,0.85466546,0.00004633349,0.0013022078,0.0017399925,0.000070280585,0.0000014681557,0.13051745,0.00011896474,0.0013186713,0.0070389207],"study_design_scores_gemma":[0.04933595,0.024528962,0.6758717,0.0015576648,0.0060723545,0.050643444,0.00017062153,0.000025033858,0.05046682,0.0062765633,0.13417488,0.00087605655],"about_ca_topic_score_codex":0.00003097159,"about_ca_topic_score_gemma":0.0000034252264,"teacher_disagreement_score":0.17879382,"about_ca_system_score_codex":0.000017967415,"about_ca_system_score_gemma":0.00023955482,"threshold_uncertainty_score":0.29284656},"labels":[],"label_agreement":null},{"id":"W2043731014","doi":"10.1007/s00251-004-0670-5","title":"Nramp1 deletion does not confer susceptibility to Rhodococcus equi infection in mice","year":2004,"lang":"en","type":"article","venue":"Immunogenetics","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Rhodococcus equi; Biology; Intracellular parasite; Microbiology; Intracellular; Virulence; Bacteria; Mycobacterium tuberculosis; Mycobacterium; Tuberculosis; Gene; Virology; Pathogen; Genetics","score_opus":0.01856715850739352,"score_gpt":0.3017263904386058,"score_spread":0.28315923193121223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2043731014","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997046,0.00017400966,0.0005365667,0.00016750072,0.00036833718,0.00092645467,0.000015608308,0.00006915351,0.0006963733],"genre_scores_gemma":[0.9986044,0.0001949827,0.0004604087,0.0003700661,0.000084011626,0.00008366817,0.000053226875,0.000025080237,0.00012416489],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988035,0.00003418058,0.00036040583,0.00031264347,0.00020868794,0.00028059017],"domain_scores_gemma":[0.9992354,0.000017603372,0.00007154415,0.00034553165,0.0001903482,0.00013960691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000158639,0.00017960591,0.00023909747,0.0001397405,0.00006977426,0.00002906666,0.000029598279,0.00011412984,0.000095907126],"category_scores_gemma":[0.00008059808,0.00014241398,0.00010766563,0.00020394482,0.000046263416,0.000043600718,0.000038028178,0.00011964889,0.00011526169],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005720467,0.0018964325,0.75319314,0.00013607636,0.0001778442,0.0005132803,0.00053096755,0.001577189,0.22799808,0.00015222821,0.00001812116,0.013234629],"study_design_scores_gemma":[0.0035587754,0.0010097453,0.80236965,0.00014499428,0.00018975358,0.0002936582,0.00004224565,0.000015185706,0.18893504,0.00036184868,0.0028135022,0.00026557173],"about_ca_topic_score_codex":0.0023310895,"about_ca_topic_score_gemma":0.00091908564,"teacher_disagreement_score":0.049176566,"about_ca_system_score_codex":0.0005582477,"about_ca_system_score_gemma":0.00019496918,"threshold_uncertainty_score":0.58074737},"labels":[],"label_agreement":null},{"id":"W2047216648","doi":"10.1016/j.vetmic.2007.10.020","title":"A mycolyl transferase mutant of Rhodococcus equi lacking capsule integrity is fully virulent","year":2007,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhodococcus equi; Virulence; Biology; Microbiology; Mutant; Virulence factor; Bacterial capsule; Pathogen; Gene; Genetics","score_opus":0.0418270401468844,"score_gpt":0.33090717199395053,"score_spread":0.28908013184706616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2047216648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963282,0.0004690354,0.00037759574,0.000083649364,0.00028591964,0.00049166067,0.00018381728,0.00005956324,0.001720596],"genre_scores_gemma":[0.99886215,0.0000667687,0.00024812223,0.00049309846,0.00007434686,0.000014371382,0.00011128466,0.000024745732,0.00010509892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986051,0.000054755583,0.0005013953,0.0003591168,0.000060708968,0.0004189758],"domain_scores_gemma":[0.9992314,0.00004041131,0.00012024387,0.00032774633,0.00012653445,0.00015368579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003004958,0.00023073154,0.00047188732,0.00016779389,0.000070736234,0.0000052942046,0.000056601166,0.00019268914,0.00061223336],"category_scores_gemma":[0.000024339155,0.00018610746,0.00023660113,0.0001361475,0.0001591744,0.000038535632,0.00004859774,0.00021617797,0.00004048678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008581241,0.0008048718,0.0028885105,0.00016953931,0.00027360447,0.006482871,0.0003498481,2.9139105e-7,0.9846365,0.00005229621,0.00011751629,0.003366059],"study_design_scores_gemma":[0.0044948994,0.0075969533,0.010256262,0.0002840511,0.00045774368,0.031960722,0.00019968516,0.000010144712,0.92591524,0.000081902035,0.018347563,0.0003948522],"about_ca_topic_score_codex":0.00019144693,"about_ca_topic_score_gemma":0.000010022054,"teacher_disagreement_score":0.058721248,"about_ca_system_score_codex":0.00015746693,"about_ca_system_score_gemma":0.00013607096,"threshold_uncertainty_score":0.7589242},"labels":[],"label_agreement":null},{"id":"W2052584125","doi":"10.1074/jbc.m203008200","title":"A Novel Lipoarabinomannan from the Equine PathogenRhodococcus equi","year":2002,"lang":"en","type":"article","venue":"Journal of Biological Chemistry","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Horserace Betting Levy Board; Colorado State University","keywords":"Lipoarabinomannan; Rhodococcus equi; Chemistry; Cytokine; Concanavalin A; Microbiology; Biology; Biochemistry; Virulence; Molecular biology; Mycobacterium tuberculosis; Tuberculosis; Immunology; Medicine; Gene","score_opus":0.0606233981496852,"score_gpt":0.27380725647278364,"score_spread":0.21318385832309844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052584125","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912949,0.0028197675,0.00006758579,0.0007381486,0.00009611287,0.00007907528,0.000031840707,0.000016290132,0.0048562847],"genre_scores_gemma":[0.99792576,0.00025320705,0.00017891158,0.00047020792,0.0008427755,0.0000033680112,0.000014897672,0.00000767482,0.00030322417],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990763,0.0000153602,0.0003945789,0.00013900438,0.00019351866,0.00018123933],"domain_scores_gemma":[0.9990517,0.00009944455,0.0003100157,0.00019962563,0.00014100602,0.00019824704],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00013557498,0.00013911024,0.00029659818,0.000009817927,0.000066010034,0.000018638548,0.00008712169,0.00013070017,0.0018378258],"category_scores_gemma":[0.00028040164,0.00006380547,0.00030296133,0.00007371279,0.00009371921,0.000028023527,0.00003838232,0.00025986554,0.00001818412],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024892358,0.0021550276,0.094815075,0.000026194286,0.00064405205,0.0044900486,0.00006720166,0.0000024744022,0.88546556,0.0000074055865,0.0031697338,0.008908322],"study_design_scores_gemma":[0.025251329,0.006565272,0.45556566,0.0011105591,0.0034018697,0.06870992,0.00061606383,0.00040561886,0.3261306,0.0015030986,0.10942217,0.0013178323],"about_ca_topic_score_codex":0.0000067550695,"about_ca_topic_score_gemma":1.5612666e-7,"teacher_disagreement_score":0.55933493,"about_ca_system_score_codex":0.00006999045,"about_ca_system_score_gemma":0.00003351209,"threshold_uncertainty_score":0.99907464},"labels":[],"label_agreement":null},{"id":"W2053587404","doi":"10.1155/2010/970805","title":"Xanthogranulomatous Salpingitis Associated with a Large Uterine Leiomyoma","year":2010,"lang":"en","type":"article","venue":"Case Reports in Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Endometriosis; Medicine; Salpingitis; Etiology; Leiomyoma; Uterine leiomyoma; Pelvic inflammatory disease; Pathology; Pathogenesis; Inflammation; Disease; Gynecology; Internal medicine","score_opus":0.010362605988937365,"score_gpt":0.30142705021512,"score_spread":0.29106444422618266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2053587404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856411,0.00029002468,0.00007988268,0.00035130186,0.00072461425,0.00078970136,0.000015577643,0.00024340845,0.0118643595],"genre_scores_gemma":[0.9979232,0.000031680043,0.0001708091,0.00034615162,0.0003143071,0.00010316889,0.00022042106,0.00007064976,0.00081964344],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9974387,0.000037352936,0.0008267491,0.000594948,0.00052622275,0.00057598436],"domain_scores_gemma":[0.9979556,0.000087799395,0.0004147178,0.0007950323,0.00028083354,0.00046599694],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007554942,0.00035917934,0.0008129114,0.0003902678,0.00015430355,0.000017115977,0.000024103054,0.00019267913,0.0010039432],"category_scores_gemma":[0.00089769537,0.00024428114,0.00010884259,0.00058642315,0.0002608718,0.00009538436,0.000036231293,0.0005176493,0.0000058469627],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006258338,0.00065849966,0.26140255,0.000076496275,0.00017847678,0.73451453,0.00015203765,4.6240598e-7,0.00065616454,0.00005802395,0.00042606134,0.0018141221],"study_design_scores_gemma":[0.0046992684,0.0007396095,0.14085922,0.0007300695,0.0004465016,0.84162676,0.00013210757,0.000071568524,0.00025878192,0.00009669412,0.010072409,0.0002670306],"about_ca_topic_score_codex":0.00045119607,"about_ca_topic_score_gemma":0.0013767481,"teacher_disagreement_score":0.120543346,"about_ca_system_score_codex":0.0001278954,"about_ca_system_score_gemma":0.0002448029,"threshold_uncertainty_score":0.9999093},"labels":[],"label_agreement":null},{"id":"W2064210690","doi":"10.5489/cuaj.1057","title":"Managment of renocolic fistula following abdominal trauma from a gunshot: Two cases report","year":2014,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"GUNSHOT INJURY; Medicine; Fistula; Gunshot wound; Abdominal trauma; Surgery; Radiology; General surgery; Blunt","score_opus":0.013459424867829145,"score_gpt":0.2603211601459318,"score_spread":0.24686173527810268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2064210690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9866352,0.00014548795,0.000057976387,0.001914228,0.0003807489,0.00021271515,0.000030780615,0.00001631809,0.010606522],"genre_scores_gemma":[0.9978704,0.000010221269,0.00020229333,0.0010303092,0.0004622267,0.000013230485,0.00010274373,0.000012301873,0.0002962996],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9983189,0.00012907811,0.00055687,0.00021671735,0.00041288603,0.00036553497],"domain_scores_gemma":[0.99822766,0.00016005998,0.00052101363,0.00016930334,0.00018706641,0.00073489116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062011904,0.00014792557,0.00040730872,0.00015291448,0.00022305927,0.00004495011,0.000048454815,0.00013389089,0.00071548513],"category_scores_gemma":[0.0010208179,0.000117894015,0.00035618845,0.00012059628,0.00002188075,0.00005644512,0.0000072641005,0.00025109734,0.0000127027415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006400268,0.00016170516,0.9710449,0.00000534598,0.0005988442,0.018739238,0.000056107652,0.000021250844,0.00006610181,0.00008226986,0.0022385009,0.006921759],"study_design_scores_gemma":[0.0026372678,0.0005116305,0.95624113,0.000053496504,0.0007972792,0.0067969514,0.000039710874,0.00011743351,0.00009891871,0.0011991638,0.031350233,0.00015679799],"about_ca_topic_score_codex":0.008854031,"about_ca_topic_score_gemma":0.0020701876,"teacher_disagreement_score":0.02911173,"about_ca_system_score_codex":0.0010434737,"about_ca_system_score_gemma":0.000349254,"threshold_uncertainty_score":0.9977461},"labels":[],"label_agreement":null},{"id":"W2069236734","doi":"10.5489/cuaj.472","title":"Emphysematous cystitis: The role of CT imaging and appropriate treatment","year":2013,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Diabetes mellitus; Glycemic; Urinary system; Lumen (anatomy); Computed tomography; Disease; Radiology; Urology; Surgery; Internal medicine","score_opus":0.00443036522596548,"score_gpt":0.2020826598692673,"score_spread":0.1976522946433018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2069236734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9898688,0.001400606,0.0000030648582,0.0037454313,0.00007447253,0.00024910644,0.000010904606,0.000010407753,0.0046371627],"genre_scores_gemma":[0.9989954,0.0001138573,0.000023362232,0.00056390185,0.00011647996,0.000019375779,0.000006214026,0.0000062568274,0.00015511754],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99928534,0.000056145876,0.00019802658,0.00009410997,0.0001414242,0.00022494329],"domain_scores_gemma":[0.9991707,0.000045431658,0.00018775188,0.00007255029,0.00015826728,0.00036528165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012302377,0.000088013956,0.00017204203,0.00005911123,0.00020093533,0.000058335896,0.000022030454,0.000031938103,0.0002885525],"category_scores_gemma":[0.000107413325,0.000048048165,0.00008894222,0.00005660768,0.000030179492,0.000054821878,0.000005267703,0.00010934031,0.000021430364],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000046757855,0.0000564806,0.96685445,0.000001729268,0.00016896216,0.00026269755,0.000063012914,0.0000032289493,0.00004425579,0.0001050172,0.0002622844,0.032173194],"study_design_scores_gemma":[0.00073845487,0.0001871051,0.9809579,0.000009783035,0.00020052398,0.0032537444,0.00015283757,0.00027853652,0.000042720898,0.0028412975,0.011276563,0.000060487175],"about_ca_topic_score_codex":0.006913696,"about_ca_topic_score_gemma":0.00014973783,"teacher_disagreement_score":0.032112706,"about_ca_system_score_codex":0.00050583214,"about_ca_system_score_gemma":0.00023815439,"threshold_uncertainty_score":0.99969935},"labels":[],"label_agreement":null},{"id":"W2075023921","doi":"10.5489/cuaj.1259","title":"Emphysematous cystitis: An atypical multi-organism presentation","year":2014,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Northern College; University of Manitoba; NOSM University","funders":"","keywords":"Presentation (obstetrics); Klebsiella pneumoniae; Medicine; Gross hematuria; Lower abdominal pain; Urinary bladder; Tenderness; Abdominal pain; Surgery; Escherichia coli; Biology","score_opus":0.011942231492688709,"score_gpt":0.25563879176119386,"score_spread":0.24369656026850514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075023921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9931898,0.0000509347,0.0010252867,0.0027960483,0.0003784767,0.00020362745,0.000014785692,0.00005954874,0.0022814663],"genre_scores_gemma":[0.9960755,0.000012730085,0.00033455645,0.0024875693,0.00058112363,0.000008367651,0.00006591527,0.000014983796,0.00041921806],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987152,0.00017115881,0.00027683738,0.00018401537,0.00028809792,0.0003646666],"domain_scores_gemma":[0.99823916,0.000048906626,0.00019397514,0.00011198512,0.0002817791,0.0011242229],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032852901,0.00012138666,0.00021363232,0.00011616511,0.0003273881,0.000101115584,0.000042560663,0.00020054648,0.0006067123],"category_scores_gemma":[0.0006526297,0.00009685262,0.00011343714,0.00009789259,0.000021552349,0.00012785308,0.0000060683333,0.00029554855,0.00012677496],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041430332,0.00025767987,0.9926294,0.000004459712,0.00013637837,0.00073177135,0.00007618537,0.00003173371,0.000083889456,0.00041321304,0.0019272127,0.0036666237],"study_design_scores_gemma":[0.0014866721,0.0004528454,0.9810723,0.000008452131,0.00015361758,0.001994788,0.000024131488,0.0007355269,0.000027514345,0.000744205,0.013188192,0.00011176496],"about_ca_topic_score_codex":0.0007281155,"about_ca_topic_score_gemma":0.00062688126,"teacher_disagreement_score":0.011557132,"about_ca_system_score_codex":0.0008107269,"about_ca_system_score_gemma":0.00034754298,"threshold_uncertainty_score":0.6643074},"labels":[],"label_agreement":null},{"id":"W2080808833","doi":"10.5489/cuaj.1865","title":"Emphysematous cystitis and necrotizing fasciitis","year":2014,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Medicine; Fasciitis; Concomitant; Cystoprostatectomy; Surgery; Klebsiella pneumoniae; Internal medicine; Cystectomy","score_opus":0.005619002041915258,"score_gpt":0.20829546597224008,"score_spread":0.20267646393032482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2080808833","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98167044,0.00017816338,0.00010104824,0.0050445735,0.00022744278,0.00010971573,0.000009978843,0.000028340037,0.012630273],"genre_scores_gemma":[0.9962119,0.000051733787,0.00010179668,0.0029554805,0.00032421952,0.0000041683174,0.000010191558,0.000008521839,0.00033201728],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991362,0.00006651893,0.00018635695,0.00012958991,0.00017854302,0.0003027657],"domain_scores_gemma":[0.9987839,0.000058831225,0.00013494967,0.00006158058,0.00014821,0.00081255025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028246772,0.00009136479,0.00019368177,0.00010172513,0.00031577196,0.00009408088,0.000015624844,0.000120176446,0.00028453025],"category_scores_gemma":[0.0005528077,0.00007246803,0.00008033999,0.00007333036,0.000020313782,0.000057637397,0.000006375547,0.00021440665,0.000035531346],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000070531537,0.000028069871,0.9842624,0.000004705309,0.00009951376,0.0012114726,0.000031721316,0.0000031349928,0.000017550557,0.0004784326,0.002462178,0.011393771],"study_design_scores_gemma":[0.0008519716,0.00025970305,0.9345886,0.000016848273,0.00012255818,0.0083791055,0.0000133999965,0.00014518146,0.0000070583405,0.0012809503,0.054241206,0.000093386494],"about_ca_topic_score_codex":0.0010290802,"about_ca_topic_score_gemma":0.00036014747,"teacher_disagreement_score":0.051779028,"about_ca_system_score_codex":0.00048089286,"about_ca_system_score_gemma":0.00019554705,"threshold_uncertainty_score":0.31154066},"labels":[],"label_agreement":null},{"id":"W2081328216","doi":"10.14740/jmc.v5i6.1799","title":"Emphysematous Pyelonephritis in Two Cases at Two Different Stages: Early and Late","year":2014,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Renal parenchyma; Parenchyma; Adipose capsule of kidney; Urinary system; Diabetes mellitus; Radiological weapon; Radiology; Pathology; Internal medicine; Gastroenterology; Kidney; Endocrinology","score_opus":0.017047306892242462,"score_gpt":0.31991227648356657,"score_spread":0.3028649695913241,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2081328216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99688804,0.0018526338,0.000014656971,0.00064245303,0.00021899074,0.00012920944,0.000007894662,0.000014772467,0.00023137155],"genre_scores_gemma":[0.99818635,0.0008029254,0.000023588049,0.00044735023,0.00037781883,0.0000046599516,0.000005015706,0.000020066822,0.00013224184],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99795127,0.00010428649,0.0005860237,0.00016105434,0.0009474877,0.000249907],"domain_scores_gemma":[0.99834603,0.0004371351,0.00026580293,0.00014185463,0.000107340704,0.0007018221],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038879627,0.0001786893,0.0005787377,0.00017724141,0.000069639325,0.000029478522,0.000045092842,0.000068065936,0.00042361082],"category_scores_gemma":[0.0009930042,0.000115879455,0.00014841044,0.00007902844,0.00012134203,0.00008101166,0.000058204732,0.00029058152,0.00000663629],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056203816,0.0008999434,0.75097746,0.00017292346,0.00020614843,0.22365639,0.00021746915,0.0000023862908,0.00014218691,0.00007551415,0.00046297675,0.022624573],"study_design_scores_gemma":[0.012877122,0.002282998,0.8006503,0.0015770814,0.00046423316,0.17907505,0.000057666384,0.00010639824,0.00045952745,0.00023976194,0.0020039477,0.00020593299],"about_ca_topic_score_codex":0.00067529816,"about_ca_topic_score_gemma":0.00056350435,"teacher_disagreement_score":0.049672835,"about_ca_system_score_codex":0.00014223684,"about_ca_system_score_gemma":0.00012968793,"threshold_uncertainty_score":0.4725427},"labels":[],"label_agreement":null},{"id":"W2087143494","doi":"10.5489/cuaj.10024","title":"Emphysematous pyelitis, ureteritis and cystitis","year":2010,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Queen's University","funders":"","keywords":"Medicine; Dysuria; Percutaneous nephrostomy; Nephrostomy; Surgery; Ureter; Extracorporeal shock wave lithotripsy; Urinalysis; Urology; Emergency department; Urinary system; Lithotripsy; Percutaneous; Internal medicine","score_opus":0.004389188297743832,"score_gpt":0.21280823164430196,"score_spread":0.20841904334655814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2087143494","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9865315,0.00016644869,0.000006043058,0.0051217503,0.00046753418,0.00010766522,0.00003939041,0.000025759355,0.0075339386],"genre_scores_gemma":[0.9967845,0.00007964651,0.00010503354,0.0021934423,0.0004603522,0.0000059456997,0.000019651605,0.000009192173,0.00034225223],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991674,0.00003135352,0.00018733324,0.00013214111,0.0001771341,0.00030467627],"domain_scores_gemma":[0.99864507,0.0000348492,0.000116354255,0.00007072277,0.00017722999,0.0009558002],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018361627,0.0000938865,0.00017627071,0.00009211116,0.00022831484,0.00010061565,0.000022008453,0.0001829197,0.0009816922],"category_scores_gemma":[0.0004102219,0.0000763428,0.000081184175,0.0000634489,0.00003184687,0.00006268323,0.000006290184,0.0004286839,0.00003297008],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008947555,0.00003448889,0.98507726,0.0000037905086,0.000098789795,0.0035529083,0.00002453414,1.7781043e-7,0.0001667089,0.00042197772,0.0034831292,0.0071273013],"study_design_scores_gemma":[0.0006534494,0.00016864117,0.90399194,0.000007451013,0.00009019128,0.01649539,0.0000074679765,0.000011087615,0.000011601665,0.0009802472,0.077501215,0.00008133018],"about_ca_topic_score_codex":0.0011936207,"about_ca_topic_score_gemma":0.0012157398,"teacher_disagreement_score":0.08108532,"about_ca_system_score_codex":0.0002533826,"about_ca_system_score_gemma":0.0003240199,"threshold_uncertainty_score":0.9999316},"labels":[],"label_agreement":null},{"id":"W2088359223","doi":"","title":"Acute Emphasematous Cholecystitis","year":2014,"lang":"en","type":"article","venue":"Journal of Current Surgery","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Cholecystitis; Cholecystectomy; Gallbladder; Perforation; Abdominal pain; Lumen (anatomy); Radiology; Epigastric pain; Surgery; Gangrene","score_opus":0.0245779289957251,"score_gpt":0.32035100949677,"score_spread":0.2957730805010449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088359223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99292004,0.0018496261,0.00076812593,0.00017154633,0.0023850452,0.00007236861,0.0000046571154,0.00001905391,0.0018095134],"genre_scores_gemma":[0.99858844,0.00049705786,0.000022255752,0.00012914371,0.00065558526,0.0000020083198,0.000010092609,0.000014393138,0.00008099286],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988649,0.000035840225,0.0005066947,0.000085868734,0.00034206422,0.0001646645],"domain_scores_gemma":[0.9987765,0.00010539127,0.0004518088,0.00014144018,0.0002592614,0.0002655922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031641027,0.00011225467,0.00044855918,0.00022768503,0.000045938858,0.000019559293,0.000021181391,0.000032826974,0.00014993791],"category_scores_gemma":[0.0001393611,0.00007918909,0.00044337517,0.00010121277,0.00002531886,0.00010050665,0.000008344447,0.00014426385,0.000029102324],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052480993,0.002740626,0.65545785,0.00035929712,0.0015640111,0.011304533,0.00006912143,0.000005581225,0.00044822023,0.0003039966,0.07241641,0.25480556],"study_design_scores_gemma":[0.007808294,0.0010822057,0.2960068,0.0033595052,0.0046461388,0.090620816,0.000018278797,0.00007295602,0.0069411616,0.0007827836,0.58805174,0.000609314],"about_ca_topic_score_codex":0.0000010696883,"about_ca_topic_score_gemma":1.6975008e-7,"teacher_disagreement_score":0.5156353,"about_ca_system_score_codex":0.00006565793,"about_ca_system_score_gemma":0.000221954,"threshold_uncertainty_score":0.32292375},"labels":[],"label_agreement":null},{"id":"W2088766561","doi":"10.5489/cuaj.700","title":"Pyélonéphrite xanthogranulomateuse bilatérale focale : à propos d’un cas","year":2014,"lang":"fr","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Gynecology","score_opus":0.007100525902455331,"score_gpt":0.21975942829280326,"score_spread":0.21265890239034793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088766561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88943267,0.009930979,0.00031832332,0.06394838,0.008348272,0.0008236168,0.00023621682,0.00012583264,0.026835738],"genre_scores_gemma":[0.9822229,0.00082624535,0.00017794433,0.004312078,0.0035692502,0.000019569456,0.00006086518,0.00004803695,0.008763089],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99613273,0.0005909585,0.00075286004,0.00041081678,0.0006014566,0.0015111944],"domain_scores_gemma":[0.9954474,0.00022557439,0.00059869804,0.00026300867,0.00056668185,0.0028986216],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.001444345,0.0003749616,0.00059791654,0.0003006541,0.0009241656,0.00026479035,0.00012451167,0.0007061209,0.0058119516],"category_scores_gemma":[0.0015741091,0.00031624458,0.00045672085,0.0003466272,0.0001221038,0.00020736341,0.00002503718,0.0009970259,0.0011084373],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048434817,0.00046052987,0.91391534,0.000035379253,0.0006755669,0.005709234,0.00018097473,0.00005033896,0.000028119422,0.0012025946,0.019952938,0.057740543],"study_design_scores_gemma":[0.002364364,0.0009892664,0.52194446,0.0001073946,0.0009471475,0.0069220774,0.000050005903,0.00076830055,0.00004470857,0.0025808634,0.4629174,0.00036403438],"about_ca_topic_score_codex":0.004956135,"about_ca_topic_score_gemma":0.001965469,"teacher_disagreement_score":0.44296446,"about_ca_system_score_codex":0.0032424117,"about_ca_system_score_gemma":0.0011856696,"threshold_uncertainty_score":0.99992895},"labels":[],"label_agreement":null},{"id":"W2091245131","doi":"10.2460/ajvr.2001.62.1307","title":"Evaluation of equine immunoglobulin specific for Rhodococcus equi virulence-associated proteins A and C for use in protecting foals against Rhodococcus equi-induced pneumonia","year":2001,"lang":"en","type":"article","venue":"American Journal of Veterinary Research","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhodococcus equi; Pony; Pneumonia; Medicine; Bronchoalveolar lavage; Antibody; Immunology; Foal; Horse; Immunoglobulin G; Virulence; Lung; Microbiology; Biology; Internal medicine","score_opus":0.37384551764581,"score_gpt":0.48311284261571874,"score_spread":0.10926732496990876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2091245131","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940543,0.00055060675,0.0002962801,0.00016881022,0.00008133371,0.0047021834,0.000033554104,0.000012098036,0.0001007907],"genre_scores_gemma":[0.9975616,0.00032895035,0.0013046969,0.00001862333,0.00011346988,0.00058288465,0.000015451202,0.000048126,0.000026243244],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99578935,0.0009397674,0.0010050741,0.00034993567,0.0012666011,0.0006492548],"domain_scores_gemma":[0.9945882,0.0008664614,0.0009059566,0.00030042123,0.0030985961,0.00024039211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.009444824,0.00022710889,0.0007762058,0.0007038519,0.00022106773,0.00006661991,0.00011715017,0.00008139526,0.000018325685],"category_scores_gemma":[0.003752322,0.00019043246,0.00023161252,0.00076225336,0.00024138014,0.00028973314,0.000083972714,0.00045349527,9.1026595e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008381317,0.0018999511,0.02643613,0.00020833495,0.00065663166,0.0014470456,0.0005487801,0.00005051935,0.6399156,0.0000064723895,0.000017645974,0.32043162],"study_design_scores_gemma":[0.07548938,0.41202953,0.42158583,0.010869894,0.0018938949,0.012132197,0.007705387,0.013770104,0.038408946,0.0019212572,0.0025399057,0.0016536885],"about_ca_topic_score_codex":0.00031432937,"about_ca_topic_score_gemma":0.000015563497,"teacher_disagreement_score":0.6015066,"about_ca_system_score_codex":0.00091836724,"about_ca_system_score_gemma":0.000863948,"threshold_uncertainty_score":0.776561},"labels":[],"label_agreement":null},{"id":"W2093452238","doi":"10.1111/j.1939-1676.2011.00835.x","title":"Diagnosis, Treatment, Control, and Prevention of Infections Caused by <i>R</i> <i>hodococcus equi</i> in Foals","year":2011,"lang":"en","type":"article","venue":"Journal of Veterinary Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":156,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhodococcus equi; Medicine; Pneumonia; Pathogen; Disease; Facultative; Intensive care medicine; Immunology; Microbiology; Internal medicine; Virulence; Biology","score_opus":0.05293046422992888,"score_gpt":0.3425677621907154,"score_spread":0.2896372979607865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093452238","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936935,0.0032004518,0.00023917822,0.00017988574,0.00033659913,0.00031892883,0.000015056615,0.0000083684345,0.0020080602],"genre_scores_gemma":[0.99672014,0.0027510433,0.00004877798,0.00012681722,0.0001461285,0.00002701438,0.000004930965,0.000016774387,0.0001583548],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985467,0.00008989789,0.0008467596,0.00013813682,0.00021470564,0.00016379742],"domain_scores_gemma":[0.9987106,0.0001094393,0.0006625278,0.00013599431,0.0001703713,0.00021110456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026556366,0.000184946,0.00067549816,0.00029941305,0.000025428262,0.000004067201,0.00003931809,0.000064071544,0.00020803318],"category_scores_gemma":[0.00011600742,0.00012232467,0.00015855447,0.000111834415,0.00012956368,0.00015135568,0.000015812922,0.0001419037,0.0000011459801],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026676448,0.0044165957,0.92326796,0.0002099123,0.0013876503,0.008840908,0.0010180863,8.714804e-7,0.035351824,0.000023418785,0.0012778359,0.021537287],"study_design_scores_gemma":[0.05112621,0.15509395,0.7319445,0.006457607,0.003231157,0.029340027,0.0004277589,0.00002362872,0.0114636775,0.0007497391,0.009798621,0.00034311347],"about_ca_topic_score_codex":0.00044113916,"about_ca_topic_score_gemma":0.000018241006,"teacher_disagreement_score":0.19132346,"about_ca_system_score_codex":0.00015617059,"about_ca_system_score_gemma":0.00007632495,"threshold_uncertainty_score":0.49882552},"labels":[],"label_agreement":null},{"id":"W2093517402","doi":"10.1016/j.vetmic.2010.06.018","title":"The sensor kinase MprB is required for Rhodococcus equi virulence","year":2010,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Virulence; Biology; Rhodococcus equi; Complementation; Plasmid; Mutant; Gene; Microbiology; Virology; Mycobacterium tuberculosis; Genome; Genetics; Tuberculosis","score_opus":0.02994990314096469,"score_gpt":0.31874429975632773,"score_spread":0.28879439661536305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2093517402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960139,0.00026074983,0.000057132485,0.00077108346,0.0011195516,0.0007628394,0.00016791558,0.00007400435,0.000772815],"genre_scores_gemma":[0.9964976,0.00006597394,0.0004941138,0.0009000704,0.00022528101,0.0001501078,0.00010617871,0.000028043714,0.0015326508],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989317,0.00003773694,0.00025241837,0.00034527993,0.000032678472,0.00040017677],"domain_scores_gemma":[0.99901384,0.00014254203,0.00010979654,0.0004984977,0.00012027691,0.00011505245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016079024,0.00018635861,0.00023827353,0.000046316338,0.00031577828,0.00001971065,0.00007588735,0.00015057431,0.00016316658],"category_scores_gemma":[0.000090150344,0.00011827121,0.00018223093,0.00005950422,0.0002513184,0.00003556088,0.0000656163,0.00014997121,0.00010264752],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00059674616,0.00016984256,0.0007621213,0.00004361333,0.0001329267,0.0008405512,0.000047530906,6.323367e-8,0.99057084,0.00016891723,0.0023721624,0.004294661],"study_design_scores_gemma":[0.002882708,0.004073792,0.001756516,0.00004224795,0.00024888088,0.022188548,0.000046913152,0.00002577477,0.10843796,0.00027658895,0.8597158,0.00030423718],"about_ca_topic_score_codex":0.000024554805,"about_ca_topic_score_gemma":0.000005091697,"teacher_disagreement_score":0.8821329,"about_ca_system_score_codex":0.00003980614,"about_ca_system_score_gemma":0.000098760494,"threshold_uncertainty_score":0.482296},"labels":[],"label_agreement":null},{"id":"W2094828976","doi":"10.1016/j.vetimm.2004.12.006","title":"Assessment in mice of vapA–DNA vaccination against Rhodococcus equi infection","year":2005,"lang":"en","type":"article","venue":"Veterinary Immunology and Immunopathology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; DNA vaccination; Biology; Immune system; Virology; Plasmid; Immunization; Microbiology; Vaccination; Immunity; Antibody; Virulence; Immunology; Gene; Genetics","score_opus":0.016917250711580303,"score_gpt":0.3098453752677141,"score_spread":0.2929281245561338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094828976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925937,0.0020531698,0.000053226966,0.00018654868,0.00028789096,0.00036430202,0.000005729487,0.000045110686,0.0044103274],"genre_scores_gemma":[0.9974289,0.0018503339,0.00029893292,0.0001345046,0.00003473061,0.00007058071,0.000070977956,0.000016722584,0.0000943002],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99874985,0.00017902181,0.00046226554,0.00028516192,0.00006511358,0.00025858122],"domain_scores_gemma":[0.9993892,0.0000478217,0.00019746507,0.00024149472,0.00008946994,0.000034591198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025170512,0.00018270664,0.00041082603,0.0003530453,0.00008279048,0.000005655433,0.00003397024,0.00021434676,0.00009302249],"category_scores_gemma":[0.00004320962,0.00017135756,0.000075934724,0.00015177079,0.00011573055,0.00015538433,0.00008033893,0.00025604235,0.000011996595],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079195766,0.0015990065,0.22128901,0.00012766819,0.0002414108,0.001516271,0.0003398609,0.000012536646,0.67318153,0.00047238256,0.000009195156,0.10041916],"study_design_scores_gemma":[0.0030319726,0.0031806459,0.98060256,0.00006302027,0.000088020366,0.00637229,0.000052503663,0.000059927712,0.0051249717,0.00007996019,0.001212643,0.00013145876],"about_ca_topic_score_codex":0.000074342766,"about_ca_topic_score_gemma":0.000008632526,"teacher_disagreement_score":0.7593136,"about_ca_system_score_codex":0.00017286158,"about_ca_system_score_gemma":0.000096996584,"threshold_uncertainty_score":0.6987759},"labels":[],"label_agreement":null},{"id":"W2094833465","doi":"10.1016/s0008-4182(01)80022-3","title":"Xanthogranuloma of the corneoscleral limbus in an adult","year":2001,"lang":"en","type":"article","venue":"Canadian Journal of Ophthalmology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Ophthalmology; Medicine","score_opus":0.022762574200273007,"score_gpt":0.2844516895300945,"score_spread":0.2616891153298215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2094833465","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9869133,0.00025341593,6.1482103e-7,0.00020869641,0.00040046847,0.00011247083,0.0000087782055,0.000001026017,0.01210123],"genre_scores_gemma":[0.9995984,0.0000057413804,0.000029985427,0.00006407002,0.00007991237,0.0000014694784,0.0000029078853,0.000010502674,0.00020704279],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991874,0.00006801668,0.00034445897,0.00008304355,0.0000941001,0.00022297428],"domain_scores_gemma":[0.9988943,0.000018092169,0.0002047234,0.00018441075,0.00027592495,0.000422596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000113990274,0.00008492937,0.00026286516,0.00022606312,0.000046085606,0.0000058523738,0.00007447813,0.00007741403,0.00067988393],"category_scores_gemma":[0.00010595125,0.000056876794,0.00013080772,0.00019582806,0.00014285397,0.000051838302,0.0000044715116,0.0001644278,0.0000020316934],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007747239,0.00011630427,0.85975415,0.000008282328,0.00004200253,0.13936442,0.000098803044,0.000010301792,0.000056435492,0.000068439615,0.000036357487,0.0003670036],"study_design_scores_gemma":[0.00074491696,0.00052847475,0.61712337,0.000057017976,0.000046755646,0.38113904,0.000044828437,0.000006224946,0.000058164507,0.00014137167,0.000078347126,0.000031505464],"about_ca_topic_score_codex":0.005072404,"about_ca_topic_score_gemma":0.0016300187,"teacher_disagreement_score":0.24263081,"about_ca_system_score_codex":0.00012220231,"about_ca_system_score_gemma":0.0011206544,"threshold_uncertainty_score":0.7667992},"labels":[],"label_agreement":null},{"id":"W2096413260","doi":"10.1259/bjr/84768811","title":"<i>Rhodococcus equi</i>pneumonia in AIDS: high-resolution CT findings in five patients","year":2005,"lang":"en","type":"article","venue":"British Journal of Radiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Rhodococcus equi; Medicine; Pleural effusion; High resolution; Pneumonia; Radiology; Lung; Computed tomographic; Nuclear medicine; Computed tomography; Pathology; Internal medicine","score_opus":0.006783230568442204,"score_gpt":0.244549499474277,"score_spread":0.2377662689058348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2096413260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99687517,0.0020107115,0.00001106017,0.0001545887,0.00029469054,0.00021432068,0.000014344978,0.000008367657,0.00041677617],"genre_scores_gemma":[0.9983595,0.00076389295,0.00023792882,0.00031387244,0.00020097259,0.0000074657387,0.000025716616,0.000015180422,0.00007544022],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985713,0.000114943665,0.00066256995,0.00017044865,0.00016840224,0.00031233917],"domain_scores_gemma":[0.99933684,0.000055868048,0.00024940434,0.000083753715,0.00013371634,0.00014038928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031521477,0.00011983033,0.00048236133,0.00030985448,0.000039390517,0.000014288631,0.000050604114,0.00007930862,0.00008744743],"category_scores_gemma":[0.00025073913,0.0001230687,0.00012516431,0.00016535161,0.000060951577,0.00015866717,0.000019106663,0.00032947806,0.000011237113],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024953537,0.0010609267,0.94009936,0.000021922884,0.000101316444,0.025920654,0.000088155626,0.000261201,0.00016837312,0.000032063544,0.0022443319,0.029752163],"study_design_scores_gemma":[0.0070774397,0.0009106868,0.9149601,0.00034862594,0.0000729416,0.075299546,0.000021061673,0.000033294364,0.00007274835,0.00012232711,0.000981272,0.00009995267],"about_ca_topic_score_codex":0.0006131955,"about_ca_topic_score_gemma":0.00024791042,"teacher_disagreement_score":0.04937889,"about_ca_system_score_codex":0.0005022206,"about_ca_system_score_gemma":0.00013866494,"threshold_uncertainty_score":0.5018596},"labels":[],"label_agreement":null},{"id":"W2098043132","doi":"10.1128/cdli.10.3.345-351.2003","title":"Immunoglobulin G Subisotype Responses of Pneumonic and Healthy, Exposed Foals and Adult Horses to<i>Rhodococcus equi</i>Virulence-Associated Proteins","year":2003,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":60,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; Biology; Immune system; Antibody; Immunology; Isotype; Virulence; Pneumonia; Immunoglobulin G; Immunity; Virology; Microbiology; Medicine; Monoclonal antibody; Genetics; Gene; Internal medicine","score_opus":0.03857782228504973,"score_gpt":0.35279050799421696,"score_spread":0.3142126857091672,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2098043132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99061567,0.0069301976,0.000008449664,0.0010876019,0.00017386119,0.0009302383,0.000025212767,0.000047879123,0.00018089837],"genre_scores_gemma":[0.9917526,0.0070865573,0.00012465935,0.00067147997,0.000028511897,0.000056358404,0.000016125245,0.000022222875,0.00024148365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9977573,0.00038141917,0.0009192592,0.000478423,0.000099670164,0.00036390004],"domain_scores_gemma":[0.998385,0.0004790311,0.00029126325,0.00032772592,0.0002648693,0.00025208024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056795176,0.00024133037,0.0008752957,0.00012534858,0.00014184804,0.000014992521,0.000040279927,0.0002338935,0.000050645423],"category_scores_gemma":[0.0026687484,0.000185008,0.000101791426,0.00015911498,0.00019490592,0.00005369408,0.00008873169,0.00025670812,0.0000084412695],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0048978105,0.0013388639,0.97281206,0.0001103239,0.00066177995,0.00027985458,0.00010331946,9.072423e-8,0.00573562,0.00061827723,0.00008986957,0.013352157],"study_design_scores_gemma":[0.007484606,0.008692259,0.97919965,0.00015602412,0.0002888089,0.000603911,0.00009042162,0.0000031712684,0.0017958733,0.0005553238,0.00094576244,0.00018420807],"about_ca_topic_score_codex":0.0001702284,"about_ca_topic_score_gemma":0.00004158468,"teacher_disagreement_score":0.013167948,"about_ca_system_score_codex":0.000029388608,"about_ca_system_score_gemma":0.00022186183,"threshold_uncertainty_score":0.7544407},"labels":[],"label_agreement":null},{"id":"W2107231182","doi":"10.1128/cvi.00448-06","title":"In Vivo Expression of and Cell-Mediated Immune Responses to the Plasmid-Encoded Virulence-Associated Proteins of<i>Rhodococcus equi</i>in Foals","year":2007,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Morris Animal Foundation","keywords":"Rhodococcus equi; Biology; Virulence; Cytokine; Immunology; Immune system; Pneumonia; Interferon gamma; Interleukin 10; Microbiology; Virology; Gene; Medicine","score_opus":0.026142138646604664,"score_gpt":0.3473540769059835,"score_spread":0.3212119382593789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107231182","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964072,0.0017684695,0.000013789074,0.0006108828,0.00012857432,0.0008246866,0.000021383372,0.000013151598,0.00021182862],"genre_scores_gemma":[0.9985555,0.0009355924,0.000057167446,0.00019055422,0.000024214422,0.00003419186,0.000007591162,0.000011704339,0.00018351665],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979678,0.00023755024,0.0011378512,0.00028131326,0.000101414305,0.00027409833],"domain_scores_gemma":[0.9980005,0.0012128619,0.00032212332,0.00026932138,0.00010498279,0.00009022073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013520822,0.00015296973,0.0006884438,0.00020083948,0.000041535346,0.0000034842362,0.000059923543,0.00020433408,0.00005283066],"category_scores_gemma":[0.0016919312,0.00009627204,0.000086494765,0.0002812131,0.000121032026,0.000042616928,0.00012210483,0.00025515142,0.0000026622506],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00741583,0.0020008797,0.77169365,0.00006973384,0.00010885452,0.00042777383,0.0002990718,0.0000014117924,0.21561983,0.000021996413,0.00010635428,0.0022346056],"study_design_scores_gemma":[0.0071643125,0.0019930867,0.9001855,0.00030058256,0.0000698405,0.000051418192,0.00014129856,0.000016487435,0.08946741,0.00010871277,0.0004047022,0.000096626514],"about_ca_topic_score_codex":0.00038194613,"about_ca_topic_score_gemma":0.00013053026,"teacher_disagreement_score":0.12849186,"about_ca_system_score_codex":0.000026274129,"about_ca_system_score_gemma":0.000098953176,"threshold_uncertainty_score":0.39258596},"labels":[],"label_agreement":null},{"id":"W2111022993","doi":"10.1128/jcm.02284-14","title":"Diagnosing Rhodococcus equi Infections in a Setting Where Tuberculosis Is Highly Endemic: a Double Challenge","year":2015,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Wellcome Trust","keywords":"Rhodococcus equi; Tuberculosis; Incidence (geometry); Human immunodeficiency virus (HIV); Virology; AIDS-Related Opportunistic Infections; Medicine; Biology; Immunology; Microbiology; Viral disease; Sida; Pathology","score_opus":0.09160710427206901,"score_gpt":0.4150933832884373,"score_spread":0.3234862790163683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111022993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9895118,0.0026292503,0.00003393589,0.0038953172,0.001177838,0.00025304325,0.000011447387,0.000020587237,0.0024667783],"genre_scores_gemma":[0.9968914,0.0011123494,0.0002590141,0.000940144,0.0006848365,0.000008893264,0.000008814172,0.00002143605,0.00007312008],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99740237,0.00022298346,0.0017096909,0.00025119158,0.00008559861,0.0003281759],"domain_scores_gemma":[0.99764013,0.00052035373,0.0008203293,0.00020455015,0.00042865542,0.00038599464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014991828,0.00018402036,0.0009267806,0.00023066146,0.000048785256,0.00001601364,0.00006312027,0.0003500298,0.00010941053],"category_scores_gemma":[0.00080972025,0.00013479457,0.00048021475,0.00016673583,0.00011340068,0.00011742226,0.000060236627,0.00073020294,0.000040002775],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006984959,0.0028392505,0.98182964,0.000054645698,0.000605025,0.0017155688,0.00031502344,0.000015671087,0.0008155656,0.000036992857,0.0052831573,0.005790939],"study_design_scores_gemma":[0.15795337,0.033041827,0.29347497,0.0054330807,0.005515161,0.10786804,0.0017809845,0.00013859266,0.0022659914,0.0071240338,0.38352734,0.0018766058],"about_ca_topic_score_codex":0.00013941873,"about_ca_topic_score_gemma":0.00008057783,"teacher_disagreement_score":0.6883547,"about_ca_system_score_codex":0.00021991873,"about_ca_system_score_gemma":0.00063685747,"threshold_uncertainty_score":0.5496763},"labels":[],"label_agreement":null},{"id":"W2111698215","doi":"10.1128/iai.00856-09","title":"<i>Rhodococcus equi</i>Virulence-Associated Protein A Is Required for Diversion of Phagosome Biogenesis but Not for Cytotoxicity","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Virulence; Biology; Rhodococcus equi; Phagosome; Cytotoxicity; Microbiology; Biogenesis; Phagocytosis; Biochemistry; Gene","score_opus":0.03711406919320507,"score_gpt":0.3038787463108166,"score_spread":0.26676467711761154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2111698215","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99647343,0.00008463738,0.0006365876,0.0001376144,0.000086953325,0.001909824,0.00027232614,0.00007800816,0.000320645],"genre_scores_gemma":[0.99891275,0.00010010278,0.00007862535,0.00034626698,0.000035173114,0.00012388223,0.00011473738,0.000011757945,0.00027673095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991284,0.000046907084,0.0002925884,0.00019872308,0.00012984857,0.00020354614],"domain_scores_gemma":[0.9990571,0.00005539906,0.00023593387,0.00020007482,0.00034536776,0.00010613852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025413086,0.00016024789,0.00032767787,0.00012911153,0.0003328356,0.000016909175,0.000023328905,0.000130906,0.00003308994],"category_scores_gemma":[0.00025563626,0.00013887494,0.00023473336,0.00015893372,0.00005961413,0.00012906732,0.000019910949,0.0000668811,0.0000019060952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003022319,0.0033940847,0.061517805,0.00048805616,0.00065563404,0.000018263781,0.00035625952,0.0000023361251,0.9092423,0.0002130552,0.00043115797,0.020658746],"study_design_scores_gemma":[0.006809137,0.003903298,0.29193467,0.00022625693,0.0005427489,0.000042732656,0.000037187223,0.00021323083,0.69467545,0.00072948204,0.00066621235,0.00021963743],"about_ca_topic_score_codex":0.00094130513,"about_ca_topic_score_gemma":0.00001030409,"teacher_disagreement_score":0.23041685,"about_ca_system_score_codex":0.00013008653,"about_ca_system_score_gemma":0.00008185426,"threshold_uncertainty_score":0.5663156},"labels":[],"label_agreement":null},{"id":"W2115495414","doi":"10.1016/j.vetmic.2014.03.026","title":"Mouse lung infection model to assess Rhodococcus equi virulence and vaccine protection","year":2014,"lang":"en","type":"article","venue":"Veterinary Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Fogarty International Center; Horserace Betting Levy Board","keywords":"Rhodococcus equi; Virulence; Biology; Microbiology; Virology; Plasmid; Pathogen; Spleen; Nasal administration; In vivo; Vaccination; Lung; Infectious dose; Immunology; Virus; Gene; Medicine","score_opus":0.05572336025655363,"score_gpt":0.32074198367537804,"score_spread":0.26501862341882443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2115495414","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9815631,0.000048983715,0.016864523,0.000117217685,0.00016689212,0.00072505086,0.000014341167,0.00012445719,0.00037543345],"genre_scores_gemma":[0.9985172,0.000038274153,0.00046563827,0.0003782534,0.00008080993,0.00013539998,0.00004955084,0.000023251312,0.00031158363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907535,0.00007507195,0.00020434368,0.00037106863,0.000032167933,0.00024198634],"domain_scores_gemma":[0.99945724,0.000016206437,0.00007470036,0.0002345253,0.00007923428,0.00013811309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014242396,0.00017799862,0.00025926332,0.00014882257,0.000116096955,0.000015094402,0.000022068853,0.00012222183,0.000033608187],"category_scores_gemma":[0.000048872054,0.00014993377,0.00005497784,0.00009267122,0.000026682734,0.00007306383,0.000076853576,0.00008686487,0.00003003192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003820108,0.00019711335,0.007150811,0.00013401089,0.00007347632,0.00009287081,0.000039633203,0.00014593886,0.9879933,0.00004320242,0.00014782201,0.0035997906],"study_design_scores_gemma":[0.022443052,0.054151367,0.14198093,0.0010993603,0.0020419806,0.116501704,0.000050175844,0.08306142,0.49943393,0.00087213784,0.07495202,0.003411918],"about_ca_topic_score_codex":0.00011860196,"about_ca_topic_score_gemma":0.000007099822,"teacher_disagreement_score":0.4885594,"about_ca_system_score_codex":0.00011328847,"about_ca_system_score_gemma":0.000034643894,"threshold_uncertainty_score":0.61141217},"labels":[],"label_agreement":null},{"id":"W2121526389","doi":"10.1046/j.1365-2958.2003.03689.x","title":"Deletion of <i>vapA</i> encoding Virulence Associated Protein A attenuates the intracellular actinomycete <i>Rhodococcus equi</i>","year":2003,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":146,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; University of Guelph","keywords":"Rhodococcus equi; Biology; Virulence; Intracellular; Microbiology; Rhodococcus; Pathogen; Bacteria; Gene; Genetics","score_opus":0.009084803420949803,"score_gpt":0.23286111636965326,"score_spread":0.22377631294870345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121526389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939406,0.0011520197,0.00067752507,0.00017035696,0.000100065176,0.00085804035,0.000020535324,0.00004303247,0.0030378283],"genre_scores_gemma":[0.9989826,0.0000272135,0.00019732567,0.0004785622,0.000013678118,0.00007014845,0.00009082377,0.000024416802,0.000115232964],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986412,0.00028164432,0.00035382528,0.00030539025,0.00007843842,0.00033949016],"domain_scores_gemma":[0.99908066,0.000048112113,0.0002871242,0.00033807117,0.00017753053,0.00006851726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036069192,0.00019823671,0.0003365453,0.00006403761,0.000108932596,0.000010743861,0.00006373368,0.0001550617,0.0000765928],"category_scores_gemma":[0.0003118012,0.00013878576,0.00018885006,0.0001942419,0.0001621685,0.000027318194,0.000031833515,0.00018606341,0.000024688754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041928673,0.00025366098,0.0039405483,0.00003488659,0.00027349545,0.00058715104,0.000052117037,0.0000076300785,0.99386215,0.000535396,0.0000529595,0.0003580987],"study_design_scores_gemma":[0.0011130818,0.00030790074,0.00021166258,0.00010164786,0.00028012317,0.0011199825,0.000029597866,0.000008519891,0.9909085,0.00018417952,0.0055915047,0.00014330886],"about_ca_topic_score_codex":0.000051225372,"about_ca_topic_score_gemma":0.000003079015,"teacher_disagreement_score":0.0055385455,"about_ca_system_score_codex":0.00010748215,"about_ca_system_score_gemma":0.00013139074,"threshold_uncertainty_score":0.5659519},"labels":[],"label_agreement":null},{"id":"W2122558968","doi":"10.1259/bjr/31723131","title":"Renal replacement lipomatosis associated with renal transplantation","year":2005,"lang":"en","type":"article","venue":"British Journal of Radiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver Hospital and Health Sciences Centre","funders":"","keywords":"Lipomatosis; Medicine; Renal transplant; Transplantation; Cadaveric spasm; Chronic renal failure; Urology; Renal replacement therapy; Surgery; Radiology","score_opus":0.007917883020373674,"score_gpt":0.23829406298805308,"score_spread":0.23037617996767942,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2122558968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959995,0.001414855,0.00042671213,0.0002742878,0.000079777965,0.00012797436,0.00001518258,0.000017569835,0.0016440977],"genre_scores_gemma":[0.9975095,0.0011478384,0.00050175027,0.00023913576,0.0002661435,0.0000047086764,0.000054591135,0.000013742423,0.00026260843],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9990204,0.000077186436,0.00040688686,0.0001175029,0.00020203716,0.000176009],"domain_scores_gemma":[0.99918,0.000041365598,0.00035263546,0.00006567036,0.00021020159,0.00015010404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025729465,0.000091870184,0.00032142038,0.00009126251,0.00007621227,0.000015512525,0.000025687443,0.00007621553,0.0002163788],"category_scores_gemma":[0.00006671515,0.00007890701,0.00011845178,0.000075781885,0.000054214463,0.00008605105,0.000002688077,0.00017041665,0.0000033900944],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0121388985,0.005705675,0.51981586,0.00017076185,0.011130886,0.24971414,0.00085982546,0.0014852225,0.0051258225,0.00015412382,0.06786228,0.12583652],"study_design_scores_gemma":[0.007996425,0.002271539,0.23001827,0.00064025726,0.0009251665,0.7554463,0.000016117232,0.000042512303,0.000820767,0.000021391623,0.0016940607,0.000107142354],"about_ca_topic_score_codex":0.000024222702,"about_ca_topic_score_gemma":0.00006792968,"teacher_disagreement_score":0.5057322,"about_ca_system_score_codex":0.00017632399,"about_ca_system_score_gemma":0.00017142431,"threshold_uncertainty_score":0.32177347},"labels":[],"label_agreement":null},{"id":"W2125735798","doi":"10.1556/004.2015.024","title":"Three new serotypes of Rhodococcus equi in Prescott’s serotyping system — Short communication","year":2015,"lang":"en","type":"article","venue":"Acta Veterinaria Hungarica","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ontario Veterinary College, University of Guelph; Hungarian Scientific Research Fund; Justus Liebig Universität Gießen","keywords":"Serotype; Rhodococcus equi; Biology; Rhodococcus; Virology; Microbiology; Bacteria; Genetics; Virulence","score_opus":0.08249383360611595,"score_gpt":0.31987119429331184,"score_spread":0.2373773606871959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2125735798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98065966,0.0006195002,0.00033636516,0.0002176779,0.00017527842,0.0009201302,0.000005690364,0.00011427734,0.01695141],"genre_scores_gemma":[0.9985619,0.000023671471,0.0010921174,0.00003948885,0.000055193566,0.000053303753,0.00004480105,0.00002926249,0.000100217214],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99875146,0.00006353202,0.00044371557,0.00024742674,0.00025507805,0.0002387973],"domain_scores_gemma":[0.99865603,0.00004702928,0.00014927363,0.0007575035,0.00014845237,0.00024171679],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027363416,0.00018017387,0.0004125254,0.00013612436,0.00005028329,0.000023366134,0.00011472104,0.00011486582,0.000025772315],"category_scores_gemma":[0.000093251496,0.0001587404,0.000089464615,0.00020401947,0.000041238363,0.00014184786,0.00013452474,0.00015608479,0.000013593073],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030177087,0.001916507,0.95217514,0.0013082827,0.0010903197,0.0021271978,0.0027956835,0.00010405191,0.009269844,0.0022555336,0.0040444946,0.019895226],"study_design_scores_gemma":[0.010529416,0.0049209427,0.9463463,0.0033990631,0.0013895001,0.0042892057,0.0012287574,0.0037310445,0.0030644282,0.0009368252,0.019157303,0.0010072091],"about_ca_topic_score_codex":0.0023592885,"about_ca_topic_score_gemma":0.00013482734,"teacher_disagreement_score":0.018888017,"about_ca_system_score_codex":0.00033194147,"about_ca_system_score_gemma":0.00035225932,"threshold_uncertainty_score":0.64732456},"labels":[],"label_agreement":null},{"id":"W2129627219","doi":"10.1128/iai.68.12.6840-6847.2000","title":"DNA Sequence and Comparison of Virulence Plasmids from <i>Rhodococcus equi</i> ATCC 33701 and 103","year":2000,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":177,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Washington State University; Grayson-Jockey Club Research Foundation","keywords":"Biology; ORFS; Plasmid; Virulence; Genetics; Rhodococcus equi; Gene; Pathogenicity island; Homology (biology); Open reading frame; Gene cluster; Peptide sequence","score_opus":0.03488796415828281,"score_gpt":0.32636210664179877,"score_spread":0.29147414248351594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2129627219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994377,0.000777559,0.000015738005,0.00003465072,0.00006697136,0.00019545454,0.000031138996,0.00004633353,0.0044551496],"genre_scores_gemma":[0.99814117,0.001524803,0.000035368404,0.00012252144,0.000024254543,0.000009105081,0.00003459086,0.000008521166,0.000099654004],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99930954,0.000060381968,0.00023109379,0.00017686498,0.00010151975,0.00012061784],"domain_scores_gemma":[0.9994833,0.00006641249,0.0000860181,0.00017752724,0.000057363806,0.00012937399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000094674964,0.00013360528,0.0002768758,0.000052168263,0.00018090085,0.000025168123,0.000012740106,0.00007678433,0.00031239542],"category_scores_gemma":[0.00003387275,0.00011416241,0.000036450096,0.00008687404,0.00020502952,0.00012864494,0.000027433472,0.00014931266,0.0000066871007],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017810726,0.0003942856,0.9216319,0.000080629936,0.000116735406,0.000027221171,0.00037032127,0.000002637577,0.010156482,0.00003139789,0.000055120352,0.0669552],"study_design_scores_gemma":[0.0019771247,0.0005661251,0.97708297,0.0001748668,0.00025790944,0.0003088694,0.000073136034,0.00036556827,0.01487875,0.00029147216,0.0038646548,0.00015854811],"about_ca_topic_score_codex":0.0058230264,"about_ca_topic_score_gemma":0.000068805646,"teacher_disagreement_score":0.06679665,"about_ca_system_score_codex":0.000030949657,"about_ca_system_score_gemma":0.000035274916,"threshold_uncertainty_score":0.8802713},"labels":[],"label_agreement":null},{"id":"W2138274790","doi":"10.1128/jb.01570-07","title":"The Intracellular Pathogen <i>Rhodococcus equi</i> Produces a Catecholate Siderophore Required for Saprophytic Growth","year":2007,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Enterprise Ireland","keywords":"Siderophore; Mutant; Intracellular; Biology; Pathogen; Wild type; Biochemistry; Microbiology; Gene","score_opus":0.017362065395201517,"score_gpt":0.28201350964825683,"score_spread":0.2646514442530553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138274790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952376,0.0017780378,0.000463498,0.00090131036,0.00080582255,0.0005663616,0.00000762968,0.000015783073,0.00022395285],"genre_scores_gemma":[0.99803656,0.0003098749,0.0004763053,0.00025623644,0.0007281622,0.000015006189,0.00001051482,0.000026941589,0.00014039117],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849886,0.000055696524,0.00074218697,0.0001779322,0.00014800997,0.0003772937],"domain_scores_gemma":[0.99811924,0.00019034222,0.0006782276,0.00022586291,0.0005984909,0.00018782906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010979524,0.00016648584,0.00042896456,0.00010724733,0.00019821481,0.000029956947,0.00007936645,0.000116716976,0.0000127863605],"category_scores_gemma":[0.0005106417,0.00009212502,0.00026799063,0.00010162013,0.00012571992,0.00008138318,0.000024573597,0.00020909643,0.0000054329516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0047185747,0.0005623614,0.023128267,0.00019465933,0.001105698,0.008101535,0.0003121528,0.000002233305,0.9321234,0.00024520038,0.00048638188,0.02901951],"study_design_scores_gemma":[0.023922363,0.029314991,0.31108063,0.0008532641,0.005474184,0.10353856,0.000863224,0.00006314907,0.36740303,0.020818269,0.1353817,0.0012866283],"about_ca_topic_score_codex":0.000010168501,"about_ca_topic_score_gemma":0.0000039215574,"teacher_disagreement_score":0.5647204,"about_ca_system_score_codex":0.00014555645,"about_ca_system_score_gemma":0.0002652642,"threshold_uncertainty_score":0.37567493},"labels":[],"label_agreement":null},{"id":"W2138942202","doi":"10.1128/cdli.10.2.241-245.2003","title":"Performance of Five Serological Assays for Diagnosis of<i>Rhodococcus equi</i>Pneumonia in Foals","year":2003,"lang":"en","type":"article","venue":"Clinical and Vaccine Immunology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Morris Animal Foundation","keywords":"Rhodococcus equi; Serology; Ouchterlony double immunodiffusion; Pneumonia; Immunodiffusion; Antibody; Medicine; Immunology; Microbiology; Virology; Biology; Internal medicine; Virulence","score_opus":0.04112210756590732,"score_gpt":0.35647279599720405,"score_spread":0.3153506884312967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2138942202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970826,0.0014736453,0.00000617694,0.00020589805,0.00016621345,0.00047772515,0.000012089955,0.000011364471,0.0005642813],"genre_scores_gemma":[0.9964275,0.0030480137,0.00014510463,0.0001391798,0.000027140904,0.00010875039,0.000012249116,0.000009063953,0.000083014085],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985989,0.00010217595,0.0007873818,0.0002504375,0.000050135375,0.00021099723],"domain_scores_gemma":[0.9986879,0.0006905639,0.00022157068,0.00020549014,0.00012905781,0.00006539262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045307344,0.00012667754,0.00072978024,0.00007395165,0.00002909715,0.0000016810827,0.000034080276,0.00018076786,0.000065009976],"category_scores_gemma":[0.0009253404,0.00008902382,0.00016892227,0.000098291384,0.00010894137,0.000030206613,0.000033916443,0.00014826804,0.0000024496646],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008721122,0.001167043,0.98757666,0.00010104352,0.00021345788,0.0000476518,0.00001515841,0.0000022420038,0.00024160395,0.00026967603,0.000049235536,0.009444123],"study_design_scores_gemma":[0.006095773,0.0044924123,0.98541385,0.00007926513,0.00020904624,0.00013416805,0.000016354576,0.00006973896,0.0018623093,0.00039937015,0.0011475247,0.00008017339],"about_ca_topic_score_codex":0.00002623893,"about_ca_topic_score_gemma":0.000005744857,"teacher_disagreement_score":0.00936395,"about_ca_system_score_codex":0.000010952487,"about_ca_system_score_gemma":0.00007063616,"threshold_uncertainty_score":0.36302862},"labels":[],"label_agreement":null},{"id":"W2144379375","doi":"10.1128/iai.73.10.6736-6741.2005","title":"Isocitrate Lyase Activity Is Required for Virulence of the Intracellular Pathogen <i>Rhodococcus equi</i>","year":2005,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Health Research Board","keywords":"Rhodococcus equi; Virulence; Biology; Isocitrate lyase; Microbiology; Pathogen; Intracellular; Human pathogen; Rhodococcus; Virology; Bacteria; Biochemistry; Enzyme; Genetics; Gene; Glyoxylate cycle","score_opus":0.023856054230423102,"score_gpt":0.2912029824944653,"score_spread":0.2673469282640422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2144379375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99658054,0.00022875749,0.00044928593,0.00028323906,0.00014597608,0.0006212238,0.000053541404,0.00003752507,0.0015998994],"genre_scores_gemma":[0.9989047,0.00022020405,0.00004879459,0.00038812307,0.00006859074,0.00004518976,0.000010383943,0.000011694468,0.0003023076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993381,0.00007234875,0.00019225093,0.00014348158,0.000107671374,0.00014615578],"domain_scores_gemma":[0.99926025,0.000045417353,0.00016576963,0.00030806562,0.00014419064,0.00007628121],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023361754,0.00012233964,0.00019354007,0.000039381524,0.00026811776,0.000015606982,0.000024958092,0.00007982353,0.00007160507],"category_scores_gemma":[0.000091791844,0.00008546323,0.00017012085,0.0001210801,0.00010791963,0.0001321049,0.00003566122,0.00012877259,0.0000044297276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00082025805,0.00303383,0.21891606,0.0005152614,0.0006072409,0.000022617278,0.0010304693,0.000019521856,0.6107423,0.0003366941,0.0007232792,0.1632325],"study_design_scores_gemma":[0.004356054,0.0008184516,0.39996585,0.00017232333,0.0007370621,0.00034787602,0.00005205174,0.0008959574,0.5605728,0.0005104084,0.031290587,0.00028058037],"about_ca_topic_score_codex":0.00050554844,"about_ca_topic_score_gemma":0.000026274967,"teacher_disagreement_score":0.18104981,"about_ca_system_score_codex":0.00007730328,"about_ca_system_score_gemma":0.000090075824,"threshold_uncertainty_score":0.34850892},"labels":[],"label_agreement":null},{"id":"W2148095480","doi":"10.14740/wjnu145w","title":"Emphysematous Pyelonephritis Treated With Percutaneous Nephrolithotomy","year":2014,"lang":"en","type":"article","venue":"World Journal of Nephrology and Urology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Percutaneous nephrolithotomy; Nephrectomy; Percutaneous; Surgery; Sepsis; Percutaneous nephrostomy; Renal function; Nephrostomy; Complication; Antibiotics; Abscess; Kidney disease; Drainage; Kidney; Internal medicine","score_opus":0.005420350485240081,"score_gpt":0.2288938679118928,"score_spread":0.22347351742665272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2148095480","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99334884,0.00095708144,0.00012182531,0.0015797958,0.00007750192,0.00016461195,0.0000020895015,0.000030240566,0.0037180246],"genre_scores_gemma":[0.9924521,0.00017965333,0.00035101236,0.0063881557,0.00025782702,0.0000049148243,0.0000054421635,0.000025023694,0.00033591202],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9987933,0.00014169984,0.00039831334,0.00020919496,0.00013848553,0.00031898834],"domain_scores_gemma":[0.99889004,0.00013892606,0.00030731538,0.00018306228,0.00020677563,0.00027387042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017688832,0.00020959302,0.0006406577,0.00034702456,0.00012178649,0.000011976557,0.00004258527,0.00013300666,0.00019395021],"category_scores_gemma":[0.000030028017,0.00014183157,0.000114236616,0.00015604144,0.00031241545,0.00006302978,0.000018747103,0.0003291993,0.000009302772],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013481061,0.0015799118,0.83801085,0.00013656581,0.00345926,0.09375091,0.00039804724,0.00004715044,0.0050608316,0.003466778,0.0039793397,0.036629282],"study_design_scores_gemma":[0.00512742,0.007940489,0.30903715,0.00003534172,0.0016269712,0.5488834,0.000013939272,0.00011600895,0.00008067379,0.0009803877,0.1259601,0.00019812542],"about_ca_topic_score_codex":0.000031060074,"about_ca_topic_score_gemma":0.000059850365,"teacher_disagreement_score":0.5289737,"about_ca_system_score_codex":0.000028389619,"about_ca_system_score_gemma":0.000095060204,"threshold_uncertainty_score":0.5783723},"labels":[],"label_agreement":null},{"id":"W2149408813","doi":"10.5489/cuaj.1555","title":"Case of emphysematous pyelonephritis in kidney allograft: Conservative treatment","year":2014,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Antibiotics; Percutaneous; Abdominal pain; Nausea; Diabetes mellitus; Urinary system; Surgery; Kidney disease; Kidney; Adipose capsule of kidney; Gastroenterology; Internal medicine","score_opus":0.011871100577960243,"score_gpt":0.24232020246730876,"score_spread":0.23044910188934853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2149408813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99274117,0.00007609649,0.000012330246,0.003164441,0.00011667927,0.00020424683,0.000052800715,0.00001206725,0.0036201426],"genre_scores_gemma":[0.99734825,0.000049502738,0.00008037378,0.0021911797,0.00010467146,0.000014102496,0.000027593136,0.000008766659,0.00017558005],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988733,0.00015820528,0.00036501078,0.00014280649,0.00014425747,0.00031644703],"domain_scores_gemma":[0.9984641,0.000111477624,0.00026638393,0.000089642715,0.00022206292,0.00084635353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029897297,0.00012530394,0.00035293683,0.0002006859,0.00011811455,0.000021817083,0.000021838174,0.00015435825,0.00029063094],"category_scores_gemma":[0.0007580638,0.00009541141,0.00015223998,0.00016401579,0.00003350455,0.000045614313,0.0000041708217,0.0001721067,0.000011403746],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003499087,0.00024273987,0.9744112,0.0000069734515,0.00021164185,0.020104703,0.00017385485,0.000008769598,0.00002053806,0.00028178003,0.00078082696,0.0037219706],"study_design_scores_gemma":[0.0051926216,0.0017583779,0.92241853,0.00006374535,0.0002910503,0.044312555,0.00007339282,0.00022188804,0.00007483526,0.0012915116,0.024121732,0.00017973711],"about_ca_topic_score_codex":0.01131186,"about_ca_topic_score_gemma":0.0049287216,"teacher_disagreement_score":0.05199266,"about_ca_system_score_codex":0.001349536,"about_ca_system_score_gemma":0.00072195113,"threshold_uncertainty_score":0.9952719},"labels":[],"label_agreement":null},{"id":"W2152042796","doi":"10.1128/iai.69.2.650-656.2001","title":"Virulence Plasmid of<i>Rhodococcus equi</i>Contains Inducible Gene Family Encoding Secreted Proteins","year":2001,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":97,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada","keywords":"Rhodococcus equi; Virulence; Biology; Plasmid; Gene; Microbiology; Virology; Pathogen; Genetics","score_opus":0.035964482174029644,"score_gpt":0.29261224372358163,"score_spread":0.256647761549552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152042796","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816812,0.00027443908,0.0006710856,0.00002230318,0.00017770813,0.00054053025,0.00000999928,0.00010504374,0.01651769],"genre_scores_gemma":[0.99856347,0.0008721238,0.000068173846,0.00017341255,0.00005405583,0.00004728503,0.0000359822,0.000015748146,0.00016973619],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990767,0.000072353156,0.00029230068,0.0001970469,0.00015647819,0.00020508308],"domain_scores_gemma":[0.99919665,0.000034062265,0.00015433665,0.0002931643,0.0001762068,0.00014556074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022053077,0.00016274616,0.00027172634,0.00017211915,0.00024549855,0.000023030947,0.000023183446,0.00010452558,0.000111160036],"category_scores_gemma":[0.00011123186,0.0001411665,0.000099936486,0.00028435775,0.00008759545,0.00016287177,0.00004502715,0.00021881006,0.000011889719],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030875686,0.0008920308,0.72006273,0.00014546629,0.00029616622,0.0002690972,0.00031150097,0.000012936194,0.26575768,0.00016725177,0.000039843224,0.011736549],"study_design_scores_gemma":[0.0029748594,0.0011731299,0.87047404,0.00023126429,0.00026271262,0.0013082093,0.000119902,0.00015421411,0.116736464,0.00018809985,0.006125493,0.0002516335],"about_ca_topic_score_codex":0.003772383,"about_ca_topic_score_gemma":0.00004621934,"teacher_disagreement_score":0.1504113,"about_ca_system_score_codex":0.00010570657,"about_ca_system_score_gemma":0.00013372098,"threshold_uncertainty_score":0.5756602},"labels":[],"label_agreement":null},{"id":"W2154646993","doi":"10.5354/acv.v11i2.4775","title":"Función protectora en el modelo murino de la inmunoglobulina G equina antilipoproteína de 17 kDa de rhodhococcus equi","year":2010,"lang":"es","type":"article","venue":"Avances en Ciencias Veterinarias","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Foal; Enteritis; Rhodococcus equi; Humanities; Medicine; Biology; Microbiology; Art","score_opus":0.012640461154151628,"score_gpt":0.33505397823359206,"score_spread":0.32241351707944044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154646993","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9763392,0.0013134093,0.002132084,0.00015656618,0.0010469084,0.0019707987,0.0001052361,0.00033663723,0.016599145],"genre_scores_gemma":[0.9919364,0.00068404037,0.0040562963,0.00032453059,0.0014955592,0.0006263164,0.000029124953,0.00014031697,0.0007074402],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.994638,0.0006228506,0.0008557785,0.0011670323,0.0008152446,0.0019010709],"domain_scores_gemma":[0.99658275,0.00045677452,0.0005389481,0.0012401816,0.0002784564,0.0009028749],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025100312,0.0008795621,0.0009088664,0.00030218475,0.00060942885,0.0003385649,0.0005328226,0.00085060956,0.0005934052],"category_scores_gemma":[0.0012409737,0.0008026112,0.00044641588,0.0004747368,0.00062789844,0.0005076687,0.0004195096,0.0013839564,0.00012130092],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003078162,0.006811036,0.34875354,0.0032802452,0.001748288,0.050762147,0.013227873,0.0012613189,0.46076328,0.0047838734,0.00080226583,0.10472795],"study_design_scores_gemma":[0.012696183,0.012027278,0.790228,0.0032580083,0.0030350476,0.03727482,0.0015890133,0.016407337,0.041192263,0.009184601,0.06918536,0.0039220676],"about_ca_topic_score_codex":0.0025932114,"about_ca_topic_score_gemma":0.00006793249,"teacher_disagreement_score":0.44147447,"about_ca_system_score_codex":0.0012700036,"about_ca_system_score_gemma":0.0028145101,"threshold_uncertainty_score":0.99944246},"labels":[],"label_agreement":null},{"id":"W2155859838","doi":"10.1128/aac.44.5.1367-1369.2000","title":"MICs of Oxazolidinones for <i>Rhodococcus equi</i> Strains Isolated from Humans and Animals","year":2000,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Linezolid; Rhodococcus equi; Microbiology; Antibiotics; Antimicrobial; Biology; Bacteria; Staphylococcus aureus; Vancomycin; Virulence","score_opus":0.01687263912899273,"score_gpt":0.2790969242680678,"score_spread":0.2622242851390751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2155859838","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99795526,0.00012823714,0.000037797676,0.00036955831,0.000037759048,0.00050884037,0.0002574478,0.000027359078,0.00067774084],"genre_scores_gemma":[0.99425566,0.00247933,0.00027831394,0.0024024239,0.000085125794,0.000007166452,0.000105436506,0.000029461582,0.00035707426],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99924225,0.000008723868,0.00024259371,0.00025750324,0.00006367185,0.00018528056],"domain_scores_gemma":[0.9996207,0.0000149179805,0.00008296921,0.00013441574,0.000052100146,0.00009491001],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003839411,0.0001702293,0.00033071113,0.00003560982,0.00008610195,0.000024839805,0.000023724957,0.0000855124,0.00045763393],"category_scores_gemma":[0.0000024096657,0.00013794746,0.00009803878,0.000047342564,0.0000837965,0.000040981216,0.0000075797207,0.000041304305,0.0000018476885],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005516574,0.004505024,0.40046057,0.00083141145,0.004274475,0.00043776867,0.0040066633,0.0000071077807,0.31065685,0.00020702681,0.020645546,0.248451],"study_design_scores_gemma":[0.035595655,0.0031464237,0.7341633,0.000677103,0.0016910277,0.0004506682,0.00017481115,0.0005264917,0.124505706,0.0010735436,0.09689067,0.0011046132],"about_ca_topic_score_codex":0.00018564203,"about_ca_topic_score_gemma":0.000008195618,"teacher_disagreement_score":0.3337027,"about_ca_system_score_codex":0.0000121607645,"about_ca_system_score_gemma":0.00002908201,"threshold_uncertainty_score":0.5625334},"labels":[],"label_agreement":null},{"id":"W2159392515","doi":"10.1128/jb.187.10.3438-3444.2005","title":"The Iron-Regulated <i>iupABC</i> Operon Is Required for Saprophytic Growth of the Intracellular Pathogen <i>Rhodococcus equi</i> at Low Iron Concentrations","year":2005,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Enterprise Ireland","keywords":"Operon; Biology; Rhodococcus equi; Mutant; Microbiology; Siderophore; Pathogen; Intracellular; Virulence; Wild type; Strain (injury); Gene; Biochemistry","score_opus":0.011798306065457603,"score_gpt":0.25523661018118304,"score_spread":0.24343830411572545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2159392515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99422807,0.0012232638,0.00006069551,0.0030864798,0.00051750976,0.00065870513,0.000058834303,0.000008002994,0.00015846487],"genre_scores_gemma":[0.99798656,0.0003572189,0.00013531168,0.00068080967,0.00039128415,0.000018115523,0.000021842718,0.000023498664,0.00038536324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843746,0.00011814498,0.00080928206,0.00015928716,0.00018074567,0.0002950771],"domain_scores_gemma":[0.9981409,0.00013416927,0.00086157955,0.00032223584,0.00040845352,0.00013270273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030439964,0.00017503051,0.00043324148,0.000040700328,0.00026172935,0.000017322014,0.00012339451,0.000128907,0.000080331505],"category_scores_gemma":[0.00014289844,0.00008969036,0.00036200997,0.00009117844,0.0002563602,0.00009047387,0.00004856031,0.00015309782,0.000005366704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015881654,0.0005800601,0.023009613,0.00014102174,0.00051642885,0.00016248313,0.00041544158,0.00006546293,0.9661848,0.00022923123,0.0020682612,0.005039057],"study_design_scores_gemma":[0.028882701,0.010377354,0.23034807,0.0011082775,0.0060601747,0.015915139,0.00030535678,0.0012407901,0.6042099,0.0013551516,0.09923997,0.00095712644],"about_ca_topic_score_codex":0.000009358758,"about_ca_topic_score_gemma":0.000007940994,"teacher_disagreement_score":0.3619749,"about_ca_system_score_codex":0.00027790936,"about_ca_system_score_gemma":0.00030341712,"threshold_uncertainty_score":0.36574668},"labels":[],"label_agreement":null},{"id":"W2181512951","doi":"10.5489/cuaj.3121","title":"Révélation inhabituelle d’un carcinome rénal par un abcès du rein","year":2015,"lang":"fr","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine","score_opus":0.01331139334240674,"score_gpt":0.214216060635147,"score_spread":0.20090466729274026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2181512951","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9234801,0.009353135,0.00014404395,0.042776465,0.0054594814,0.00040774062,0.00013750857,0.000049682556,0.018191863],"genre_scores_gemma":[0.9889539,0.0004004733,0.00011259614,0.0034417324,0.0044578123,0.000014010947,0.0001334609,0.000034700202,0.0024513183],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964119,0.00057839195,0.0007787489,0.0003626247,0.00075544434,0.0011128762],"domain_scores_gemma":[0.99431944,0.00015094514,0.00068435847,0.00019458299,0.0010292813,0.0036214106],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017591936,0.0003343365,0.0005109313,0.0002819141,0.0007085376,0.00020069719,0.000102886326,0.00066668424,0.004076336],"category_scores_gemma":[0.002078849,0.00029924055,0.00032386763,0.0003685113,0.00008883109,0.00027097794,0.000026396163,0.0009438867,0.0007583764],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066082706,0.0002963207,0.95704615,0.000009304681,0.0005825604,0.0077304533,0.0003456486,0.00021642284,0.000007593079,0.0008497593,0.023482068,0.009367627],"study_design_scores_gemma":[0.0034780381,0.00082704815,0.82331735,0.00004749246,0.0008415223,0.005182275,0.00013720813,0.0007593595,0.000023961305,0.005180992,0.1598785,0.00032623566],"about_ca_topic_score_codex":0.0052292827,"about_ca_topic_score_gemma":0.00075932546,"teacher_disagreement_score":0.13639644,"about_ca_system_score_codex":0.007103539,"about_ca_system_score_gemma":0.0028752983,"threshold_uncertainty_score":0.999946},"labels":[],"label_agreement":null},{"id":"W2182969311","doi":"","title":"Bellini duct carcinoma with ovarian metastasis.","year":2004,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Medicine; Ovarian carcinoma; Metastasis; Carcinoma; Oncology; Internal medicine; Gynecology; General surgery; Ovarian cancer; Cancer","score_opus":0.02019405826757812,"score_gpt":0.2199652291783726,"score_spread":0.1997711709107945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2182969311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.971604,0.00033363208,0.00009767406,0.0006331387,0.00011847272,0.00096159254,0.000010218968,0.000095779695,0.026145527],"genre_scores_gemma":[0.997769,0.000011856764,0.00026629886,0.00032320066,0.0001307177,0.0007113281,0.000035990008,0.00002544477,0.0007261858],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990875,0.000010168976,0.00014771619,0.00023744813,0.00020428518,0.00031288445],"domain_scores_gemma":[0.99928373,0.0000071551913,0.000059680628,0.0002794806,0.0000714599,0.00029851164],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000090714704,0.00013625901,0.0002144306,0.00007502682,0.00007648346,0.000017845592,0.000021091399,0.000036176094,0.00005679191],"category_scores_gemma":[0.000022374772,0.00009083761,0.00008750047,0.00015124354,0.000045229106,0.000058061374,0.000010728127,0.000074382086,0.000027550928],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009023096,0.0030313667,0.8219959,0.00019486947,0.0024085958,0.030914493,0.00026586966,0.00007897393,0.000017541897,0.0036229584,0.0004488359,0.13611828],"study_design_scores_gemma":[0.003870756,0.00014249995,0.9866856,0.000011398622,0.0007566481,0.0022854446,0.000017716206,6.6390277e-7,0.001304598,0.00028326976,0.004516098,0.0001253115],"about_ca_topic_score_codex":0.00023595343,"about_ca_topic_score_gemma":0.000021860596,"teacher_disagreement_score":0.16468969,"about_ca_system_score_codex":0.00014971022,"about_ca_system_score_gemma":0.0001307356,"threshold_uncertainty_score":0.37042502},"labels":[],"label_agreement":null},{"id":"W2189209355","doi":"10.5858/133.6.850.b","title":"Notice of retraction: omission of author in \"Malakoplakia outside the urinary tract\" (Arch Pathol Lab Med. 2007;131(2):297-300).","year":2009,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Malakoplakia; Notice; Medicine; Urinary system; Pathology; Anatomy; Law","score_opus":0.027496278300759524,"score_gpt":0.2864138938486082,"score_spread":0.2589176155478487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189209355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97439253,0.0007717425,0.000008630552,0.0018700734,0.0003692454,0.0012944308,0.000016875028,0.00003783622,0.02123862],"genre_scores_gemma":[0.9973795,0.00011896251,0.00006288501,0.000155927,0.0001684503,0.00017315544,0.000022668895,0.000016347043,0.0019021279],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99829084,0.00009562987,0.0005617547,0.0002591672,0.0004544215,0.00033817976],"domain_scores_gemma":[0.99879175,0.000119235956,0.00030334198,0.00043409166,0.00015995975,0.00019162346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007144688,0.00017280086,0.0003859574,0.00017214609,0.00006233554,0.000008521144,0.00006467121,0.00015825784,0.00010094628],"category_scores_gemma":[0.0003771896,0.0001145153,0.00015672714,0.00029238535,0.000072746574,0.0001220056,0.00002059702,0.00029567993,0.0000052215837],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003308843,0.017554041,0.60620046,0.000644243,0.00039375454,0.010931883,0.0016178461,0.000066371555,0.0013161444,0.00059049914,0.0043168156,0.3530591],"study_design_scores_gemma":[0.0016283058,0.00032343937,0.99018854,0.00009652887,0.00025818276,0.0010427916,0.00011119676,0.00003486774,0.0019461161,0.00010182595,0.004166723,0.000101502235],"about_ca_topic_score_codex":0.00011420523,"about_ca_topic_score_gemma":0.0000064602636,"teacher_disagreement_score":0.38398805,"about_ca_system_score_codex":0.0001337999,"about_ca_system_score_gemma":0.00012544879,"threshold_uncertainty_score":0.46697986},"labels":[],"label_agreement":null},{"id":"W2223173481","doi":"","title":"Emphysematous pyelonephritis: a case report and review of the literature.","year":2006,"lang":"en","type":"article","venue":"PubMed","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Medicine; Intensive care medicine","score_opus":0.007530516228161032,"score_gpt":0.22745077758283694,"score_spread":0.2199202613546759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2223173481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89278775,0.09543499,7.862462e-7,0.00040188688,0.00010857583,0.0013139904,0.000016917274,0.000030145862,0.009904951],"genre_scores_gemma":[0.99617696,0.0018675338,0.000012859132,0.0003957587,0.00007530733,0.0005051022,0.00002110248,0.0000104373285,0.000934945],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9992778,0.000021299176,0.000271719,0.00014762982,0.00014595242,0.00013564093],"domain_scores_gemma":[0.99935395,0.000011841669,0.00014980885,0.00030191516,0.00011009908,0.00007236878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015277177,0.00008755574,0.0002171402,0.00002761628,0.00004945143,0.000011210511,0.000012320508,0.000032782187,0.0000081826975],"category_scores_gemma":[0.000107080356,0.00005127838,0.000110554516,0.00016012008,0.0000465453,0.000032536616,0.000021664377,0.00005618417,4.6932652e-7],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002439514,0.00052485784,0.106193416,0.009421195,0.00020826036,0.84270847,0.000047904217,6.140143e-8,0.000008463868,0.0002560169,0.006736032,0.033870902],"study_design_scores_gemma":[0.00044234592,0.0000102651065,0.3348947,0.0019835457,0.00033358528,0.6587195,0.0000027313513,2.35801e-7,0.0001911473,0.00013649036,0.003232435,0.000053055082],"about_ca_topic_score_codex":0.0001361842,"about_ca_topic_score_gemma":0.000016056438,"teacher_disagreement_score":0.22870128,"about_ca_system_score_codex":0.000030273051,"about_ca_system_score_gemma":0.000037500802,"threshold_uncertainty_score":0.20910718},"labels":[],"label_agreement":null},{"id":"W2223821406","doi":"10.1155/2015/581580","title":"A Slowly Growing Flank Mass","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Infectious Diseases and Medical Microbiology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Medicine; Flank; Chills; Erythrocyte sedimentation rate; Abdomen; Nausea; Surgery; Anatomy","score_opus":0.009049655212255588,"score_gpt":0.24153735470447843,"score_spread":0.23248769949222284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2223821406","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9891902,0.006121115,0.00013801167,0.0010426512,0.0010275269,0.00013294666,0.000037474078,0.000017813216,0.0022922307],"genre_scores_gemma":[0.9971932,0.00014876608,0.000031651154,0.002052945,0.00043501053,0.000003373518,0.000026902191,0.000016377713,0.00009176816],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99895966,0.00006190797,0.00036951364,0.00015428395,0.00011075416,0.0003438729],"domain_scores_gemma":[0.99560267,0.000045286743,0.00014775425,0.00011006965,0.00032277178,0.0037714427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021076328,0.00015405637,0.00041148966,0.0002728026,0.00009857925,0.000023900753,0.000047119236,0.00016616899,0.00033015755],"category_scores_gemma":[0.00081589853,0.00011354454,0.00017693764,0.000111241316,0.000249852,0.00008285147,0.000010766189,0.00023202566,0.000014788136],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015006725,0.00022575831,0.9439414,0.000092607435,0.00076584704,0.028612517,0.00015690297,0.000003592061,0.00062142714,0.00064444717,0.009969664,0.014815782],"study_design_scores_gemma":[0.028571373,0.008335742,0.16063923,0.0014757052,0.003930814,0.38679826,0.00076258555,0.00006402846,0.0003405494,0.0055886256,0.40240908,0.0010840134],"about_ca_topic_score_codex":0.001857545,"about_ca_topic_score_gemma":0.00091795455,"teacher_disagreement_score":0.7833021,"about_ca_system_score_codex":0.00027740083,"about_ca_system_score_gemma":0.004505938,"threshold_uncertainty_score":0.79933405},"labels":[],"label_agreement":null},{"id":"W2238510028","doi":"10.5489/cuaj.3225","title":"Xanthogranulomatous pyelonephritis presenting as a pseudotumour","year":2016,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Xanthogranulomatous pyelonephritis; Medicine; Radiology; Internal medicine; Kidney; Nephrectomy","score_opus":0.007516494232069916,"score_gpt":0.23121407638897942,"score_spread":0.22369758215690952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2238510028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9693124,0.0001822075,0.000029334129,0.015589929,0.00028856072,0.0001673602,0.0000240625,0.000054006585,0.014352123],"genre_scores_gemma":[0.99501395,0.00012999811,0.000051632484,0.0020015007,0.00046753642,0.000010860084,0.000006315078,0.000014867703,0.0023033493],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985541,0.00008818958,0.00030075072,0.0001822622,0.0003414724,0.00053319207],"domain_scores_gemma":[0.99821126,0.000094253046,0.00023275566,0.0001005393,0.00028668766,0.0010744948],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031694843,0.00012794988,0.0002272535,0.00016675667,0.0003295748,0.00007943577,0.00004402089,0.0001699871,0.0017613526],"category_scores_gemma":[0.0010688322,0.00007857449,0.00020155455,0.00012790808,0.000027421336,0.00010503609,0.000009996423,0.00021043952,0.0002794263],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020599511,0.00006959131,0.9774264,0.0000024952872,0.00017059666,0.006364079,0.0000206599,3.7535446e-7,0.00017193674,0.00021916786,0.0055842428,0.009949851],"study_design_scores_gemma":[0.0017879137,0.00024600828,0.9062158,0.0000402088,0.00016774586,0.01618359,0.000015937885,0.000007645833,0.00007088212,0.0022851313,0.07283496,0.00014419673],"about_ca_topic_score_codex":0.000872892,"about_ca_topic_score_gemma":0.00020044186,"teacher_disagreement_score":0.07121062,"about_ca_system_score_codex":0.0009536637,"about_ca_system_score_gemma":0.0006090366,"threshold_uncertainty_score":0.9991512},"labels":[],"label_agreement":null},{"id":"W2256346279","doi":"10.1188/15.onf.558-561","title":"Malakoplakia After Allogeneic Hematopoietic Stem Cell Transplantation","year":2015,"lang":"en","type":"article","venue":"Oncology nursing forum","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba","funders":"","keywords":"Medicine; Malakoplakia; Chemotherapy; Hematopoietic stem cell transplantation; Lymphoma; Salvage therapy; Refractory (planetary science); Transplantation; Stem cell; Lung; Pneumonia; Surgery; Pathology; Internal medicine","score_opus":0.0197372045922814,"score_gpt":0.30341653338481095,"score_spread":0.28367932879252955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2256346279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93936425,0.0013041397,0.00043643534,0.0014336368,0.00081823533,0.00037716757,0.000010279195,0.00009805683,0.056157775],"genre_scores_gemma":[0.99735415,0.000041422387,0.00022485416,0.00047534172,0.00007228386,0.000059341386,0.00006272733,0.00002538653,0.0016845115],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99905205,0.000041434825,0.000209333,0.00022603509,0.00015853341,0.00031260113],"domain_scores_gemma":[0.999369,0.000017096416,0.00007906946,0.000178257,0.00008198946,0.0002745626],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000092145485,0.00014346374,0.00025073404,0.000085118954,0.000063184896,0.000009875872,0.000022102939,0.00015401727,0.00007696145],"category_scores_gemma":[0.0000024224712,0.00012151055,0.00009690948,0.00007852158,0.00008632696,0.000059511578,0.000004759386,0.00009703881,0.00013307697],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005819502,0.009191185,0.7859869,0.00057165395,0.0005247538,0.045249935,0.010925422,0.00006518033,0.0017779896,0.00096664415,0.019127514,0.1197933],"study_design_scores_gemma":[0.068790756,0.026097804,0.38598,0.0036563128,0.01573425,0.15261821,0.014864454,0.0005606728,0.04958685,0.008724837,0.27026904,0.0031168035],"about_ca_topic_score_codex":0.000008686173,"about_ca_topic_score_gemma":0.000011047654,"teacher_disagreement_score":0.40000692,"about_ca_system_score_codex":0.00060885,"about_ca_system_score_gemma":0.0004143356,"threshold_uncertainty_score":0.49550563},"labels":[],"label_agreement":null},{"id":"W2276127733","doi":"10.5489/cuaj.3254","title":"Severe emphysematous cystitis: Images in urology","year":2015,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Urology; Medicine","score_opus":0.012832629775417666,"score_gpt":0.24264035211830248,"score_spread":0.22980772234288482,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2276127733","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9646706,0.0005301569,0.000012398847,0.010059475,0.00040241808,0.00016853314,0.000023578894,0.000030019932,0.024102837],"genre_scores_gemma":[0.9956436,0.00002897755,0.00003979927,0.0034061808,0.00025782862,0.000008446994,0.00002115716,0.000009442869,0.00058453536],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988131,0.00011530631,0.0002725186,0.00014736102,0.00023842075,0.00041330382],"domain_scores_gemma":[0.99842554,0.00004333104,0.0001566298,0.00007865783,0.00026671553,0.0010291424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041191926,0.00010803754,0.00024279121,0.00019980519,0.00009221774,0.00004553246,0.000036319798,0.00019603505,0.00030469298],"category_scores_gemma":[0.00084961794,0.000086663335,0.000089968074,0.0001523619,0.000020689515,0.00007821912,0.000007860832,0.0003619275,0.0001174016],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038495047,0.00009131155,0.97582275,0.0000019180068,0.000066882756,0.008522952,0.000050727005,0.000061100036,0.000004075889,0.00008276843,0.0143779935,0.00087902066],"study_design_scores_gemma":[0.002357864,0.00046265224,0.94129366,0.000008313393,0.000105636245,0.012459514,0.000056339653,0.000037684385,0.0000043106224,0.002490852,0.0405928,0.00013040316],"about_ca_topic_score_codex":0.0018983821,"about_ca_topic_score_gemma":0.0011101898,"teacher_disagreement_score":0.034529127,"about_ca_system_score_codex":0.0016745059,"about_ca_system_score_gemma":0.0010914654,"threshold_uncertainty_score":0.43787745},"labels":[],"label_agreement":null},{"id":"W2284841300","doi":"10.1007/978-3-319-17732-8_4","title":"Urosepsis-Pathogenesis and Treatment","year":2015,"lang":"en","type":"book-chapter","venue":"","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Immunosuppression; Immune system; Sepsis; Medicine; Antibiotics; Immunology; Pathogen; Pathogenesis; Hyperplasia; Pseudomonas aeruginosa; Intensive care medicine; Microbiology; Bacteria; Internal medicine; Biology","score_opus":0.06030488598305535,"score_gpt":0.2908541402391484,"score_spread":0.23054925425609307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2284841300","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0028390924,0.0046535586,0.000003944159,0.000061245584,0.00011126212,0.0005283776,0.00006592129,0.00010344266,0.9916332],"genre_scores_gemma":[0.020941984,0.0014899865,0.000088838715,0.0001163706,0.00019309802,0.000024276029,0.00021526667,0.000069001115,0.9768612],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99911165,0.0000032996188,0.00019656455,0.00034966558,0.00020057407,0.00013822856],"domain_scores_gemma":[0.99909264,0.000010333059,0.00008605581,0.00032323747,0.00012273336,0.00036498497],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00003213328,0.00033208556,0.000478464,0.000103617305,0.000045551413,0.000015002735,0.000009918479,0.00019562182,0.001326384],"category_scores_gemma":[0.0000057069024,0.00022051486,0.00017789859,0.000008430311,0.00006972483,0.000017437933,0.000020374962,0.00004943719,0.00017710558],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083648507,0.0021718803,0.02137624,0.00048569927,0.011517305,0.069785215,0.00024200804,0.0000011643182,0.00014672446,0.17741427,0.030464897,0.6855581],"study_design_scores_gemma":[0.0022558677,0.0013202949,0.0013396009,0.00011773135,0.003417825,0.003093063,0.000005362228,0.0000037512395,0.000035017896,0.002043657,0.9860356,0.00033221592],"about_ca_topic_score_codex":0.000034762652,"about_ca_topic_score_gemma":0.0000126264395,"teacher_disagreement_score":0.9555707,"about_ca_system_score_codex":0.00031230383,"about_ca_system_score_gemma":0.00025442013,"threshold_uncertainty_score":0.9995865},"labels":[],"label_agreement":null},{"id":"W2285384438","doi":"10.5489/cuaj.3235","title":"Malakoplakia of the prostate masquerading as locally advanced prostate cancer on mpMRI","year":2015,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Malakoplakia; Prostate; Prostate cancer; Medicine; Malacoplakia; Cancer; Urology; Oncology; Pathology; Internal medicine","score_opus":0.011052673575311962,"score_gpt":0.2523111837414482,"score_spread":0.24125851016613623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2285384438","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97844136,0.00029900405,0.0000023545865,0.011628048,0.00052511,0.00043658903,0.000036518562,0.000015762944,0.008615257],"genre_scores_gemma":[0.99470985,0.0000849004,0.00002121146,0.0030859543,0.00014495003,0.000023687846,0.000008232472,0.000012925859,0.0019082673],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986285,0.00009984716,0.00031015504,0.00015379739,0.00044405047,0.00036367794],"domain_scores_gemma":[0.9981885,0.000035745463,0.0003990636,0.00011645635,0.00050114223,0.0007590974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035978234,0.00012953774,0.00022578235,0.00008902202,0.00018999576,0.000037060418,0.000054906657,0.0001132261,0.0002039088],"category_scores_gemma":[0.0006403417,0.00007789941,0.00013276876,0.00018280493,0.000035012898,0.00006927734,0.00001039643,0.00036071963,0.000023631408],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023716147,0.00010221299,0.98971194,0.000006518197,0.00018927385,0.0006025485,0.00023961416,0.0007480567,0.000039188682,0.00026954236,0.0019423114,0.0059116553],"study_design_scores_gemma":[0.004527081,0.001413981,0.92157817,0.00014077894,0.00028207523,0.0011388576,0.00015406076,0.00018311708,0.00025904764,0.0021637713,0.06794975,0.00020930613],"about_ca_topic_score_codex":0.0010148743,"about_ca_topic_score_gemma":0.0006645367,"teacher_disagreement_score":0.06813374,"about_ca_system_score_codex":0.0018886364,"about_ca_system_score_gemma":0.0017642417,"threshold_uncertainty_score":0.49387184},"labels":[],"label_agreement":null},{"id":"W2313032449","doi":"10.1155/2007/256031","title":"Colonic Malakoplakia in a Liver Transplant Recipient","year":2007,"lang":"en","type":"article","venue":"Canadian Journal of Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Malakoplakia; Malacoplakia; Medicine; Colonoscopy; Diarrhea; Pathology; Tacrolimus; Gastroenterology; Gastrointestinal tract; Internal medicine; Transplantation; Colorectal cancer","score_opus":0.01023751745284092,"score_gpt":0.23549610855792197,"score_spread":0.22525859110508104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2313032449","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99750483,0.00025767554,0.00012365262,0.00033126053,0.0003739012,0.00011919769,0.0000069026096,0.0000025206498,0.0012800497],"genre_scores_gemma":[0.99898607,0.000046106583,0.000087593486,0.0007018292,0.00008635364,0.0000012863217,0.0000046359637,0.000009935909,0.00007619419],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99895895,0.000029962794,0.00039602155,0.0000965665,0.00008991249,0.0004285886],"domain_scores_gemma":[0.9989217,0.00001515586,0.00013919795,0.00009072939,0.000099558194,0.0007336804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033666895,0.000095127194,0.00027377642,0.0005033878,0.000032370957,0.0000057383295,0.00003880844,0.00006518559,0.00018745655],"category_scores_gemma":[0.00002301037,0.00008057755,0.00011632814,0.000074941585,0.00007171229,0.000038892613,0.000002250914,0.00021263176,0.0000061756627],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009801325,0.00009380205,0.91636264,0.000011507418,0.00009514933,0.081450626,0.0001681671,0.000004705083,0.000036693265,0.00004289021,0.00016486096,0.00058883993],"study_design_scores_gemma":[0.0026161543,0.002356535,0.94923264,0.000109352026,0.00012237977,0.04312161,0.000026842676,0.000005680898,0.000037136953,0.00001649252,0.002320151,0.00003500124],"about_ca_topic_score_codex":0.0017132265,"about_ca_topic_score_gemma":0.118185684,"teacher_disagreement_score":0.11647246,"about_ca_system_score_codex":0.00036008045,"about_ca_system_score_gemma":0.0005787134,"threshold_uncertainty_score":0.8979051},"labels":[],"label_agreement":null},{"id":"W2328711745","doi":"10.1016/s1701-2163(16)34140-8","title":"Xanthogranulomatous Inflammation of the Uterus","year":2009,"lang":"en","type":"article","venue":"Journal of Obstetrics and Gynaecology Canada","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Leukocytosis; Uterus; Ultrasound; Fundus (uterus); Homogeneous; Inflammation; Gynecology; Radiology; Surgery; Internal medicine","score_opus":0.006213002205495656,"score_gpt":0.2208333333531195,"score_spread":0.21462033114762386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2328711745","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9942135,0.0014120426,0.0000054530424,0.00036744433,0.002231707,0.00008497143,0.0000032155922,0.0000013080282,0.0016803447],"genre_scores_gemma":[0.9996245,0.000068283596,0.00004207861,0.00018516532,0.000017759505,2.9422702e-7,7.22555e-7,0.0000026228797,0.00005857757],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99936086,0.000017899938,0.00030426536,0.000044014927,0.00018814727,0.00008481922],"domain_scores_gemma":[0.999058,0.00016868247,0.00036989292,0.00008333801,0.00023424665,0.000085822314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007206108,0.000056980924,0.00019540386,0.000083927785,0.000050105078,0.0000044925027,0.000027809343,0.000042283362,0.00003439731],"category_scores_gemma":[0.00068078894,0.000033565397,0.000063903906,0.00015650479,0.000024963336,0.000027071223,0.000006720775,0.00009335199,5.6873848e-8],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011391498,0.00018945061,0.7146607,0.00005138276,0.00023827562,0.00749879,0.00006594898,0.00002628103,0.00013470699,0.00039170103,0.0006672574,0.27606413],"study_design_scores_gemma":[0.0012310666,0.0003223566,0.99355793,0.000008256238,0.00017909739,0.0007792116,0.000021549178,0.000014966105,0.00047331603,0.00017808951,0.0032026027,0.000031587504],"about_ca_topic_score_codex":0.0015843268,"about_ca_topic_score_gemma":0.0015576262,"teacher_disagreement_score":0.27889723,"about_ca_system_score_codex":0.00024078153,"about_ca_system_score_gemma":0.0009272617,"threshold_uncertainty_score":0.23950388},"labels":[],"label_agreement":null},{"id":"W2336184037","doi":"10.1016/j.anndiagpath.2016.03.004","title":"Malakoplakia associated with prostatic adenocarcinoma","year":2016,"lang":"en","type":"review","venue":"Annals of Diagnostic Pathology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Calgary Laboratory Services","funders":"","keywords":"Malakoplakia; Medicine; Prostatitis; Prostate; Biopsy; Prostatectomy; Pathology; Adenocarcinoma; Urology; Urinary system; Carcinoma; Prostate biopsy; Prostate cancer; Cancer; Internal medicine","score_opus":0.08702549692079498,"score_gpt":0.38005275172135705,"score_spread":0.2930272548005621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2336184037","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027385915,0.99321675,0.0000082263,0.0000781327,0.00014048342,0.0015643486,0.0004570084,0.00006021526,0.0017362153],"genre_scores_gemma":[0.008811523,0.98944503,0.00001721049,0.00015764129,0.00008133799,0.00039409436,0.000550245,0.00008644842,0.00045644143],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99777323,0.00021643257,0.0007532841,0.0005104833,0.00026303693,0.00048350537],"domain_scores_gemma":[0.9956929,0.002247511,0.00092424237,0.00055449334,0.00034826354,0.00023260209],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00023040659,0.00048727827,0.0024653634,0.00027696748,0.000048809095,0.0000072442244,0.00007511259,0.00038147205,0.0002453717],"category_scores_gemma":[0.004147094,0.00027575262,0.0004999546,0.00022668457,0.00025423514,0.000040568328,0.000045023575,0.00021043528,0.00012912325],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005668335,0.001798257,0.022579465,0.014858369,0.0032116342,0.073197626,0.000048154736,7.0218746e-8,2.5265717e-7,0.00026336938,0.001416591,0.88256955],"study_design_scores_gemma":[0.005016469,0.009993036,0.062722616,0.27487585,0.02561434,0.03575915,0.000015978334,5.004617e-7,0.00003029762,0.0006844676,0.5836443,0.0016430166],"about_ca_topic_score_codex":0.0000053568406,"about_ca_topic_score_gemma":0.0000030313834,"teacher_disagreement_score":0.8809265,"about_ca_system_score_codex":0.00006047315,"about_ca_system_score_gemma":0.0007986041,"threshold_uncertainty_score":0.9999695},"labels":[],"label_agreement":null},{"id":"W2341990919","doi":"10.4103/0974-7796.171500","title":"Emphysematous pyelonephritis in failed renal allograft:Case report and review of literature","year":2015,"lang":"en","type":"article","venue":"Urology Annals","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University; St. Joseph's Hospital","funders":"","keywords":"Medicine; Surgery; Nephrectomy; Complication; Hemodialysis; Myocardial infarction; Renal function; Percutaneous; Population; Intensive care medicine; Kidney; Internal medicine","score_opus":0.027994429390101588,"score_gpt":0.32761388345785836,"score_spread":0.29961945406775675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341990919","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8725815,0.12322488,0.0000056909917,0.0013460782,0.00006931689,0.0004029042,0.000013966586,0.000027483378,0.0023282217],"genre_scores_gemma":[0.99007607,0.006799471,0.0000842201,0.0026051959,0.00004620505,0.00003814616,0.000110306595,0.000011926686,0.00022848745],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9989333,0.000089494446,0.00042950953,0.00024798178,0.00012313107,0.00017656939],"domain_scores_gemma":[0.99905735,0.000028819559,0.00018176528,0.00026940662,0.00027373756,0.0001889387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004680113,0.00012797707,0.0004700568,0.00012894183,0.000020848474,0.000005428829,0.000015904629,0.00013024654,0.00005375745],"category_scores_gemma":[0.00041333007,0.00010055222,0.0000864739,0.00019268863,0.00008910127,0.000055065804,0.000025490028,0.00014123444,0.0000035344674],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016307438,0.00033060458,0.07394153,0.0011147164,0.00016927294,0.916196,0.00019095329,4.893299e-7,0.000033953762,0.00007815315,0.006129155,0.0016520813],"study_design_scores_gemma":[0.002028605,0.0008307138,0.03004619,0.0026359372,0.0003432687,0.9478053,0.000013866633,0.000009501558,0.00016562756,0.0007865815,0.015187308,0.0001471216],"about_ca_topic_score_codex":0.000054711407,"about_ca_topic_score_gemma":0.000020301659,"teacher_disagreement_score":0.117494576,"about_ca_system_score_codex":0.000011984658,"about_ca_system_score_gemma":0.00012738815,"threshold_uncertainty_score":0.41004005},"labels":[],"label_agreement":null},{"id":"W24070552","doi":"10.1096/fasebj.24.1_supplement.lb20","title":"Lipid raft association with TLR4 and TLR2 in the lungs of foals","year":2010,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Lipid raft; TLR2; TLR4; Respiratory epithelium; Lung; Toll-like receptor; Alveolar Epithelium; Pathology; Immunology; Epithelium; Biology; Medicine; Inflammation; Immune system; Innate immune system; Signal transduction; Cell biology; Internal medicine","score_opus":0.006295440677818695,"score_gpt":0.2440928439728333,"score_spread":0.2377974032950146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W24070552","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99518603,0.00008877374,0.0000072063085,0.0011978687,0.00009733593,0.00015495028,0.0000028398658,0.0000038381527,0.00326116],"genre_scores_gemma":[0.9992392,0.000054601947,0.00002592269,0.00021585295,0.00019012274,0.0000034049747,0.0000019495335,0.000005772265,0.00026316833],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9994067,0.000049846523,0.0001464513,0.000051273757,0.0002384076,0.000107354346],"domain_scores_gemma":[0.99947596,0.00008428452,0.00019156827,0.00011471844,0.00008312654,0.00005037409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006709605,0.00006025003,0.000117949814,0.00003989686,0.00009758477,0.000025482894,0.00002955738,0.00003450798,0.00006834582],"category_scores_gemma":[0.00008913332,0.000024775998,0.00004110591,0.00007009395,0.000036872356,0.000044916847,0.0000065014383,0.00029455786,0.0000020287603],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011099596,0.00021180922,0.98541033,0.000011883124,0.00016913077,0.00031833182,0.0008517187,0.0000016868986,0.0105493935,0.00014536243,0.0004109058,0.001808475],"study_design_scores_gemma":[0.0032922495,0.00047146744,0.9739051,0.00010219315,0.0005995148,0.008746965,0.0004479118,0.00003759292,0.010634272,0.000338435,0.0013467278,0.00007755807],"about_ca_topic_score_codex":0.00003877641,"about_ca_topic_score_gemma":0.000043657546,"teacher_disagreement_score":0.011505195,"about_ca_system_score_codex":0.00003546091,"about_ca_system_score_gemma":0.000086251464,"threshold_uncertainty_score":0.12797238},"labels":[],"label_agreement":null},{"id":"W2467128183","doi":"10.1016/j.jiph.2016.05.001","title":"Immune Reconstitution Syndrome secondary to Rhodococcus equi infection in a patient with HIV and Burkitt's lymphoma","year":2016,"lang":"en","type":"article","venue":"Journal of Infection and Public Health","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Rhodococcus equi; Medicine; Immune reconstitution inflammatory syndrome; Lymphoma; Pneumonia; Chemotherapy; Antibiotics; Immune system; Human immunodeficiency virus (HIV); Immunology; Virus; Virology; Internal medicine; Antiretroviral therapy; Viral load; Microbiology; Biology","score_opus":0.0170730353080471,"score_gpt":0.2762001446908257,"score_spread":0.2591271093827786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467128183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932523,0.00036039972,0.0013607022,0.0036452452,0.00024739694,0.00037097285,0.000005006434,0.000021779779,0.00073624303],"genre_scores_gemma":[0.9979619,0.0012696726,0.0000746967,0.00057208416,0.00005619455,0.000014226386,0.0000034757165,0.000010674139,0.000037103757],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9987521,0.00010449709,0.0005595375,0.00016114888,0.00017943529,0.00024328553],"domain_scores_gemma":[0.9987112,0.00003753615,0.0003987692,0.000098822726,0.00022416834,0.0005294555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005884863,0.0001349887,0.00035741975,0.0006055757,0.00012400516,0.000043992313,0.000008390851,0.00006609912,0.000071632465],"category_scores_gemma":[0.00012868308,0.0000801515,0.00005655464,0.00026543447,0.00005438253,0.00040474112,0.000015374184,0.00011360192,0.000004151911],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022136197,0.00056701666,0.70139474,0.00013375774,0.00011773132,0.00070529094,0.00022245088,0.000002309765,0.00005885599,0.0001299444,0.00013537017,0.2963112],"study_design_scores_gemma":[0.00404786,0.0040346156,0.9214472,0.0006449353,0.00003143511,0.05525631,0.00003383671,0.000004493704,0.000040835108,0.000044002038,0.014315836,0.00009859492],"about_ca_topic_score_codex":0.0009136364,"about_ca_topic_score_gemma":0.0001919598,"teacher_disagreement_score":0.29621258,"about_ca_system_score_codex":0.0006170884,"about_ca_system_score_gemma":0.0010555397,"threshold_uncertainty_score":0.32684833},"labels":[],"label_agreement":null},{"id":"W2515190107","doi":"10.1111/iwj.12661","title":"Cutaneous malakoplakia masquerading as pyoderma gangrenosum","year":2016,"lang":"en","type":"article","venue":"International Wound Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Malakoplakia; Pyoderma gangrenosum; Pathognomonic; Medicine; Dermatology; Basophilic; Malacoplakia; Pyoderma; Pathology; Neutrophilic dermatosis; Disease","score_opus":0.009371901769059594,"score_gpt":0.28510551489867697,"score_spread":0.27573361312961736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515190107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88716555,0.00015340536,0.0005547137,0.0040315106,0.0019274144,0.00011573225,0.000013813807,0.000049644208,0.10598823],"genre_scores_gemma":[0.97900766,0.0002111044,0.00013005147,0.0005535262,0.0010614627,0.0000054307484,0.000008390143,0.000022338494,0.019000059],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.9988462,0.000016775697,0.0003000842,0.00014032048,0.0004839163,0.0002127104],"domain_scores_gemma":[0.9991293,0.00004805974,0.00016219546,0.00011781817,0.0002857076,0.00025693464],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000085356616,0.00013631862,0.00015084169,0.00017097512,0.0001393793,0.000095125724,0.00006738238,0.000054611788,0.0053541022],"category_scores_gemma":[0.000115551935,0.00008267073,0.0001729539,0.000043907134,0.00004328335,0.00018251143,0.0000235177,0.0001414426,0.00048059464],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012807195,0.0014586404,0.7034949,0.000029524379,0.003548771,0.12638158,0.00029795355,0.000012121752,0.013894182,0.014585814,0.013991231,0.121024534],"study_design_scores_gemma":[0.004553915,0.0004847064,0.029458258,0.0005302873,0.00027521054,0.6771013,0.00006238207,0.000037565955,0.002519892,0.009974806,0.27471274,0.0002889253],"about_ca_topic_score_codex":0.000011828349,"about_ca_topic_score_gemma":0.0000024313642,"teacher_disagreement_score":0.6740367,"about_ca_system_score_codex":0.00048379856,"about_ca_system_score_gemma":0.00019512266,"threshold_uncertainty_score":0.99555516},"labels":[],"label_agreement":null},{"id":"W2519951911","doi":"10.1016/s1701-2163(16)34141-x","title":"Inflammation xanthogranulomateuse de l’utérus","year":2009,"lang":"fr","type":"article","venue":"Journal of Obstetrics and Gynaecology Canada","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computational fluid dynamics; Medicine; Hemodynamics; Inflow; Blood flow; Biomedical engineering; Flow (mathematics); Flow visualization; Outflow; In vivo; Mechanics; Nuclear medicine; Internal medicine; Geology; Physics","score_opus":0.0074806028730110725,"score_gpt":0.23657853903372247,"score_spread":0.2290979361607114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2519951911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.880928,0.09153332,0.000041058534,0.0019081106,0.020982869,0.00014475992,0.000018904235,0.0000046637783,0.0044383365],"genre_scores_gemma":[0.99477464,0.003363825,0.00019301921,0.0005275193,0.00024122257,8.200128e-7,0.0000050284953,0.000010722582,0.0008832031],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99847776,0.00007883103,0.0006202094,0.00011731871,0.00028900497,0.0004168777],"domain_scores_gemma":[0.99765116,0.0006886908,0.0005770631,0.00011879927,0.00041807359,0.0005462212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003063517,0.00017245124,0.0004267176,0.00024780675,0.00012694513,0.000032809145,0.00004845467,0.00018979108,0.00038026978],"category_scores_gemma":[0.00259244,0.0001512895,0.00010267965,0.00027566508,0.000059354083,0.0001168461,0.000010880551,0.00029747005,0.0000016113926],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011493982,0.00029287918,0.21165282,0.000106217034,0.0003837395,0.09331323,0.000097891185,0.000091476584,0.00003181696,0.00076433446,0.0024856217,0.6907685],"study_design_scores_gemma":[0.0035298737,0.0013312101,0.9233225,0.000058079488,0.0010410588,0.004247352,0.00013760192,0.00019743669,0.0001689496,0.0007137654,0.06508993,0.00016225298],"about_ca_topic_score_codex":0.012484417,"about_ca_topic_score_gemma":0.0074358713,"teacher_disagreement_score":0.7116697,"about_ca_system_score_codex":0.0025890775,"about_ca_system_score_gemma":0.004572817,"threshold_uncertainty_score":0.9940915},"labels":[],"label_agreement":null},{"id":"W2601915169","doi":"","title":"Cistite enfisematosa em um cão não diabético","year":2016,"lang":"pt","type":"article","venue":"Revista de Educação Continuada em Medicina Veterinária e Zootecnia do CRMV-SP","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Enterobacter aerogenes; Gynecology; Gastroenterology; Pathology; Internal medicine; Chemistry; Escherichia coli","score_opus":0.015864290086061043,"score_gpt":0.2871565766471602,"score_spread":0.27129228656109916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2601915169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9571385,0.023287034,0.001814328,0.002029325,0.0075641656,0.0034991037,0.0006000638,0.00063543464,0.003432085],"genre_scores_gemma":[0.9770684,0.0035435106,0.00025197375,0.0012803659,0.004648014,0.00045894366,0.00019354846,0.0005203928,0.012034817],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98771465,0.00078113674,0.003188942,0.0027444335,0.0021995485,0.0033713095],"domain_scores_gemma":[0.98905265,0.0010091631,0.0018426826,0.0036890092,0.0010191181,0.003387392],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0022784374,0.0023489296,0.0037404357,0.0008354091,0.00075619353,0.00086439686,0.0007974577,0.0011057613,0.009115093],"category_scores_gemma":[0.0032741122,0.0016937065,0.0015154335,0.0010303089,0.00069883704,0.0005315412,0.00050490303,0.0011849654,0.0022132525],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004413145,0.007980785,0.20216992,0.010851795,0.010922657,0.07986502,0.016083503,0.0000018959649,0.037038915,0.0040797493,0.109845944,0.51674664],"study_design_scores_gemma":[0.03508362,0.007915468,0.108140215,0.052823536,0.018533926,0.02475726,0.01001897,0.00016050103,0.0035839374,0.00054129184,0.73148763,0.0069536683],"about_ca_topic_score_codex":0.00029042223,"about_ca_topic_score_gemma":0.00004201357,"teacher_disagreement_score":0.62164164,"about_ca_system_score_codex":0.0022825315,"about_ca_system_score_gemma":0.0026911732,"threshold_uncertainty_score":0.9989249},"labels":[],"label_agreement":null},{"id":"W2605203649","doi":"10.1186/s13256-017-1277-4","title":"Xanthogranulomatous pyelonephritis presenting as acute pleuritic chest pain: a case report","year":2017,"lang":"en","type":"article","venue":"Journal of Medical Case Reports","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; Obstructive uropathy; Differential diagnosis; Emergency department; Nephrectomy; Renal colic; Past medical history; Pulmonary embolism; Pleural effusion; Medical history; Urinary system; Surgery; Kidney; Internal medicine; Pathology","score_opus":0.018707856327867044,"score_gpt":0.34193845734049955,"score_spread":0.3232306010126325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605203649","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99011064,0.0010447968,0.00015184864,0.0025610598,0.00133102,0.00042897358,0.0000058100477,0.00006009174,0.004305748],"genre_scores_gemma":[0.9970206,0.00031292555,0.00032131528,0.0003784622,0.0013736119,0.000019292487,0.000012424859,0.000063335254,0.00049800315],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9941395,0.00014878206,0.0022238975,0.00046423593,0.002462121,0.00056146266],"domain_scores_gemma":[0.9924821,0.00019713723,0.0032683664,0.0012787385,0.00084175816,0.0019318454],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0047031255,0.0003572367,0.0010441705,0.00024892998,0.00086819456,0.00025674558,0.00009768578,0.00036128567,0.00066116394],"category_scores_gemma":[0.011933241,0.0002714682,0.0007706136,0.00010508673,0.00035120055,0.00036514906,0.00015929385,0.00082397513,0.000007416037],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007579974,0.0008430349,0.044775203,0.00024361326,0.0010661668,0.9370383,0.0001064104,2.5888968e-7,0.000024598135,0.000011418876,0.0014999501,0.014315263],"study_design_scores_gemma":[0.0019079953,0.0005234345,0.005467003,0.00089828676,0.0018791239,0.9810043,0.00016442171,0.000062803505,0.00019568557,0.00022101695,0.0074427454,0.00023320716],"about_ca_topic_score_codex":0.0010666571,"about_ca_topic_score_gemma":0.00008399008,"teacher_disagreement_score":0.04396599,"about_ca_system_score_codex":0.00016919544,"about_ca_system_score_gemma":0.0016304443,"threshold_uncertainty_score":0.9999738},"labels":[],"label_agreement":null},{"id":"W2795113008","doi":"10.1093/jscr/rjy050","title":"Prostatic malakoplakia: a case report with review of the literature","year":2018,"lang":"en","type":"article","venue":"Journal of Surgical Case Reports","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of Alberta; University of British Columbia","funders":"","keywords":"Malakoplakia; Medicine; Malacoplakia; Pathology","score_opus":0.00859997773819646,"score_gpt":0.28700028117627757,"score_spread":0.2784003034380811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795113008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9781438,0.016380772,0.0000051388533,0.0006184354,0.00035251878,0.00060937484,0.0000072334474,0.000011104548,0.0038716367],"genre_scores_gemma":[0.99725807,0.0013737465,0.00017313824,0.00018797259,0.0003529708,0.000008509775,0.0000058677283,0.000022914302,0.0006167913],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99731976,0.00008147726,0.0014734503,0.00022166032,0.00070130057,0.00020236666],"domain_scores_gemma":[0.99468184,0.000057887177,0.0023687158,0.00060839765,0.0019714923,0.00031167862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009594766,0.0002075837,0.0007167084,0.00009594352,0.0001257,0.00002177712,0.000020109881,0.00008461353,0.00022297914],"category_scores_gemma":[0.00035798986,0.00009400553,0.00046551286,0.0004927544,0.00021088964,0.00012981615,0.000030146832,0.00032581485,9.538089e-7],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020243318,0.00044044494,0.02134113,0.0023919372,0.00035144488,0.973655,0.000091989066,3.0050458e-7,0.000007659436,0.000009014154,0.0010314557,0.00047717887],"study_design_scores_gemma":[0.00084507506,0.0008573115,0.00085511466,0.016187241,0.0012941168,0.964056,0.00003201138,0.0000010672827,0.0003140378,0.000031194322,0.0154319,0.00009490455],"about_ca_topic_score_codex":0.000023572295,"about_ca_topic_score_gemma":0.000007665698,"teacher_disagreement_score":0.020486016,"about_ca_system_score_codex":0.00009576812,"about_ca_system_score_gemma":0.00068608386,"threshold_uncertainty_score":0.38334343},"labels":[],"label_agreement":null},{"id":"W2796231262","doi":"10.14740/cii.v3i1.41","title":"Emphysematous Pyelonephritis: A Correlation of Clinical Characteristics With Serum Parameters and Its Contribution in Determination of Prognostic Factors","year":2018,"lang":"en","type":"article","venue":"Clinical Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Hypoalbuminemia; Internal medicine; Cirrhosis; Gastroenterology; Bacteremia; Hemodialysis; Area under the curve; Microbiological culture; Septic shock; Sepsis; Antibiotics","score_opus":0.05119834287137456,"score_gpt":0.38195959209572633,"score_spread":0.3307612492243518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2796231262","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987,0.00004585099,0.00040486403,0.000012888796,0.00020877611,0.00052257365,0.000017552391,0.00002020577,0.00006725438],"genre_scores_gemma":[0.9994613,0.00034637834,0.000048259364,0.000026296262,0.000032545802,0.000009332909,0.000060475417,0.000008077172,0.000007319091],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984873,0.00022769839,0.00091004954,0.00016864043,0.00010438621,0.00010193584],"domain_scores_gemma":[0.9983592,0.00045007016,0.0005289205,0.00012452174,0.0004330278,0.00010426172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006267174,0.00010993215,0.0005046655,0.000095859374,0.000063979845,0.000008413713,0.0000109725315,0.00017492009,0.000011965613],"category_scores_gemma":[0.002006325,0.00008517006,0.000076695396,0.00014295247,0.0003119218,0.00011104719,0.000021344007,0.00021937898,0.0000010729943],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039239062,0.0009046622,0.97890407,0.00010397581,0.0000647147,0.000012038081,0.0000722521,1.1249473e-7,0.00004191911,0.00003554563,8.8331694e-7,0.019467419],"study_design_scores_gemma":[0.002678459,0.0037115256,0.9906341,0.000360028,0.00024749115,0.00008817681,0.000022442473,0.0016869616,0.00042590563,0.000059173333,0.000011339512,0.00007440762],"about_ca_topic_score_codex":0.00016663707,"about_ca_topic_score_gemma":0.00006801917,"teacher_disagreement_score":0.019393012,"about_ca_system_score_codex":0.000020923315,"about_ca_system_score_gemma":0.0000797774,"threshold_uncertainty_score":0.3473134},"labels":[],"label_agreement":null},{"id":"W2803133108","doi":"10.1007/s11255-018-1886-x","title":"Pyeloduodenal fistula complicating xanthogranulomatous pyelonephritis","year":2018,"lang":"en","type":"letter","venue":"International Urology and Nephrology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Clinical Evaluative Sciences; University Health Network; Université Laval","funders":"","keywords":"Medicine; Xanthogranulomatous pyelonephritis; Nephrology; General surgery; Internal medicine; Fistula; Urology; Surgery; Nephrectomy; Kidney","score_opus":0.01255493494751536,"score_gpt":0.2739981640594381,"score_spread":0.26144322911192275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803133108","genre_codex":"commentary","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"commentary","genre_consensus":"commentary","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14634362,0.0017786885,0.00013718348,0.81943274,0.0020957133,0.00068154256,0.00027990039,0.00026954064,0.028981054],"genre_scores_gemma":[0.2068174,0.00032939148,0.00024876406,0.78354573,0.0059888475,0.00011795322,0.0015881995,0.000064539345,0.0012991512],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979995,0.000098721,0.0004612969,0.00072643376,0.000260331,0.00045370366],"domain_scores_gemma":[0.9987712,0.00018924821,0.00029195927,0.00034752753,0.0002866837,0.000113376176],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00011260025,0.00037673733,0.00063671387,0.00031786817,0.00018373308,0.000029844286,0.00013383417,0.0011320042,0.0010186316],"category_scores_gemma":[0.00007167663,0.00034427733,0.00019806472,0.00006348462,0.00070180005,0.00004656145,0.00013554572,0.0010603365,0.00018847632],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040025127,0.00019134617,0.018710312,0.00007847774,0.002017878,0.024983406,0.000047913425,3.5307775e-7,0.0001118881,0.0004776925,0.94948894,0.0034915328],"study_design_scores_gemma":[0.0013942252,0.0006367691,0.019825133,0.000032385633,0.00054884487,0.041853063,0.0000019967406,0.00011128434,0.000015117039,0.001731764,0.9336107,0.00023875777],"about_ca_topic_score_codex":0.000077368044,"about_ca_topic_score_gemma":0.000016828642,"teacher_disagreement_score":0.060473785,"about_ca_system_score_codex":0.000064542684,"about_ca_system_score_gemma":0.000113892725,"threshold_uncertainty_score":0.99990094},"labels":[],"label_agreement":null},{"id":"W2883176217","doi":"10.5489/cuaj.5282","title":"Case – Malakoplakia in a 58-year-old male following living donor renal transplantation","year":2018,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Malakoplakia; Malacoplakia; Medicine; Transplantation; Renal transplant; Pathology; Internal medicine","score_opus":0.010451390041455235,"score_gpt":0.23586117445845314,"score_spread":0.2254097844169979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883176217","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98981684,0.00003922242,0.000038732243,0.0009399668,0.00033435004,0.00017022813,0.000020987161,0.000019566394,0.008620088],"genre_scores_gemma":[0.9971823,0.000025871592,0.00011404432,0.0010872863,0.0004644295,0.000009348288,0.000017842545,0.000011780811,0.0010870736],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986962,0.000111325295,0.00033092825,0.00018740779,0.0002328684,0.00044125496],"domain_scores_gemma":[0.9989351,0.000091268266,0.00016477643,0.00007685765,0.0001432577,0.00058875786],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00056478474,0.00012481667,0.00021178964,0.00024603825,0.00031426534,0.000078017554,0.000029281953,0.00018910982,0.0013847612],"category_scores_gemma":[0.00036869146,0.00010575426,0.000163209,0.00020536978,0.000019995172,0.00013223778,0.000004436051,0.00032769179,0.000062639665],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042556574,0.000068333284,0.93415457,0.0000043101695,0.00011137832,0.06422944,0.00021564888,0.0000055354863,0.0000350794,0.00006573515,0.0003837132,0.0006836943],"study_design_scores_gemma":[0.0017298525,0.00043173184,0.9264909,0.00007640842,0.00027448032,0.06829261,0.00007950794,0.00012162892,0.00001633403,0.0001462004,0.0021852695,0.0001551009],"about_ca_topic_score_codex":0.0025230718,"about_ca_topic_score_gemma":0.00934435,"teacher_disagreement_score":0.0076636956,"about_ca_system_score_codex":0.0011025162,"about_ca_system_score_gemma":0.0004061509,"threshold_uncertainty_score":0.9995281},"labels":[],"label_agreement":null},{"id":"W2894906147","doi":"10.1097/md.0000000000012090","title":"Malakoplakia as a cause of severe hypercalcemia through ectopic 25-hydroxyvitamin D3 1-alpha-hydroxylase expression","year":2018,"lang":"en","type":"article","venue":"Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Medical Council of Canada","funders":"","keywords":"Malakoplakia; Medicine; Vitamin D and neurology; Internal medicine; vitamin D deficiency; Cholecalciferol; Endocrinology; Calcitriol; Vitamin; Malacoplakia; Alfacalcidol; Pathology","score_opus":0.021147996220645202,"score_gpt":0.31940168658036694,"score_spread":0.2982536903597217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2894906147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92704254,0.000847331,0.00005555675,0.00055436476,0.0005004213,0.0005461975,0.000014603569,0.000104921826,0.07033408],"genre_scores_gemma":[0.99259084,0.00013993199,0.00017944565,0.00089906744,0.0008725402,0.00003712432,0.00010024929,0.000048467093,0.00513233],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979434,0.000052932108,0.0005598174,0.00047015082,0.0005826795,0.00039100906],"domain_scores_gemma":[0.99836504,0.0000777335,0.00024165318,0.00072619563,0.00026705881,0.00032230042],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00016261039,0.00032772621,0.0006804463,0.00015826142,0.0001383608,0.0000058344135,0.000078750876,0.00016983887,0.0032831603],"category_scores_gemma":[0.00025814044,0.00022113949,0.00013772122,0.00030562878,0.00042802666,0.00012601435,0.00006363841,0.00018813797,0.0002088895],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015029119,0.00615809,0.57542783,0.0025426892,0.0016516069,0.027510371,0.009372555,0.000005591542,0.30154178,0.0012231426,0.062016193,0.01104727],"study_design_scores_gemma":[0.051427834,0.019973341,0.3069114,0.007745245,0.0057547726,0.020890376,0.0014546927,0.00024287307,0.48275736,0.003444602,0.09779618,0.0016013155],"about_ca_topic_score_codex":0.00048018227,"about_ca_topic_score_gemma":0.000018347428,"teacher_disagreement_score":0.26851642,"about_ca_system_score_codex":0.00013737431,"about_ca_system_score_gemma":0.00020240569,"threshold_uncertainty_score":0.997628},"labels":[],"label_agreement":null},{"id":"W2898302540","doi":"10.1016/j.radcr.2018.09.009","title":"Xanthogranulomatous endometritis mimicking endometrial carcinoma: A case report and review of literature","year":2018,"lang":"en","type":"article","venue":"Radiology Case Reports","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"","keywords":"Medicine; Malignancy; Endometritis; Radiology; Carcinoma; Stenosis; Pathology","score_opus":0.012673755507124969,"score_gpt":0.2910866292006974,"score_spread":0.2784128736935724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898302540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8361085,0.15905133,0.000030462012,0.00006001387,0.0007768045,0.0010377531,0.00004161436,0.000077225945,0.002816323],"genre_scores_gemma":[0.9914526,0.006811765,0.00053859176,0.00020139698,0.00061864156,0.00007016877,0.00015999473,0.00004206981,0.00010476945],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99698925,0.00015680326,0.0013942772,0.0007758253,0.00026201594,0.00042181282],"domain_scores_gemma":[0.9967892,0.0002370502,0.0009762658,0.0009116872,0.000700198,0.000385605],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010314344,0.00034996102,0.0012608268,0.00064909924,0.00021774582,0.000019891322,0.000017463515,0.0002567242,0.0001435189],"category_scores_gemma":[0.002699676,0.00028315227,0.000369695,0.00095143134,0.0004466693,0.00009762935,0.00006141189,0.0002355884,0.0000019115844],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077752884,0.00021715005,0.0746356,0.0029229631,0.00038766785,0.9175104,0.00010082978,1.636242e-8,0.00021536152,0.000015102345,0.00070516765,0.0032119993],"study_design_scores_gemma":[0.0018324836,0.0012438489,0.0015877668,0.0029423372,0.0013087644,0.9879766,0.000029074426,0.000002763611,0.00086252333,0.00003621299,0.0019642788,0.0002133585],"about_ca_topic_score_codex":0.0003190686,"about_ca_topic_score_gemma":0.000017407354,"teacher_disagreement_score":0.15534413,"about_ca_system_score_codex":0.00012036292,"about_ca_system_score_gemma":0.0003004613,"threshold_uncertainty_score":0.9999621},"labels":[],"label_agreement":null},{"id":"W2898785665","doi":"10.1186/s13028-018-0419-z","title":"Radiographic and ultrasonographic findings in a dog with emphysematous pyometra","year":2018,"lang":"en","type":"article","venue":"Acta veterinaria Scandinavica","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Pyometra; Medicine; Abdomen; Lumen (anatomy); Anatomy; Uterine horns; Polyuria; Polydipsia; Uterus; Radiography; Radiology; Pathology; Surgery; Internal medicine","score_opus":0.009070503604604896,"score_gpt":0.2674446105692144,"score_spread":0.25837410696460955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898785665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960444,0.00017205013,0.000008993142,0.00016453804,0.00008704201,0.0004872094,0.000008033193,0.00008490643,0.0029428143],"genre_scores_gemma":[0.9992449,0.00015912943,0.00020299938,0.0001334382,0.00007763709,0.00007176983,0.000020308878,0.000037163114,0.00005263906],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986847,0.000027185371,0.00023612675,0.00044095312,0.00021389236,0.00039715943],"domain_scores_gemma":[0.9992296,0.000038191567,0.00007406455,0.00033403691,0.00006498494,0.0002590942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001234841,0.0002546277,0.00038277463,0.0006235497,0.00015385485,0.000063076484,0.00004630084,0.000101924736,0.000113345945],"category_scores_gemma":[0.000023234224,0.00019018781,0.00008732927,0.0009395727,0.0003195809,0.00013569556,0.000027643371,0.00014748517,0.0000070372175],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000610073,0.0004165412,0.9915994,0.000103259634,0.00025737117,0.002748269,0.00036263178,3.5731773e-8,0.002741218,0.00009492682,0.00008873123,0.000977538],"study_design_scores_gemma":[0.003436241,0.0043528914,0.9786667,0.00038583166,0.00024549544,0.01049393,0.000081996564,0.000014619252,0.00033408354,0.00008807984,0.0016418943,0.0002582086],"about_ca_topic_score_codex":0.0002698317,"about_ca_topic_score_gemma":0.000042967724,"teacher_disagreement_score":0.012932677,"about_ca_system_score_codex":0.00006617679,"about_ca_system_score_gemma":0.00006246935,"threshold_uncertainty_score":0.7755634},"labels":[],"label_agreement":null},{"id":"W2920879662","doi":"10.1093/pch/pxz028","title":"A 5-month-old boy with bloody stools","year":2019,"lang":"en","type":"article","venue":"Paediatrics & Child Health","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"St Joseph's Health Centre; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Sick child; University hospital; Medicine; Library science; History; Family medicine; Pediatrics","score_opus":0.007246526417157918,"score_gpt":0.2551156747929092,"score_spread":0.24786914837575127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920879662","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96557885,0.0037992967,0.000034492525,0.0032893666,0.0003438689,0.0017956013,0.000044434353,0.00019537115,0.024918739],"genre_scores_gemma":[0.9929751,0.0008422049,0.00025492208,0.0037944117,0.00047629123,0.000035227382,0.00013405568,0.00005323506,0.0014345364],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99821144,0.000036303063,0.0003489461,0.00042511197,0.0004554815,0.0005227102],"domain_scores_gemma":[0.9985315,0.000034405977,0.00024479566,0.0005345734,0.00011571122,0.00053899497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023846094,0.00023295182,0.00047081997,0.00017757571,0.00017338569,0.000025864043,0.000042744636,0.000081046455,0.0001569142],"category_scores_gemma":[0.000031658183,0.00016709673,0.00013166969,0.00037406452,0.000017020495,0.0000731537,0.000026291298,0.00028786052,0.00027663074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015635665,0.0009691264,0.9917398,0.00037786615,0.00017310331,0.00042905234,0.0002000933,0.0000109624825,0.0000013785417,0.00040928085,0.0023933488,0.0031396262],"study_design_scores_gemma":[0.009039347,0.003766156,0.9601885,0.00024989832,0.00054325914,0.0015245889,0.00014764712,0.00005489275,0.000022071019,0.000088510125,0.023961993,0.00041310114],"about_ca_topic_score_codex":0.00039354104,"about_ca_topic_score_gemma":0.00004043289,"teacher_disagreement_score":0.031551268,"about_ca_system_score_codex":0.00025237573,"about_ca_system_score_gemma":0.0006821412,"threshold_uncertainty_score":0.68140066},"labels":[],"label_agreement":null},{"id":"W2921013756","doi":"10.14740/wjnu374","title":"An Atypical Case of Emphysematous Cystitis in a Young Non-Diabetic Patient","year":2019,"lang":"en","type":"article","venue":"World Journal of Nephrology and Urology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Refractory (planetary science); Urinary system; Diabetes mellitus; Klebsiella pneumoniae; Abdominal pain; Antibiotics; Surgery; Gastroenterology; Internal medicine","score_opus":0.004226918448379008,"score_gpt":0.25041372924706073,"score_spread":0.24618681079868174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921013756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99805796,0.00061882887,0.000013858118,0.00023430334,0.00021789379,0.00017514697,0.0000026494408,0.0000035709654,0.00067576085],"genre_scores_gemma":[0.9989868,0.00004368211,0.000098065204,0.00077680027,0.000056222354,0.0000031521693,0.0000024455753,0.00000940651,0.00002346652],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990454,0.000096846234,0.00045911068,0.00013742672,0.00006933561,0.00019191085],"domain_scores_gemma":[0.99927354,0.00006768358,0.00027430133,0.00014368167,0.0001002271,0.0001405775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013687433,0.000107255146,0.00049140316,0.00033689998,0.0000250327,0.0000027350238,0.00002406376,0.00010406772,0.00017853644],"category_scores_gemma":[0.000016608312,0.00008319141,0.000080505015,0.00010855992,0.000121038676,0.000053164305,0.000016568094,0.00023959442,0.000004654577],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022626838,0.00090095564,0.92662066,0.000050561277,0.00023092613,0.06504822,0.0003593591,0.00004745913,0.001459578,0.00021276688,0.00009290344,0.0027139403],"study_design_scores_gemma":[0.0041879355,0.0072410544,0.7405856,0.000033767283,0.00035280312,0.24596839,0.000060059727,0.00034186544,0.00008787478,0.0004901429,0.000566419,0.00008407181],"about_ca_topic_score_codex":0.00006395686,"about_ca_topic_score_gemma":0.00031688987,"teacher_disagreement_score":0.18603502,"about_ca_system_score_codex":0.000024194856,"about_ca_system_score_gemma":0.00009154583,"threshold_uncertainty_score":0.33924472},"labels":[],"label_agreement":null},{"id":"W2937245365","doi":"10.1186/s13000-019-0799-z","title":"Malakoplakia of the colon following renal transplantation in a 73 year old woman: report of a case presenting as intestinal perforation","year":2019,"lang":"en","type":"review","venue":"Diagnostic Pathology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Malakoplakia; Medicine; Descending colon; Sigmoid colon; Transplantation; Abdominal pain; Diverticulitis; Surgery; Quadrant (abdomen); Lesion; Immunosuppression; Malacoplakia; Pathology; Rectum; Internal medicine","score_opus":0.030405306240159944,"score_gpt":0.3426989211072013,"score_spread":0.3122936148670413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937245365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66303873,0.33317873,0.000016342123,0.000010343232,0.0004020594,0.002001015,0.00005076971,0.000014589716,0.001287432],"genre_scores_gemma":[0.59973055,0.39917895,0.00008779172,0.000015182993,0.000065012144,0.00025115476,0.00046037708,0.000040162715,0.0001707942],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99813044,0.0002116042,0.0009203094,0.0003390848,0.0002068706,0.00019167132],"domain_scores_gemma":[0.9979944,0.00062012457,0.00086630724,0.0003884882,0.00008402431,0.000046661844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036876707,0.00022820778,0.0011182063,0.00021309544,0.000037581794,0.0000049330138,0.00004817296,0.00022562924,0.000026060068],"category_scores_gemma":[0.0021765186,0.00015985235,0.0004510543,0.00025350624,0.000067270594,0.000035317342,0.000031859247,0.00025862202,0.000007943072],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000631251,0.00066940836,0.1659442,0.021831026,0.00031469518,0.7866567,0.00058872224,0.0000108883505,0.000018843726,0.00018140099,0.000020571433,0.02370042],"study_design_scores_gemma":[0.0027120865,0.000825229,0.022623373,0.04489448,0.014564852,0.90757066,0.0001159938,0.00002588044,0.00007529494,0.00008098721,0.006147211,0.00036394404],"about_ca_topic_score_codex":0.00015056286,"about_ca_topic_score_gemma":0.000054201762,"teacher_disagreement_score":0.14332083,"about_ca_system_score_codex":0.000103668426,"about_ca_system_score_gemma":0.0005468175,"threshold_uncertainty_score":0.651859},"labels":[],"label_agreement":null},{"id":"W2943960931","doi":"10.1016/j.idcr.2019.e00559","title":"Xanthogranulomatous prostatitis presenting as Pseudomonas aeruginosa prostatic abscesses: An uncommon complication after kidney transplantation","year":2019,"lang":"en","type":"article","venue":"IDCases","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Prostatitis; Prostate; Chronic bacterial prostatitis; Etiology; Pseudomonas aeruginosa; Transplantation; Surgery; Urology; Pathology; Internal medicine; Cancer","score_opus":0.00799417392388329,"score_gpt":0.280028076053202,"score_spread":0.2720339021293187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943960931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99171585,0.00017006553,0.00007432448,0.00015109657,0.00015516044,0.0017276354,0.00015887356,0.00019454384,0.0056524556],"genre_scores_gemma":[0.99703085,0.00007668084,0.00036075866,0.00045527043,0.000068552836,0.00033660445,0.0013005254,0.00004256671,0.00032816394],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985869,0.000054784887,0.0003427467,0.0004057249,0.0003329835,0.00027683727],"domain_scores_gemma":[0.99894106,0.0000573133,0.0001589127,0.00038510363,0.00016677211,0.00029082465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007592128,0.00022134052,0.00028068796,0.00012662866,0.000114132905,0.00008487949,0.000037380494,0.00006438394,0.00041979825],"category_scores_gemma":[0.000042581527,0.00018817688,0.00009950359,0.00017195182,0.000050342547,0.00032785966,0.000011106735,0.00009056629,0.00023312014],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005084827,0.0011839946,0.9845523,0.0015629238,0.00015071135,0.0047544213,0.0011102073,0.000010854625,0.0026256351,0.00019339609,0.00017395763,0.0031731117],"study_design_scores_gemma":[0.0051455395,0.0013536395,0.961603,0.0011058581,0.0010681852,0.00995025,0.00035720054,0.00057223026,0.015232092,0.00083025434,0.002196183,0.0005855608],"about_ca_topic_score_codex":0.00057880714,"about_ca_topic_score_gemma":0.00004798492,"teacher_disagreement_score":0.022949297,"about_ca_system_score_codex":0.00006232506,"about_ca_system_score_gemma":0.00018922507,"threshold_uncertainty_score":0.7673631},"labels":[],"label_agreement":null},{"id":"W2947678479","doi":"10.1503/cmaj.181542","title":"Emphysematous cystitis associated with voiding dysfunction from herpes zoster","year":2019,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Rash; Urine; Shingles; Varicella zoster virus; Burning Sensation; Surgery; Internal medicine; Immunology; Virus","score_opus":0.004020361600605883,"score_gpt":0.20110301174739606,"score_spread":0.1970826501467902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947678479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98635095,0.00013363177,0.00003579141,0.002750141,0.000927958,0.00020429309,0.000042118827,0.00003923306,0.00951586],"genre_scores_gemma":[0.99357325,0.000028724688,0.000019544532,0.0037286463,0.000719158,0.0000067950273,0.000120811084,0.000027962795,0.0017751242],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99775124,0.00009180871,0.00033227325,0.00019624534,0.001216578,0.0004118609],"domain_scores_gemma":[0.99761504,0.00012407496,0.00028877013,0.00011562091,0.00045857715,0.001397926],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004493807,0.00015287659,0.00031675704,0.00015254505,0.00021943325,0.00009697889,0.00004239384,0.00031304697,0.0075145722],"category_scores_gemma":[0.00066376466,0.000117890355,0.00012386109,0.00018519702,0.00001823288,0.00014594656,0.000006457006,0.00043827918,0.0003982265],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038652477,0.00013202243,0.96542406,0.000008280709,0.0011107973,0.006541528,0.00013109385,0.0000045989436,0.0000124979915,0.000021650616,0.012566049,0.014008766],"study_design_scores_gemma":[0.0064382413,0.00042015652,0.9244941,0.00083239016,0.0004982351,0.0031394914,0.00029882215,0.0002864123,0.000046542722,0.000119494274,0.06312389,0.00030224313],"about_ca_topic_score_codex":0.004818549,"about_ca_topic_score_gemma":0.014089759,"teacher_disagreement_score":0.050557837,"about_ca_system_score_codex":0.0021493523,"about_ca_system_score_gemma":0.0024371187,"threshold_uncertainty_score":0.9933927},"labels":[],"label_agreement":null},{"id":"W2954422037","doi":"10.1016/j.ekir.2019.05.1137","title":"MON-322 EMPHYSEMATOUS PYELONEPHRITIS PRESENTING WITH ACUTE KIDNEY INJURY, TREATED WITH ANTIBIOTICS IN A BLACK WOMAN IN SUB-SAHARAN AFRICA – A CASE REPORT","year":2019,"lang":"en","type":"article","venue":"Kidney International Reports","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Parenchyma; Urinary system; Renal parenchyma; Antibiotics; Acute kidney injury; Kidney; Adipose capsule of kidney; Glycemic; Internal medicine; Surgery; Pathology; Diabetes mellitus; Endocrinology","score_opus":0.007278895694363746,"score_gpt":0.2585041348132972,"score_spread":0.25122523911893346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954422037","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97528017,0.000030450987,0.000010686494,0.0004494982,0.00023398822,0.0014728981,0.0001224666,0.00011753263,0.02228231],"genre_scores_gemma":[0.995325,0.00006456143,0.00022938149,0.000310826,0.00008125177,0.000042474818,0.000943497,0.000086950444,0.0029160255],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.996636,0.000042052092,0.0010430139,0.0008978169,0.0008634303,0.00051769346],"domain_scores_gemma":[0.9974718,0.00002686795,0.00072756776,0.00071321987,0.0004050263,0.00065551716],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00027536234,0.00042362287,0.00064715574,0.00062178686,0.000059589936,0.00009666203,0.000066449764,0.00014871555,0.00019397438],"category_scores_gemma":[0.00036154588,0.00033334567,0.00014025759,0.00056692417,0.000105823994,0.00030366672,0.00007266624,0.0003152212,0.000025876396],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033887025,0.0006596427,0.48038402,0.00006939518,0.00051149615,0.51519716,0.0001447979,0.000010248577,0.00041957624,0.0000060539032,0.0022065635,0.00005217716],"study_design_scores_gemma":[0.004172463,0.0005538077,0.18738708,0.001499667,0.00041460255,0.7945299,0.000048255402,0.0005698485,0.0048406897,0.00005594961,0.0054204618,0.0005072412],"about_ca_topic_score_codex":0.00206791,"about_ca_topic_score_gemma":0.00014999036,"teacher_disagreement_score":0.29299694,"about_ca_system_score_codex":0.0004928753,"about_ca_system_score_gemma":0.0010473622,"threshold_uncertainty_score":0.99991184},"labels":[],"label_agreement":null},{"id":"W2966663290","doi":"10.3949/ccjm.86a.18096","title":"When does acute pyelonephritis require imaging?","year":2019,"lang":"en","type":"article","venue":"Cleveland Clinic Journal of Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fraser Health","funders":"","keywords":"Medicine; Dysuria; Nausea; Vomiting; Tenderness; Blood pressure; Emergency department; Flank pain; Heart rate; Anesthesia; Chest pain; Surgery; Internal medicine; Urinary system","score_opus":0.012856127894026709,"score_gpt":0.31633963283507094,"score_spread":0.30348350494104426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966663290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97275406,0.0029146315,0.00011213782,0.0087748915,0.0023119678,0.00028547787,0.000010893495,0.000026891636,0.012809047],"genre_scores_gemma":[0.9851849,0.0015232088,0.00023452786,0.002222691,0.0012664001,0.0000021884484,0.000015467756,0.00003077578,0.009519848],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979549,0.00004756965,0.0009797042,0.00020265387,0.0005530371,0.0002621005],"domain_scores_gemma":[0.9980676,0.00013191257,0.00066761073,0.00031338225,0.00043774775,0.00038175719],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00071816664,0.00019610573,0.0007891084,0.00018597346,0.00005189646,0.000011340822,0.0000831552,0.00008424836,0.005861702],"category_scores_gemma":[0.0002241392,0.000101985854,0.0002576651,0.00009975091,0.00016551898,0.0001918892,0.000025932628,0.00036547045,0.00013326554],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011943553,0.00051496323,0.88946354,0.0001861829,0.0017416779,0.01272044,0.00054564985,1.8207912e-7,0.00067551725,0.00009319632,0.031319033,0.06154523],"study_design_scores_gemma":[0.06364069,0.008318521,0.6129648,0.0063037076,0.0062978338,0.07506589,0.001498891,0.0000375407,0.00040387598,0.011566322,0.21331836,0.0005835723],"about_ca_topic_score_codex":0.0000174901,"about_ca_topic_score_gemma":0.0000017176295,"teacher_disagreement_score":0.2764988,"about_ca_system_score_codex":0.00008820831,"about_ca_system_score_gemma":0.00028124684,"threshold_uncertainty_score":0.9950471},"labels":[],"label_agreement":null},{"id":"W2972975069","doi":"10.1016/j.ajur.2019.09.002","title":"Minimally invasive nephrectomy for inflammatory renal disease","year":2019,"lang":"en","type":"article","venue":"Asian journal of urology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto","funders":"","keywords":"Medicine; Nephrectomy; Contraindication; Renal hilum; Surgery; Laparoscopy; Kidney disease; Retrospective cohort study; Complication; Blood transfusion; Kidney; Internal medicine; Pathology","score_opus":0.007465325139475118,"score_gpt":0.2475254945970903,"score_spread":0.24006016945761519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972975069","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99373263,0.0004495014,0.000046475456,0.0016999001,0.00038856675,0.00037864398,0.000007421414,0.000010181938,0.0032866898],"genre_scores_gemma":[0.9982331,0.000022789876,0.00025204784,0.0007896073,0.00032816746,0.00000958002,0.00001017673,0.000020236215,0.00033431742],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99911606,0.000036599668,0.0003728079,0.00012874785,0.00014364012,0.00020214748],"domain_scores_gemma":[0.9988,0.000082115424,0.00033852924,0.00016451723,0.00026899652,0.0003458396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013875228,0.00011785459,0.00031199012,0.0001633804,0.000033512108,0.000008506055,0.0000455213,0.00006429619,0.00027953502],"category_scores_gemma":[0.00025625704,0.00008980633,0.00027969573,0.000047457776,0.00004657585,0.00008236744,0.000012850701,0.00013369898,0.00004551407],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0076749586,0.00066105096,0.9632345,0.0002181816,0.0014286455,0.012282732,0.00030396553,0.000030881885,0.003392063,0.0005224033,0.0035610332,0.0066895913],"study_design_scores_gemma":[0.020878341,0.01085884,0.8149781,0.00021109908,0.0030734967,0.015592681,0.00023896269,0.000050549683,0.0010361595,0.003193497,0.12951155,0.00037668148],"about_ca_topic_score_codex":4.9766334e-7,"about_ca_topic_score_gemma":0.000001654646,"teacher_disagreement_score":0.14825635,"about_ca_system_score_codex":0.000051544986,"about_ca_system_score_gemma":0.0007492008,"threshold_uncertainty_score":0.36621958},"labels":[],"label_agreement":null},{"id":"W2973599372","doi":"10.1016/j.carj.2019.07.002","title":"Imaging Manifestations of Acute and Chronic Renal Infection That Mimics Malignancy: How to Make the Diagnosis Using Computed Tomography and Magnetic Resonance Imaging","year":2019,"lang":"en","type":"review","venue":"Canadian Association of Radiologists Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; Ottawa Hospital; University of Ottawa","funders":"","keywords":"Medicine; Malignancy; Renal cell carcinoma; Magnetic resonance imaging; Kidney disease; Radiology; Pathology; Fever of unknown origin; Internal medicine","score_opus":0.028055659439789573,"score_gpt":0.29526843960267835,"score_spread":0.2672127801628888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2973599372","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010713255,0.9869789,0.00011467444,0.00050773117,0.0003271593,0.00086185173,0.00041564938,0.000010335111,0.00007044317],"genre_scores_gemma":[0.03880808,0.9604285,0.0002607983,0.00010507661,0.00016942185,0.000025753954,0.000095294985,0.000033987264,0.000073136725],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985007,0.00021172313,0.00047644303,0.00025617675,0.00022267853,0.00033224432],"domain_scores_gemma":[0.9978682,0.00018601996,0.0011579009,0.00018677913,0.00030270065,0.0002984415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004677983,0.00026373542,0.0008705501,0.000634401,0.00024955347,0.00009544629,0.000058873993,0.00013208788,0.000010625949],"category_scores_gemma":[0.00014159986,0.00019974873,0.00028951422,0.00032936694,0.00010232704,0.000085560736,0.00002362955,0.00032316186,4.500049e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000058921933,0.00002733049,0.5123643,0.0012500248,0.0006840478,0.0007781555,0.00008277811,0.000009026804,0.000003317196,0.00002893352,0.0009623206,0.4838038],"study_design_scores_gemma":[0.0019828829,0.0004310625,0.51414496,0.018844366,0.014413367,0.036232237,0.000044206165,0.0005580322,0.0000051493544,0.00008451101,0.41260487,0.00065433426],"about_ca_topic_score_codex":0.0016762724,"about_ca_topic_score_gemma":0.0023926022,"teacher_disagreement_score":0.48314947,"about_ca_system_score_codex":0.0018125951,"about_ca_system_score_gemma":0.0013557187,"threshold_uncertainty_score":0.8145517},"labels":[],"label_agreement":null},{"id":"W3007740734","doi":"10.1093/jcag/gwz047.254","title":"A255 EMPHYSEMATOUS CYSTITIS: A MARKER OF SEVERE CROHN’S DISEASE?","year":2020,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital","funders":"","keywords":"Medicine; Pancolitis; Hypoalbuminemia; Urinalysis; Diarrhea; Gastroenterology; Urinary system; Abdominal pain; Internal medicine; Crohn's disease; Cystoscopy; Dysuria; Colonoscopy; Surgery; Disease","score_opus":0.007571881925923169,"score_gpt":0.21916721031199304,"score_spread":0.21159532838606987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3007740734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98653454,0.00003824644,0.000010331355,0.012387617,0.00026864273,0.000154663,0.00008898618,0.0000029280104,0.0005140521],"genre_scores_gemma":[0.9972519,0.000015110441,0.000039986822,0.0023543856,0.0001172115,0.0000016091021,0.000004377698,0.000010794689,0.0002045991],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9988098,0.00012291272,0.0004910934,0.00007809345,0.0003010873,0.00019702117],"domain_scores_gemma":[0.9977258,0.000024142992,0.0011794923,0.000117272706,0.00046786008,0.00048542526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019748053,0.000089677866,0.00038666077,0.00010377002,0.000049759703,0.000006448417,0.00007800696,0.00006148641,0.00012330164],"category_scores_gemma":[0.00047978017,0.00006594546,0.00032946334,0.000086049375,0.00004015293,0.00004583283,0.000016175405,0.00015139229,0.0000021288074],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006219363,0.0000886162,0.989375,0.000063332605,0.00065254443,0.00064045493,0.000086498476,0.00005390892,0.00004053771,0.000017657538,0.008298406,0.00006113048],"study_design_scores_gemma":[0.0018041291,0.00045532256,0.9956533,0.000093723815,0.00054028566,0.00044628943,0.000020800373,0.00002339662,0.000012318256,0.000055924844,0.0008668537,0.000027696558],"about_ca_topic_score_codex":0.0012766073,"about_ca_topic_score_gemma":0.009431958,"teacher_disagreement_score":0.010717391,"about_ca_system_score_codex":0.0006445353,"about_ca_system_score_gemma":0.0008456508,"threshold_uncertainty_score":0.5263254},"labels":[],"label_agreement":null},{"id":"W3014762708","doi":"10.1093/jac/dkaa104","title":"Indications for the use of highest priority critically important antimicrobials in the veterinary sector","year":2020,"lang":"en","type":"review","venue":"Journal of Antimicrobial Chemotherapy","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Engineering and Physical Sciences Research Council; Medical Research Council","keywords":"Critically ill; Medicine; Veterinary medicine; Antimicrobial; Intensive care medicine; Biology; Microbiology","score_opus":0.11232476418108651,"score_gpt":0.37374885533021973,"score_spread":0.26142409114913323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014762708","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008575578,0.978986,0.00029435486,0.0064496133,0.00070083217,0.004371582,0.000575404,0.000018949702,0.000027644604],"genre_scores_gemma":[0.0033104033,0.99295646,0.0011265059,0.0019153653,0.000528143,0.0000219855,0.000052268857,0.000070871334,0.000017988705],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997293,0.00015878622,0.0017869002,0.00023310755,0.0002706798,0.00025752094],"domain_scores_gemma":[0.99657613,0.0007250225,0.001759857,0.00041933666,0.0004137994,0.00010582421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005436331,0.00037638168,0.0018865167,0.00021491194,0.00010850606,0.00007698037,0.00026566576,0.00022799725,0.000046670782],"category_scores_gemma":[0.0002980283,0.00018878872,0.0014354155,0.00036657293,0.00017279034,0.00010260338,0.00002526793,0.00053023594,0.0000015942046],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003573623,0.013304551,0.002180281,0.054825988,0.015269861,0.01093599,0.002037221,0.0000053697117,0.008175857,0.00030217803,0.11185149,0.7775376],"study_design_scores_gemma":[0.001541854,0.00074477505,0.00039477108,0.0050018583,0.0027761203,0.006831674,0.000009024174,0.0000019041843,0.00014942187,0.000008252468,0.9823687,0.00017162673],"about_ca_topic_score_codex":0.000019611609,"about_ca_topic_score_gemma":0.0000024646122,"teacher_disagreement_score":0.87051725,"about_ca_system_score_codex":0.00015197488,"about_ca_system_score_gemma":0.0012688809,"threshold_uncertainty_score":0.76985806},"labels":[],"label_agreement":null},{"id":"W3025273536","doi":"10.22374/cjgim.v14i4.330","title":"Emphysematous Pyelitis With Query Intraparenchymal Involvement","year":2019,"lang":"en","type":"article","venue":"Canadian Journal of General Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Context (archaeology); Resuscitation; Medical history; Blood sugar; Past medical history; Surgery; Diabetes mellitus; Endocrinology","score_opus":0.009786378715582942,"score_gpt":0.24238745389441843,"score_spread":0.2326010751788355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3025273536","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9812897,0.0015634604,0.000084155035,0.0014377511,0.0011404392,0.00023451372,0.0000084178555,0.000008020198,0.014233578],"genre_scores_gemma":[0.99351066,0.00005506984,0.00019719635,0.0016281502,0.0011116426,0.0000036293004,0.00001648773,0.00002848207,0.003448682],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998524,0.000027231647,0.00054648024,0.00017132662,0.0003876101,0.00034334583],"domain_scores_gemma":[0.997652,0.000021357791,0.00031775673,0.00021763972,0.00049034663,0.0013008799],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00017688576,0.00020694523,0.00053185504,0.0004304125,0.000044263485,0.000021748701,0.00008752252,0.00005852216,0.0020437352],"category_scores_gemma":[0.000050821163,0.00012742898,0.00012856726,0.00014526026,0.00014367049,0.00010322018,0.000007234005,0.0002682785,0.0000328941],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000472386,0.00012723524,0.92588496,0.00017716827,0.001362101,0.04075552,0.000763253,0.000052686602,0.0017291266,0.00062700146,0.021316111,0.006732459],"study_design_scores_gemma":[0.026693098,0.033391573,0.6012567,0.012094666,0.0027143578,0.17549655,0.0018970127,0.0002731727,0.006809954,0.0009892785,0.13729806,0.0010855574],"about_ca_topic_score_codex":0.020680914,"about_ca_topic_score_gemma":0.0072139823,"teacher_disagreement_score":0.32462823,"about_ca_system_score_codex":0.00041627587,"about_ca_system_score_gemma":0.0014395427,"threshold_uncertainty_score":0.9988685},"labels":[],"label_agreement":null},{"id":"W3040827127","doi":"10.1016/j.ejim.2020.06.027","title":"Beware of the air when diabetes is there","year":2020,"lang":"en","type":"article","venue":"European Journal of Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cascades (Canada)","funders":"","keywords":"Medicine; Urinalysis; Emergency department; Complete blood count; White blood cell; Internal medicine; Gastroenterology; Urine","score_opus":0.01792846253298709,"score_gpt":0.24571523795677597,"score_spread":0.2277867754237889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3040827127","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9595419,0.0018036418,0.000099111676,0.01551236,0.00042863953,0.00010313486,0.0000059605054,0.000009402757,0.022495823],"genre_scores_gemma":[0.9910493,0.000046067886,0.000050355353,0.0074921246,0.0009578037,2.2705278e-7,6.654891e-7,0.000026372127,0.00037710177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986135,0.0001268763,0.0006115995,0.00009980626,0.00042952184,0.000118737116],"domain_scores_gemma":[0.9985827,0.00003391841,0.0006302732,0.00017355933,0.00032306724,0.00025643886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028953177,0.00013169741,0.00037189506,0.000053521864,0.000031103395,0.0000037952768,0.00015574931,0.000013518878,0.0008646503],"category_scores_gemma":[0.00037806938,0.000061736006,0.00024790282,0.00008893245,0.00013402851,0.00004234221,0.000054289405,0.000265845,0.000016710566],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005144761,0.00027561435,0.9013775,0.0003145897,0.0017283373,0.008343043,0.006036955,0.0000061280793,0.0059990543,0.000026169644,0.06172817,0.01364998],"study_design_scores_gemma":[0.009765546,0.009354224,0.8651509,0.0073824497,0.0019109272,0.003471982,0.0010130665,0.000058469326,0.022126002,0.000115915966,0.07946192,0.00018855075],"about_ca_topic_score_codex":0.000006712485,"about_ca_topic_score_gemma":1.9424414e-7,"teacher_disagreement_score":0.03622654,"about_ca_system_score_codex":0.000031225838,"about_ca_system_score_gemma":0.000059785903,"threshold_uncertainty_score":0.94673145},"labels":[],"label_agreement":null},{"id":"W3093424471","doi":"10.1111/eve.13389","title":"Medical management of a large intra‐abdominal mass caused by <i>Rhodococcus equi</i> in a foal","year":2020,"lang":"en","type":"article","venue":"Equine Veterinary Education","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thinkpath Engineering Services (Canada); University of Guelph","funders":"","keywords":"Medicine; Foal; Rhodococcus equi; Abdominal ultrasonography; Abdominal mass; Abscess; Horse; Radiology; Abdomen; Surgery; Computed tomography","score_opus":0.02244137311451194,"score_gpt":0.33708399733563393,"score_spread":0.314642624221122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093424471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9913871,0.00051675085,0.0003493357,0.002657072,0.00025670006,0.00058333646,0.000022259133,0.000038868435,0.004188526],"genre_scores_gemma":[0.9977368,0.000102807404,0.00032572218,0.001097125,0.00014602326,0.00013434653,0.00023879374,0.000021062651,0.0001973286],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99871397,0.000046337853,0.00038396975,0.00027688596,0.00034221294,0.00023660243],"domain_scores_gemma":[0.9993412,0.000016466882,0.000113481285,0.00018878115,0.00005258284,0.00028752445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015877982,0.00015158748,0.0002695643,0.00008214522,0.000028184519,0.000008003888,0.00005458647,0.000068966765,0.0006757168],"category_scores_gemma":[0.000037529888,0.00013773769,0.0000778684,0.00024013183,0.000033746415,0.000071913375,0.000054065054,0.00011419051,0.00002434563],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.010647927,0.0453636,0.2794908,0.014909141,0.0031353543,0.043171134,0.0065230667,0.000011271635,0.24503018,0.0032082808,0.09339926,0.25510997],"study_design_scores_gemma":[0.096786015,0.09701032,0.32790533,0.010892873,0.0052013476,0.008753653,0.0119021265,0.007009358,0.026871517,0.0014625299,0.4021024,0.004102495],"about_ca_topic_score_codex":0.000042736163,"about_ca_topic_score_gemma":0.0000012827098,"teacher_disagreement_score":0.30870315,"about_ca_system_score_codex":0.00013090315,"about_ca_system_score_gemma":0.00031814398,"threshold_uncertainty_score":0.7398625},"labels":[],"label_agreement":null},{"id":"W3093511104","doi":"10.14309/01.ajg.0000708808.28929.a3","title":"S1690 A Case of Rhodococcus Related Colonic Malakoplakia in a Renal Transplant Patient","year":2020,"lang":"en","type":"article","venue":"The American Journal of Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Malakoplakia; Medicine; Immunosuppression; Pathology; Colonoscopy; Gastroenterology; Internal medicine; Colorectal cancer; Cancer","score_opus":0.008814114081765979,"score_gpt":0.24777506209522968,"score_spread":0.2389609480134637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093511104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.997412,0.00008936573,0.0000564338,0.002133862,0.000051713738,0.00017726337,0.000011805588,0.0000055657906,0.00006195872],"genre_scores_gemma":[0.99881333,0.00007107557,0.00009949987,0.0009671189,0.000028510982,0.00000398534,0.0000021939393,0.000011827744,0.0000024800202],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99864864,0.00022529409,0.0006612154,0.00011157314,0.00013084727,0.0002224488],"domain_scores_gemma":[0.9987038,0.00004745103,0.0008372343,0.00012545782,0.00010252466,0.00018355169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017022512,0.000119654906,0.0006319223,0.00011148824,0.000024542016,0.0000028871075,0.000054489654,0.000020680349,0.000044121112],"category_scores_gemma":[0.000038679962,0.000073727926,0.00019478593,0.00017139986,0.00026276134,0.000029893441,0.00001652648,0.00028210977,0.0000017500532],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.04100218,0.0008717483,0.75429547,0.00003470417,0.001098414,0.193377,0.0036242513,0.0003327185,0.001814178,0.000020072835,0.00008250701,0.0034467892],"study_design_scores_gemma":[0.009534118,0.1024001,0.2609841,0.00027212084,0.00128803,0.62350196,0.0009943509,0.00030393092,0.00043698773,0.000056714984,0.000121763966,0.00010583323],"about_ca_topic_score_codex":0.00008114673,"about_ca_topic_score_gemma":0.000036937698,"teacher_disagreement_score":0.49331135,"about_ca_system_score_codex":0.000053195403,"about_ca_system_score_gemma":0.00010128943,"threshold_uncertainty_score":0.30065376},"labels":[],"label_agreement":null},{"id":"W3186981493","doi":"10.48083/nslu7720","title":"Pyeloduodenal Fistula in Xanthogranulomatous Pyelonephritis","year":2021,"lang":"fr","type":"article","venue":"Société Internationale d’Urologie Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Xanthogranulomatous pyelonephritis; Renal parenchyma; Medicine; Fistula; Parenchyma; Chronic pyelonephritis; Complication; Urinary system; Surgery; Pathology; Internal medicine; Kidney; Nephrectomy","score_opus":0.02469000168291662,"score_gpt":0.32472244561399183,"score_spread":0.3000324439310752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3186981493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8223565,0.095928095,0.00039089096,0.012810389,0.014371515,0.00031512533,0.00019835628,0.00007380017,0.053555284],"genre_scores_gemma":[0.9499438,0.01920568,0.00048288537,0.001981858,0.0032681378,0.00003286152,0.0002242943,0.000049430477,0.024811082],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9962283,0.00036872507,0.0010892821,0.000528068,0.00089657964,0.0008890486],"domain_scores_gemma":[0.9976072,0.00037617885,0.00046405662,0.00030946347,0.0007842768,0.0004588695],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006920235,0.00040614474,0.0006736712,0.00032718774,0.00027761539,0.0002377137,0.0001793866,0.00039240028,0.009127165],"category_scores_gemma":[0.0011262395,0.00041208294,0.0006954439,0.0003657363,0.0002682964,0.00034530778,0.00014927931,0.001307624,0.00020134833],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027027912,0.003514386,0.5873244,0.00016572326,0.0019676867,0.23871236,0.00043902348,0.0002929367,0.00029712394,0.0039507295,0.0127411345,0.15032423],"study_design_scores_gemma":[0.011567768,0.00063438714,0.63203645,0.0016153012,0.000921828,0.15872787,0.00139648,0.000986335,0.0010129203,0.0130862435,0.17727558,0.00073885993],"about_ca_topic_score_codex":0.0001195246,"about_ca_topic_score_gemma":0.00014976377,"teacher_disagreement_score":0.16453445,"about_ca_system_score_codex":0.0013273825,"about_ca_system_score_gemma":0.0016993971,"threshold_uncertainty_score":0.9998331},"labels":[],"label_agreement":null},{"id":"W3199276935","doi":"10.1016/j.micpath.2021.105186","title":"Cellulitis-related Rhodococcus equi in a cat harboring VAPA-type plasmid pattern","year":2021,"lang":"en","type":"article","venue":"Microbial Pathogenesis","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vétoquinol (Canada)","funders":"Conselho Nacional de Desenvolvimento Científico e Tecnológico; Fundação de Amparo à Pesquisa do Estado de São Paulo","keywords":"Rhodococcus equi; Virulence; Microbiology; Biology; Plasmid; Pathogen; Virology; Genetics","score_opus":0.014393536327081834,"score_gpt":0.2509656650121592,"score_spread":0.23657212868507738,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199276935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959805,0.00085643877,0.000026714846,0.00013922539,0.0007072737,0.00032590862,0.00006839993,0.000092889444,0.0018026537],"genre_scores_gemma":[0.9978431,0.00013160575,0.00013048034,0.00034248357,0.00012805444,0.00002246483,0.00028926152,0.000057462843,0.0010551289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983507,0.00007912519,0.00044311487,0.0005214638,0.00016409134,0.00044153695],"domain_scores_gemma":[0.9991183,0.000029840432,0.00009820528,0.00038530043,0.00016809761,0.00020024758],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00011347688,0.00025558396,0.00042344036,0.00015287782,0.00009272786,0.000036174584,0.00004201895,0.00016023353,0.0007880119],"category_scores_gemma":[0.00005983711,0.00025224918,0.00020468904,0.00045800614,0.000035791854,0.00005822822,0.00007037981,0.00011603386,0.00020854342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008094986,0.0008216372,0.22084537,0.00016018095,0.00020241646,0.033643972,0.00022202126,0.000031429416,0.7331637,0.00000803532,0.00025131291,0.01056896],"study_design_scores_gemma":[0.01034423,0.00045732743,0.45768028,0.0010476026,0.0012911165,0.007859581,0.00020129143,0.00023595472,0.5078583,0.000062248044,0.011798744,0.0011633536],"about_ca_topic_score_codex":0.0004343609,"about_ca_topic_score_gemma":0.00018036246,"teacher_disagreement_score":0.23683493,"about_ca_system_score_codex":0.00029111878,"about_ca_system_score_gemma":0.0004000408,"threshold_uncertainty_score":0.99999297},"labels":[],"label_agreement":null},{"id":"W3202055550","doi":"10.22374/jeleu.v4i2.121","title":"Identifying Silent Fungal Infections Complicating Obstructive Uropathy Due to Renal Papillary Necrosis in Diabetic Patients –A Step Towards Preventing Recurrent Obstructive Uropathy","year":2021,"lang":"en","type":"article","venue":"Journal of Endoluminal Endourology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Obstructive uropathy; Medicine; Renal papillary necrosis; Necrosis; Urology; Internal medicine; Urinary system; Kidney","score_opus":0.01724815532267497,"score_gpt":0.2827841809413405,"score_spread":0.2655360256186655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202055550","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9951714,0.0009320654,0.0005723915,0.00014587697,0.001411473,0.00050836673,0.000038472204,0.000025437013,0.0011945133],"genre_scores_gemma":[0.9967469,0.00008916647,0.00240661,0.00019802006,0.0003855804,0.000053099175,0.00003666395,0.000044236578,0.000039751656],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9964226,0.00048424452,0.0013547098,0.000529525,0.0005700828,0.0006388302],"domain_scores_gemma":[0.9968069,0.00024175993,0.0010254264,0.00032460364,0.0011284014,0.00047289685],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00044351778,0.00036350524,0.0009611306,0.00054137787,0.00023546812,0.00006298297,0.00011347445,0.0001403598,0.000120567565],"category_scores_gemma":[0.0013489568,0.00034411706,0.00047491814,0.0005936418,0.000103175196,0.0002252322,0.00020644513,0.00084695575,0.000012639374],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009449528,0.0035312457,0.88375956,0.00022912523,0.0008646996,0.022856709,0.001413181,0.00022005223,0.006754547,0.00011549662,0.000082757804,0.07922765],"study_design_scores_gemma":[0.004424114,0.0026539483,0.9656607,0.0005286324,0.0008262471,0.020169092,0.0004314438,0.00007625092,0.004165423,0.00029435055,0.0004793653,0.00029041682],"about_ca_topic_score_codex":0.00007354371,"about_ca_topic_score_gemma":0.000046075926,"teacher_disagreement_score":0.08190113,"about_ca_system_score_codex":0.00061222754,"about_ca_system_score_gemma":0.00048782423,"threshold_uncertainty_score":0.99990106},"labels":[],"label_agreement":null},{"id":"W4212911079","doi":"10.1093/jcag/gwac008","title":"Pyeloduodenal Fistula in Xanthogranulomatous Pyelonephritis","year":2022,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Xanthogranulomatous pyelonephritis; Fistula; Medicine; Radiology; Internal medicine; Nephrectomy; Kidney","score_opus":0.005471129428179009,"score_gpt":0.21968953678051972,"score_spread":0.2142184073523407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212911079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926566,0.000035707388,0.0000017215659,0.0061218888,0.00049724506,0.00012197396,0.00003886781,0.0000020130656,0.00052401074],"genre_scores_gemma":[0.9984302,0.00001109753,0.000026171794,0.0011985715,0.00005481833,0.0000051875145,0.0000045849038,0.000008416233,0.00026095216],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986882,0.00022654272,0.000440562,0.0000678625,0.00034726836,0.00022956842],"domain_scores_gemma":[0.9988017,0.000025200367,0.00075944525,0.00010468409,0.00015655528,0.00015239637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059796276,0.00006745477,0.00029809208,0.0003180495,0.00012805902,0.0000059827935,0.000081674065,0.00004093171,0.00016109718],"category_scores_gemma":[0.00014811583,0.000055238743,0.00021473036,0.00014255485,0.00002695546,0.000029918227,0.000025628426,0.000300427,6.1728565e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020020363,0.00014042149,0.99519104,0.000006916249,0.00018770328,0.00075245654,0.00008601885,0.00012229879,0.000044744826,0.000020988955,0.0030922599,0.00015497414],"study_design_scores_gemma":[0.002626486,0.0007074757,0.98926085,0.000023209996,0.00012561982,0.003555828,0.000057686382,0.00001511769,0.000016113378,0.000088425964,0.0034979065,0.000025253019],"about_ca_topic_score_codex":0.0067449785,"about_ca_topic_score_gemma":0.17199872,"teacher_disagreement_score":0.16525376,"about_ca_system_score_codex":0.0022863997,"about_ca_system_score_gemma":0.00063277956,"threshold_uncertainty_score":0.99986917},"labels":[],"label_agreement":null},{"id":"W4214696294","doi":"10.14740/jmc3874","title":"Emphysematous Cystitis: An Unusual Cause of Septic Shock","year":2022,"lang":"en","type":"article","venue":"Journal of Medical Cases","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Decompensation; Septic shock; Cardiac decompensation; Shock (circulatory); Disease; Surgery; Cardiology; Internal medicine; Heart failure; Sepsis","score_opus":0.029325721676376072,"score_gpt":0.33963818356605313,"score_spread":0.31031246188967704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214696294","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973808,0.0012087629,0.000022928058,0.00039121372,0.0004134922,0.00010303406,0.000024621868,0.000012943125,0.00044222534],"genre_scores_gemma":[0.99900544,0.000093917566,0.00003766961,0.00039559958,0.00032775034,0.000005576852,0.000012818826,0.000016875278,0.0001043832],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9973434,0.00010245387,0.0005879049,0.00010506046,0.0017018699,0.00015931048],"domain_scores_gemma":[0.99859375,0.00011548347,0.0003828014,0.00016359257,0.00018661065,0.0005577542],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00047593995,0.000106863314,0.0004210871,0.00016563834,0.00009632037,0.000007816794,0.00007925607,0.000052334584,0.0026220235],"category_scores_gemma":[0.0005405003,0.00007791794,0.00021530617,0.00014650608,0.00008131252,0.00007232642,0.000054537777,0.000322627,0.000002863932],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013745525,0.008956343,0.12089357,0.00044666632,0.0016882096,0.8384509,0.0006903499,0.00009341811,0.0003084194,0.000398093,0.013268034,0.01343144],"study_design_scores_gemma":[0.009057505,0.016809493,0.050742052,0.00065896247,0.0027704732,0.90625054,0.0026165987,0.0002856876,0.001152,0.00027978618,0.00908738,0.0002895114],"about_ca_topic_score_codex":0.00009212925,"about_ca_topic_score_gemma":0.000010159343,"teacher_disagreement_score":0.07015151,"about_ca_system_score_codex":0.00014177273,"about_ca_system_score_gemma":0.0009276017,"threshold_uncertainty_score":0.9982897},"labels":[],"label_agreement":null},{"id":"W4223435748","doi":"10.1186/s12876-022-02253-6","title":"Emphysematous cystitis as a potential marker of severe Crohn's disease","year":2022,"lang":"en","type":"article","venue":"BMC Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stornoway Diamond (Canada); University of British Columbia; Health Sciences Centre; Memorial University of Newfoundland","funders":"","keywords":"Medicine; Pancolitis; Internal medicine; Gastroenterology; Colonoscopy; Crohn's disease; Mesalazine; Colitis; Ulcerative colitis; Inflammatory bowel disease; Cystoscopy; Urinary system; Disease; Colorectal cancer","score_opus":0.007052579514835663,"score_gpt":0.23978201362369592,"score_spread":0.23272943410886027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4223435748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99759525,0.00012753932,0.00014639122,0.00014604379,0.00035128355,0.00041984086,0.0001146548,0.000049982962,0.0010490342],"genre_scores_gemma":[0.99799675,0.000007246466,0.0001242216,0.0006451538,0.000069952315,0.0001516031,0.00013479502,0.00002690382,0.00084340177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99868935,0.00012665952,0.00028950494,0.00029863798,0.00027837048,0.00031748088],"domain_scores_gemma":[0.9991629,0.0000127469175,0.00016230061,0.00033890438,0.000069793285,0.00025336893],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00007690113,0.00015520833,0.00032443771,0.00012436903,0.00012707393,0.0000055728624,0.00005473723,0.000026474389,0.0023561735],"category_scores_gemma":[0.00003453927,0.00014695598,0.0002644076,0.00006867503,0.00008300604,0.000030936015,0.00014600875,0.000118876895,0.000020125732],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060344525,0.0012654638,0.9695844,0.0001358174,0.0002755915,0.020717831,0.000028015484,0.00026497385,0.000099141216,0.00006019683,0.0013740999,0.00015999448],"study_design_scores_gemma":[0.0034091522,0.0013218209,0.9823711,0.000017581955,0.00049015693,0.0114122145,0.000057589088,0.00008816379,0.00000828378,0.0001648137,0.0005934926,0.00006563712],"about_ca_topic_score_codex":0.000089483205,"about_ca_topic_score_gemma":0.0000105797535,"teacher_disagreement_score":0.0127866715,"about_ca_system_score_codex":0.00009912655,"about_ca_system_score_gemma":0.00019577224,"threshold_uncertainty_score":0.9985558},"labels":[],"label_agreement":null},{"id":"W4230035266","doi":"10.14740/cii41w","title":"Emphysematous Pyelonephritis: A Correlation of Clinical Characteristics With Serum Parameters and Its Contribution in Determination of Prognostic Factors","year":2018,"lang":"en","type":"article","venue":"Clinical Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Correlation; Medicine; Internal medicine; Mathematics","score_opus":0.05119834287137456,"score_gpt":0.38195959209572633,"score_spread":0.3307612492243518,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230035266","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9987,0.00004585099,0.00040486403,0.000012888796,0.00020877611,0.00052257365,0.000017552391,0.00002020577,0.00006725438],"genre_scores_gemma":[0.9994613,0.00034637834,0.000048259364,0.000026296262,0.000032545802,0.000009332909,0.000060475417,0.000008077172,0.000007319091],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984873,0.00022769839,0.00091004954,0.00016864043,0.00010438621,0.00010193584],"domain_scores_gemma":[0.9983592,0.00045007016,0.0005289205,0.00012452174,0.0004330278,0.00010426172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006267174,0.00010993215,0.0005046655,0.000095859374,0.000063979845,0.000008413713,0.0000109725315,0.00017492009,0.000011965613],"category_scores_gemma":[0.002006325,0.00008517006,0.000076695396,0.00014295247,0.0003119218,0.00011104719,0.000021344007,0.00021937898,0.0000010729943],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039239062,0.0009046622,0.97890407,0.00010397581,0.0000647147,0.000012038081,0.0000722521,1.1249473e-7,0.00004191911,0.00003554563,8.8331694e-7,0.019467419],"study_design_scores_gemma":[0.002678459,0.0037115256,0.9906341,0.000360028,0.00024749115,0.00008817681,0.000022442473,0.0016869616,0.00042590563,0.000059173333,0.000011339512,0.00007440762],"about_ca_topic_score_codex":0.00016663707,"about_ca_topic_score_gemma":0.00006801917,"teacher_disagreement_score":0.019393012,"about_ca_system_score_codex":0.000020923315,"about_ca_system_score_gemma":0.0000797774,"threshold_uncertainty_score":0.3473134},"labels":[],"label_agreement":null},{"id":"W4237436225","doi":"10.4321/s0210-48062008000800016","title":"Sepsis urológica secundaria a cistitis enfisematosa","year":2008,"lang":"es","type":"article","venue":"Actas Urológicas Españolas","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cytodiagnostics (Canada)","funders":"","keywords":"Sepsis; Medicine; Internal medicine","score_opus":0.01702826274919726,"score_gpt":0.2681283515003145,"score_spread":0.2511000887511172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237436225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84410423,0.00509603,0.00007249411,0.0013439249,0.0015022402,0.0014893068,0.00048478242,0.0005522809,0.1453547],"genre_scores_gemma":[0.98648185,0.00410704,0.00026482993,0.001741529,0.0013331143,0.00015877458,0.00037986482,0.00024678902,0.0052862028],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99379677,0.00029216288,0.0013446189,0.0015887563,0.0014034694,0.0015741992],"domain_scores_gemma":[0.995157,0.0003379446,0.00071605376,0.0017856421,0.000475668,0.0015276916],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0003139881,0.0012355132,0.001618468,0.0005383261,0.0013563668,0.00026715666,0.00029696076,0.0006636965,0.0071177892],"category_scores_gemma":[0.00051283976,0.0011062177,0.0010904536,0.0008928195,0.00070404715,0.00036885715,0.00025814385,0.00087221444,0.0040527773],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021180722,0.008617131,0.6798179,0.0011738173,0.007763835,0.21525684,0.0024108232,0.000038970833,0.0012163088,0.0075968863,0.06531778,0.008671606],"study_design_scores_gemma":[0.009345504,0.0022400434,0.3083402,0.00070013665,0.0048855674,0.035382446,0.00010225878,0.00033876975,0.0016442626,0.00050457614,0.6346725,0.0018437497],"about_ca_topic_score_codex":0.00045247583,"about_ca_topic_score_gemma":0.000012635658,"teacher_disagreement_score":0.5693547,"about_ca_system_score_codex":0.0004779177,"about_ca_system_score_gemma":0.0012437139,"threshold_uncertainty_score":0.99994373},"labels":[],"label_agreement":null},{"id":"W4237957351","doi":"10.5489/cuaj.2913","title":"Correction 2","year":2015,"lang":"en","type":"erratum","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Computer science","score_opus":0.01313406675890943,"score_gpt":0.24386997592238296,"score_spread":0.23073590916347353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237957351","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021726915,0.0023697356,0.0000089094265,0.008725111,0.10400306,0.00039355224,0.00011949167,0.00009947515,0.882108],"genre_scores_gemma":[0.07021366,0.0006216293,0.000018101877,0.005378512,0.012002082,0.000018896993,0.0013462221,0.000060050734,0.91034085],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980961,0.00011365124,0.0003931705,0.00024416108,0.00062400405,0.0005288867],"domain_scores_gemma":[0.99645615,0.00003738766,0.00055651745,0.00014292414,0.0010088217,0.0017981828],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005197052,0.00024344632,0.000481314,0.00032768218,0.00029166776,0.00013178829,0.000053012107,0.0011028575,0.0016440602],"category_scores_gemma":[0.0016142825,0.00019172872,0.00031551646,0.00017795294,0.000020214398,0.00006021667,0.000009617687,0.0019751189,0.00034111764],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.000018103307,0.00006223063,0.07080953,0.000004811918,0.00034183965,0.002432363,0.000013300286,0.0000024299727,1.3250914e-7,0.0000055283563,0.9239323,0.0023774235],"study_design_scores_gemma":[0.00056091143,0.00032957082,0.08271387,0.00004408865,0.00052649796,0.0047337385,0.000010231255,0.00007047391,2.4424054e-7,0.00025837024,0.9105959,0.00015611679],"about_ca_topic_score_codex":0.0020116528,"about_ca_topic_score_gemma":0.0010163761,"teacher_disagreement_score":0.09200097,"about_ca_system_score_codex":0.007415087,"about_ca_system_score_gemma":0.0059813005,"threshold_uncertainty_score":0.9996539},"labels":[],"label_agreement":null},{"id":"W4239119164","doi":"10.5489/cuaj.967","title":"Emphysematous pyelitis, ureteritis and cystitis","year":2013,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Queen's University","funders":"","keywords":"Urology; Medicine","score_opus":0.0050954292555504075,"score_gpt":0.201858402179441,"score_spread":0.1967629729238906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239119164","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98327374,0.00046632616,0.000009551062,0.0077567124,0.00019216811,0.00019339372,0.000022883083,0.000026519332,0.008058714],"genre_scores_gemma":[0.99556625,0.00015013013,0.000073166404,0.003333453,0.00026791144,0.000016424778,0.000018428145,0.000008975902,0.0005652641],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99912065,0.00004569074,0.00020242122,0.00012806135,0.00017583033,0.00032736984],"domain_scores_gemma":[0.99860555,0.00003272592,0.00011610424,0.000060312806,0.00022526918,0.00096002145],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001115674,0.000096029566,0.00018580066,0.000089568784,0.00019996113,0.00013978392,0.00001967898,0.00013656789,0.0019819755],"category_scores_gemma":[0.00024911392,0.00007610188,0.0000786908,0.00006510827,0.000024115057,0.00010052033,0.0000064760698,0.0002086581,0.00012447027],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000041922385,0.000031963482,0.97515637,0.0000049426853,0.00012916497,0.0017958827,0.00002713683,4.4289447e-7,0.00002918125,0.0001485369,0.0128495,0.009822694],"study_design_scores_gemma":[0.00060631166,0.0002068626,0.96144944,0.000013209328,0.00007575454,0.008580032,0.000015667381,0.000020810821,0.0000041084027,0.0013871077,0.027559115,0.000081552476],"about_ca_topic_score_codex":0.003806442,"about_ca_topic_score_gemma":0.00023536388,"teacher_disagreement_score":0.014709614,"about_ca_system_score_codex":0.0005332252,"about_ca_system_score_gemma":0.00023209146,"threshold_uncertainty_score":0.99893034},"labels":[],"label_agreement":null},{"id":"W4241322650","doi":"10.1051/vetres:2004024","title":"<i>Rhodococcus equi</i>","year":2004,"lang":"yi","type":"review","venue":"Veterinary Research","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhodococcus equi; Biology; Microbiology; Rhodococcus; Bacteria; Genetics; Virulence","score_opus":0.4606180970793392,"score_gpt":0.5545442730891321,"score_spread":0.09392617600979292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241322650","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0037346,0.9108232,0.000005095862,0.00010449162,0.0013247277,0.0047098957,0.00027067002,0.00016259027,0.07886468],"genre_scores_gemma":[0.017075222,0.96083045,0.00005963035,0.00006437111,0.0016487649,0.0011328779,0.0007927897,0.0003284312,0.01806746],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98990357,0.0015069848,0.0014906962,0.0018649244,0.0025932542,0.0026405456],"domain_scores_gemma":[0.99410474,0.00064122095,0.00038612972,0.0023892536,0.0009678672,0.0015107836],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0028353299,0.0011893732,0.0028371743,0.00136278,0.0009793341,0.0002934622,0.00052685494,0.0009421453,0.005989474],"category_scores_gemma":[0.00050009164,0.000944413,0.0015153516,0.001842456,0.0008195122,0.00018847149,0.0010187797,0.002823461,0.014313926],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006034053,0.0044939965,0.00029831813,0.12886982,0.003152748,0.26052183,0.00018020709,0.0000014719525,0.00006853698,0.00051021617,0.0044425773,0.5968569],"study_design_scores_gemma":[0.0019665048,0.008636924,0.00012478576,0.04913505,0.0014265587,0.017819393,0.00004872481,0.0000025390063,0.000008467039,0.00018797301,0.9199385,0.00070458325],"about_ca_topic_score_codex":0.00056410785,"about_ca_topic_score_gemma":0.000002277991,"teacher_disagreement_score":0.91549593,"about_ca_system_score_codex":0.0034789618,"about_ca_system_score_gemma":0.0068946183,"threshold_uncertainty_score":0.9994771},"labels":[],"label_agreement":null},{"id":"W4241354811","doi":"10.1503/cmaj.091055","title":"Emphysematous pyelitis","year":2010,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Oliguria; Renal function; Creatinine; Medicine; Emergency department; Nephropathy; Urology; Internal medicine; Endocrinology; Diabetes mellitus","score_opus":0.0036114140175161078,"score_gpt":0.23733833794218281,"score_spread":0.2337269239246667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241354811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9415422,0.0000641779,0.000009182519,0.012735418,0.0017034464,0.00010363826,0.000013995558,0.000030803047,0.043797113],"genre_scores_gemma":[0.9898388,0.000036848836,0.000057843805,0.006709764,0.002052628,0.0000048981847,0.000013635708,0.000014769152,0.0012708042],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99836266,0.000026724809,0.00026138645,0.00010451212,0.000896023,0.00034867937],"domain_scores_gemma":[0.99668956,0.00003791791,0.000119427365,0.000101433405,0.00039123363,0.002660451],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00049940636,0.00008718172,0.00017058844,0.00012871949,0.00019312551,0.000058741385,0.000041484094,0.00028344465,0.012404222],"category_scores_gemma":[0.0012080309,0.000071932845,0.00013188008,0.00010992179,0.000024289067,0.00005947214,0.0000046612736,0.00085777376,0.0003637014],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008762464,0.00014917318,0.76690316,0.000012677144,0.00039368254,0.02726198,0.00009995498,1.5765976e-7,0.000068434085,0.0008406079,0.120074734,0.08418664],"study_design_scores_gemma":[0.0014393826,0.00007092774,0.28289825,0.000045377856,0.00010940916,0.02863496,0.000046937985,0.00003315271,0.00004170729,0.00031007032,0.6862499,0.000119911834],"about_ca_topic_score_codex":0.0020199986,"about_ca_topic_score_gemma":0.016346153,"teacher_disagreement_score":0.56617516,"about_ca_system_score_codex":0.00048523518,"about_ca_system_score_gemma":0.004036032,"threshold_uncertainty_score":0.98849857},"labels":[],"label_agreement":null},{"id":"W4242757905","doi":"10.1016/j.jaad.2004.10.245","title":"Recalcitrant necrobiotic xanthogranuloma responding to infliximab","year":2005,"lang":"en","type":"article","venue":"Journal of the American Academy of Dermatology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Infliximab; Dermatology; Immunology; Tumor necrosis factor alpha","score_opus":0.013553684042769987,"score_gpt":0.32882269802027747,"score_spread":0.3152690139775075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242757905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96857226,0.00034902556,0.00006470728,0.030088438,0.00009558934,0.00017418024,0.0000038521057,0.000009869857,0.000642079],"genre_scores_gemma":[0.99435556,0.00009162923,0.0014243317,0.003886972,0.00011762573,0.0000017001512,2.9192842e-7,0.00001653156,0.00010535604],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99855787,0.000119476776,0.00070507696,0.00011465878,0.00025664395,0.000246301],"domain_scores_gemma":[0.99845093,0.00009301488,0.0010225761,0.00014000945,0.00008149796,0.00021196611],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014763532,0.00013548514,0.0006757887,0.0005571086,0.00006486487,0.000005775441,0.00014529272,0.000060140508,0.000030569256],"category_scores_gemma":[0.00016172837,0.00008258127,0.00035291142,0.0006668129,0.00025462374,0.000068159374,0.000046152218,0.00033649075,0.000011742706],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007834439,0.0024175404,0.6901511,0.0002804126,0.0033801803,0.004232082,0.0016659282,0.00040796446,0.1775148,0.0016872429,0.017327067,0.09310126],"study_design_scores_gemma":[0.005143949,0.0010964044,0.5087339,0.00069682446,0.0017463579,0.25441042,0.00028105572,0.00010177805,0.12025432,0.00026234362,0.10693567,0.00033691392],"about_ca_topic_score_codex":0.0000056060226,"about_ca_topic_score_gemma":5.141052e-7,"teacher_disagreement_score":0.25017834,"about_ca_system_score_codex":0.0000991465,"about_ca_system_score_gemma":0.00012201793,"threshold_uncertainty_score":0.33675665},"labels":[],"label_agreement":null},{"id":"W4247315806","doi":"10.5858/133.6.850.b","title":"Notice of Retraction: Omission of Author in “Malakoplakia Outside the Urinary Tract” (Arch Pathol Lab Med. 2007;131(2):297–300)","year":2009,"lang":"en","type":"erratum","venue":"Archives of Pathology & Laboratory Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Malakoplakia; Medicine; Urinary system; Pathology; Internal medicine","score_opus":0.015874791217156698,"score_gpt":0.3098575178748562,"score_spread":0.29398272665769953,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247315806","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7757497,0.057398666,0.00009357643,0.0077395956,0.020818532,0.0044430248,0.0013222913,0.00017929864,0.1322553],"genre_scores_gemma":[0.9654147,0.009926698,0.0007383401,0.0007604363,0.0025677336,0.00010354196,0.0013836605,0.00016830243,0.018936614],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99481004,0.0008383295,0.0020452638,0.0008020679,0.0009366361,0.0005676594],"domain_scores_gemma":[0.99488825,0.00085221534,0.0019879544,0.0014013236,0.000546304,0.00032394283],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013875462,0.0006785423,0.0023192281,0.0009877002,0.000111550515,0.0000031323013,0.00029952283,0.0008793105,0.00031318475],"category_scores_gemma":[0.0016546866,0.0004503516,0.00034092183,0.00069054443,0.0018288995,0.000103441314,0.00010921395,0.0021271957,0.0000053345657],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012175244,0.030867675,0.19785751,0.015659291,0.0029746678,0.21154326,0.026570098,0.000057903893,0.07160624,0.0017506635,0.39179817,0.03713926],"study_design_scores_gemma":[0.0087206615,0.010990154,0.83793193,0.010441003,0.0039174496,0.0071191997,0.0018989174,0.00007426856,0.0020328504,0.00058250036,0.11559089,0.000700184],"about_ca_topic_score_codex":0.00014782857,"about_ca_topic_score_gemma":0.000033912806,"teacher_disagreement_score":0.6400744,"about_ca_system_score_codex":0.000110745044,"about_ca_system_score_gemma":0.0017753218,"threshold_uncertainty_score":0.99979484},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"editorial","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":[],"domain":null,"study_design":"not_applicable","genre":"editorial","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"agree"},{"id":"W4247336229","doi":"10.1503/cmaj.191288","title":"Emphysematous cystitis","year":2020,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Dysuria; Medicine; Blood pressure; Diabetes mellitus; Kidney disease; Physical examination; Glycosuria; Emergency department; Abdominal pain; Surgery; Internal medicine; Urinary system; Endocrinology; Nursing","score_opus":0.007626754004535465,"score_gpt":0.2342086332601705,"score_spread":0.22658187925563503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247336229","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7810822,0.000543836,0.00013300634,0.14975345,0.0010515697,0.00027282763,0.000044724693,0.00009112282,0.06702727],"genre_scores_gemma":[0.96194315,0.000069866495,0.000033896926,0.035898026,0.0017293707,0.000003107922,0.000013814775,0.000013218903,0.00029555755],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99845886,0.000036043624,0.00025249823,0.000106820415,0.0008610634,0.00028472717],"domain_scores_gemma":[0.99589765,0.000025062334,0.00011053942,0.000050849685,0.00026609012,0.003649788],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00021171762,0.000081769555,0.0001865343,0.00006001623,0.00016570023,0.000045748206,0.000036352132,0.0001687677,0.0073239957],"category_scores_gemma":[0.0011707202,0.000069253234,0.00012402337,0.00013978302,0.000013947278,0.00005239046,0.0000051275238,0.00041208582,0.00050120073],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021563366,0.00009413069,0.54444295,0.00003203773,0.0006190307,0.06484783,0.00030789836,0.0000019179029,0.000013536637,0.0002779917,0.34960407,0.039737016],"study_design_scores_gemma":[0.002420824,0.0002411925,0.09462208,0.000093409384,0.00019671624,0.014102771,0.00012759469,0.00021434251,0.000031816286,0.000089930574,0.88769686,0.0001624343],"about_ca_topic_score_codex":0.00081750046,"about_ca_topic_score_gemma":0.0011579042,"teacher_disagreement_score":0.5380928,"about_ca_system_score_codex":0.00068345305,"about_ca_system_score_gemma":0.003357856,"threshold_uncertainty_score":0.99358344},"labels":[],"label_agreement":null},{"id":"W4253320792","doi":"10.5489/cuaj.740","title":"Emphysematous pyelonephritis with complete duplication of the left urinary tract","year":2013,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Nephrectomy; Urinary system; Ureter; Abdominal pain; Surgery; Pelvis; Renal pelvis; Renal colic; Parenchyma; Radiology; Kidney; Internal medicine; Pathology","score_opus":0.008705650031564075,"score_gpt":0.20741701511067567,"score_spread":0.1987113650791116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253320792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880058,0.000092898634,0.000015347436,0.00849674,0.00007505711,0.00031639513,0.000019614716,0.000012261935,0.0029658892],"genre_scores_gemma":[0.9980869,0.000019959241,0.00005058317,0.0014140648,0.00009615235,0.00001133072,0.000012878324,0.000008482443,0.0002996177],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990935,0.00006583127,0.00023713613,0.00010479181,0.00026538398,0.00023336482],"domain_scores_gemma":[0.9988026,0.000043846805,0.00031564222,0.00012355347,0.00035430116,0.00036003947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012286549,0.000090125955,0.0001830129,0.00006265555,0.00022899905,0.000036807243,0.000048444203,0.000095162795,0.0007547771],"category_scores_gemma":[0.0001167852,0.00005103155,0.00011681455,0.00010263816,0.000037910708,0.00007675422,0.0000061701644,0.00023571728,0.000034798406],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009978108,0.00018656044,0.99683523,0.0000050290623,0.00011117863,0.00017810146,0.000041647094,0.000011136,0.00006958271,0.000070805036,0.0015878337,0.0008929191],"study_design_scores_gemma":[0.00058676646,0.00037125524,0.9866947,0.000019240184,0.00010469195,0.0065705185,0.000015432965,0.000045487348,0.00001534633,0.00039109582,0.0051295334,0.000055962497],"about_ca_topic_score_codex":0.0019090268,"about_ca_topic_score_gemma":0.00016864818,"teacher_disagreement_score":0.01014056,"about_ca_system_score_codex":0.0004903026,"about_ca_system_score_gemma":0.00038627887,"threshold_uncertainty_score":0.82642806},"labels":[],"label_agreement":null},{"id":"W4254675116","doi":"10.1001/archpediatrics.2009.126-b","title":"Picture of the Month—Diagnosis","year":2009,"lang":"en","type":"article","venue":"Archives of Pediatrics and Adolescent Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Western Ontario; Western University","funders":"","keywords":"Medicine","score_opus":0.008489279076121086,"score_gpt":0.24815041252822634,"score_spread":0.23966113345210524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254675116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9851236,0.0061069303,0.000048034377,0.0029971597,0.00013287179,0.0003705273,0.000012999097,0.000012199632,0.0051957187],"genre_scores_gemma":[0.99470013,0.004235265,0.0000647554,0.0005982213,0.00025507834,0.000002367032,0.000007815034,0.0000061022124,0.00013027206],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99921256,0.000017431727,0.00027823367,0.00013914974,0.00023082986,0.00012177641],"domain_scores_gemma":[0.99936473,0.000059932154,0.00017976243,0.00022747037,0.000042451255,0.00012564934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000049197133,0.000112895024,0.0002919839,0.00010216906,0.000043595737,0.000001429854,0.00004267233,0.00003103068,0.000019507726],"category_scores_gemma":[0.000113003254,0.000059770042,0.00010303057,0.00014250026,0.00016152683,0.0000138984005,0.00002407529,0.00010289585,2.0179671e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012654717,0.00080600695,0.9563798,0.00052384386,0.000036223904,0.0000617996,0.00039860685,0.0000030226233,0.00068571314,0.00048251209,0.0019056065,0.038590357],"study_design_scores_gemma":[0.0019331195,0.0006928002,0.9933073,0.0004382792,0.00060700695,0.000055795834,0.00007142073,0.00002076551,0.00078949175,0.0010598822,0.0009645577,0.00005957646],"about_ca_topic_score_codex":0.000012003642,"about_ca_topic_score_gemma":7.820823e-7,"teacher_disagreement_score":0.038530782,"about_ca_system_score_codex":0.0000063396487,"about_ca_system_score_gemma":0.00004906854,"threshold_uncertainty_score":0.24373515},"labels":[],"label_agreement":null},{"id":"W4293115831","doi":"10.22374/jeleu.v5i2.151","title":"Bladder Xanthoma","year":2022,"lang":"en","type":"article","venue":"Journal of Endoluminal Endourology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Xanthoma; Cystoscopy; Medicine; Histopathology; Differential diagnosis; Lesion; Pathology; Radiology","score_opus":0.009046089029949524,"score_gpt":0.2579607389872844,"score_spread":0.24891464995733487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293115831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98682517,0.00090063456,0.00006418983,0.0008387381,0.0008195824,0.00011406922,0.0000074543677,0.000014335496,0.010415808],"genre_scores_gemma":[0.99778,0.0000337819,0.00020854047,0.000849909,0.00036327748,0.000010266901,0.000005426646,0.000017616716,0.00073113345],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99878544,0.00010673713,0.0004120068,0.00011666213,0.0003528678,0.00022629873],"domain_scores_gemma":[0.99906117,0.000065941684,0.00039684502,0.00014380911,0.00015168081,0.00018056003],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00029365602,0.00010606767,0.00034663134,0.00023256708,0.00015755427,0.0000065728823,0.00006012865,0.000031692594,0.0024917866],"category_scores_gemma":[0.00009414235,0.000087382046,0.0002821223,0.00012024861,0.000060533534,0.000047778238,0.000057100697,0.0004093221,0.0000109769835],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011892485,0.009099372,0.43995318,0.00011701344,0.005097945,0.43818867,0.0008638442,0.00063152355,0.015609717,0.003217259,0.04116416,0.034164824],"study_design_scores_gemma":[0.009227075,0.012269755,0.09144978,0.000012539959,0.0015869492,0.5989254,0.00039696577,0.000074399264,0.001033988,0.00063986395,0.2841855,0.00019776965],"about_ca_topic_score_codex":0.0000122135,"about_ca_topic_score_gemma":0.0000010058709,"teacher_disagreement_score":0.3485034,"about_ca_system_score_codex":0.00011833227,"about_ca_system_score_gemma":0.0003002473,"threshold_uncertainty_score":0.99842006},"labels":[],"label_agreement":null},{"id":"W4312290730","doi":"10.48083/qfcw5582","title":"Malakoplakia Causing Poor Bladder Compliance and Bilateral Hydroureteronephrosis","year":2022,"lang":"fr","type":"article","venue":"Société Internationale d’Urologie Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Malakoplakia; Compliance (psychology); Medicine; Malacoplakia; Urology; Pathology; Psychology; Social psychology","score_opus":0.05382405408460215,"score_gpt":0.3292137496837173,"score_spread":0.27538969559911514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312290730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9463174,0.025184998,0.00022609634,0.012076057,0.009899361,0.00036574472,0.0002929163,0.00005774077,0.005579715],"genre_scores_gemma":[0.97667915,0.0020013126,0.0002488067,0.0035697632,0.0017334264,0.000048273752,0.0001104825,0.0000422028,0.0155666135],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99720955,0.00027719466,0.0006503498,0.00043353272,0.0007726937,0.0006567042],"domain_scores_gemma":[0.99845856,0.00018328475,0.00055521034,0.00019012672,0.0002564146,0.00035637576],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00058019895,0.00034712348,0.00043354408,0.00022621443,0.0011469636,0.00020811032,0.00012832382,0.00013042061,0.01058458],"category_scores_gemma":[0.0001320611,0.00033935613,0.0003279865,0.00014542033,0.0002817406,0.0003177975,0.00032845148,0.001147596,0.000033647855],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001428684,0.003416387,0.8166938,0.00027184837,0.008787898,0.054543782,0.0017220333,0.002954832,0.001811699,0.0022938012,0.03682623,0.06924905],"study_design_scores_gemma":[0.014017962,0.003643186,0.35146075,0.0006031785,0.0031886997,0.23708619,0.0020666304,0.019054921,0.00028479286,0.008036223,0.35924292,0.001314534],"about_ca_topic_score_codex":0.00010263308,"about_ca_topic_score_gemma":0.000007867747,"teacher_disagreement_score":0.465233,"about_ca_system_score_codex":0.0013154832,"about_ca_system_score_gemma":0.0004130013,"threshold_uncertainty_score":0.9999058},"labels":[],"label_agreement":null},{"id":"W4312919195","doi":"10.22374/cjgim.v17i3.605","title":"Xanthogranulomatous Pyelonephritis Presenting as Bilateral Enlarged Kidneys","year":2022,"lang":"fr","type":"article","venue":"Canadian Journal of General Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia; University of British Columbia","funders":"","keywords":"Dysuria; Medicine; Flank pain; Proteus mirabilis; Gross hematuria; Xanthogranulomatous pyelonephritis; Urology; Kidney; Surgery; Urinary system; Internal medicine; Bacteria","score_opus":0.012609108451021681,"score_gpt":0.2739647560544643,"score_spread":0.2613556476034426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312919195","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8558965,0.08185078,0.0000531819,0.011169037,0.028522968,0.00042281044,0.00026836025,0.000017997154,0.02179838],"genre_scores_gemma":[0.94237596,0.0009271361,0.00011592358,0.0034399857,0.008421353,0.000018012024,0.00008681504,0.00009599119,0.044518813],"study_design_codex":"case_report","study_design_gemma":"not_applicable","domain_scores_codex":[0.99543476,0.00042450702,0.0015573449,0.00037759336,0.0009970564,0.0012087298],"domain_scores_gemma":[0.99411416,0.00008868531,0.000957339,0.00035464592,0.0005199625,0.0039652153],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010326025,0.00047491025,0.0010432719,0.0011816929,0.0007083367,0.00008079006,0.00033749372,0.00013862706,0.029058577],"category_scores_gemma":[0.0005959028,0.00042275005,0.000532468,0.0004960483,0.0005134793,0.00023480266,0.000081292696,0.0013431619,0.00005559564],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040357964,0.00041223812,0.20443772,0.00031782218,0.0028451823,0.50285,0.0026421074,0.0002733973,0.0016427806,0.0012446822,0.25309804,0.029832441],"study_design_scores_gemma":[0.007881498,0.005373432,0.020035543,0.002809446,0.0022369635,0.31135064,0.0013300425,0.0005514908,0.00068416126,0.0010702455,0.6461446,0.0005319321],"about_ca_topic_score_codex":0.15568492,"about_ca_topic_score_gemma":0.004876003,"teacher_disagreement_score":0.39304656,"about_ca_system_score_codex":0.0017521925,"about_ca_system_score_gemma":0.004346867,"threshold_uncertainty_score":0.99982244},"labels":[],"label_agreement":null},{"id":"W4321749377","doi":"10.1111/jvim.16647","title":"Effect of plasma transfusion on serum amyloid A concentration in healthy neonatal foals and foals with failure of transfer of passive immunity","year":2023,"lang":"en","type":"article","venue":"Journal of Veterinary Internal Medicine","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Zoetis; American College of Veterinary Internal Medicine","keywords":"Medicine; Serum amyloid A; Passive immunity; Horse; Internal medicine; Antibody; Prospective cohort study; Immunity; Foal; Immunology; Inflammation; Gastroenterology; Immune system","score_opus":0.013534483821832009,"score_gpt":0.3086004797790047,"score_spread":0.29506599595717264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321749377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9984606,0.00027245047,0.000056034456,0.00051313016,0.0001510966,0.0004070208,0.000029676998,0.000005294303,0.00010467879],"genre_scores_gemma":[0.99920654,0.00063961995,0.000016923617,0.000033296696,0.0000645344,0.000005141621,0.000010740573,0.000014553041,0.000008662451],"study_design_codex":"bench_or_experimental","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9982662,0.00017022339,0.0008458532,0.000117212985,0.0004538312,0.0001466714],"domain_scores_gemma":[0.998833,0.00028787425,0.0004135905,0.0001198212,0.00020479652,0.00014091926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049341907,0.00017128675,0.0008302701,0.00032544538,0.000020681913,0.0000018464876,0.00004685646,0.00006884432,0.00005678273],"category_scores_gemma":[0.000090431255,0.00010114308,0.000119286895,0.00021069593,0.0001678367,0.00008864549,0.000009810291,0.00025810848,2.1560882e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.19942887,0.001430844,0.27457264,0.006862364,0.0019379113,0.022466527,0.0087862145,0.0001195863,0.41495284,0.000043221364,0.00010569228,0.06929326],"study_design_scores_gemma":[0.04878445,0.4299437,0.27930617,0.020616999,0.0010664614,0.020870507,0.0014085263,0.00026037838,0.19736814,0.000030184314,0.000141948,0.00020249533],"about_ca_topic_score_codex":0.00017982976,"about_ca_topic_score_gemma":0.000019313731,"teacher_disagreement_score":0.42851287,"about_ca_system_score_codex":0.000068769215,"about_ca_system_score_gemma":0.00009814861,"threshold_uncertainty_score":0.4124495},"labels":[],"label_agreement":null},{"id":"W4323351260","doi":"10.1093/jcag/gwac036.132","title":"A132 A CASE OF COLONIC MALAKOPLAKIA PRESENTING AS A LARGE CECAL MASS : NOT EVERY POLYP HAS TO LOOK LIKE A NAIL","year":2023,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Malakoplakia; Medicine; Pathology; Colonoscopy; Cecum; Malacoplakia; Immunosuppression; Gastroenterology; Internal medicine; Colorectal cancer; Cancer","score_opus":0.012580236596099791,"score_gpt":0.2600884285724222,"score_spread":0.2475081919763224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323351260","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9899976,0.000013427316,0.000006750673,0.008830637,0.0005722016,0.0002669697,0.00010413311,0.0000068761383,0.0002013511],"genre_scores_gemma":[0.9970068,0.0000073030715,0.000039581464,0.0014295549,0.000113794566,0.0000059852487,0.0000062900895,0.000017153126,0.0013735929],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982422,0.00019056699,0.00062772556,0.00012441128,0.00035164156,0.00046344363],"domain_scores_gemma":[0.99770343,0.00007795966,0.0011117683,0.00018942234,0.00050310424,0.00041429728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008198621,0.000120744124,0.0004596518,0.00046381349,0.00015401129,0.000017271414,0.000090312395,0.00011997935,0.00008960822],"category_scores_gemma":[0.0006547544,0.00009667554,0.00033799926,0.00025032845,0.000043225424,0.00005912634,0.000040978593,0.00023788385,0.0000118418675],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004644588,0.00013246332,0.9802952,0.000039490533,0.0008462727,0.007511253,0.00034576055,0.000059671325,0.00032554803,0.000020865918,0.009921937,0.00003712361],"study_design_scores_gemma":[0.0048645474,0.001995488,0.9721209,0.00018240586,0.00088761403,0.014661338,0.00026618203,0.00014526656,0.00024060046,0.000076785,0.004477635,0.00008127787],"about_ca_topic_score_codex":0.009481473,"about_ca_topic_score_gemma":0.18859802,"teacher_disagreement_score":0.17911655,"about_ca_system_score_codex":0.0011803829,"about_ca_system_score_gemma":0.0012476919,"threshold_uncertainty_score":0.9971145},"labels":[],"label_agreement":null},{"id":"W4362731271","doi":"10.1186/s13256-023-03856-7","title":"Emphysematous cystitis, iliopsoas abscess, and pneumorrhachis in an elderly woman: a case report","year":2023,"lang":"en","type":"article","venue":"Journal of Medical Case Reports","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Surgical oncology; Iliopsoas; Iliopsoas Muscle; Abscess; General surgery; Surgery; Radiology","score_opus":0.016843086245850628,"score_gpt":0.33108325236753955,"score_spread":0.3142401661216889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362731271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965134,0.001002137,0.000015867523,0.000835451,0.0006674963,0.000307951,0.000004660705,0.000072718205,0.0005802946],"genre_scores_gemma":[0.9987626,0.00027780357,0.00007188654,0.0001877031,0.00045603715,0.000017022176,0.000024487534,0.000043322685,0.00015913512],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.99571234,0.00009915286,0.001831543,0.0004195948,0.0015211448,0.00041620593],"domain_scores_gemma":[0.9965971,0.00011298862,0.0010314378,0.00048264678,0.00034327633,0.0014325335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023187937,0.00026976562,0.00082284695,0.000583127,0.0001404504,0.00006233134,0.000033288637,0.0002607158,0.00024346891],"category_scores_gemma":[0.0014086082,0.0002037627,0.00022571636,0.0005151188,0.00014121887,0.0002573982,0.00006498286,0.0005978406,0.0000046514697],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079729914,0.0006161213,0.07342462,0.00021097144,0.00014770309,0.91548276,0.00025402076,0.0000040431323,0.000025352867,0.0000074979353,0.00066180085,0.009085383],"study_design_scores_gemma":[0.0015261993,0.0007771389,0.018371541,0.0005148723,0.00034770544,0.9764037,0.0005022152,0.00016881755,0.0000325887,0.00016463823,0.0010166295,0.00017396765],"about_ca_topic_score_codex":0.0008348296,"about_ca_topic_score_gemma":0.0004842795,"teacher_disagreement_score":0.06092093,"about_ca_system_score_codex":0.00017054427,"about_ca_system_score_gemma":0.001090471,"threshold_uncertainty_score":0.83092016},"labels":[],"label_agreement":null},{"id":"W4385066304","doi":"10.7759/cureus.42248","title":"Intestinal Lesions Due to Rhodococcus equi in a Patient With Advanced Retroviral Disease and Pulmonary Infection: A Case of Colonic Malakoplakia","year":2023,"lang":"en","type":"article","venue":"Cureus","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Eastern Ontario","funders":"","keywords":"Malakoplakia; Medicine; Rhodococcus equi; Azithromycin; Pathology; Antibiotics; Immunology","score_opus":0.015867006374736554,"score_gpt":0.2922629222699198,"score_spread":0.27639591589518325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385066304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979371,0.0002953813,0.000014106846,0.00012067986,0.000073513846,0.0007815718,0.000035935318,0.00007420845,0.000667492],"genre_scores_gemma":[0.99943024,0.00004913869,0.000096773474,0.000061260835,0.000024580124,0.00020293072,0.000041696567,0.000019489427,0.00007387548],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991245,0.00002779809,0.00022610961,0.0002714318,0.0001296035,0.00022050813],"domain_scores_gemma":[0.9992242,0.00004494725,0.00007729422,0.00023188426,0.00009281787,0.00032885076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060029975,0.00014496408,0.00023987032,0.00016635808,0.000071473405,0.000008010043,0.00001389546,0.000033866403,0.000039353887],"category_scores_gemma":[0.00016203217,0.00011314809,0.000047406924,0.00047426354,0.000056327422,0.00007500228,0.00006026078,0.000093426075,0.000009684643],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013228975,0.0008364358,0.5903713,0.00022330631,0.00008496028,0.3945122,0.00025241208,0.00014792467,0.0002823956,0.00010542827,0.000092481576,0.011768237],"study_design_scores_gemma":[0.0019707084,0.0036661674,0.9469732,0.00075077626,0.00033980445,0.044715673,0.0002073347,0.0004543012,0.00015978684,0.00013952189,0.00039893552,0.00022378056],"about_ca_topic_score_codex":0.00056877855,"about_ca_topic_score_gemma":0.00043710083,"teacher_disagreement_score":0.3566019,"about_ca_system_score_codex":0.0001403993,"about_ca_system_score_gemma":0.00019853347,"threshold_uncertainty_score":0.46140453},"labels":[],"label_agreement":null},{"id":"W4390830486","doi":"10.14309/crj.0000000000001257","title":"Severe Ulcerative Colitis Complicated by Malakoplakia Resulting in Proctocolectomy","year":2023,"lang":"en","type":"article","venue":"ACG Case Reports Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; London Health Sciences Centre; Western University","funders":"","keywords":"Malakoplakia; Medicine; Ulcerative colitis; Proctocolectomy; Azathioprine; Refractory (planetary science); Colitis; Antibiotics; Gastroenterology; Internal medicine; Dermatology; Pathology; Disease","score_opus":0.01919203011141303,"score_gpt":0.31286906390963976,"score_spread":0.29367703379822674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390830486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98893255,0.0001288117,0.000014152198,0.00036900977,0.00022017655,0.0013313417,0.000028093109,0.00017037461,0.008805487],"genre_scores_gemma":[0.9974305,0.000072560106,0.00006819247,0.00016091629,0.00017241831,0.00017278777,0.00015684895,0.00004678198,0.0017189893],"study_design_codex":"case_report","study_design_gemma":"case_report","domain_scores_codex":[0.9975325,0.00009330568,0.000968185,0.00042106575,0.00042982036,0.00055513566],"domain_scores_gemma":[0.9982344,0.00007128131,0.0005636512,0.00031488013,0.00036487074,0.00045093722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066742225,0.00025898486,0.00045702295,0.00033223804,0.00037654457,0.00010366757,0.000021776172,0.0001236669,0.0002592755],"category_scores_gemma":[0.00032975213,0.00021591793,0.00016902978,0.00074817485,0.00005910111,0.0001904586,0.000042696,0.0004984045,0.000033980057],"study_design_candidate":"case_report","study_design_consensus":"case_report","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018852954,0.00030733048,0.10849222,0.00005051859,0.00021402842,0.875005,0.0002360667,0.000022516539,0.00031019183,0.0000072948847,0.011972967,0.0031933074],"study_design_scores_gemma":[0.0021937604,0.00020223719,0.083855964,0.00029633832,0.00013940195,0.9043928,0.00023581559,0.00016130987,0.00042071033,0.00016247162,0.0077225165,0.00021671818],"about_ca_topic_score_codex":0.00023512387,"about_ca_topic_score_gemma":0.000101481935,"teacher_disagreement_score":0.029387727,"about_ca_system_score_codex":0.0004590253,"about_ca_system_score_gemma":0.0004962751,"threshold_uncertainty_score":0.88048774},"labels":[],"label_agreement":null},{"id":"W4392947554","doi":"10.1002/9781119709268.rook154","title":"The Skin and Disorders of the Kidney and Urinary Tract","year":2024,"lang":"en","type":"other","venue":"","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Urinary system; Kidney; Medicine; Urology; Dermatology; Internal medicine","score_opus":0.004320802354001165,"score_gpt":0.24597863761354943,"score_spread":0.24165783525954826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392947554","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027603577,0.011467679,6.41203e-7,0.0009814472,0.00023470832,0.00042709467,0.000028676373,0.000036299516,0.9840631],"genre_scores_gemma":[0.16793084,0.0030507848,0.0000056530534,0.00012789638,0.00007110145,0.000013410951,0.0000058203173,0.00010926167,0.8286852],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996048,0.00001053449,0.00008531494,0.00013501271,0.000091850736,0.00007248608],"domain_scores_gemma":[0.99965614,0.000014374287,0.000052042105,0.00019990643,0.0000061392534,0.00007140828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000034508008,0.00011101277,0.00013615371,0.00003196648,0.000034548844,0.000011717466,0.000014724744,0.000066682915,0.00033406573],"category_scores_gemma":[0.000017269058,0.000043542503,0.000069605536,0.000035486755,0.00012686783,0.000004772266,0.000031740663,0.00007672038,0.0000067034334],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026103035,0.00053433736,0.02883971,0.0009610195,0.0010502471,0.0003274995,0.000092497736,8.047903e-9,0.0000020857237,0.0012953891,0.9564175,0.010453588],"study_design_scores_gemma":[0.0003996158,0.00013139645,0.0130643435,0.00037304437,0.0006308733,0.0006783289,0.000041707084,0.0000021968185,0.0000048226148,0.00048878696,0.9841214,0.00006352667],"about_ca_topic_score_codex":0.00027221948,"about_ca_topic_score_gemma":0.00004228621,"teacher_disagreement_score":0.16517049,"about_ca_system_score_codex":0.000008733252,"about_ca_system_score_gemma":0.000063217376,"threshold_uncertainty_score":0.36577854},"labels":[],"label_agreement":null},{"id":"W4394721509","doi":"10.1016/j.healun.2024.02.885","title":"Malakoplakia Mimicking Endobronchial Tumor After Lung Transplantation","year":2024,"lang":"en","type":"article","venue":"The Journal of Heart and Lung Transplantation","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital","funders":"","keywords":"Malakoplakia; Lung transplantation; Medicine; Lung; Pathology; Transplantation; Lung tumor; Lung cancer; Internal medicine","score_opus":0.005545331785668466,"score_gpt":0.2632276688085298,"score_spread":0.25768233702286136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394721509","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99153227,0.005780299,0.0012458441,0.00044877015,0.00039297948,0.0002201497,0.00002271649,0.000023906723,0.00033304002],"genre_scores_gemma":[0.99693376,0.0024452708,0.00011710897,0.0001479853,0.000264764,0.000004925609,0.000024334155,0.000015619022,0.000046232042],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99918973,0.000057928133,0.00030748683,0.000090085334,0.00022448588,0.0001302513],"domain_scores_gemma":[0.99965006,0.00008674436,0.000063866624,0.000058515394,0.000055631866,0.000085165535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029315954,0.00011548695,0.00017155858,0.00012386202,0.0000974996,0.00004294753,0.000017221439,0.0000343068,0.00007656732],"category_scores_gemma":[0.0000031432235,0.00007022173,0.00011344889,0.0000791008,0.000035766683,0.00021049443,0.0000014226738,0.00017955712,0.000003392478],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.037262026,0.0011254674,0.67706525,0.025160274,0.0050767474,0.06549957,0.048228044,0.000452642,0.12516467,0.0011405468,0.0029147041,0.010910063],"study_design_scores_gemma":[0.005049615,0.0008351885,0.7814072,0.004122383,0.012305476,0.1794279,0.00022031691,0.0028132298,0.011757301,0.00026740532,0.0014753666,0.00031862306],"about_ca_topic_score_codex":0.000025680163,"about_ca_topic_score_gemma":0.000012886468,"teacher_disagreement_score":0.11392834,"about_ca_system_score_codex":0.000044698878,"about_ca_system_score_gemma":0.00010039693,"threshold_uncertainty_score":0.28635588},"labels":[],"label_agreement":null},{"id":"W4399473788","doi":"10.22541/au.171792283.35730073/v1","title":"Science-in-Brief: The 6 th Havemeyer Workshop on Rhodococcus equi - A Decade-Long Journey in Advancing Research into a Major Equine Pathogen (2012-2023)","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Rhodococcus equi; Library science; Pathogen; Microbiology; Medicine; Biology; Computer science","score_opus":0.07360860834848604,"score_gpt":0.4269099616941821,"score_spread":0.35330135334569607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399473788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90228254,0.005992221,0.00006820688,0.0049115797,0.0014026496,0.003709088,0.000026909134,0.00015016012,0.08145664],"genre_scores_gemma":[0.98610336,0.0007367155,0.00025584814,0.00057518383,0.0005591535,0.00067925925,0.00006662612,0.00011522417,0.010908659],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.99316835,0.00030653065,0.0010647393,0.0017338292,0.0021059753,0.0016205697],"domain_scores_gemma":[0.99642915,0.0005007011,0.00020514354,0.0016706792,0.0005704639,0.0006238886],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0065534147,0.0006340457,0.0008836934,0.0031613016,0.0004242664,0.00048093137,0.00047355212,0.00042172548,0.00088944886],"category_scores_gemma":[0.0014873204,0.00038529414,0.00035403416,0.0028620567,0.000570614,0.00016513685,0.0026107924,0.003756921,0.00023355146],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004668853,0.013647225,0.26981628,0.009906721,0.00270654,0.30290633,0.020766905,0.0040899846,0.012092541,0.021168116,0.021894874,0.31633562],"study_design_scores_gemma":[0.03837468,0.009885834,0.38091856,0.14049557,0.0054900795,0.010554397,0.02521991,0.022366311,0.009421604,0.27836922,0.069038674,0.0098651685],"about_ca_topic_score_codex":0.0024958495,"about_ca_topic_score_gemma":0.0049269386,"teacher_disagreement_score":0.30647045,"about_ca_system_score_codex":0.0032145798,"about_ca_system_score_gemma":0.005288112,"threshold_uncertainty_score":0.99985987},"labels":[],"label_agreement":null},{"id":"W4400287572","doi":"10.1111/eve.14011","title":"Highlights of recent clinically relevant papers","year":2024,"lang":"en","type":"article","venue":"Equine Veterinary Education","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Medical physics; Intensive care medicine","score_opus":0.03873767214904576,"score_gpt":0.3756491099553802,"score_spread":0.3369114378063344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400287572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95125586,0.001401671,0.0000082900515,0.0018045952,0.0018933377,0.0002843035,0.0000057390316,0.00009802281,0.043248173],"genre_scores_gemma":[0.9950566,0.0014261319,0.00034042817,0.00013933842,0.00031360248,0.000042438256,0.00013215469,0.000020305164,0.0025289773],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99915355,0.000022765496,0.00034479547,0.00022036307,0.00014603951,0.00011247715],"domain_scores_gemma":[0.9994419,0.000036682446,0.000066674715,0.00023891761,0.00010620402,0.00010961846],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00010937249,0.00010162696,0.0001615083,0.00010815277,0.000028753104,0.000012738784,0.000020956464,0.000048301772,0.0009172822],"category_scores_gemma":[0.000056289977,0.00007674297,0.0001022474,0.00015831055,0.00003294931,0.000056873203,0.000016673508,0.000065782384,0.00006565706],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014402746,0.008140312,0.013257545,0.0028982544,0.0011571562,0.0035062241,0.0012147685,0.0000030716428,0.19877887,0.0063263127,0.014441112,0.7488361],"study_design_scores_gemma":[0.0007067947,0.011917737,0.032420572,0.0010243129,0.00059361494,0.0033739165,0.00012158434,0.00005188377,0.0017307035,0.00050362456,0.94732744,0.00022780374],"about_ca_topic_score_codex":0.000019495394,"about_ca_topic_score_gemma":3.2593684e-7,"teacher_disagreement_score":0.93288636,"about_ca_system_score_codex":0.00011893529,"about_ca_system_score_gemma":0.00065028755,"threshold_uncertainty_score":0.999996},"labels":[],"label_agreement":null},{"id":"W4401436280","doi":"10.1111/evj.14135","title":"Science‐in‐brief: The 6th Havemeyer Workshop on <i>Rhodococcus equi</i>—A decade‐long journey in advancing research into a major equine pathogen (2012–2023)","year":2024,"lang":"en","type":"editorial","venue":"Equine Veterinary Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Rhodococcus equi; Biology; Genetics","score_opus":0.06059360170032344,"score_gpt":0.42637536767155343,"score_spread":0.36578176597122997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401436280","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35004112,0.019073267,0.000066391935,0.0030960802,0.6159403,0.0024695126,0.00013881328,0.0001317592,0.009042791],"genre_scores_gemma":[0.30280015,0.007392341,0.00034088237,0.00040506397,0.67589706,0.0003890455,0.00030566799,0.0005276674,0.011942135],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.98897016,0.0006987473,0.001840725,0.0014629356,0.00455455,0.0024728845],"domain_scores_gemma":[0.9945968,0.001256025,0.0005933221,0.0012530162,0.001200055,0.0011007872],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.011168914,0.00096682354,0.0013297736,0.0045610284,0.0011095138,0.00094699406,0.0008457124,0.00077717955,0.000701885],"category_scores_gemma":[0.0036017378,0.0006454162,0.00057339045,0.003565707,0.00074587134,0.0007168101,0.001087875,0.008398137,0.00018163153],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.0036963255,0.0018658013,0.0011966664,0.00096832827,0.0004890367,0.3074009,0.0013532515,0.00017674589,0.0093554165,0.000038882794,0.6512001,0.022258509],"study_design_scores_gemma":[0.006651673,0.017786799,0.00081594277,0.0153594995,0.00053769903,0.019296274,0.00072116527,0.00016312537,0.000064206615,0.0012402268,0.93632793,0.001035467],"about_ca_topic_score_codex":0.00019464863,"about_ca_topic_score_gemma":0.0002133436,"teacher_disagreement_score":0.28810465,"about_ca_system_score_codex":0.004689246,"about_ca_system_score_gemma":0.0071070907,"threshold_uncertainty_score":0.9995997},"labels":[],"label_agreement":null},{"id":"W4402428751","doi":"10.24425/fmc.2024.150143","title":"Xanthogranulomatous Pyelonephritis: A pooled quantitative analysis of published cases","year":2024,"lang":"en","type":"review","venue":"Folia Medica Cracoviensia","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Xanthogranulomatous pyelonephritis; Medicine; Internal medicine; Kidney; Nephrectomy","score_opus":0.03963537069835956,"score_gpt":0.3887368958382964,"score_spread":0.34910152513993686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402428751","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046468677,0.9928452,0.000029776353,0.000072244344,0.00081591884,0.0015569483,0.0010326506,0.0002555758,0.002927031],"genre_scores_gemma":[0.0045609847,0.99080586,0.00019749551,0.00010376263,0.0001818201,0.00032903082,0.0030365123,0.00014752374,0.0006370258],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99491835,0.0002686246,0.0019343593,0.001147132,0.0011248667,0.0006066673],"domain_scores_gemma":[0.996133,0.00049703056,0.0010362511,0.0011496637,0.0005068579,0.000677196],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005873092,0.0008913567,0.0063812733,0.0029403265,0.00011474973,0.00009135472,0.00016492768,0.0005983747,0.001063731],"category_scores_gemma":[0.0014666701,0.00060268684,0.003838957,0.0043734256,0.00035859545,0.00012465449,0.0001239974,0.0007056386,0.00019362786],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011400614,0.0016833671,0.00028862606,0.08197182,0.13265282,0.10590852,0.00042934422,6.291318e-7,0.0000010484674,0.0012801888,0.018921414,0.65674824],"study_design_scores_gemma":[0.0005711773,0.00044854515,0.00015282752,0.022927746,0.35735956,0.005461528,0.00007520671,0.000076498975,6.679626e-7,0.00005144336,0.6124162,0.00045862843],"about_ca_topic_score_codex":0.0003199327,"about_ca_topic_score_gemma":0.00006405493,"teacher_disagreement_score":0.6562896,"about_ca_system_score_codex":0.00028533992,"about_ca_system_score_gemma":0.0020813323,"threshold_uncertainty_score":0.99984944},"labels":[],"label_agreement":null},{"id":"W4402541871","doi":"10.1093/jas/skae234.738","title":"PSLBI-13 Characterizing the seminal microbiota in mature rams managed on divergent planes of nutrition, and in their male offspring","year":2024,"lang":"en","type":"article","venue":"Journal of Animal Science","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Offspring; Biology; Zoology; Physiology; Ecology; Pregnancy; Genetics","score_opus":0.012457378421870387,"score_gpt":0.2616718959055675,"score_spread":0.2492145174836971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402541871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9979214,0.0011394762,6.430748e-7,0.00052616524,0.000110358145,0.000104276885,0.000004386557,0.000002511854,0.00019079841],"genre_scores_gemma":[0.9994777,0.0003586991,0.000027259852,0.00005715297,0.00005793309,0.000001110312,5.6603324e-7,0.000003217746,0.000016391883],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993605,0.000013872261,0.00022106466,0.00010679868,0.00017922123,0.00011856311],"domain_scores_gemma":[0.99972063,0.000028648392,0.00009542296,0.000057137946,0.000044399763,0.000053775373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041184688,0.00006536895,0.00013931099,0.00019914113,0.000050507457,0.00004136863,0.000051546627,0.000021512817,0.000024400233],"category_scores_gemma":[0.00002520971,0.00003562612,0.000042734537,0.00027691483,0.00010325231,0.00013042415,0.000027203965,0.000167476,8.37123e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004361908,0.00042630534,0.17572565,0.00025702818,0.000031334203,0.003646848,0.0007700861,0.000003893687,0.8172412,0.00006073106,0.000080212485,0.0013205194],"study_design_scores_gemma":[0.00043813905,0.00036563733,0.9749597,0.001672337,0.000028241611,0.0036682538,0.00028734145,0.00011170095,0.018075125,0.000021700236,0.000331258,0.000040578325],"about_ca_topic_score_codex":0.000019168385,"about_ca_topic_score_gemma":0.000007884261,"teacher_disagreement_score":0.79923403,"about_ca_system_score_codex":0.00008151047,"about_ca_system_score_gemma":0.00007196135,"threshold_uncertainty_score":0.1452791},"labels":[],"label_agreement":null},{"id":"W4403761165","doi":"10.1016/j.brachy.2024.08.059","title":"Friday, July 12, 20241:30 PM - 2:45 PM PL01 Presentation Time: 1:30 PM","year":2024,"lang":"en","type":"article","venue":"Brachytherapy","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; Kelowna General Hospital; BC Cancer Agency","funders":"","keywords":"Medicine; Presentation (obstetrics); Surgery","score_opus":0.01453399559191838,"score_gpt":0.30190585158389466,"score_spread":0.2873718559919763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403761165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8449944,0.015396814,0.00047175665,0.0017002848,0.0021706885,0.002727908,0.000141585,0.0011544059,0.13124213],"genre_scores_gemma":[0.9567423,0.0010270354,0.00015595557,0.000932525,0.0016450288,0.00025385228,0.00027310706,0.00013522472,0.038834967],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99809664,0.00006892722,0.0004305798,0.00054776174,0.00046970998,0.0003863738],"domain_scores_gemma":[0.9989769,0.000091894,0.00010565889,0.00045802642,0.00010641889,0.00026109978],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00018420664,0.0003266676,0.00043286724,0.0001931879,0.0001532505,0.00015281701,0.000053828728,0.0001550365,0.0072277854],"category_scores_gemma":[0.000036318994,0.0002545831,0.00032967678,0.00023133983,0.000064002736,0.0002138081,0.000021417047,0.00024398502,0.0038351303],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0026975274,0.0059438385,0.031387106,0.0016238913,0.009454406,0.03761915,0.0035005389,0.00012986816,0.012615827,0.0028681445,0.52523565,0.36692405],"study_design_scores_gemma":[0.019391602,0.0029452532,0.070752166,0.0013123023,0.0026744911,0.004672006,0.000130671,0.0054463344,0.007831922,0.0052583893,0.87807286,0.0015119985],"about_ca_topic_score_codex":0.000119776894,"about_ca_topic_score_gemma":0.0000049239175,"teacher_disagreement_score":0.36541206,"about_ca_system_score_codex":0.00017756519,"about_ca_system_score_gemma":0.00027841638,"threshold_uncertainty_score":0.99999064},"labels":[],"label_agreement":null},{"id":"W4404769018","doi":"10.14440/bladder.2024.0036","title":"Recurrent bladder malakoplakia: A rare bladder lesion mimicking malignancy","year":2024,"lang":"en","type":"article","venue":"Bladder","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brantford Energy (Canada)","funders":"","keywords":"Malakoplakia; Dysuria; Malacoplakia; Pathology; Medicine; Malignancy; Genitourinary system; Lesion; Urothelium; Urinary system; Urinary bladder; Histiocyte; Differential diagnosis; Cystoscopy; Urology; Internal medicine","score_opus":0.026494630715500088,"score_gpt":0.30911276385235165,"score_spread":0.2826181331368516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404769018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88403606,0.03114598,0.0004364448,0.0017692911,0.0033719267,0.0017777422,0.000115385425,0.0012118064,0.07613535],"genre_scores_gemma":[0.98927945,0.0005644553,0.00022145397,0.0005222371,0.0007265967,0.00013311468,0.00022520279,0.000115328694,0.008212173],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976522,0.000046683905,0.00047487667,0.0007562955,0.000501956,0.0005679963],"domain_scores_gemma":[0.9988399,0.000054614495,0.00008633654,0.0005290551,0.00015955648,0.0003305375],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001439298,0.0004189707,0.0004124467,0.00027597477,0.00019060029,0.00014329204,0.00006243721,0.00020626209,0.0035173763],"category_scores_gemma":[0.000051657582,0.000323731,0.00039571314,0.00037270464,0.00007770474,0.0002037661,0.00007458469,0.0003228541,0.0009230247],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011051793,0.0067801285,0.06293636,0.0037216237,0.01437101,0.1393871,0.003986794,0.000043438708,0.0074249986,0.010662728,0.3618217,0.38775894],"study_design_scores_gemma":[0.009373925,0.0022252763,0.09209002,0.007146941,0.00900198,0.024350772,0.0008825978,0.0026747924,0.009869415,0.0027267227,0.8367455,0.0029120478],"about_ca_topic_score_codex":0.000037660193,"about_ca_topic_score_gemma":0.000015431218,"teacher_disagreement_score":0.4749238,"about_ca_system_score_codex":0.00019521093,"about_ca_system_score_gemma":0.00036671542,"threshold_uncertainty_score":0.9999215},"labels":[],"label_agreement":null},{"id":"W4406451491","doi":"10.1016/s1166-8598(20)81916-4","title":"10.1016/s1166-8598(20)81916-4","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Humanities; Philosophy; Traditional medicine; Medicine","score_opus":0.004922991552659072,"score_gpt":0.19395999403064298,"score_spread":0.1890370024779839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406451491","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011348467,0.000118181306,2.3697358e-7,0.00017559035,0.0000022455824,0.00035384676,0.000019292505,0.00017357995,0.9878086],"genre_scores_gemma":[0.0044553797,6.079335e-7,0.00003053415,0.00010342714,0.00017842432,0.000036908652,0.00008156865,0.000032627777,0.99508053],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990972,0.000014921708,0.00018157941,0.0002447041,0.00020129378,0.00026025667],"domain_scores_gemma":[0.9992319,0.000014516576,0.00002918121,0.0003374282,0.000060671067,0.00032634375],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.000056760207,0.00015718299,0.0002245929,0.000074100164,0.00007982924,0.00001991464,0.000033105232,0.00005822646,0.99755406],"category_scores_gemma":[0.000019392586,0.00012974165,0.00011695336,0.00012883438,0.00002483494,0.00004531907,0.000014291132,0.0000743813,0.9907098],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032447008,0.0006569485,0.000020540305,0.000026766535,0.00022200383,0.0015678238,0.000015336514,0.000015405094,0.000039058275,8.264183e-7,0.28645143,0.7106594],"study_design_scores_gemma":[0.0008404851,0.0003742972,0.00047132457,0.00004057611,0.00020462518,0.0004903027,4.9475517e-7,0.000033160886,0.00009455371,0.0000050402555,0.9973128,0.00013235386],"about_ca_topic_score_codex":0.000032189033,"about_ca_topic_score_gemma":1.5743237e-7,"teacher_disagreement_score":0.7108614,"about_ca_system_score_codex":0.00008766143,"about_ca_system_score_gemma":0.00007766116,"threshold_uncertainty_score":0.52907103},"labels":[],"label_agreement":null},{"id":"W4407285120","doi":"10.1093/jcag/gwae059.067","title":"A67 CASE REPORT: A RARE CASE OF MALAKOPLAKIA","year":2025,"lang":"en","type":"article","venue":"Journal of the Canadian Association of Gastroenterology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Malakoplakia; Malacoplakia; Medicine; Pathology","score_opus":0.005857646516331933,"score_gpt":0.25241578416774085,"score_spread":0.2465581376514089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407285120","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99372107,0.000039520775,0.000013714255,0.004131562,0.00062543864,0.00015848718,0.000045686345,0.0000022280196,0.0012622826],"genre_scores_gemma":[0.99815434,0.000005894184,0.00006110962,0.0005753909,0.00005401925,0.0000018331984,0.0000034571563,0.000006509257,0.0011374654],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.998706,0.00013426703,0.00071701495,0.00008308208,0.0001595884,0.0002000347],"domain_scores_gemma":[0.99716246,0.000046375204,0.0016393487,0.00020836912,0.00075493153,0.00018854366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054872205,0.00008907346,0.00040769234,0.0003266073,0.00009358667,0.00000640725,0.000046797206,0.0001028366,0.000060197],"category_scores_gemma":[0.0006327116,0.00006540327,0.0003072036,0.00013711379,0.000048070422,0.000040371022,0.000016478118,0.00018968982,4.1367147e-7],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014953273,0.00009783346,0.7562898,0.00003582577,0.00074472814,0.23887447,0.00005356422,0.000015157592,0.000024198222,0.000042619544,0.0035659275,0.000106340776],"study_design_scores_gemma":[0.002685606,0.00055120536,0.22033489,0.00014083993,0.0010626799,0.77346724,0.00011772936,0.00001500786,0.000117471995,0.00009995057,0.0013764674,0.000030907595],"about_ca_topic_score_codex":0.0134589765,"about_ca_topic_score_gemma":0.2970221,"teacher_disagreement_score":0.53595495,"about_ca_system_score_codex":0.001123622,"about_ca_system_score_gemma":0.0010826772,"threshold_uncertainty_score":0.9931105},"labels":[],"label_agreement":null},{"id":"W4410969086","doi":"10.1007/s00345-025-05696-0","title":"Identifying predictors of in-hospital mortality in patients with emphysematous pyelonephritis: insights from a large retrospective cohort","year":2025,"lang":"en","type":"article","venue":"World Journal of Urology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Medicine; Retrospective cohort study; Nephrology; Internal medicine; Cohort; Intensive care medicine; Cohort study; Emergency medicine","score_opus":0.003793909576201472,"score_gpt":0.243072391307419,"score_spread":0.23927848173121755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410969086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9973743,0.0008929161,0.00002598602,0.000043785585,0.0004292064,0.00035022903,0.000019368892,0.0000070693704,0.0008571627],"genre_scores_gemma":[0.9997274,0.000057216308,0.000027260747,0.00008598162,0.000042679247,0.000007881362,0.000018782352,0.000011180129,0.000021603224],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9985807,0.00007150939,0.00067487144,0.00019037997,0.00029714586,0.00018541247],"domain_scores_gemma":[0.9989764,0.000040101495,0.0004571319,0.00017336757,0.00027685586,0.00007614407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012904363,0.00013646051,0.00066017755,0.00061412546,0.000026334377,0.000006509778,0.000047972917,0.00006910726,0.00003647609],"category_scores_gemma":[0.00007429614,0.00010506864,0.00010517329,0.00043878483,0.000073818075,0.00011132275,0.000031400166,0.00030424274,7.028106e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005932679,0.002277542,0.9930236,0.00002940729,0.000887892,0.002573969,0.0002953694,0.00000665498,0.00000887561,0.00018451882,0.000047472553,0.000071432056],"study_design_scores_gemma":[0.006604936,0.00083471905,0.9905039,0.00027867916,0.00046682113,0.000025690706,0.000029328872,0.000004857618,0.000030357829,0.00109557,0.000059062033,0.00006608135],"about_ca_topic_score_codex":0.0002644263,"about_ca_topic_score_gemma":0.0010370566,"teacher_disagreement_score":0.006011668,"about_ca_system_score_codex":0.0002318606,"about_ca_system_score_gemma":0.00019279169,"threshold_uncertainty_score":0.4284575},"labels":[],"label_agreement":null},{"id":"W4411579798","doi":"10.1111/jvp.70007","title":"Is Rifampin (Rifampicin) Essential for the Treatment of <i>Rhodococcus equi</i> Infections in Foals? A Critical Review of the Role of Rifampin","year":2025,"lang":"en","type":"review","venue":"Journal of Veterinary Pharmacology and Therapeutics","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Rhodococcus equi; Rifampicin; Microbiology; Medicine; Rhodococcus; Biology; Antibiotics; Bacteria; Genetics","score_opus":0.08421553456031394,"score_gpt":0.464724536901051,"score_spread":0.38050900234073703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411579798","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036889012,0.9931494,0.000030076115,0.00032303148,0.0007552932,0.0017421311,0.00015875822,0.0000028400425,0.00014958727],"genre_scores_gemma":[0.018394029,0.98080134,0.00003986855,0.00043060214,0.00015408597,0.00011449432,0.0000066015496,0.000020180016,0.000038806407],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99763656,0.0003710652,0.0014343393,0.00017427989,0.00018344019,0.00020031743],"domain_scores_gemma":[0.9967708,0.0013035643,0.0012342236,0.00026418015,0.0003612886,0.00006592007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039894605,0.00031175258,0.001977752,0.00021252656,0.00008500928,0.0000043774903,0.0001256995,0.00020345095,0.00007142869],"category_scores_gemma":[0.00005061461,0.00015994077,0.0012312772,0.00029062966,0.00033004384,0.000039831248,0.000046305508,0.0002888722,2.0242148e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015345577,0.010278985,0.0013623942,0.158999,0.012287606,0.00031412154,0.00038834856,0.0000022728732,0.000704773,0.00024971273,0.00024025052,0.813638],"study_design_scores_gemma":[0.0031588068,0.007690706,0.0001430938,0.043178618,0.033682678,0.0032612348,0.00003594389,0.000012723438,0.00058835343,0.0002310182,0.9078729,0.00014393569],"about_ca_topic_score_codex":0.000013696292,"about_ca_topic_score_gemma":0.0000010695078,"teacher_disagreement_score":0.90763265,"about_ca_system_score_codex":0.00011448834,"about_ca_system_score_gemma":0.000869252,"threshold_uncertainty_score":0.65221953},"labels":[],"label_agreement":null},{"id":"W4414319101","doi":"10.1093/bjd/ljaf370","title":"Metformin in necrobiotic xanthogranuloma","year":2025,"lang":"en","type":"article","venue":"British Journal of Dermatology","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"Institute of Nano Science and Technology; Medizinische Fakultät, Universität zu Köln; Deutsche Forschungsgemeinschaft; Mazak Foundation; Faraday Institution; Health Research","keywords":"Metformin; Macrophage; Disease; Repurposing; Granulomatous disease; Drug repositioning","score_opus":0.004630283056386433,"score_gpt":0.26956898308600125,"score_spread":0.26493870002961484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414319101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98545605,0.006832788,0.00016673718,0.00053686113,0.00031277695,0.00012387829,0.0000021739143,0.00000924073,0.006559476],"genre_scores_gemma":[0.9987102,0.000559275,0.00022934063,0.00031279505,0.00001966165,0.000002118298,0.0000035629732,0.000006183182,0.00015683782],"study_design_codex":"observational","study_design_gemma":"case_report","domain_scores_codex":[0.99914336,0.000042406708,0.000483158,0.00008205027,0.00008085539,0.00016818702],"domain_scores_gemma":[0.99953717,0.000037153757,0.00014631815,0.000073135445,0.00012845473,0.00007778629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007846975,0.00007095279,0.0003964875,0.00029243378,0.00003722607,0.000016503625,0.000034155564,0.00007788643,0.000067304645],"category_scores_gemma":[0.00011694875,0.00007109449,0.0001443477,0.00020303781,0.000052773103,0.00006666367,0.0000136767785,0.00018482661,0.0000046272307],"study_design_candidate":"case_report","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018544066,0.0009697469,0.5071802,0.00016328807,0.000375254,0.40625182,0.00003282924,0.000002016677,0.00018691171,0.0003532439,0.0035414842,0.080757745],"study_design_scores_gemma":[0.004198373,0.0000753401,0.21903343,0.00073616003,0.00025003427,0.7693362,0.000052013627,0.000014285918,0.001413309,0.00058102317,0.0042473953,0.000062384],"about_ca_topic_score_codex":0.000063263025,"about_ca_topic_score_gemma":0.000057739006,"teacher_disagreement_score":0.36308444,"about_ca_system_score_codex":0.00006240495,"about_ca_system_score_gemma":0.0002486827,"threshold_uncertainty_score":0.2899149},"labels":[],"label_agreement":null},{"id":"W4416723337","doi":"10.5489/cuaj.9352","title":"Case - Pediatric ureteropelvic junction obstruction leading to emphysematous pyelonephritis","year":2025,"lang":"en","type":"article","venue":"Canadian Urological Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Ureteropelvic junction; Kidney disease; Complication; Computed tomography; Congenital disease","score_opus":0.009067535094845513,"score_gpt":0.24132862524618506,"score_spread":0.23226109015133956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416723337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9907735,0.00020030892,0.00019688532,0.0034782356,0.001275125,0.00027544305,0.000012967506,0.000054783046,0.003732737],"genre_scores_gemma":[0.99476445,0.000047066595,0.00009212076,0.0031194757,0.00059425586,0.000017089134,0.000016703121,0.000011276477,0.0013375627],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99870366,0.000083672756,0.00035349134,0.0002224283,0.00022535634,0.00041140383],"domain_scores_gemma":[0.998572,0.00004887069,0.00017359437,0.00010562442,0.00034174768,0.0007581952],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027082997,0.00014516673,0.00025585358,0.0005203803,0.00054209906,0.00012557641,0.000030676103,0.00020808801,0.0002911622],"category_scores_gemma":[0.00054764876,0.00012655296,0.00015977469,0.0005041555,0.000009945044,0.00010332534,0.000010401147,0.00036174268,0.00011067897],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040666597,0.00006787982,0.9588807,0.000016152304,0.00019493568,0.017574469,0.00006394848,0.000052689695,0.000031011026,0.00015436909,0.013427487,0.009495675],"study_design_scores_gemma":[0.0017717588,0.0004612207,0.89526707,0.00003309155,0.00083674263,0.06734013,0.00006847866,0.00005874846,0.000030174813,0.0008282159,0.033058777,0.00024560894],"about_ca_topic_score_codex":0.0013908743,"about_ca_topic_score_gemma":0.00068955653,"teacher_disagreement_score":0.06361366,"about_ca_system_score_codex":0.0023543069,"about_ca_system_score_gemma":0.0005421057,"threshold_uncertainty_score":0.615643},"labels":[],"label_agreement":null},{"id":"W6901832310","doi":"10.60692/mvzhx-j0d68","title":"Diagnosing Rhodococcus equi Infections in a Setting Where Tuberculosis Is Highly Endemic: a Double Challenge","year":2015,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Rhodococcus equi; Tuberculosis; Human immunodeficiency virus (HIV); Tuberculosis diagnosis; Disease; Mycobacterium tuberculosis; AIDS-Related Opportunistic Infections","score_opus":0.054096545433736536,"score_gpt":0.27326247928996256,"score_spread":0.21916593385622601,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6901832310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9652581,0.00006101427,0.0006377969,0.00024631404,0.00043167378,0.0010259753,0.00005557588,0.00033943699,0.031944096],"genre_scores_gemma":[0.99912626,0.0000023170328,0.00004761199,0.00022762781,0.00012237091,0.0003286767,0.000042748175,0.000020781756,0.00008162365],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9982577,0.00004597835,0.0007628963,0.0002098956,0.00036960782,0.000353903],"domain_scores_gemma":[0.99873245,0.000010967959,0.00030060756,0.00036228457,0.00030068288,0.00029301035],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003752515,0.00024553918,0.0003774593,0.00046077595,0.00014295177,0.00012439162,0.000040158233,0.00016544976,0.000032783766],"category_scores_gemma":[0.00003153531,0.00020165106,0.00013635466,0.0003307196,0.00002135937,0.0007406186,0.000049714854,0.00016046829,0.0004981401],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009084786,0.00003945547,0.9474679,0.0005451215,0.00013951065,0.00012547696,0.050687633,0.00010600002,3.388183e-7,0.000051912004,0.0002959197,0.00044987196],"study_design_scores_gemma":[0.12341009,0.0034129086,0.59460175,0.01573989,0.003392918,0.01698467,0.1930296,0.022117132,0.0016564212,0.000096114614,0.02135776,0.004200754],"about_ca_topic_score_codex":0.0003369656,"about_ca_topic_score_gemma":0.0000050710273,"teacher_disagreement_score":0.35286617,"about_ca_system_score_codex":0.00077661505,"about_ca_system_score_gemma":0.00018662828,"threshold_uncertainty_score":0.82230914},"labels":[],"label_agreement":null},{"id":"W6925885133","doi":"10.18739/a2319s36m","title":"Asynchrony in the timing of goose-vegetation interactions: implications for biogeochemical cycling in wet sedge tundra Tutakoke River, Yukon Delta NWR, Alaska, 2014-2016","year":2017,"lang":"en","type":"dataset","venue":"California Digital Library","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tundra; Subarctic climate; Ecosystem; Phenology; Herbivore; Biogeochemical cycle; Delta; Graminoid; Climate change; Growing season","score_opus":0.022663601716160386,"score_gpt":0.3039009712003166,"score_spread":0.28123736948415623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6925885133","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022280203,0.00081481953,0.000027175874,0.000402661,0.00016982884,0.0012719897,0.9738204,0.000038530554,0.0011743996],"genre_scores_gemma":[0.12932102,0.00028545418,0.00008368728,0.00018607525,0.00021221316,0.00033698292,0.86947984,0.00004114441,0.000053610456],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982111,0.000034386754,0.0007709917,0.0004762954,0.00018118254,0.0003260817],"domain_scores_gemma":[0.99801725,0.0003913031,0.00056440046,0.00082514266,0.00006978365,0.00013212724],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00010657886,0.00035354125,0.0005532883,0.00038141626,0.00012815243,0.00019757856,0.00024205758,0.00025416468,0.000061184735],"category_scores_gemma":[0.0003124407,0.00026675744,0.00031581926,0.00015242187,0.00018766192,0.000789301,0.00012136184,0.00034248753,0.00015062052],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017384099,0.0011840509,0.04008663,0.0007653507,0.00018197714,0.00017680695,0.000032577238,0.0000049282776,0.000015778032,0.000013597905,0.95301193,0.0043525477],"study_design_scores_gemma":[0.0019961488,0.00016226206,0.012944014,0.0019180786,0.0004478683,0.00035897127,0.000039540944,0.00010796308,0.00015443117,0.0020487476,0.97942984,0.00039213226],"about_ca_topic_score_codex":0.000048851827,"about_ca_topic_score_gemma":0.000022980426,"teacher_disagreement_score":0.10704082,"about_ca_system_score_codex":0.0001454913,"about_ca_system_score_gemma":0.000500056,"threshold_uncertainty_score":0.9999785},"labels":[],"label_agreement":null},{"id":"W6926453181","doi":"10.25384/sage.23205005","title":"Supplemental Material - Environmental determinants of infectious and chronic disease prevention behaviours: A systematic review and thematic synthesis of qualitative research","year":2023,"lang":"en","type":"article","venue":"Sage Journals Data","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Qualitative research; Thematic analysis; Disease prevention; Chronic disease; Disease; Alternative medicine; Pearl","score_opus":0.12798870911664398,"score_gpt":0.4729960737426327,"score_spread":0.3450073646259887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926453181","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9579535,0.03552972,0.000003102051,0.000046600893,0.000026166685,0.0016742656,0.0047467886,0.000010392828,0.0000094491315],"genre_scores_gemma":[0.95954126,0.03990437,0.000014904642,0.0000055409923,0.00002081559,0.00010810299,0.00034531113,0.000017163791,0.00004252701],"study_design_codex":"systematic_review","study_design_gemma":"systematic_review","domain_scores_codex":[0.9978727,0.0005568321,0.0006998679,0.00023134556,0.0004491984,0.00019003123],"domain_scores_gemma":[0.9986199,0.00023099977,0.00042554885,0.0005193606,0.00003637582,0.00016779834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002429224,0.00012807472,0.0006606827,0.00018765425,0.0000981602,0.000022059214,0.00007316827,0.000030406594,0.00066592905],"category_scores_gemma":[0.0005219445,0.0000937638,0.00006429098,0.00014181162,0.00015614607,0.00019707064,0.00024075923,0.000081320686,0.0000042183947],"study_design_candidate":"systematic_review","study_design_consensus":"systematic_review","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002595379,0.0029595997,0.14140849,0.8313857,0.0024530059,0.002707346,0.0025460692,1.867147e-7,0.00513367,0.000006220774,0.0005142669,0.010625928],"study_design_scores_gemma":[0.0039224816,0.0019047919,0.15556097,0.79854333,0.024686525,0.003520677,0.0053350143,0.00019841248,0.0050699282,0.0007991832,0.0000040211194,0.00045463967],"about_ca_topic_score_codex":0.00005010216,"about_ca_topic_score_gemma":0.0000149270045,"teacher_disagreement_score":0.032842327,"about_ca_system_score_codex":0.00009238946,"about_ca_system_score_gemma":0.000102279715,"threshold_uncertainty_score":0.72914565},"labels":[],"label_agreement":null},{"id":"W6926599555","doi":"10.25316/ir-12493","title":"The Nanaimo Free Press [Wednesday, March 28, 1888]","year":2019,"lang":"en","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"","score_opus":0.009427700951681377,"score_gpt":0.21841708662504886,"score_spread":0.20898938567336747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926599555","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000013087013,0.0013030434,0.000043841752,0.00023090531,0.0034334746,0.0010955769,0.00027414932,0.00022734098,0.9933786],"genre_scores_gemma":[0.00082765694,0.0019956958,0.000026145695,0.00005924889,0.00036517833,0.0000037501584,0.0000058237674,0.00028195206,0.99643457],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982888,0.000069107846,0.00013826894,0.000561472,0.00046164208,0.00048067656],"domain_scores_gemma":[0.9979709,0.00007394189,0.00027298197,0.0013347829,0.00011654365,0.00023089755],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000067691464,0.0004397379,0.00052125676,0.00034746827,0.00024743806,0.00004673649,0.0002720392,0.0003642525,0.00046851765],"category_scores_gemma":[0.000034707595,0.00031116873,0.0003217252,0.00027089464,0.00016609322,0.000060427272,0.00022745524,0.00034774205,0.00019079098],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001824201,0.00017958302,0.00007407446,0.00017804235,0.00091011205,0.002806622,0.00003829341,0.0000020987202,0.000001731733,0.0005406646,0.9945896,0.0004967516],"study_design_scores_gemma":[0.0031514207,0.00017761145,0.000039916027,0.00030249712,0.0007611615,0.00005890553,0.00017900205,0.000011323362,0.000008537307,0.000020703912,0.994956,0.00033288746],"about_ca_topic_score_codex":0.0018415134,"about_ca_topic_score_gemma":0.0028589552,"teacher_disagreement_score":0.0030682962,"about_ca_system_score_codex":0.00030819292,"about_ca_system_score_gemma":0.0004171581,"threshold_uncertainty_score":0.999934},"labels":[],"label_agreement":null},{"id":"W6926664221","doi":"10.25384/sage.c.6930390","title":"Who Profits from Occupational Licensing?","year":2023,"lang":"en","type":"other","venue":"Sage Journals Data","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Disadvantaged; Wage; Occupational licensing; Quantile regression; Quarter (Canadian coin); Economic shortage; Profit (economics); Inequality","score_opus":0.0768167563357032,"score_gpt":0.3719396680778485,"score_spread":0.29512291174214533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926664221","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025173628,0.12754372,0.00038475878,0.001034063,0.00449446,0.0025033127,0.07360979,0.0021245382,0.785788],"genre_scores_gemma":[0.0017793517,0.03308637,0.0006886493,0.0008436556,0.0071511716,0.000022858725,0.012431005,0.0020762933,0.94192064],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983828,0.000035091696,0.0003329463,0.00047653425,0.0005361931,0.00023640036],"domain_scores_gemma":[0.997966,0.000046048157,0.00041105459,0.0012577029,0.000067599685,0.00025158707],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00016348159,0.00026282985,0.00047878534,0.00025219182,0.00007315381,0.00007141493,0.00014457255,0.00023417562,0.022786902],"category_scores_gemma":[0.00020056636,0.00020372082,0.00010997678,0.00015455669,0.00003434061,0.00009549303,0.00018156196,0.0002983184,0.0009192832],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033425393,0.00018306683,0.036834624,0.00004832968,0.0015379153,0.006289669,0.000013034818,8.64754e-8,0.0000071138943,8.117454e-7,0.90788275,0.047169145],"study_design_scores_gemma":[0.0018077801,0.00006256749,0.119401574,0.013377764,0.0018215318,0.000791741,0.000015202909,0.000048187045,0.000013961418,0.00006809669,0.86223346,0.00035815677],"about_ca_topic_score_codex":0.0010829485,"about_ca_topic_score_gemma":0.00046370015,"teacher_disagreement_score":0.15613264,"about_ca_system_score_codex":0.000086965214,"about_ca_system_score_gemma":0.00040380238,"threshold_uncertainty_score":0.9998586},"labels":[],"label_agreement":null},{"id":"W6926709663","doi":"10.25549/examiner-c44-34644","title":"Making preparations for annual doll fair for Children's Hospital ...at the home of Mrs. Ridgway (not in picture), 355 South Rimpau Boulevard, 1951","year":2021,"lang":"en","type":"dataset","venue":"University of Southern California Digital Library","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Performance art; Slip (aerodynamics)","score_opus":0.007930277060842013,"score_gpt":0.20949170217433766,"score_spread":0.20156142511349565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6926709663","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11485557,0.00018102449,0.00005021383,0.00013011231,0.00006554468,0.0014250061,0.88311493,0.000036880825,0.00014071794],"genre_scores_gemma":[0.106031366,0.000021143545,0.00008169067,0.000073894356,0.00012750595,0.000008089214,0.8929056,0.000044744163,0.00070594484],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984669,0.000028349816,0.00040315726,0.00048225076,0.00030309203,0.0003162236],"domain_scores_gemma":[0.9985276,0.00012400447,0.0005380974,0.0005433946,0.00013070223,0.0001361934],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000065306034,0.00035671506,0.00067510654,0.0002045534,0.00019653949,0.000053796222,0.00020103686,0.00028705245,0.0003645765],"category_scores_gemma":[0.000068353984,0.0002904153,0.0006783861,0.00017596717,0.00024618005,0.00019683084,0.0002676245,0.0001878896,0.000090025715],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016313256,0.0012497788,0.029737687,0.0007923552,0.0012713281,0.00030278525,0.0006993971,0.00004993051,0.0000014591521,0.0000066660764,0.96398014,0.0002771373],"study_design_scores_gemma":[0.004973006,0.00056405383,0.0019193969,0.00063228793,0.0015347445,0.00009660331,0.0038458295,0.000017602486,0.000059370715,0.00015141709,0.98564786,0.0005578453],"about_ca_topic_score_codex":0.000047393507,"about_ca_topic_score_gemma":0.000028937417,"teacher_disagreement_score":0.027818289,"about_ca_system_score_codex":0.00011465442,"about_ca_system_score_gemma":0.0005691665,"threshold_uncertainty_score":0.9999548},"labels":[],"label_agreement":null},{"id":"W7095135100","doi":"","title":"© 2013 Canadian Urological Association case seRIes","year":2013,"lang":"en","type":"article","venue":"","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Subclinical infection; Disease; Association (psychology); Hyperplasia; Therapeutic approach; Epidemiology","score_opus":0.008162188411863914,"score_gpt":0.2264745741787165,"score_spread":0.21831238576685258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7095135100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90764844,0.000034059347,0.0000021868325,0.004378127,0.00008668357,0.00027212672,0.000004707095,0.0000577488,0.087515935],"genre_scores_gemma":[0.9810459,0.000011720266,0.00006393322,0.0010937676,0.000060130784,0.000041592048,0.000024155244,0.0000059631093,0.017652826],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995217,0.000011034675,0.00009287597,0.00010229544,0.000081113285,0.00019099226],"domain_scores_gemma":[0.99941033,0.00001108933,0.000028305467,0.00009601276,0.00012264983,0.00033162156],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00003940727,0.00006495618,0.00009575727,0.00004522074,0.00008997552,0.000025333005,0.0000062641498,0.00007389104,0.007888587],"category_scores_gemma":[0.00004992256,0.000044167875,0.000046153502,0.000045638822,0.000009658607,0.000085904474,0.0000044777603,0.00004994672,0.00092503784],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000048132197,0.00009831502,0.9307547,0.0000061476794,0.00012885919,0.018032486,0.000025270227,6.9944974e-7,0.000015652891,0.00031755224,0.049224053,0.0013914029],"study_design_scores_gemma":[0.0013985477,0.00055167184,0.8059074,0.000009422065,0.00037235895,0.0981179,0.00017629986,0.00016042107,0.00015281,0.0007109799,0.09218715,0.00025502397],"about_ca_topic_score_codex":0.30758494,"about_ca_topic_score_gemma":0.046259105,"teacher_disagreement_score":0.26132584,"about_ca_system_score_codex":0.00028164688,"about_ca_system_score_gemma":0.00012569434,"threshold_uncertainty_score":0.99985284},"labels":[],"label_agreement":null},{"id":"W7159603118","doi":"10.1093/cid/ciaf729","title":"A 67-year-Old Immunocompromised Male Presenting With Right Upper-Quadrant Abdominal Pain and Hepatic Lesions","year":2025,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Manitoba Health; University of Manitoba","funders":"","keywords":"Abdominal pain; Abdomen; Disease; Complication; Immunosuppression","score_opus":0.01435618611618606,"score_gpt":0.3236551153641029,"score_spread":0.30929892924791685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7159603118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897887,0.0008636489,0.00038682175,0.00025688353,0.00024066163,0.0012169812,0.00003166864,0.0002504567,0.0069641913],"genre_scores_gemma":[0.99569905,0.00019566357,0.00008720415,0.00077989994,0.00016389579,0.00021545324,0.000065337175,0.000036585203,0.0027569402],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99768984,0.00030344518,0.0007275114,0.00063061406,0.00024061678,0.00040799694],"domain_scores_gemma":[0.99770886,0.0008606137,0.00021468259,0.0005410868,0.00020424198,0.00047054587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004171406,0.00032809374,0.0007042623,0.00018037853,0.00042345174,0.00009897589,0.000056256504,0.00014092906,0.00041732128],"category_scores_gemma":[0.0008870227,0.00023422114,0.00038096425,0.00028559446,0.00038897392,0.00010477072,0.0000903531,0.0002930764,0.000030771105],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047743513,0.0029791002,0.9862185,0.00033841148,0.000731615,0.0016138668,0.00002205364,0.0000033977701,0.000015370428,0.000282206,0.00076155015,0.00655647],"study_design_scores_gemma":[0.0077027925,0.0011641753,0.9838875,0.0006376753,0.002383457,0.00033904146,0.00005124405,0.0007299543,0.000037814963,0.00069431274,0.002077562,0.0002944943],"about_ca_topic_score_codex":0.00013751358,"about_ca_topic_score_gemma":0.000025416713,"teacher_disagreement_score":0.007225357,"about_ca_system_score_codex":0.00009434525,"about_ca_system_score_gemma":0.0003959936,"threshold_uncertainty_score":0.9551261},"labels":[],"label_agreement":null},{"id":"W75694992","doi":"10.1503/cmaj.061033","title":"Xanthogranulomatous pyelonephritis","year":2007,"lang":"en","type":"article","venue":"Canadian Medical Association Journal","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Dysuria; Medicine; Abdomen; Renal colic; Xanthogranulomatous pyelonephritis; Physical examination; Flank pain; Tenderness; Urinary system; Abdominal pain; Computed tomography; Medical history; Radiology; Surgery; Kidney; Nephrectomy; Pathology; Internal medicine","score_opus":0.004428341161733841,"score_gpt":0.24594783358968783,"score_spread":0.24151949242795398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W75694992","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9187813,0.0005438865,0.0002117268,0.008350444,0.0012086768,0.00017172423,0.000014378833,0.000054474553,0.070663385],"genre_scores_gemma":[0.9894141,0.00013050777,0.00009872724,0.008085835,0.001438611,0.0000020580421,0.000014799599,0.000016547654,0.000798848],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99784344,0.000029856656,0.00036848205,0.00011171603,0.0011329823,0.0005135224],"domain_scores_gemma":[0.9962687,0.00006306047,0.00013679349,0.00008114559,0.00038668298,0.0030636291],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00131399,0.0000974085,0.00019225989,0.00022763076,0.00026645476,0.00004637664,0.000038417344,0.00028097146,0.0045515373],"category_scores_gemma":[0.00081241626,0.00008425704,0.00014882616,0.00019189688,0.000025686479,0.000059522084,0.0000045188435,0.00050631457,0.00021651314],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019172521,0.00011365609,0.7282578,0.000009382298,0.00029941052,0.0623415,0.000076327764,1.2024135e-7,0.000010207506,0.00024023345,0.046187185,0.16244504],"study_design_scores_gemma":[0.001797098,0.00009363344,0.4609757,0.0000845946,0.00010321013,0.03233945,0.00010602761,0.000010546711,0.00003861458,0.000110753936,0.50422394,0.00011645956],"about_ca_topic_score_codex":0.0019417992,"about_ca_topic_score_gemma":0.014348796,"teacher_disagreement_score":0.45803672,"about_ca_system_score_codex":0.00121864,"about_ca_system_score_gemma":0.0025330787,"threshold_uncertainty_score":0.99635845},"labels":[],"label_agreement":null}]}