{"meta":{"query_hash":"b437c4fed9fa","filters":{"topic":"Inflammation biomarkers and pathways"},"cohort_total":141,"direct_labels_cover":0,"predictions_cover":141,"exported":141,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/b437c4fed9fa","api":"https://metacan.xera.ac/api/v1/cohort?topic=Inflammation+biomarkers+and+pathways"},"results":[{"id":"W1153435775","doi":"","title":"Patterned Expression of LM-511 and Integrin 6 in Human Schlemm’s Canal Endothelia","year":2010,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Schlemm's canal; Integrin; Cell biology; Anatomy; Chemistry; Biology; Trabecular meshwork; Neuroscience; Cell; Glaucoma","score_opus":0.025616742899771554,"score_gpt":0.30537649536535233,"score_spread":0.27975975246558077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1153435775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969694,0.0005852019,0.00075354107,0.000042725467,0.0000122436895,0.000009689639,0.00016031627,0.00001157413,0.0014554525],"genre_scores_gemma":[0.99642915,0.00032624134,0.0011616674,0.00004329233,0.000008947494,0.000022251768,0.0002901728,0.0000055437276,0.0017127374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998023,0.0000328629,0.000015163215,0.000031144096,0.0000372879,0.00008129621],"domain_scores_gemma":[0.99989545,0.000028908808,0.000019900192,0.000016277168,0.000017977676,0.00002147775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000106335036,0.00008527003,0.00012715865,0.00027548155,0.0002249766,0.00041677075,0.00008292378,0.0002619155,0.001287262],"category_scores_gemma":[0.00016306229,0.00015940057,0.00013880426,0.0002422744,0.00015542857,0.0002560848,0.00024089447,0.00027388457,0.0005584741],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031710332,0.000016504931,0.0021150475,0.000030203733,0.0000055615633,0.00022692498,0.00011932953,0.0000598922,0.99549085,0.00025431873,0.00006105873,0.0013032331],"study_design_scores_gemma":[0.00005032731,0.00034804654,0.11223572,0.000024485249,0.000047660033,0.0011238836,0.000955015,0.0018391648,0.87758934,0.00022052681,0.005549744,0.000016011956],"about_ca_topic_score_codex":0.0007626343,"about_ca_topic_score_gemma":0.0012029352,"teacher_disagreement_score":0.001287262,"about_ca_system_score_codex":0.00027532582,"about_ca_system_score_gemma":0.0001428456,"threshold_uncertainty_score":0.004306257},"labels":[],"label_agreement":null},{"id":"W139278219","doi":"10.1055/s-2003-39477","title":"Endothelial Cell Specific Molecule-1 - A Newly Identified Protein in Adipocytes","year":2003,"lang":"en","type":"article","venue":"Hormone and Metabolic Research","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Adipose tissue; Internal medicine; Endocrinology; Retinoic acid; Activator (genetics); Inflammation; Adipocyte; Receptor; Biology; Adipogenesis; Chemistry; Protein kinase C; Molecular biology; Cell culture; Kinase; Cell biology; Medicine","score_opus":0.03951925992061455,"score_gpt":0.2831833919514568,"score_spread":0.24366413203084225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W139278219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9384605,0.03734176,0.016768873,0.00038201807,0.00028686228,0.000089150155,0.001308777,0.00020367264,0.0051582623],"genre_scores_gemma":[0.96822673,0.009840955,0.0095526045,0.00018979277,0.00014405388,0.00008821353,0.0025566837,0.000024678298,0.0093763275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999933,0.000007847675,0.000004044332,0.00002873946,0.00001468767,0.000011630787],"domain_scores_gemma":[0.99993587,0.000008289278,0.000020215084,0.0000042835495,0.000014598783,0.000016721458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009272091,0.00024298832,0.00015712836,0.00038684314,0.00013645635,0.00026790035,0.00018558533,0.00024842093,0.0011399037],"category_scores_gemma":[0.000107559106,0.00012331788,0.00020724506,0.00023601178,0.00013148952,0.00024421045,0.00019839179,0.00038790243,0.0003907085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015036885,0.000027096108,0.0017097519,0.00014281663,0.000015716161,0.00073790876,0.000044584292,0.00004429564,0.98774904,0.00064859784,0.00019045423,0.008539512],"study_design_scores_gemma":[0.00010873215,0.0008006636,0.12435164,0.00012832823,0.00018069847,0.016811896,0.00019381271,0.0028316502,0.7754976,0.0017524855,0.07730241,0.00004013276],"about_ca_topic_score_codex":0.00013533303,"about_ca_topic_score_gemma":0.00014360699,"teacher_disagreement_score":0.0011399037,"about_ca_system_score_codex":0.00015880966,"about_ca_system_score_gemma":0.00009186687,"threshold_uncertainty_score":0.003813386},"labels":[],"label_agreement":null},{"id":"W1556466454","doi":"10.4049/jimmunol.192.supp.203.4","title":"Increased lung/liver metastasis of human breast cancer cells in NOD.SCIDIL2rγ-/- mice after treatment with soluble CD200Fc (TUM7P.922)","year":2014,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Metastasis; Breast cancer; Medicine; Nod; Cancer research; CA 15-3; Cancer; Pathology; Lymph; Lung cancer; CA15-3; Internal medicine; Endocrinology","score_opus":0.008076798110073082,"score_gpt":0.2150655317256765,"score_spread":0.2069887336156034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1556466454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99139726,0.0009996187,0.0010788245,0.00029766187,0.00004998868,0.000110239984,0.0035849123,0.00024833705,0.0022330785],"genre_scores_gemma":[0.9724228,0.0010859001,0.0021174708,0.0002794405,0.000039479026,0.00033892898,0.0058255815,0.00010681511,0.017783599],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960786,0.000044949153,0.000037821683,0.00011481037,0.0000994054,0.0000952714],"domain_scores_gemma":[0.99971825,0.00002573774,0.000090833804,0.000034576784,0.000024509216,0.00010603245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028381354,0.0009877096,0.000566072,0.00086167455,0.00028643679,0.00047427186,0.00028700125,0.00078759907,0.005559112],"category_scores_gemma":[0.00010891155,0.0003654651,0.0006433489,0.00038413238,0.00037325258,0.00030612544,0.00030195806,0.0012940944,0.0015409946],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040089164,0.00015802021,0.0002325373,0.000033071447,0.000008111891,0.00008554822,0.000019971043,0.00004098468,0.9984334,0.00003857244,0.00007842856,0.000470568],"study_design_scores_gemma":[0.000188756,0.0026631574,0.009837711,0.000020946703,0.000049547216,0.00119603,0.00010933855,0.00082503207,0.9826972,0.000057143312,0.0023424122,0.000012682036],"about_ca_topic_score_codex":0.0010841107,"about_ca_topic_score_gemma":0.001328622,"teacher_disagreement_score":0.005559112,"about_ca_system_score_codex":0.0005190977,"about_ca_system_score_gemma":0.00023364075,"threshold_uncertainty_score":0.018597126},"labels":[],"label_agreement":null},{"id":"W1735276770","doi":"10.14814/phy2.12497","title":"Local chemerin levels are positively associated with DSS-induced colitis but constitutive loss of CMKLR1 does not protect against development of colitis","year":2015,"lang":"en","type":"article","venue":"Physiological Reports","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Chemerin; Colitis; Medicine; Inflammatory bowel disease; Inflammation; Immunology; Proinflammatory cytokine; Ulcerative colitis; Chemokine; Internal medicine; Disease; Adipokine","score_opus":0.05354637541449339,"score_gpt":0.252788682246708,"score_spread":0.19924230683221458,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1735276770","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99527377,0.001844295,0.0012300295,0.0002000463,0.00004169492,0.00001935286,0.0005754623,0.00015592435,0.00065951317],"genre_scores_gemma":[0.9936009,0.00079129584,0.0013591789,0.0001373433,0.000017804701,0.000042014286,0.00081534754,0.00005486834,0.0031812466],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99957854,0.000057497487,0.000050507635,0.00013025501,0.000077652745,0.00010552699],"domain_scores_gemma":[0.99891376,0.00005298859,0.0005240003,0.00007177757,0.00004904487,0.00038852388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019163858,0.00045367432,0.00064590253,0.0004318951,0.00013263217,0.00046810717,0.0002396912,0.00055324694,0.0019867434],"category_scores_gemma":[0.00021797878,0.00027140058,0.00035077502,0.00019910432,0.00038105025,0.00036026878,0.00023742285,0.001596153,0.00053590693],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000616591,0.00006549509,0.00058314786,0.00004206683,0.000011486817,0.00006635762,0.000012709789,0.000028017472,0.9977405,0.0000269353,0.000034990826,0.0007716247],"study_design_scores_gemma":[0.00010907671,0.0026282026,0.075917654,0.00004127883,0.00010125923,0.0019324658,0.00014113018,0.0009581753,0.9154522,0.000105338135,0.0025852595,0.000027924714],"about_ca_topic_score_codex":0.00030021768,"about_ca_topic_score_gemma":0.00045956185,"teacher_disagreement_score":0.0019867434,"about_ca_system_score_codex":0.00028642503,"about_ca_system_score_gemma":0.00020509447,"threshold_uncertainty_score":0.006646335},"labels":[],"label_agreement":null},{"id":"W1794617724","doi":"10.1016/j.envres.2015.09.030","title":"Chronic pulmonary accumulation of iron oxide nanoparticles induced Th1-type immune response stimulating the function of antigen-presenting cells","year":2015,"lang":"en","type":"article","venue":"Environmental Research","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Ministry of Education, Science and Technology; National Research Foundation of Korea","keywords":"CD80; Immune system; CD86; Antigen; Immunology; Antigen presentation; Chemokine; Antigen-presenting cell; Chemistry; Medicine; Cytotoxic T cell; CD40; T cell; In vitro","score_opus":0.11460145291002057,"score_gpt":0.3395621687888187,"score_spread":0.22496071587879812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1794617724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962459,0.0010979815,0.0015809101,0.00012779319,0.0000728163,0.000027875181,0.000046651523,0.000036350473,0.00076380075],"genre_scores_gemma":[0.9972972,0.00024584998,0.000494793,0.0000830173,0.00003945257,0.000019863252,0.00006579221,0.0000060143843,0.001748003],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984825,0.000027323767,0.0000085805295,0.00002942939,0.0000323552,0.00005413296],"domain_scores_gemma":[0.9998814,0.00002150311,0.000027932647,0.000014915238,0.00002383187,0.00003044624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019482615,0.00029303515,0.0003259774,0.00017677734,0.00016617579,0.0002558988,0.00012151546,0.0004583887,0.0014893784],"category_scores_gemma":[0.00013699585,0.00013327747,0.00022076817,0.00006757871,0.00029406676,0.00021908643,0.00017700807,0.0005608289,0.00024010522],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011737021,0.00012625051,0.00079269294,0.000062470834,0.00000667934,0.0002552309,0.00003761436,0.000033572367,0.9953134,0.00006689996,0.00009142981,0.0020401566],"study_design_scores_gemma":[0.0001006246,0.002496799,0.016949203,0.000021025768,0.00005538886,0.0008482589,0.0001339159,0.0015758532,0.97554123,0.00022476561,0.0020435099,0.0000094771],"about_ca_topic_score_codex":0.00034166226,"about_ca_topic_score_gemma":0.000527721,"teacher_disagreement_score":0.0014893784,"about_ca_system_score_codex":0.00021866239,"about_ca_system_score_gemma":0.00022765812,"threshold_uncertainty_score":0.0049824715},"labels":[],"label_agreement":null},{"id":"W1991740603","doi":"10.1055/s-2006-924973","title":"Adipose Tissue and Circulating Endothelial Cell Specific Molecule-1 in Human Obesity","year":2006,"lang":"en","type":"article","venue":"Hormone and Metabolic Research","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Adipose tissue; Internal medicine; Endocrinology; Adipocyte; Insulin resistance; Gene expression; Adipose tissue macrophages; Biology; Insulin; White adipose tissue; Medicine; Gene","score_opus":0.030339780870760474,"score_gpt":0.28855076011242303,"score_spread":0.2582109792416626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1991740603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924272,0.006433948,0.00032341556,0.000063905085,0.000011305205,0.000006148761,0.00008750648,0.0000059670165,0.00064063526],"genre_scores_gemma":[0.9967649,0.0018377167,0.00047376176,0.000039689796,0.000019974554,0.000010309324,0.00016046996,0.0000022265815,0.00069099205],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99993634,0.000015311356,0.0000052605137,0.000014504286,0.000016103526,0.000012479482],"domain_scores_gemma":[0.9999049,0.000019455003,0.000041273182,0.000005768003,0.00001061058,0.000018052338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017099926,0.00014961511,0.000107805645,0.00038336744,0.00011153795,0.00019113984,0.00009146731,0.00015906275,0.0010329079],"category_scores_gemma":[0.00031595008,0.00011646334,0.00007531612,0.0003486596,0.00012700452,0.00011199676,0.00013406889,0.00026980898,0.00014722582],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027637007,0.0002835869,0.76654583,0.00019718813,0.00012785227,0.0016089699,0.00032748285,0.0002784337,0.16335244,0.000637449,0.0006053735,0.063271545],"study_design_scores_gemma":[0.000034129098,0.0004298769,0.9889231,0.000015452915,0.000058774523,0.0028388035,0.00008974309,0.0002537966,0.0052323495,0.0001869463,0.0019315187,0.0000056554472],"about_ca_topic_score_codex":0.00065545423,"about_ca_topic_score_gemma":0.00063506863,"teacher_disagreement_score":0.0010329079,"about_ca_system_score_codex":0.00012365205,"about_ca_system_score_gemma":0.00009863039,"threshold_uncertainty_score":0.00345546},"labels":[],"label_agreement":null},{"id":"W2005287515","doi":"10.1016/j.febslet.2007.02.029","title":"Effects of aging on triggering receptor expressed on myeloid cells (TREM)‐1‐induced PMN functions","year":2007,"lang":"en","type":"article","venue":"FEBS Letters","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Receptor; Degranulation; Respiratory burst; Chemotaxis; Signal transduction; Immunology; Cell biology; Phagocytosis; Inflammation; Granulocyte; Biology; Chemistry; Biochemistry","score_opus":0.009400058963276267,"score_gpt":0.20547563731469606,"score_spread":0.1960755783514198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005287515","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99820733,0.0012075836,0.00013299042,0.00003326375,0.000020834193,0.000008312631,0.00010329902,0.0000064858477,0.00027992768],"genre_scores_gemma":[0.9977926,0.0008308619,0.00030358668,0.00009497441,0.000024573304,0.000018780462,0.00020412932,0.0000048460806,0.00072564714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984586,0.00004992327,0.000020419453,0.000019090143,0.000019182155,0.000045584587],"domain_scores_gemma":[0.99978524,0.0000397632,0.00005025605,0.000030164027,0.000029294868,0.00006521118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003473945,0.00034115612,0.00039561288,0.000117824784,0.00010086133,0.00017742172,0.00008056337,0.00017481048,0.0011289185],"category_scores_gemma":[0.0003872431,0.00009996167,0.00021757472,0.000087623324,0.00015924516,0.00021654282,0.0002580047,0.00032336495,0.00017631624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0063885357,0.00024763992,0.0024325447,0.00012567494,0.00002434998,0.00040221366,0.0001055644,0.00008928463,0.9838223,0.00010920744,0.00014260787,0.006110068],"study_design_scores_gemma":[0.00018842179,0.014822488,0.12788258,0.000033500863,0.00015238329,0.001508871,0.0002323652,0.0009181304,0.85005844,0.00019958956,0.003978376,0.000024827159],"about_ca_topic_score_codex":0.00022344703,"about_ca_topic_score_gemma":0.00020725314,"teacher_disagreement_score":0.0011289185,"about_ca_system_score_codex":0.00010137189,"about_ca_system_score_gemma":0.00010314037,"threshold_uncertainty_score":0.00377661},"labels":[],"label_agreement":null},{"id":"W2007180017","doi":"10.1016/s1569-1993(09)60204-6","title":"Neutrophil Extracellular Traps impair the inhibition of elastase, protease 3 and cathepsin G in neutrophil suspensions from CF patients","year":2009,"lang":"en","type":"article","venue":"Journal of Cystic Fibrosis","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Neutrophil extracellular traps; Neutrophil elastase; Medicine; Cathepsin G; Elastase; Cystic fibrosis; Protease; Extracellular; Cathepsin S; Microbiology; Protease inhibitor (pharmacology); Cathepsin L1; Immunology; Cathepsin D; Enzyme; Internal medicine; Biochemistry; Inflammation; Biology; Virus; Viral load","score_opus":0.006334202507165586,"score_gpt":0.19534378639395764,"score_spread":0.18900958388679204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007180017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9972475,0.0010160017,0.0006919077,0.00021254836,0.000072187635,0.000024111714,0.000307291,0.000020853284,0.0004075256],"genre_scores_gemma":[0.998123,0.00027339996,0.00028691694,0.00011206699,0.000022909255,0.000022547929,0.00037326445,0.000004003922,0.0007818621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997273,0.00005254163,0.000038397113,0.000036728554,0.00006983468,0.00007522229],"domain_scores_gemma":[0.9997423,0.00008529078,0.000050136707,0.000021659822,0.000033170305,0.00006735362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035066903,0.0003605696,0.0005477593,0.00022334012,0.0001974277,0.0003777274,0.00019387106,0.0006352657,0.0029908274],"category_scores_gemma":[0.0007114625,0.00018892676,0.00024021992,0.000107622815,0.00022737308,0.00021475625,0.00020731361,0.0008150152,0.0003947404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038447673,0.00021482729,0.0036920346,0.00012533716,0.000052071915,0.0009877513,0.00009554801,0.0001180966,0.985584,0.00012262641,0.00057494297,0.004587939],"study_design_scores_gemma":[0.0005598634,0.0049522715,0.08376328,0.000044813874,0.00019473296,0.0069230134,0.00028297646,0.0023780959,0.89817595,0.00026534067,0.0024315391,0.000028089631],"about_ca_topic_score_codex":0.0006759147,"about_ca_topic_score_gemma":0.00063200854,"teacher_disagreement_score":0.0029908274,"about_ca_system_score_codex":0.0001428023,"about_ca_system_score_gemma":0.00022043478,"threshold_uncertainty_score":0.010005355},"labels":[],"label_agreement":null},{"id":"W2007479640","doi":"10.1016/j.jss.2007.04.043","title":"Peptides of CD200 Modulate LPS-Induced TNF-α Induction and Mortality In Vivo","year":2007,"lang":"en","type":"article","venue":"Journal of Surgical Research","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Canadian Institutes of Health Research","keywords":"In vivo; Tumor necrosis factor alpha; Inflammation; Agonist; Lipopolysaccharide; Receptor; Myeloid; Immunology; Gene isoform; Biology; Arthritis; Pharmacology; Cell biology; Cancer research; Biochemistry","score_opus":0.09914479185008504,"score_gpt":0.3799338951272961,"score_spread":0.28078910327721107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2007479640","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99792695,0.00045071138,0.00066944334,0.00009772131,0.00006805937,0.000033383858,0.00013286993,0.000041197236,0.0005797233],"genre_scores_gemma":[0.996473,0.00052794913,0.0008696419,0.00015058636,0.00007742752,0.00007178906,0.00048812295,0.000012982302,0.0013284062],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997938,0.000040122257,0.000015412965,0.000022787186,0.000029434328,0.00009841075],"domain_scores_gemma":[0.99972194,0.00003989176,0.00005743942,0.000028459099,0.000022530376,0.00012977904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026185755,0.0005967049,0.00047490295,0.00030452444,0.00020083462,0.00043214552,0.00020991793,0.00060138124,0.0015524685],"category_scores_gemma":[0.00029464794,0.00023667878,0.0003249395,0.00017235597,0.00032162905,0.0005037844,0.00020488634,0.0020169136,0.0006657759],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012903926,0.0019357217,0.00057061773,0.000073498275,0.00002512567,0.00009725403,0.000035806537,0.00024458853,0.97897345,0.0001316334,0.0002094306,0.004799008],"study_design_scores_gemma":[0.001311541,0.024041088,0.011891071,0.000036541787,0.00010469072,0.00053461693,0.00013103076,0.0027798612,0.95735896,0.0003637623,0.0014231455,0.000023830587],"about_ca_topic_score_codex":0.00016011775,"about_ca_topic_score_gemma":0.00020254114,"teacher_disagreement_score":0.0015524685,"about_ca_system_score_codex":0.00021106309,"about_ca_system_score_gemma":0.00033755804,"threshold_uncertainty_score":0.0051935315},"labels":[],"label_agreement":null},{"id":"W2019892997","doi":"10.1016/j.jinf.2007.01.010","title":"Soluble triggering receptor expressed on myeloid cells-1 is not a sufficient biological marker for infection of the urinary tract","year":2007,"lang":"en","type":"letter","venue":"Journal of Infection","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Pneumonia; Myeloid; Sepsis; Medicine; Myeloid cells; Biomarker; Intensive care; Internal medicine; Immunology; Biology; Genetics","score_opus":0.03261860467937159,"score_gpt":0.24878851484971462,"score_spread":0.21616991017034304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2019892997","genre_codex":"empirical","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59920317,0.008822284,0.0028927855,0.33571124,0.02617722,0.000111958674,0.00037368407,0.00020741939,0.026500266],"genre_scores_gemma":[0.8985192,0.0038527308,0.0016819412,0.051203523,0.035322573,0.00007391918,0.00021850209,0.000046722926,0.009080812],"study_design_codex":"case_report","study_design_gemma":"not_applicable","domain_scores_codex":[0.99958426,0.00014484992,0.00005419738,0.00005073226,0.00007941187,0.00008660782],"domain_scores_gemma":[0.99781895,0.0015744934,0.00014254596,0.00011794755,0.00018732919,0.00015873939],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048809877,0.00032603674,0.0009700403,0.0002550655,0.00039628116,0.0007957337,0.000462902,0.0050012474,0.0031490552],"category_scores_gemma":[0.0043524667,0.0002241106,0.0002748244,0.00017449592,0.0008263375,0.00063981494,0.00023968433,0.002909737,0.0009791123],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0086375605,0.0011989258,0.076863706,0.0015696136,0.00023642452,0.39584392,0.0012546182,0.0006115454,0.10534718,0.011754484,0.2774198,0.11926221],"study_design_scores_gemma":[0.0016278343,0.0038207606,0.11277569,0.0006519386,0.00037114654,0.50482696,0.002045639,0.009166563,0.061970934,0.02023236,0.2822536,0.00025647908],"about_ca_topic_score_codex":0.0001588619,"about_ca_topic_score_gemma":0.00023719047,"teacher_disagreement_score":0.0050012474,"about_ca_system_score_codex":0.00048508644,"about_ca_system_score_gemma":0.00024361648,"threshold_uncertainty_score":0.010534644},"labels":[],"label_agreement":null},{"id":"W2020844712","doi":"10.1097/00007890-200407271-01603","title":"USE OF CD200-TRANSGENIC MICE AND DECOY CD200R TO DEFINE ROLE OF CD200:CD200R IN ALLOREJECTION","year":2004,"lang":"en","type":"article","venue":"Transplantation","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Doxycycline; Transgene; Biology; Molecular biology; Genetically modified mouse; Spleen; Gene; Immunology; Microbiology; Genetics","score_opus":0.014098138626212179,"score_gpt":0.2123614476715726,"score_spread":0.19826330904536044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020844712","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9576345,0.0022761652,0.025864027,0.0007239911,0.00034854593,0.001143993,0.002818786,0.0013723504,0.007817716],"genre_scores_gemma":[0.9176608,0.0021741877,0.043717474,0.0005578107,0.00015180916,0.0019138069,0.004897701,0.0007984952,0.028127834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878746,0.0001399311,0.00015055442,0.00041745824,0.00026603762,0.00023866865],"domain_scores_gemma":[0.9992993,0.00013021451,0.00020049716,0.00011555152,0.000048922222,0.00020552329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008022709,0.0011721004,0.0008342054,0.0015998487,0.00061026623,0.00095751975,0.0010517837,0.002128729,0.0048720757],"category_scores_gemma":[0.000283038,0.000585591,0.000799608,0.0005030806,0.00075477635,0.0008275739,0.000671561,0.0036216183,0.0025246295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001483864,0.00025179732,0.00007598688,0.000036716337,0.0000064192823,0.00009031568,0.000030633008,0.000058339,0.99785775,0.00037728722,0.00010816013,0.0009582466],"study_design_scores_gemma":[0.00016962494,0.00091090647,0.0011125304,0.00002380535,0.000035954916,0.0009423608,0.00003248064,0.001731963,0.98928446,0.00011836727,0.0056230295,0.0000146154525],"about_ca_topic_score_codex":0.00041453756,"about_ca_topic_score_gemma":0.000837502,"teacher_disagreement_score":0.0048720757,"about_ca_system_score_codex":0.0006940263,"about_ca_system_score_gemma":0.00035306733,"threshold_uncertainty_score":0.01629877},"labels":[],"label_agreement":null},{"id":"W2032132964","doi":"10.1007/s10549-010-1259-3","title":"Role of CD200 expression in regulation of metastasis of EMT6 tumor cells in mice","year":2010,"lang":"en","type":"article","venue":"Breast Cancer Research and Treatment","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Juravinski Cancer Centre; Toronto General Hospital; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Biology; Metastasis; Lymph; Cytotoxic T cell; Immune system; Cancer research; Ectopic expression; Nod; Tumor progression; Genetically modified mouse; Breast cancer; Mammary tumor; Immunology; Cell culture; Transgene; Cancer; Pathology; Endocrinology; Medicine; In vitro; Gene","score_opus":0.020645975451165748,"score_gpt":0.2931483030660704,"score_spread":0.27250232761490467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2032132964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9924259,0.0010131444,0.0021309594,0.0003732539,0.00004119243,0.000029203791,0.00084336154,0.00021542204,0.0029275767],"genre_scores_gemma":[0.98954004,0.00049631053,0.0016249823,0.00013855148,0.000017910008,0.000037413378,0.00062225707,0.000055355482,0.0074671954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99973816,0.00003508828,0.000017107495,0.00005064928,0.000061690356,0.00009715628],"domain_scores_gemma":[0.9997482,0.000021913429,0.000084521074,0.000027952266,0.000022600843,0.00009477808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000163545,0.0003527857,0.00025687195,0.00091008167,0.0002343576,0.000534474,0.00025285123,0.0005499814,0.0026595022],"category_scores_gemma":[0.0001367201,0.00024558435,0.00031223605,0.00020827235,0.00032964887,0.00036909984,0.00019059044,0.0014999191,0.0006673539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006543132,0.000108766275,0.00039430702,0.00001870452,0.0000043189016,0.000081693855,0.0000121452795,0.000059802944,0.9965396,0.0003227159,0.000089166395,0.0017144742],"study_design_scores_gemma":[0.000052360796,0.00046419012,0.006387937,0.000006920737,0.00002345582,0.00035721043,0.000050053204,0.0011457888,0.9891803,0.00023463035,0.0020895288,0.0000076200085],"about_ca_topic_score_codex":0.0006266049,"about_ca_topic_score_gemma":0.0009068396,"teacher_disagreement_score":0.0026595022,"about_ca_system_score_codex":0.0005453671,"about_ca_system_score_gemma":0.0002515506,"threshold_uncertainty_score":0.008896887},"labels":[],"label_agreement":null},{"id":"W2033950724","doi":"10.1016/s0002-9440(10)63915-6","title":"Modulation of Hepatic Granulomatous Responses by Transgene Expression of DAP12 or TREM-1-Ig Molecules","year":2003,"lang":"en","type":"article","venue":"American Journal Of Pathology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Ministry of Education, Culture, Sports, Science and Technology","keywords":"Transgene; Biology; Modulation (music); Gene; Genetics; Physics","score_opus":0.011199270681103638,"score_gpt":0.24192525452889632,"score_spread":0.2307259838477927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2033950724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938002,0.00072393945,0.00274851,0.00020837945,0.00009250099,0.000060545033,0.00036011712,0.00020423408,0.00180146],"genre_scores_gemma":[0.99401736,0.00035716788,0.0025311892,0.000064453976,0.000029335548,0.000084006926,0.0002804983,0.000038141854,0.002597801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99954695,0.000080218626,0.0000474051,0.000082903825,0.000066791814,0.00017564135],"domain_scores_gemma":[0.9996233,0.00007962898,0.00008643298,0.00005446458,0.000028771852,0.00012746901],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034411115,0.0006724406,0.00040922264,0.00045865925,0.00024222615,0.0005354829,0.00027414085,0.00049988466,0.0021755188],"category_scores_gemma":[0.00025781879,0.0002910724,0.00039269918,0.00022432739,0.00054668146,0.00040664402,0.00028869533,0.0020664956,0.0007588519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073601084,0.0001367486,0.00014752723,0.00006196275,0.000006551749,0.00008112091,0.00003123159,0.0001088633,0.99696356,0.00018765725,0.000052257397,0.0014865219],"study_design_scores_gemma":[0.00010214727,0.0007828374,0.0017845279,0.000009331429,0.00002727422,0.00015749148,0.000058407048,0.0012956256,0.9949209,0.000077599194,0.0007782227,0.000005679642],"about_ca_topic_score_codex":0.00036559,"about_ca_topic_score_gemma":0.00074054196,"teacher_disagreement_score":0.0021755188,"about_ca_system_score_codex":0.0004986,"about_ca_system_score_gemma":0.00028728214,"threshold_uncertainty_score":0.0072777867},"labels":[],"label_agreement":null},{"id":"W2035542598","doi":"10.1159/000334169","title":"Regulation of Experimental Peritonitis: A Complex Orchestration","year":2012,"lang":"en","type":"review","venue":"Nephron Experimental Nephrology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Peritonitis; Inflammation; Orchestration; Peritoneal cavity; Peritoneal dialysis; Medicine; Immunology; Biology; Bioinformatics; Internal medicine; Surgery","score_opus":0.07905817461263889,"score_gpt":0.3213946357606135,"score_spread":0.2423364611479746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2035542598","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00091681286,0.99608743,0.0008897239,0.00026347322,0.00024699498,0.000013870187,0.000028692673,0.00001976298,0.0015332962],"genre_scores_gemma":[0.003031608,0.99539596,0.0006512851,0.00015175498,0.00014665652,0.000019343868,0.000042462645,0.000002583015,0.00055828894],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999795,0.00004412128,0.000026397503,0.00003561188,0.0000788183,0.000020162914],"domain_scores_gemma":[0.999828,0.000062221545,0.00003483629,0.000008966361,0.00004502522,0.000020935595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044898683,0.00066884066,0.0010323633,0.000866468,0.00016398863,0.0007032948,0.00053508335,0.00066366163,0.0009790005],"category_scores_gemma":[0.00028101064,0.00013096235,0.00026741117,0.00071139476,0.00047548048,0.0006827836,0.00047081278,0.0009851664,0.0007659606],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012938314,0.0001307775,0.00047994388,0.01360489,0.000079621284,0.0004444571,0.00009297297,0.0003262739,0.038475312,0.005668569,0.00994365,0.9306242],"study_design_scores_gemma":[0.000028732222,0.00054602884,0.00479453,0.002726855,0.00015188912,0.0053082914,0.00015578375,0.00019803918,0.021247445,0.003971094,0.96082395,0.000047348436],"about_ca_topic_score_codex":0.0002602172,"about_ca_topic_score_gemma":0.00038789984,"teacher_disagreement_score":0.0010323633,"about_ca_system_score_codex":0.0003662785,"about_ca_system_score_gemma":0.0006484406,"threshold_uncertainty_score":0.0032750964},"labels":[],"label_agreement":null},{"id":"W2036514375","doi":"10.1038/ki.2014.205","title":"TREM-1 regulates macrophage polarization in ureteral obstruction","year":2014,"lang":"en","type":"article","venue":"Kidney International","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":61,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Macrophage polarization; Medicine; Macrophage; Ureter; Urology; Chemistry; Biochemistry","score_opus":0.005362589128023708,"score_gpt":0.20470192561434128,"score_spread":0.19933933648631758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2036514375","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9959894,0.0018921428,0.0007203798,0.00024053696,0.000054985285,0.00001533045,0.000071427254,0.00002727634,0.0009885711],"genre_scores_gemma":[0.9977476,0.0006095302,0.00034024127,0.000058920792,0.00002936235,0.00001727077,0.000072579984,0.000005038923,0.0011193173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99964666,0.00009444464,0.00002687368,0.00003492576,0.00007183777,0.0001251668],"domain_scores_gemma":[0.99979657,0.0000132296655,0.00006943043,0.000015050682,0.000023688888,0.000082007304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047330288,0.0002597148,0.0003419526,0.00040379842,0.00040654713,0.00060046,0.00025729428,0.0004400612,0.0016554688],"category_scores_gemma":[0.00033005927,0.00021883362,0.00043286104,0.0001436682,0.00048748706,0.00038291453,0.00071938423,0.0010181066,0.0004101498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00462042,0.00048180943,0.018562807,0.00040250432,0.00006642579,0.0017456199,0.00026647432,0.00033218387,0.95779663,0.0011442957,0.00071760034,0.013863223],"study_design_scores_gemma":[0.00037603214,0.0039117457,0.47712052,0.00020718103,0.0003174162,0.0050424077,0.0025801435,0.005775793,0.49062535,0.002462893,0.0115104,0.00007022134],"about_ca_topic_score_codex":0.00015005516,"about_ca_topic_score_gemma":0.00026516203,"teacher_disagreement_score":0.0016554688,"about_ca_system_score_codex":0.0002359965,"about_ca_system_score_gemma":0.00041048895,"threshold_uncertainty_score":0.0055380464},"labels":[],"label_agreement":null},{"id":"W2039781208","doi":"10.1186/2197-425x-2-s1-p37","title":"0593. Reelin mediates the human neutrophil peptide-induced endothelial dysfunction and platelet aggregation","year":2014,"lang":"en","type":"article","venue":"Intensive Care Medicine Experimental","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Medicine; Platelet; Platelet aggregation; Endothelial dysfunction; Peptide; Platelet activation; Immunology; Internal medicine; Biochemistry; Biology","score_opus":0.01625982589450199,"score_gpt":0.25676912465762597,"score_spread":0.240509298763124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2039781208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96998674,0.011591778,0.0063620405,0.0011150457,0.00033911824,0.00027486318,0.0022259194,0.00034668707,0.007757847],"genre_scores_gemma":[0.9860719,0.0038978683,0.0023903877,0.00067312643,0.00016134886,0.00018672973,0.0018418495,0.000045368703,0.0047314265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996493,0.00010780021,0.000026900316,0.00004085879,0.0000712251,0.00010387491],"domain_scores_gemma":[0.9998839,0.000015728376,0.000032891698,0.000016776541,0.000011227609,0.000039517647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038825613,0.0008212896,0.00058583217,0.00033735108,0.00026766496,0.0005587653,0.0005649337,0.0008633931,0.0047876476],"category_scores_gemma":[0.0002679558,0.00024764266,0.0005917986,0.00018419932,0.00031085167,0.00030303176,0.0003214436,0.0013648701,0.0025874686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0027068611,0.00054963335,0.0006169242,0.00024031484,0.0000729822,0.0011057575,0.00006470478,0.0002441779,0.9839167,0.0008331821,0.0018255733,0.007823204],"study_design_scores_gemma":[0.001086086,0.0065369266,0.04864993,0.00017035352,0.00027684643,0.006577432,0.00025075141,0.0039323145,0.9043683,0.0010357924,0.027063888,0.000051471136],"about_ca_topic_score_codex":0.000846331,"about_ca_topic_score_gemma":0.0009048135,"teacher_disagreement_score":0.0047876476,"about_ca_system_score_codex":0.00042377063,"about_ca_system_score_gemma":0.000252912,"threshold_uncertainty_score":0.016016304},"labels":[],"label_agreement":null},{"id":"W2065486937","doi":"10.1016/s1873-9946(14)50002-5","title":"O-04: Secretory leukocyte protease inhibitor (SLPI) is a potent regulator of microbial induced monocyte activation and intestinal inflammation","year":2014,"lang":"en","type":"article","venue":"Journal of Crohn s and Colitis","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"SLPI; Regulator; Monocyte; Inflammation; Protease inhibitor (pharmacology); Chemistry; Cell biology; Immunology; Biology; Biochemistry; Virus","score_opus":0.012523857212582836,"score_gpt":0.21662317744291207,"score_spread":0.20409932023032923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2065486937","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98803604,0.0072892536,0.0016409847,0.0004097748,0.00009352787,0.00002680858,0.00032018527,0.000085524014,0.0020978248],"genre_scores_gemma":[0.99140465,0.002872958,0.0013102781,0.00021797455,0.00007098531,0.000031848213,0.00055487064,0.000029491013,0.003506857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99980515,0.00004167398,0.000015904467,0.00004272686,0.000049607017,0.00004502861],"domain_scores_gemma":[0.9998191,0.000013780963,0.00008042333,0.000010210716,0.00001257567,0.000063838954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018752222,0.00057463883,0.00020696661,0.00022220482,0.00016793786,0.00044079003,0.00016804325,0.0002789733,0.0016565725],"category_scores_gemma":[0.00022095116,0.0001742294,0.00024608124,0.00011771249,0.000284442,0.000171252,0.0003083475,0.0005695302,0.0005550827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017284229,0.00009934669,0.004715517,0.0000779735,0.00002120879,0.00064320053,0.000028107428,0.00004376258,0.982186,0.00013909256,0.00054997986,0.009767415],"study_design_scores_gemma":[0.00039667767,0.0043758336,0.21766354,0.00008097817,0.00015405165,0.009694486,0.00028614144,0.0018048016,0.74048865,0.0004032197,0.02462196,0.000029625402],"about_ca_topic_score_codex":0.00043341887,"about_ca_topic_score_gemma":0.00039168613,"teacher_disagreement_score":0.0016565725,"about_ca_system_score_codex":0.0002990105,"about_ca_system_score_gemma":0.0002764946,"threshold_uncertainty_score":0.005541742},"labels":[],"label_agreement":null},{"id":"W2072605160","doi":"10.1016/j.exger.2008.05.001","title":"A role for altered TLR gene expression in association with increased expression of CD200R in the induction of mucosal tissue CD4+ Treg in aged mice following gavage with a liver extract along with intramuscular monophosphoryl lipid A (MPLA) injection","year":2008,"lang":"en","type":"article","venue":"Experimental Gerontology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"Prairie Research Institute","keywords":"FOXP3; Biology; Immunology; IL-2 receptor; Gene expression; Effector; Function (biology); Gene; Cell biology; Immune system; T cell; Genetics","score_opus":0.015321183326025726,"score_gpt":0.23879491780156104,"score_spread":0.2234737344755353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2072605160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99762946,0.000806323,0.0007583168,0.000092079266,0.0000249596,0.0000095829,0.0002779082,0.00005227899,0.0003492143],"genre_scores_gemma":[0.99605334,0.00032500245,0.00084026036,0.0000710719,0.000019692428,0.000032665725,0.00021097227,0.000012409867,0.0024345818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986625,0.00001875052,0.000017657201,0.000037156635,0.000018951436,0.00004119231],"domain_scores_gemma":[0.99977297,0.000020640096,0.00008256581,0.000026116373,0.000021581121,0.00007610616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017735272,0.0003689934,0.00036608038,0.0004210235,0.00013149052,0.00023259986,0.00017824853,0.000458226,0.0020281815],"category_scores_gemma":[0.00015411469,0.00021351285,0.00025484018,0.00013679678,0.00031378213,0.0002858009,0.00015516041,0.00068956095,0.00030798608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00081467343,0.000039787443,0.000615173,0.000020881482,0.000003840467,0.00009148672,0.0000124944345,0.000009119007,0.9977488,0.00002930417,0.000016881157,0.0005975965],"study_design_scores_gemma":[0.0000710271,0.0019996073,0.0689708,0.000013464011,0.00007928089,0.0009667186,0.0001329228,0.00038816128,0.9262338,0.00013470376,0.0009979445,0.0000115688645],"about_ca_topic_score_codex":0.00036892924,"about_ca_topic_score_gemma":0.0005757781,"teacher_disagreement_score":0.0020281815,"about_ca_system_score_codex":0.00017665584,"about_ca_system_score_gemma":0.00014268904,"threshold_uncertainty_score":0.006784916},"labels":[],"label_agreement":null},{"id":"W2079958878","doi":"10.1111/j.1471-4159.2009.06130.x","title":"The surface‐exposed chaperone, Hsp60, is an agonist of the microglial TREM2 receptor","year":2009,"lang":"en","type":"article","venue":"Journal of Neurochemistry","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":150,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"National Academy of Sciences of Ukraine","keywords":"TREM2; Cell biology; Biology; Microglia; Receptor; HSP60; Heat shock protein; Chaperone (clinical); Immunology; Biochemistry; Inflammation; Hsp70; Medicine; Pathology","score_opus":0.014011714825742596,"score_gpt":0.2205855575151297,"score_spread":0.2065738426893871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2079958878","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9937914,0.0029937462,0.0013387067,0.00009039852,0.00004247497,0.000022920805,0.00021803576,0.000041812033,0.0014605256],"genre_scores_gemma":[0.99573743,0.0010969319,0.00070730364,0.00006100267,0.000020121264,0.000021831804,0.0005083103,0.0000053189283,0.0018416722],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99990964,0.00002049091,0.0000063485263,0.0000151275035,0.000022923006,0.000025490966],"domain_scores_gemma":[0.99996626,0.000004183619,0.0000075238872,0.000002854542,0.0000042447496,0.000014855006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008757521,0.0003057795,0.00023506276,0.000084830936,0.00013600288,0.00014292421,0.00009187835,0.00021038437,0.0014945285],"category_scores_gemma":[0.0000835667,0.00010733892,0.00019553538,0.0000822037,0.000113944494,0.000083700674,0.00026594184,0.000245854,0.00057756854],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009591919,0.000015239841,0.00013960553,0.000039217448,0.0000055414353,0.00007807447,0.0000065213594,0.000037436468,0.9987631,0.000028690809,0.000069246904,0.0007212907],"study_design_scores_gemma":[0.00009074773,0.0011090585,0.018568786,0.000019158846,0.000038295133,0.0022530935,0.000050843246,0.0018705648,0.9683032,0.000094679104,0.007587295,0.000014328337],"about_ca_topic_score_codex":0.00031520752,"about_ca_topic_score_gemma":0.00040199517,"teacher_disagreement_score":0.0014945285,"about_ca_system_score_codex":0.00013498067,"about_ca_system_score_gemma":0.00010192556,"threshold_uncertainty_score":0.004999697},"labels":[],"label_agreement":null},{"id":"W2083638224","doi":"10.3899/jrheum.111218","title":"Levels of Plasma-soluble Triggering Receptor Expressed on Myeloid Cells-1 (sTREM-1) Are Correlated with Disease Activity in Rheumatoid Arthritis","year":2012,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Erythrocyte sedimentation rate; Rheumatoid arthritis; Internal medicine; Myeloid; Tumor necrosis factor alpha; White blood cell; Immunology; Myeloid cells; Arthritis; Endocrinology; Receptor; Rheumatoid factor","score_opus":0.014779935952453934,"score_gpt":0.20754925170957692,"score_spread":0.19276931575712297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2083638224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9991295,0.0006013594,0.00007265909,0.000011460565,0.0000028868305,0.0000026616324,0.000060713748,0.0000035489932,0.00011526974],"genre_scores_gemma":[0.9995442,0.00013672208,0.00011660627,0.000009275023,0.000010405807,0.000003155749,0.00008283784,7.2875406e-7,0.00009599063],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983275,0.000043001564,0.000025107,0.000037952006,0.00004021323,0.000021008576],"domain_scores_gemma":[0.99925476,0.00016705535,0.0004179709,0.000025869043,0.000055703254,0.00007860086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020359288,0.00027786905,0.00024238302,0.00043815398,0.00012747248,0.00027096958,0.00010880329,0.00032930964,0.00154663],"category_scores_gemma":[0.00089794747,0.00015001596,0.00011258622,0.0003439111,0.00015210015,0.00014531935,0.00016140676,0.00022231459,0.0003085851],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007292437,0.000066065295,0.9768272,0.000056918776,0.00007574055,0.00028452714,0.00007384836,0.00006238132,0.017759643,0.00001210502,0.00006775885,0.003984557],"study_design_scores_gemma":[0.000018326802,0.00041960712,0.9964468,0.0000058172423,0.000035693225,0.0018034561,0.00005557783,0.00015093536,0.00086594827,0.00001752223,0.00017689602,0.0000034617224],"about_ca_topic_score_codex":0.00018042806,"about_ca_topic_score_gemma":0.00018988951,"teacher_disagreement_score":0.00154663,"about_ca_system_score_codex":0.000063832915,"about_ca_system_score_gemma":0.000049189617,"threshold_uncertainty_score":0.005173981},"labels":[],"label_agreement":null},{"id":"W2085092368","doi":"10.1016/s1499-2671(09)33023-3","title":"Insulin infusion suppresses endotoxin-induced oxidative, nitrative and inflammatory stress in normal human subjects","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Diabetes","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Insulin; TBARS; Medicine; Oxidative stress; Internal medicine; Endocrinology; Nitric oxide; Nitrite; Inflammation; Chemistry; Lipid peroxidation; Nitrate","score_opus":0.010133656111528774,"score_gpt":0.20996536349143502,"score_spread":0.19983170737990624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085092368","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988433,0.00050455885,0.0001686576,0.00003076866,0.000029908735,0.000009793476,0.000043967684,0.000018785648,0.00035024257],"genre_scores_gemma":[0.998777,0.0002636556,0.00014241067,0.000046305813,0.000027101127,0.0000123611235,0.00012417075,0.0000059466715,0.0006010306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998963,0.000031409876,0.000009277361,0.000025183273,0.000014752885,0.000023036177],"domain_scores_gemma":[0.99983096,0.000033265085,0.00002737259,0.000028824523,0.000016539134,0.000062940286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024718198,0.00039765867,0.0004558049,0.00016705801,0.00018313716,0.00032580463,0.00012345154,0.00024285723,0.00094337517],"category_scores_gemma":[0.00039553596,0.0001838915,0.00014609225,0.00016003441,0.00023182164,0.00016221261,0.00013974436,0.0005307642,0.00017688879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.22711837,0.0057198987,0.095643155,0.00016626569,0.00020550644,0.0012299528,0.0005370661,0.0002892875,0.58884037,0.00011131191,0.00090354215,0.07923528],"study_design_scores_gemma":[0.0030645207,0.049539436,0.8368975,0.000043178497,0.00045533894,0.0014625993,0.00069493207,0.0021693672,0.102014475,0.00023793966,0.003372999,0.000047681242],"about_ca_topic_score_codex":0.0010371716,"about_ca_topic_score_gemma":0.00093306927,"teacher_disagreement_score":0.0010371716,"about_ca_system_score_codex":0.00013708066,"about_ca_system_score_gemma":0.00020336083,"threshold_uncertainty_score":0.0031558871},"labels":[],"label_agreement":null},{"id":"W2085716122","doi":"10.1016/j.cyto.2008.07.372","title":"289 NOX2: A novel regulator of proinflammatory cytokine production in response to respiratory virus infections","year":2008,"lang":"en","type":"article","venue":"Cytokine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Proinflammatory cytokine; Regulator; Cytokine; Immunology; Respiratory system; Medicine; Biology; Inflammation; Internal medicine","score_opus":0.02417259665460924,"score_gpt":0.239731104248207,"score_spread":0.21555850759359776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2085716122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97655755,0.00889317,0.0077943075,0.00045074665,0.00023633195,0.000061848215,0.00052759825,0.00008883841,0.005389679],"genre_scores_gemma":[0.9903964,0.0019500207,0.002557561,0.00016669696,0.00011857108,0.000027187081,0.000951183,0.000017207221,0.0038151254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989784,0.000018661449,0.0000052804767,0.00002079819,0.000029537221,0.000027835353],"domain_scores_gemma":[0.99994683,0.000005413063,0.00001033835,0.000004614785,0.000009998965,0.000022777438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021502176,0.00036074975,0.0002969271,0.00019505605,0.00027594867,0.000696453,0.00027515081,0.0003356911,0.0010706506],"category_scores_gemma":[0.0001402475,0.00015097484,0.00023288102,0.00012640079,0.00023618467,0.0003045381,0.00032205525,0.00044485187,0.00040735074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010931786,0.000061917846,0.0018451852,0.000071049166,0.00001542248,0.00070608995,0.000020812735,0.00015914631,0.99125797,0.0006047868,0.00029710762,0.0038673421],"study_design_scores_gemma":[0.00017280431,0.0008721528,0.06664398,0.0000312391,0.00009712125,0.005700743,0.00022614274,0.0064222594,0.897813,0.0014925309,0.020496562,0.000031474385],"about_ca_topic_score_codex":0.00021141274,"about_ca_topic_score_gemma":0.0001804112,"teacher_disagreement_score":0.0010706506,"about_ca_system_score_codex":0.00032597643,"about_ca_system_score_gemma":0.00017549406,"threshold_uncertainty_score":0.0035817027},"labels":[],"label_agreement":null},{"id":"W2086468008","doi":"10.1165/rcmb.2008-0362oc","title":"Priming of Alveolar Macrophages upon Instillation of Lipopolysaccharide in the Human Lung","year":2009,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Lipopolysaccharide; Alveolar macrophage; TLR4; Bronchoalveolar lavage; TLR2; In vivo; Ex vivo; Lipoteichoic acid; Lung; Immunology; Immune system; Medicine; Macrophage; Biology; In vitro; Internal medicine; Staphylococcus aureus","score_opus":0.007703468589941181,"score_gpt":0.25837748514431186,"score_spread":0.25067401655437066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2086468008","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970542,0.0011647963,0.0010850492,0.00006282478,0.00002791238,0.00005921846,0.000080768696,0.000033003504,0.00043225093],"genre_scores_gemma":[0.9971807,0.00057766784,0.00112906,0.00007957209,0.000034512384,0.00009271956,0.00018530784,0.0000075622215,0.0007128924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99979657,0.0000773502,0.000013845688,0.000034844026,0.000032140837,0.00004521916],"domain_scores_gemma":[0.9998596,0.00003516906,0.000034204124,0.000024674304,0.0000141091205,0.00003226568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003495482,0.00039113782,0.00029931628,0.00014939159,0.00012492527,0.00026979434,0.00013898291,0.0002997952,0.0014431044],"category_scores_gemma":[0.00025319232,0.00016290051,0.00019230963,0.000065542845,0.00033294977,0.00014687792,0.00020425688,0.0004148024,0.000576529],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009905184,0.000101210404,0.0006085265,0.000045891124,0.0000035325731,0.00016984924,0.00004046168,0.000034457214,0.9965803,0.000026038013,0.000024126117,0.0013750123],"study_design_scores_gemma":[0.00020125546,0.008489765,0.01997933,0.000024914176,0.000051802246,0.00095073093,0.00015702906,0.00066678214,0.9674761,0.00013775096,0.0018529271,0.000011516963],"about_ca_topic_score_codex":0.00011697756,"about_ca_topic_score_gemma":0.000118741984,"teacher_disagreement_score":0.0014431044,"about_ca_system_score_codex":0.00010823188,"about_ca_system_score_gemma":0.00016996266,"threshold_uncertainty_score":0.004827738},"labels":[],"label_agreement":null},{"id":"W2090064580","doi":"10.1371/journal.pone.0017440","title":"Combinations of Host Biomarkers Predict Mortality among Ugandan Children with Severe Malaria: A Retrospective Case-Control Study","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":157,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"National Blood Foundation; Advanced Research Projects Agency; Canada Research Chairs; Canadian Institutes of Health Research; Genome Canada; Ontario Genomics; Ontario Genomics Institute","keywords":"Malaria; Procalcitonin; Neopterin; Medicine; Receiver operating characteristic; Cerebral Malaria; Biomarker; Immunology; Plasmodium falciparum; Internal medicine; Gastroenterology; Biology; Sepsis","score_opus":0.023576719979222317,"score_gpt":0.19934832345693235,"score_spread":0.17577160347771004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2090064580","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995523,0.00014233473,0.000074520445,0.0000072657162,0.000002709878,0.000025312916,0.00008551204,0.0000014574233,0.00010856318],"genre_scores_gemma":[0.99959487,0.00007580403,0.00012196075,0.000013390739,0.0000051394177,0.000034467932,0.000112651636,0.0000012097414,0.00004054724],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990778,0.00027490844,0.00011567584,0.00026632668,0.000126843,0.00013842195],"domain_scores_gemma":[0.9985526,0.0003221157,0.00056977116,0.00021545644,0.00017103733,0.00016892688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010838974,0.0005989025,0.00062624284,0.0010724334,0.00089965726,0.00073773885,0.0004910839,0.00066350034,0.0010516304],"category_scores_gemma":[0.0023023502,0.0009513316,0.00044218393,0.0010890632,0.0007988928,0.0005255059,0.0006831631,0.0006550299,0.00019399106],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013810067,0.000056955127,0.9988181,0.0000135088185,0.00003925927,0.00023147458,0.0001483517,0.00001673344,0.00012357006,0.000010655703,0.00003680643,0.00036648358],"study_design_scores_gemma":[0.000042155392,0.000573691,0.995793,0.00002018187,0.000076837,0.0021820704,0.00066353683,0.00022032873,0.000093467956,0.000021799111,0.00030294192,0.0000098799765],"about_ca_topic_score_codex":0.003893143,"about_ca_topic_score_gemma":0.0035507607,"teacher_disagreement_score":0.003893143,"about_ca_system_score_codex":0.0005233959,"about_ca_system_score_gemma":0.0004180998,"threshold_uncertainty_score":0.0077409744},"labels":[],"label_agreement":null},{"id":"W2099204219","doi":"10.1093/intimm/dxl119","title":"Effects of TREM-1 activation in human neutrophils: activation of signaling pathways, recruitment into lipid rafts and association with TLR4","year":2006,"lang":"en","type":"article","venue":"International Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":140,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Lipid raft; Cell biology; Signal transduction; Phosphorylation; Chemistry; Receptor; LYN; Innate immune system; Inflammation; Biology; Immunology; Biochemistry; Proto-oncogene tyrosine-protein kinase Src","score_opus":0.011655166604832316,"score_gpt":0.22867607936812828,"score_spread":0.21702091276329596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2099204219","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99590933,0.0022775638,0.0005341972,0.00008838542,0.000022007756,0.000035023968,0.00016414192,0.000010558239,0.0009589117],"genre_scores_gemma":[0.99672014,0.0011815563,0.00061491167,0.000064568114,0.00001551557,0.000067126064,0.00027526726,0.0000016274907,0.0010593114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998373,0.00007051242,0.0000112790285,0.000018938277,0.00002442817,0.000037464368],"domain_scores_gemma":[0.999969,0.000006582401,0.0000064015608,0.000003582235,0.0000041161297,0.000010198008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024607396,0.00020425279,0.00016456004,0.00010270471,0.00013783813,0.00017681443,0.00008585881,0.00018193274,0.0021515766],"category_scores_gemma":[0.00013789162,0.00007617661,0.00014106187,0.000073004136,0.00011220082,0.00011383458,0.00021599101,0.00027676017,0.00047022718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024198832,0.00022189105,0.0008180821,0.00016989921,0.000010990874,0.00044480537,0.000054728538,0.000074927055,0.9913368,0.0001268154,0.00021661312,0.0041045113],"study_design_scores_gemma":[0.0002442846,0.003280984,0.026568381,0.000031720996,0.000037303216,0.0016919366,0.0001507624,0.0013884441,0.9603949,0.00012193251,0.006078742,0.000010580377],"about_ca_topic_score_codex":0.00023605816,"about_ca_topic_score_gemma":0.00031613477,"teacher_disagreement_score":0.0021515766,"about_ca_system_score_codex":0.000113149,"about_ca_system_score_gemma":0.00013349866,"threshold_uncertainty_score":0.0071977377},"labels":[],"label_agreement":null},{"id":"W2100855128","doi":"10.1086/522141","title":"Expression Profile and Function of Triggering Receptor Expressed on Myeloid Cells–1 during Melioidosis","year":2007,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Universiteit van Amsterdam; Wellcome Trust","keywords":"Melioidosis; Burkholderia pseudomallei; Monocyte; Receptor; Biology; Myeloid; Granulocyte; Immunology; Receptor expression; Microbiology; Bacteria; Biochemistry","score_opus":0.005836752614047141,"score_gpt":0.2006214466366176,"score_spread":0.19478469402257045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2100855128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993006,0.00027780482,0.00007906926,0.000007861319,0.0000021053668,0.000006749978,0.000079314945,0.000004686448,0.0002416487],"genre_scores_gemma":[0.9991879,0.00015969531,0.00016703206,0.000013934646,0.0000054964758,0.000010423587,0.0002463595,0.0000022373945,0.00020694589],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999056,0.000014509263,0.000009781571,0.000021169117,0.00001473886,0.000034190958],"domain_scores_gemma":[0.9998983,0.000015554566,0.000036459813,0.0000070671535,0.000014565708,0.000027986449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009686005,0.00017217791,0.00017349317,0.00019567712,0.00012708448,0.00023202,0.00011341744,0.00023785765,0.00098367],"category_scores_gemma":[0.00021307985,0.00008786706,0.00011830517,0.00012969178,0.00015075301,0.00012395569,0.00010917243,0.00021867572,0.00041662873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00080295285,0.00002415834,0.012792883,0.000041294606,0.000007344754,0.00071668206,0.00009135863,0.000050259107,0.9841308,0.000027674332,0.000038224534,0.0012763665],"study_design_scores_gemma":[0.0001228927,0.0028920956,0.6679135,0.00003932235,0.00011802921,0.01274199,0.0006239364,0.0011007583,0.311423,0.00011535941,0.0028848245,0.000024289344],"about_ca_topic_score_codex":0.0003263857,"about_ca_topic_score_gemma":0.00030206607,"teacher_disagreement_score":0.00098367,"about_ca_system_score_codex":0.00024239409,"about_ca_system_score_gemma":0.0000721265,"threshold_uncertainty_score":0.0032906532},"labels":[],"label_agreement":null},{"id":"W2106634168","doi":"10.4049/jimmunol.172.12.7744","title":"CD200 Is a Ligand for All Members of the CD200R Family of Immunoregulatory Molecules","year":2004,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":128,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Toronto General Hospital; Toronto Western Hospital; University of Toronto","funders":"","keywords":"Ligand (biochemistry); Immunology; Chemistry; Biology; Receptor; Biochemistry","score_opus":0.012031518696789596,"score_gpt":0.22247492125818044,"score_spread":0.21044340256139085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2106634168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92917913,0.024404317,0.010179645,0.00092505733,0.00015125058,0.00009208145,0.0017204671,0.0006794314,0.03266871],"genre_scores_gemma":[0.9421461,0.0075507327,0.007984063,0.00046599412,0.0001798641,0.00007316128,0.0047576274,0.000057951893,0.036784615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99982303,0.000021583706,0.000011167597,0.00004094696,0.000060253886,0.000042917938],"domain_scores_gemma":[0.99989426,0.000011324812,0.000027564904,0.000008961945,0.000019698002,0.00003827344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000086435415,0.00040261223,0.00024755555,0.000507721,0.0003346555,0.0005345239,0.00027112282,0.0004693439,0.004669559],"category_scores_gemma":[0.00015301735,0.0001339494,0.00023572348,0.0003404099,0.00013327913,0.00026847082,0.00032732423,0.000457826,0.001901797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020600061,0.000037883365,0.0016102374,0.00010822639,0.000022382308,0.0006209931,0.00004048327,0.00009183908,0.9640418,0.0011570579,0.001818015,0.03024498],"study_design_scores_gemma":[0.000060923714,0.000673454,0.027088845,0.00007132275,0.0000972072,0.01181547,0.00012464735,0.0015704186,0.7305885,0.0012472774,0.22662257,0.00003943616],"about_ca_topic_score_codex":0.00087811437,"about_ca_topic_score_gemma":0.0011686694,"teacher_disagreement_score":0.004669559,"about_ca_system_score_codex":0.00040997742,"about_ca_system_score_gemma":0.00019433541,"threshold_uncertainty_score":0.015621185},"labels":[],"label_agreement":null},{"id":"W2107009994","doi":"10.1684/ecn.2011.0274","title":"TREM-1 interaction with the LPS/TLR4 receptor complex","year":2011,"lang":"en","type":"article","venue":"European Cytokine Network","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"TLR4; Receptor; Cell biology; Toll-like receptor; Inflammation; Blocking (statistics); Stimulation; Chemistry; Interleukin-21 receptor; Biology; Immunology; Innate immune system; Neuroscience; Biochemistry","score_opus":0.04136947978428801,"score_gpt":0.20667401115909606,"score_spread":0.16530453137480805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107009994","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98932236,0.0042204517,0.0028721427,0.00025897298,0.00005793687,0.000042680345,0.000135567,0.000045539968,0.0030442593],"genre_scores_gemma":[0.9918001,0.0013483121,0.0030948236,0.00013811392,0.000051324714,0.00006564793,0.00035503463,0.000008143683,0.0031384435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99960595,0.00014331096,0.00001980459,0.000044052107,0.000071413466,0.00011549332],"domain_scores_gemma":[0.9998553,0.000030768333,0.000041488373,0.000015906933,0.000021029135,0.0000355365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036663533,0.00035141062,0.00029237015,0.00029617106,0.0002908627,0.00034871677,0.0002649424,0.00041017466,0.0036901487],"category_scores_gemma":[0.00044115304,0.00016253651,0.00035452555,0.000099156125,0.00018375723,0.0003024516,0.000563634,0.00051727594,0.001275701],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032819572,0.000044414388,0.0008013837,0.00018280173,0.000031063417,0.00044013956,0.00003508304,0.000111987705,0.9941301,0.00044319354,0.00018664841,0.003265054],"study_design_scores_gemma":[0.00008605155,0.000608263,0.01183732,0.00003652447,0.000052663192,0.002349985,0.000048189777,0.0023129538,0.9738913,0.0003788869,0.008383306,0.0000145805925],"about_ca_topic_score_codex":0.00014932522,"about_ca_topic_score_gemma":0.00013017784,"teacher_disagreement_score":0.0036901487,"about_ca_system_score_codex":0.00029946186,"about_ca_system_score_gemma":0.00022241891,"threshold_uncertainty_score":0.012344778},"labels":[],"label_agreement":null},{"id":"W2107144435","doi":"10.1155/2014/767185","title":"Impaired Resolution of Inflammation in the<i>Endoglin</i>Heterozygous Mouse Model of Chronic Colitis","year":2014,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada","keywords":"Inflammation; Colitis; Endoglin; Heterozygote advantage; Immunology; Medicine; Biology; Genotype; Genetics; Gene","score_opus":0.010317596458193586,"score_gpt":0.20820173629705635,"score_spread":0.19788413983886277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2107144435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99052596,0.0007874437,0.004765953,0.00038500992,0.00010427354,0.00008338462,0.0011846898,0.00039902068,0.0017641737],"genre_scores_gemma":[0.977815,0.0011117102,0.0074324654,0.0002923824,0.00006951184,0.00018971511,0.001425024,0.00025930585,0.011404966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994734,0.00008321409,0.00007964559,0.00012207929,0.00012823702,0.000113558955],"domain_scores_gemma":[0.999241,0.000075012744,0.0003029019,0.000060687526,0.000041039977,0.00027931307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038735959,0.0010996782,0.0007306179,0.0011549679,0.00033184036,0.0007818301,0.00041647148,0.0013455785,0.003119037],"category_scores_gemma":[0.00026955598,0.00052527507,0.00048701267,0.0003323016,0.0008978529,0.0005684456,0.0004227333,0.0021153511,0.0009409223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047831645,0.00017840546,0.00021395796,0.000049782044,0.000009911191,0.00033442635,0.000026019989,0.00009784776,0.9972971,0.00031564716,0.00008283642,0.0009158115],"study_design_scores_gemma":[0.00034559192,0.0031547828,0.013287725,0.00008896195,0.00009440752,0.0047239545,0.00017665372,0.003344823,0.9679975,0.0005272407,0.0062128287,0.00004558797],"about_ca_topic_score_codex":0.00037881947,"about_ca_topic_score_gemma":0.00064966787,"teacher_disagreement_score":0.003119037,"about_ca_system_score_codex":0.00042037579,"about_ca_system_score_gemma":0.000277721,"threshold_uncertainty_score":0.01043427},"labels":[],"label_agreement":null},{"id":"W2121427946","doi":"10.1165/rcmb.2014-0485oc","title":"Role of Triggering Receptor Expressed on Myeloid Cells-1/3 in <i>Klebsiella</i> -Derived Pneumosepsis","year":2015,"lang":"en","type":"article","venue":"American Journal of Respiratory Cell and Molecular Biology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Myeloid cells; Receptor; Klebsiella; Biology; Cancer research; Medicine; Microbiology; Myeloid; Internal medicine; Genetics; Gene; Escherichia coli","score_opus":0.009411246400913585,"score_gpt":0.22124459703776778,"score_spread":0.21183335063685418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2121427946","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99615246,0.0017002627,0.0008108781,0.00007757902,0.000024894902,0.000027866825,0.0001853282,0.000043274573,0.000977411],"genre_scores_gemma":[0.99761057,0.0006382475,0.0007544196,0.00006562166,0.000010542187,0.00002668434,0.00024970854,0.000010224116,0.00063395646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99986243,0.000028872586,0.000018635357,0.000018665878,0.000021613414,0.0000498934],"domain_scores_gemma":[0.9999039,0.000009517795,0.000040371415,0.00000819998,0.000009924303,0.000028037495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001563503,0.0003425061,0.00020513478,0.0001281556,0.00014393381,0.00026291702,0.00018379877,0.00044021435,0.0010004987],"category_scores_gemma":[0.00014186378,0.00012597171,0.00032238333,0.0000623677,0.000180383,0.00018615244,0.000215934,0.0004628133,0.0005388111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035002563,0.000016967353,0.00068194396,0.00004324938,0.0000032745672,0.0002851053,0.000014346739,0.00004191978,0.9977568,0.00006726551,0.000028136039,0.0007108968],"study_design_scores_gemma":[0.0001421338,0.0012340256,0.052258015,0.000048276055,0.00009749251,0.0047460278,0.00015089226,0.0016906529,0.93486136,0.0002488018,0.004500802,0.000021579355],"about_ca_topic_score_codex":0.0002919518,"about_ca_topic_score_gemma":0.00023356927,"teacher_disagreement_score":0.0010004987,"about_ca_system_score_codex":0.00025671133,"about_ca_system_score_gemma":0.00020734327,"threshold_uncertainty_score":0.0033469796},"labels":[],"label_agreement":null},{"id":"W2131519118","doi":"10.1007/s10753-010-9248-6","title":"Cathelicidin Peptide LL-37 Modulates TREM-1 Expression and Inflammatory Responses to Microbial Compounds","year":2010,"lang":"en","type":"article","venue":"Inflammation","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Cathelicidin; TLR2; Lipoteichoic acid; TLR4; Receptor; Cell biology; Degranulation; Inflammation; Biology; Innate immune system; Chemistry; Immunology; Biochemistry; Staphylococcus aureus; Bacteria","score_opus":0.01026844278062977,"score_gpt":0.22647173297215922,"score_spread":0.21620329019152945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2131519118","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965391,0.0014371395,0.0006991339,0.000083224884,0.000025781916,0.000019054352,0.0001429495,0.000019933057,0.0010338222],"genre_scores_gemma":[0.9966539,0.00051101716,0.000598693,0.000047525908,0.000016019394,0.000030663003,0.00015668427,0.0000067966494,0.0019787133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965286,0.000082242674,0.000019219944,0.00003453528,0.00004327817,0.00016794649],"domain_scores_gemma":[0.9998511,0.000021867878,0.00003313354,0.000018980198,0.00002043203,0.000054502038],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025657992,0.0003618561,0.00032091938,0.00026695113,0.0002925232,0.00047912568,0.00018205406,0.00031962534,0.0019142386],"category_scores_gemma":[0.00031553255,0.00019657098,0.00031200127,0.00012238261,0.0003847822,0.00042048364,0.00041744686,0.000693134,0.0005240596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002206924,0.000072262286,0.00081844046,0.00005701314,0.000008008418,0.00019490063,0.000047537873,0.000073276104,0.9938578,0.00013304346,0.00007394265,0.0024568494],"study_design_scores_gemma":[0.00009842833,0.0010961045,0.04747045,0.00003276293,0.00005729645,0.00067069696,0.00030211904,0.0013548794,0.9465473,0.00041249194,0.0019414184,0.000016046513],"about_ca_topic_score_codex":0.0006070787,"about_ca_topic_score_gemma":0.0008273559,"teacher_disagreement_score":0.0019142386,"about_ca_system_score_codex":0.00047769013,"about_ca_system_score_gemma":0.00037712077,"threshold_uncertainty_score":0.006403744},"labels":[],"label_agreement":null},{"id":"W2139198961","doi":"10.4049/jimmunol.0900109","title":"IL-4Rα, a New Member that Associates with Syk Kinase: Implication in IL-4-Induced Human Neutrophil Functions","year":2009,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Syk; Kinase; Cell biology; Chemistry; Biology; Signal transduction; Tyrosine kinase","score_opus":0.022867486419998435,"score_gpt":0.2456979351677007,"score_spread":0.22283044874770225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2139198961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.978881,0.015968282,0.0031764472,0.00028208076,0.00007370934,0.000051673447,0.00024001516,0.00006041186,0.0012663654],"genre_scores_gemma":[0.98642206,0.0078894375,0.0027020792,0.00007940906,0.00010407439,0.00006492809,0.0006784646,0.000009254313,0.0020503397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99990857,0.0000149678535,0.000011594997,0.000017742994,0.000024468454,0.000022748021],"domain_scores_gemma":[0.9998803,0.000009524435,0.00006810531,0.000008969533,0.000011625495,0.000021448486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012781133,0.000775687,0.0002814705,0.00034987277,0.00027777685,0.00038210044,0.00018392675,0.00027990123,0.0011155795],"category_scores_gemma":[0.0001547039,0.00011464396,0.00039077183,0.00024904724,0.0002824509,0.00032883152,0.0002915151,0.00036022445,0.0004751146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004691758,0.0000626705,0.003056895,0.00022391003,0.00002378885,0.0007925372,0.000048266167,0.000102446436,0.98930043,0.00018807739,0.000088537825,0.0056433445],"study_design_scores_gemma":[0.000056706318,0.00079407945,0.07280996,0.000038312774,0.00013823419,0.0052520246,0.00010723319,0.0011978601,0.91085446,0.00031738196,0.008421125,0.000012640791],"about_ca_topic_score_codex":0.00012531361,"about_ca_topic_score_gemma":0.00012455843,"teacher_disagreement_score":0.0011155795,"about_ca_system_score_codex":0.00030893128,"about_ca_system_score_gemma":0.00022569355,"threshold_uncertainty_score":0.0037320256},"labels":[],"label_agreement":null},{"id":"W2147721514","doi":"10.1002/path.4361","title":"Triggering receptor expressed on myeloid cells‐1 (<scp>TREM</scp>‐1) improves host defence in pneumococcal pneumonia","year":2014,"lang":"en","type":"article","venue":"The Journal of Pathology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Streptococcus pneumoniae; Pneumococcal pneumonia; Immunology; Innate immune system; Chemokine; Bronchoalveolar lavage; Immune system; Pneumonia; Biology; Sepsis; Myeloid; Receptor; Pneumococcal infections; Microbiology; Medicine; Lung; Antibiotics; Internal medicine","score_opus":0.009244271671539076,"score_gpt":0.2074669401410445,"score_spread":0.19822266846950543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2147721514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9963175,0.0019197478,0.00065901026,0.000119725686,0.000080210564,0.0000354058,0.0002197387,0.000100051155,0.00054855854],"genre_scores_gemma":[0.9946215,0.0018178694,0.0012905115,0.00015181807,0.000043085856,0.000060346163,0.0004412019,0.000019905596,0.0015538032],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998801,0.00002405504,0.000013351006,0.000015583399,0.00002817664,0.00003875574],"domain_scores_gemma":[0.99987566,0.000009014872,0.000034751403,0.000009232404,0.000009004219,0.00006226268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001788449,0.000377243,0.0006362485,0.00021649308,0.0001290113,0.00022304154,0.00022417151,0.0003940969,0.0010429701],"category_scores_gemma":[0.00016250057,0.00011177964,0.00027507133,0.000112484064,0.00024254207,0.00024321431,0.0002038977,0.00085275184,0.00025647818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004244891,0.0007482959,0.00034543648,0.00019058168,0.000024226343,0.00016036835,0.000019840494,0.00018161823,0.9820003,0.00009733931,0.0002615427,0.011725496],"study_design_scores_gemma":[0.0012842161,0.036609147,0.027942203,0.000064245956,0.00024938863,0.0018725925,0.000065849716,0.001969939,0.92178047,0.00027941875,0.00785003,0.000032501343],"about_ca_topic_score_codex":0.0002631505,"about_ca_topic_score_gemma":0.00036473208,"teacher_disagreement_score":0.0010429701,"about_ca_system_score_codex":0.00011132033,"about_ca_system_score_gemma":0.00022754006,"threshold_uncertainty_score":0.003489077},"labels":[],"label_agreement":null},{"id":"W2150162956","doi":"10.2174/1381612033392503","title":"Role of DAP12 in Innate and Adaptive Immune Responses","year":2003,"lang":"en","type":"review","venue":"Current Pharmaceutical Design","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Health Sciences Centre","funders":"","keywords":"Innate immune system; Receptor; Cell biology; Myeloid; Acquired immune system; Biology; Transmembrane protein; Immune system; Signal transducing adaptor protein; Myeloid cells; Function (biology); Signal transduction; Immunology; Genetics","score_opus":0.1697322612880621,"score_gpt":0.3880239592841979,"score_spread":0.21829169799613582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150162956","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012545282,0.99492824,0.00047779846,0.00027328148,0.00022014852,0.0000055109003,0.000017343787,0.000015460124,0.002807852],"genre_scores_gemma":[0.007867743,0.98646414,0.00079616316,0.00025778927,0.00032407028,0.000013529547,0.00004357681,0.0000022410536,0.004230759],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999125,0.000012299196,0.000012924551,0.000016261187,0.000034678098,0.000011422423],"domain_scores_gemma":[0.9999212,0.000022290324,0.000013528098,0.0000024834837,0.000024381343,0.000016123306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026124684,0.0004780928,0.00072688644,0.0007177253,0.00019255145,0.0005510823,0.00041263664,0.0005277603,0.0024023468],"category_scores_gemma":[0.00020973587,0.00012197902,0.0001350216,0.00067237625,0.00024594943,0.0006568963,0.0002753988,0.00057497196,0.0019882414],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014527532,0.00004993606,0.00033167735,0.0039295363,0.000027245294,0.00046193856,0.000042488355,0.00030035907,0.015745353,0.0028382088,0.007729975,0.968398],"study_design_scores_gemma":[0.00003487671,0.00030313997,0.0023623218,0.00079851976,0.000057206442,0.0033633686,0.000077385695,0.00017090517,0.0068298406,0.0030188488,0.98296976,0.000013928768],"about_ca_topic_score_codex":0.00031353155,"about_ca_topic_score_gemma":0.0005428018,"teacher_disagreement_score":0.0024023468,"about_ca_system_score_codex":0.00041205308,"about_ca_system_score_gemma":0.0004731247,"threshold_uncertainty_score":0.008036613},"labels":[],"label_agreement":null},{"id":"W2150788540","doi":"10.1128/iai.72.5.2477-2483.2004","title":"Differential Regulation of DAP12 and Molecules Associated with DAP12 during Host Responses to Mycobacterial Infection","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Government of Ontario","keywords":"Biology; Host (biology); Differential (mechanical device); Virology; Ecology","score_opus":0.009637798701956609,"score_gpt":0.21217923674880637,"score_spread":0.20254143804684976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2150788540","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764854,0.0014196734,0.00030666293,0.000019244108,0.000007877396,0.0000088900515,0.00009362123,0.000014309001,0.0004811711],"genre_scores_gemma":[0.9978254,0.0006042006,0.0005931388,0.000027368218,0.000009453775,0.000027581002,0.00017287928,0.00000583904,0.0007343177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976856,0.00005081377,0.000022837517,0.000042083288,0.00003033757,0.00008533118],"domain_scores_gemma":[0.9997867,0.00003814362,0.00006494669,0.000014931357,0.000023701625,0.00007159155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015433674,0.00023727055,0.00026350273,0.00020533711,0.00011972284,0.00040759836,0.00009660086,0.00023500134,0.000682104],"category_scores_gemma":[0.00023210011,0.0001363263,0.00014444748,0.00014349009,0.00021557604,0.0002172619,0.00027267146,0.00039148962,0.00023444791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034633963,0.000013903656,0.0008751382,0.000044490338,0.0000031265793,0.000103901395,0.000027562208,0.00002990152,0.9976058,0.00002797223,0.00001166867,0.00091023097],"study_design_scores_gemma":[0.00006135939,0.001376193,0.1397784,0.00003632415,0.00006373221,0.0017474502,0.00032714003,0.0015600617,0.8514555,0.00016024064,0.0034156775,0.00001777174],"about_ca_topic_score_codex":0.00006284286,"about_ca_topic_score_gemma":0.000107185806,"teacher_disagreement_score":0.000682104,"about_ca_system_score_codex":0.00019449668,"about_ca_system_score_gemma":0.00008209692,"threshold_uncertainty_score":0.0022819042},"labels":[],"label_agreement":null},{"id":"W2152786316","doi":"10.3899/jrheum.090664","title":"Elevated Serum Concentrations of Triggering Receptor Expressed on Myeloid Cells-1 in Diffuse Cutaneous Systemic Sclerosis: Association with Severity of Pulmonary Fibrosis","year":2010,"lang":"en","type":"article","venue":"The Journal of Rheumatology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Pulmonary fibrosis; Internal medicine; Myeloid; Fibrosis; Respiratory disease; Systemic disease; Pathogenesis; Immunology; Gastroenterology; Pathology; Lung; Immunopathology","score_opus":0.007510943295034827,"score_gpt":0.18631783496975277,"score_spread":0.17880689167471794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2152786316","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995505,0.00022234122,0.000060023915,0.000011028654,0.0000014817193,0.000002508454,0.000032258416,0.0000037611883,0.00011612127],"genre_scores_gemma":[0.99975735,0.000048484348,0.00007983479,0.000008423002,0.000005878348,0.000002200438,0.000049512622,4.936914e-7,0.000047904963],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998362,0.00004200874,0.00003068871,0.000038599534,0.000032592186,0.000019998246],"domain_scores_gemma":[0.9993131,0.00017730356,0.0003221106,0.000024730862,0.000054091448,0.00010867899],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021615624,0.00031065906,0.00023762668,0.00057921465,0.00016479338,0.0002321322,0.00009728567,0.00035917325,0.0012512751],"category_scores_gemma":[0.0009304309,0.00015092705,0.00010694201,0.0003871418,0.00023561834,0.0001699962,0.00016881862,0.00021875581,0.00017422723],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029014744,0.000029598708,0.98795044,0.000025241394,0.000037830327,0.00040255912,0.000056049685,0.000064492495,0.009326619,0.00000963191,0.000041422834,0.0017659664],"study_design_scores_gemma":[0.000018477249,0.00040776838,0.9943562,0.000005713894,0.000028697325,0.0037999984,0.000067264365,0.00024039573,0.00094130315,0.00001611032,0.000114826966,0.0000032396665],"about_ca_topic_score_codex":0.0002669931,"about_ca_topic_score_gemma":0.00033056847,"teacher_disagreement_score":0.0012512751,"about_ca_system_score_codex":0.000094113675,"about_ca_system_score_gemma":0.000073618576,"threshold_uncertainty_score":0.0041859746},"labels":[],"label_agreement":null},{"id":"W2154194551","doi":"10.4049/jimmunol.1202610","title":"Inflammation Induced by MMP-9 Enhances Tumor Regression of Experimental Breast Cancer","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":95,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Inflammation; Matrix metalloproteinase; Breast cancer; Cancer; Regression; Oncology; Cancer research; Internal medicine; Medicine; Mathematics; Statistics","score_opus":0.00988723470313594,"score_gpt":0.24208271084600996,"score_spread":0.23219547614287403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2154194551","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901932,0.0040781475,0.0017747782,0.0002884044,0.0001740206,0.00008222457,0.0005333434,0.00021423791,0.0026616077],"genre_scores_gemma":[0.9893857,0.002106649,0.0020536913,0.00010778401,0.00005221657,0.000107969914,0.000848269,0.000028791606,0.0053087366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99976164,0.000046387904,0.000021523676,0.00003909831,0.00005931842,0.00007191581],"domain_scores_gemma":[0.9998379,0.000026583311,0.00003680618,0.00002343393,0.00001580147,0.00005936963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021623768,0.0004906915,0.00043962328,0.00035376154,0.00012461854,0.00024394445,0.00018530773,0.0002656575,0.0022341178],"category_scores_gemma":[0.0001721597,0.00015304697,0.00034103176,0.00022732063,0.00021906682,0.00021974836,0.00018803969,0.0012948978,0.00054891466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008005834,0.0004557636,0.00015726994,0.00006267028,0.000008516296,0.0000436615,0.0000188751,0.00005310936,0.9956565,0.00005447662,0.00010393332,0.0025846018],"study_design_scores_gemma":[0.00009570455,0.00318576,0.002356195,0.000009103814,0.000028198978,0.00020862908,0.0000198955,0.0007273531,0.99112105,0.000045741046,0.0021984617,0.000003879048],"about_ca_topic_score_codex":0.00047602557,"about_ca_topic_score_gemma":0.0006621533,"teacher_disagreement_score":0.0022341178,"about_ca_system_score_codex":0.0003269718,"about_ca_system_score_gemma":0.00026433688,"threshold_uncertainty_score":0.007473886},"labels":[],"label_agreement":null},{"id":"W2298009293","doi":"","title":"[Assessment of cognition and associated factors in patients with stable chronic obstructive pulmonary disease].","year":2014,"lang":"en","type":"article","venue":"PubMed","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"COPD; Montreal Cognitive Assessment; Pulmonary disease; Internal medicine; Hypercapnia; Medicine; Hypoxemia; Subgroup analysis; Significant difference; Cognition; Gold standard (test); Pulmonary function testing; Cardiology; Gastroenterology; Cognitive impairment; Disease; Respiratory system; Confidence interval; Psychiatry","score_opus":0.007382617712501393,"score_gpt":0.18275117215522546,"score_spread":0.17536855444272406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2298009293","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98088455,0.010137336,0.0004201072,0.0005104823,0.00019112151,0.00026833423,0.0034419575,0.000045026864,0.00410115],"genre_scores_gemma":[0.99407214,0.0015194302,0.0006933453,0.0002883413,0.000088650064,0.00015511739,0.0024295854,0.0000024498552,0.0007509809],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99975806,0.00004891697,0.000047509355,0.000037492922,0.00007423917,0.000033780994],"domain_scores_gemma":[0.999483,0.000038854494,0.00016704762,0.000017750077,0.00016992293,0.00012343131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000651906,0.00062682177,0.0006651458,0.0010402818,0.00058080984,0.00046095022,0.000373212,0.00041937,0.0010400945],"category_scores_gemma":[0.0014822842,0.00010619115,0.00073807046,0.000988888,0.00014864275,0.0003611341,0.00038940262,0.00050023955,0.00023226501],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043248103,0.00013873081,0.98273164,0.000193397,0.00021246604,0.00012569614,0.00006188713,0.00007561642,0.00017094267,0.000026411215,0.0012697997,0.014561053],"study_design_scores_gemma":[0.00003590683,0.00036470997,0.9984762,0.000038580056,0.00008389028,0.00022568936,0.000046396442,0.00013802589,0.000044440025,0.000042678214,0.0004975917,0.000005867652],"about_ca_topic_score_codex":0.007827356,"about_ca_topic_score_gemma":0.012283314,"teacher_disagreement_score":0.007827356,"about_ca_system_score_codex":0.0003872173,"about_ca_system_score_gemma":0.0007133513,"threshold_uncertainty_score":0.015563548},"labels":[],"label_agreement":null},{"id":"W2314235523","doi":"10.1016/j.jneuroim.2014.08.401","title":"DICAM: A novel molecular effector in neuroinflammation","year":2014,"lang":"en","type":"article","venue":"Journal of Neuroimmunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Neuroinflammation; Effector; Neuroscience; Medicine; Psychology; Immunology; Inflammation","score_opus":0.00811410398959092,"score_gpt":0.21200192591374556,"score_spread":0.20388782192415464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2314235523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8261331,0.10122548,0.038270283,0.005452187,0.0018464536,0.00033970256,0.0028654127,0.00044398365,0.023423413],"genre_scores_gemma":[0.96248883,0.01227523,0.011248647,0.0009406864,0.00047003376,0.00014479675,0.0016220851,0.000033221186,0.01077653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99967515,0.00005515067,0.000026810296,0.00008291003,0.000073023904,0.00008688988],"domain_scores_gemma":[0.9997589,0.00002409818,0.00006609419,0.000022429203,0.000042857188,0.000085467414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005648045,0.0006705933,0.00044012774,0.0005175437,0.0006188859,0.0013149043,0.0005375986,0.0010473407,0.0027099175],"category_scores_gemma":[0.0004011841,0.0002222777,0.0002865496,0.0003659678,0.0006340732,0.001359063,0.0010888039,0.0011730242,0.0009835955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011688839,0.000052243096,0.0026140204,0.00062911015,0.000048086018,0.0015632565,0.00015333734,0.0002218999,0.9594492,0.0065151784,0.00264281,0.02494199],"study_design_scores_gemma":[0.00013409455,0.0012276239,0.020435944,0.00014907887,0.00013914987,0.01140399,0.00041791087,0.0024381687,0.8610303,0.005009042,0.09754873,0.00006599192],"about_ca_topic_score_codex":0.00007903441,"about_ca_topic_score_gemma":0.000088789784,"teacher_disagreement_score":0.0027099175,"about_ca_system_score_codex":0.0005426379,"about_ca_system_score_gemma":0.00026935895,"threshold_uncertainty_score":0.009065628},"labels":[],"label_agreement":null},{"id":"W2390579417","doi":"","title":"The investigation on the cognitive state of elder patients with chronic obstructive pulmonary disease","year":2013,"lang":"en","type":"article","venue":"China Medical Herald","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; COPD; Montreal Cognitive Assessment; Receiver operating characteristic; Pulmonary disease; Mini–Mental State Examination; Cognition; Outpatient clinic; Cognitive impairment; Concomitant; Mental state; Internal medicine; Area under the curve; Disease; Physical therapy; Psychiatry","score_opus":0.007056491528629915,"score_gpt":0.19250889956302608,"score_spread":0.18545240803439617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2390579417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99886936,0.00052572973,0.00004741283,0.000043893546,0.000005569173,0.000008654419,0.00008762654,0.0000023208436,0.00040943283],"genre_scores_gemma":[0.99934274,0.00023448173,0.00010086492,0.000035563062,0.0000157312,0.000008503172,0.00010140572,2.9349752e-7,0.0001603978],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998184,0.000044415432,0.0000335445,0.00002259993,0.000039275732,0.00004181259],"domain_scores_gemma":[0.99942577,0.00005512182,0.00028664828,0.00001507956,0.00011267018,0.00010472032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043781224,0.0003119617,0.0002619075,0.00076880853,0.0002857483,0.00037264585,0.0001172799,0.000289299,0.00051864795],"category_scores_gemma":[0.0012131458,0.00010919629,0.00021841067,0.00047302258,0.00015107608,0.00028830775,0.0002308113,0.00025244485,0.00012668279],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086412634,0.00005331578,0.9961689,0.00002220935,0.000020356336,0.000113789145,0.0000936646,0.00001956082,0.0003602694,0.000007005009,0.00006757683,0.0029869333],"study_design_scores_gemma":[0.000004223357,0.00020353562,0.9989473,0.0000088386205,0.000018211153,0.00034562816,0.0001375251,0.000073613635,0.00009929718,0.000014889244,0.00014457991,0.0000023424707],"about_ca_topic_score_codex":0.0017305944,"about_ca_topic_score_gemma":0.0028571347,"teacher_disagreement_score":0.0017305944,"about_ca_system_score_codex":0.00016184043,"about_ca_system_score_gemma":0.0002630587,"threshold_uncertainty_score":0.0034410954},"labels":[],"label_agreement":null},{"id":"W2409453590","doi":"","title":"[Prognostic value of extra-vascular lung water index and pulmonary vascular permeability index in patients with ARDS].","year":2015,"lang":"en","type":"article","venue":"PubMed","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Air (Canada)","funders":"","keywords":"ARDS; Medicine; Oxygenation index; Internal medicine; Receiver operating characteristic; Logistic regression; Univariate analysis; Cardiology; Gastroenterology; Lung; Multivariate analysis","score_opus":0.008755620121975546,"score_gpt":0.17366958453224737,"score_spread":0.16491396441027184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409453590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966691,0.0015958813,0.00021996723,0.00022371563,0.00006554135,0.000032392112,0.0005427975,0.000009566301,0.00064098544],"genre_scores_gemma":[0.9986873,0.00019786738,0.00017459472,0.000053240456,0.00006735098,0.000015655263,0.00062057667,8.894518e-7,0.00018256024],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998179,0.000038894326,0.000032631273,0.000036589307,0.000037804344,0.000036135996],"domain_scores_gemma":[0.9993849,0.000071521776,0.0002480583,0.000019862127,0.00010898853,0.00016670403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041228472,0.0003535552,0.0003366457,0.00040610225,0.00024906956,0.00037139768,0.00022673595,0.0004501894,0.0013685159],"category_scores_gemma":[0.0012217689,0.00011421993,0.0003559917,0.000394356,0.00017318015,0.00035925256,0.0002845912,0.00048427656,0.00030379312],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022389661,0.000021378803,0.99707305,0.000024692185,0.000036875692,0.00012421938,0.0000118934,0.00004508313,0.0002141957,0.000009557546,0.00018724344,0.002027998],"study_design_scores_gemma":[0.000031139607,0.00033456594,0.9978132,0.000021161233,0.00006071819,0.0006601664,0.00007142837,0.0004813017,0.00013935867,0.000050453986,0.0003303085,0.0000061672918],"about_ca_topic_score_codex":0.0007268134,"about_ca_topic_score_gemma":0.00096442166,"teacher_disagreement_score":0.0013685159,"about_ca_system_score_codex":0.00012267189,"about_ca_system_score_gemma":0.00028831876,"threshold_uncertainty_score":0.004578173},"labels":[],"label_agreement":null},{"id":"W2432424794","doi":"10.2174/187152811796117762","title":"Editorial from Guest Editor [Hot topic: Novel Inflammatory Biomarkers in Diseases (Guest Editor: Yu Chen)]","year":2011,"lang":"en","type":"editorial","venue":"Inflammation & Allergy - Drug Targets","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dr. Everett Chalmers Regional Hospital; Horizon Health Network","funders":"","keywords":"Chen; Medicine; Biology","score_opus":0.006753061327319895,"score_gpt":0.21019080909286575,"score_spread":0.20343774776554585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2432424794","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004526446,0.004759052,0.000106798354,0.033940934,0.9599766,0.000024383926,0.000048163776,0.000047895912,0.0010509563],"genre_scores_gemma":[0.00046793284,0.0029660414,0.000102607424,0.02926716,0.960857,0.00003133166,0.000038860275,0.000033394837,0.006235682],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99604094,0.00082244514,0.00050424377,0.0005395973,0.0017255688,0.00036707977],"domain_scores_gemma":[0.98534715,0.0035368702,0.0019768283,0.00035052237,0.00602863,0.00276003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005771416,0.0040495256,0.0050055846,0.0040443554,0.0031239544,0.007013047,0.0032513584,0.015927522,0.014184469],"category_scores_gemma":[0.020359008,0.0014068144,0.0028939603,0.0015767043,0.0016869233,0.0027096148,0.0021176694,0.015896408,0.012884283],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049007118,0.000008004038,0.000034582277,0.00015884411,0.000024740639,0.00021076282,0.0000055518226,0.000016151418,0.000053503725,0.00006932909,0.9959009,0.0034685894],"study_design_scores_gemma":[0.00020729828,0.00007763854,0.0006708965,0.0005389694,0.00018356871,0.0007544696,0.00003762197,0.00029195184,0.00022010901,0.0005940818,0.99638367,0.0000397002],"about_ca_topic_score_codex":0.0011406151,"about_ca_topic_score_gemma":0.0035244501,"teacher_disagreement_score":0.015927522,"about_ca_system_score_codex":0.0024355971,"about_ca_system_score_gemma":0.002499117,"threshold_uncertainty_score":0.047451794},"labels":[],"label_agreement":null},{"id":"W2515351162","doi":"10.1016/j.cjca.2015.07.319","title":"THE MOLECULAR SIGNATURE OF CSCS SOURCED FROM AGED DONORS WITH ISCHEMIC CARDIOMYOPATHY IMPAIRS CELL CYCLE CONTROL AND REPAIR","year":2015,"lang":"en","type":"article","venue":"Canadian Journal of Cardiology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Medicine; Ischemic cardiomyopathy; Oxidative stress; Ejection fraction; Cardiomyopathy; Stem cell; Internal medicine; Andrology; Heart failure; Cell biology; Biology","score_opus":0.004025704087524391,"score_gpt":0.16361661052229345,"score_spread":0.15959090643476906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515351162","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964863,0.0009832638,0.0006205657,0.00010057239,0.00004170998,0.000034890927,0.00044386854,0.000033963664,0.0012548319],"genre_scores_gemma":[0.9970696,0.00041263344,0.00031549842,0.00009540543,0.00003281933,0.000035335008,0.0006744013,0.0000066721173,0.0013576156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99987507,0.000013131424,0.00001123158,0.000020903184,0.00003697114,0.000042747706],"domain_scores_gemma":[0.99983156,0.000014154223,0.000037436934,0.000016382399,0.00004312887,0.00005729766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011687631,0.00014124141,0.0002640563,0.00052013044,0.00018532308,0.0003245896,0.00010794843,0.00026673867,0.0029540434],"category_scores_gemma":[0.00020366744,0.000107679174,0.00012178192,0.00025941164,0.000108558816,0.00018927439,0.00019121313,0.00044006816,0.000689698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008966685,0.000118531316,0.016711706,0.00006177815,0.00002005505,0.00043482106,0.00014581937,0.000053626354,0.97303367,0.00034881174,0.00047474622,0.00769978],"study_design_scores_gemma":[0.00014335854,0.0027552627,0.67159295,0.00006434723,0.0001981507,0.0056400606,0.0012115869,0.0018930722,0.301734,0.0007501357,0.013979212,0.000037847953],"about_ca_topic_score_codex":0.00053586176,"about_ca_topic_score_gemma":0.0006190768,"teacher_disagreement_score":0.0029540434,"about_ca_system_score_codex":0.0001313979,"about_ca_system_score_gemma":0.0001970884,"threshold_uncertainty_score":0.009882212},"labels":[],"label_agreement":null},{"id":"W2528134398","doi":"10.1038/srep34520","title":"Tea polyphenols inhibit the activation of NF-κB and the secretion of cytokines and matrix metalloproteinases by macrophages stimulated with Fusobacterium nucleatum","year":2016,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Université Laval","keywords":"Fusobacterium nucleatum; Secretion; Proinflammatory cytokine; Matrix metalloproteinase; Inflammatory bowel disease; Inflammation; Interleukin 8; Microbiology; Tumor necrosis factor alpha; Lipopolysaccharide; Chemistry; Immunology; Periodontitis; Medicine; Biology; Porphyromonas gingivalis; Biochemistry; Internal medicine; Disease","score_opus":0.004821955754065187,"score_gpt":0.19543330806442463,"score_spread":0.19061135231035944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528134398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98954296,0.007076909,0.0015389875,0.0002957437,0.00009975245,0.00005279857,0.00021405701,0.00006427611,0.0011145577],"genre_scores_gemma":[0.9913421,0.0041164174,0.0012933742,0.00017268497,0.000047273737,0.00006820525,0.0002790445,0.000014169062,0.0026666296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999895,0.000023796241,0.000010000669,0.000012004775,0.000017247221,0.000041904375],"domain_scores_gemma":[0.9999113,0.000017104618,0.000022228269,0.000010792903,0.000013689855,0.000024942792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015524268,0.00039178284,0.0003313478,0.00025501565,0.00016453228,0.00018630462,0.00015586149,0.0002474055,0.001263525],"category_scores_gemma":[0.0001653575,0.000110315086,0.00045914526,0.00017826042,0.00016941964,0.00018040999,0.00025840744,0.00043378366,0.00023851328],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010875821,0.00023724625,0.00019738625,0.00018020709,0.00002251009,0.00005493532,0.000042057476,0.000038655293,0.9935994,0.000031159198,0.000094929776,0.0044139526],"study_design_scores_gemma":[0.00013199398,0.0031218152,0.010382859,0.00003363778,0.00009180763,0.00020214704,0.00010106749,0.00049660465,0.9807606,0.0001083749,0.004560916,0.000008189658],"about_ca_topic_score_codex":0.0008070512,"about_ca_topic_score_gemma":0.0013944122,"teacher_disagreement_score":0.001263525,"about_ca_system_score_codex":0.00011528395,"about_ca_system_score_gemma":0.00031628882,"threshold_uncertainty_score":0.004226923},"labels":[],"label_agreement":null},{"id":"W2534906108","doi":"10.1016/j.jalz.2016.06.1340","title":"P2‐173: Mutation Analysis of the <i>MS4A</i> and <i>TREM</i> Gene‐Clusters in a Case‐Control Alzheimer's Disease Dataset","year":2016,"lang":"en","type":"article","venue":"Alzheimer s & Dementia","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"TREM2; Genetics; Single-nucleotide polymorphism; Gene; Biology; Locus (genetics); Allele; Gene cluster; Coding region; Genome-wide association study; Genetic association; Gene isoform; Genotype; Receptor","score_opus":0.013986728960220362,"score_gpt":0.23009606089806528,"score_spread":0.21610933193784493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2534906108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70820975,0.00066067756,0.0019515423,0.00022978599,0.000047340716,0.00023354396,0.2874202,0.00036011636,0.00088700623],"genre_scores_gemma":[0.44085783,0.00023336992,0.005499159,0.00022551895,0.000047242764,0.00068109395,0.55096614,0.00020232514,0.0012873336],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99894863,0.00022360653,0.00013546328,0.00046104295,0.0001328209,0.00009848784],"domain_scores_gemma":[0.99881434,0.0003444793,0.00019720773,0.0002874891,0.00017100257,0.00018549588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015672864,0.0006111789,0.00087309437,0.0013674553,0.0007931076,0.0008397583,0.0014832343,0.00083861843,0.0055850027],"category_scores_gemma":[0.0034478009,0.00027989378,0.0011399215,0.0015921026,0.00025872127,0.00018572694,0.0009117376,0.00058992277,0.0013274432],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012790103,0.0010067531,0.6827871,0.0027485709,0.0075938264,0.009022106,0.0008003669,0.0034625959,0.07376689,0.0009872502,0.1612414,0.04379302],"study_design_scores_gemma":[0.0030458525,0.00080254825,0.9164132,0.00013125871,0.0024145867,0.008806606,0.0004140919,0.00398537,0.0056234812,0.0006632038,0.057597846,0.00010206239],"about_ca_topic_score_codex":0.009417445,"about_ca_topic_score_gemma":0.016547939,"teacher_disagreement_score":0.009417445,"about_ca_system_score_codex":0.0003635277,"about_ca_system_score_gemma":0.000973874,"threshold_uncertainty_score":0.018725276},"labels":[],"label_agreement":null},{"id":"W2573422408","doi":"10.1016/j.jaut.2016.12.010","title":"Triggering receptor expressed on myeloid cells-1 (TREM-1) deficiency augments BAFF production to promote lupus progression","year":2017,"lang":"en","type":"article","venue":"Journal of Autoimmunity","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University Health Network","funders":"","keywords":"B-cell activating factor; Immunology; Systemic lupus erythematosus; TLR9; TLR2; Immune system; Receptor; Spleen; Immune complex; Medicine; Myeloid; Antibody; Innate immune system; Biology; B cell; Internal medicine; Disease","score_opus":0.02280771066337814,"score_gpt":0.27322582771092163,"score_spread":0.25041811704754346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2573422408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99544454,0.0012132176,0.00094533525,0.00019213308,0.000095508534,0.000041148007,0.00016114737,0.00015125971,0.0017557589],"genre_scores_gemma":[0.9965624,0.000531962,0.00082859327,0.000087262066,0.00004185091,0.00004175985,0.00016206886,0.000020812482,0.0017233065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99946636,0.0001465746,0.000053849733,0.000058945956,0.00009823412,0.0001761104],"domain_scores_gemma":[0.9994904,0.000050563955,0.00015556268,0.00005805878,0.00003265333,0.00021270767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044685966,0.00061649166,0.00042968887,0.0005380902,0.00021837797,0.000553199,0.00028669962,0.00053840113,0.0023863532],"category_scores_gemma":[0.00035412342,0.00023776853,0.00040288485,0.00013076095,0.00036966224,0.00031651507,0.00042183098,0.0016554899,0.00089301454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010272808,0.00029296702,0.0008017389,0.000099093246,0.000014765265,0.00028468683,0.000030059704,0.00014736927,0.99348664,0.00032336617,0.00021695971,0.0032750617],"study_design_scores_gemma":[0.0007559496,0.0055452143,0.02377906,0.00007761089,0.00024524776,0.0024271498,0.00023319208,0.0029512518,0.95402604,0.0009363905,0.008988461,0.000034441593],"about_ca_topic_score_codex":0.00017244884,"about_ca_topic_score_gemma":0.0003605036,"teacher_disagreement_score":0.0023863532,"about_ca_system_score_codex":0.00024843158,"about_ca_system_score_gemma":0.00040778413,"threshold_uncertainty_score":0.007983148},"labels":[],"label_agreement":null},{"id":"W2589157030","doi":"10.3389/fncel.2017.00056","title":"Divergent Neuroinflammatory Regulation of Microglial TREM Expression and Involvement of NF-κB","year":2017,"lang":"en","type":"article","venue":"Frontiers in Cellular Neuroscience","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Natural Environment Research Council; Biotechnology and Biological Sciences Research Council; Medical Research Council; Darwin Trust of Edinburgh","keywords":"TREM2; Neuroinflammation; Microglia; Receptor; Cell biology; Biology; Inflammation; NF-κB; Signal transduction; Neurodegeneration; Immunology; Internal medicine; Medicine; Biochemistry","score_opus":0.017208667053785234,"score_gpt":0.21453788502046406,"score_spread":0.19732921796667882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589157030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9952695,0.002536931,0.0009073791,0.00006604037,0.000015923139,0.000020824053,0.00018289819,0.000021197075,0.0009793958],"genre_scores_gemma":[0.9954568,0.0015678012,0.0013821357,0.00006263955,0.000017718494,0.00007124059,0.0002133319,0.000007821089,0.0012204879],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997774,0.000044885488,0.00003497873,0.00004224531,0.000039940183,0.000060613704],"domain_scores_gemma":[0.9998584,0.000015652184,0.000046765796,0.000017870412,0.000021254169,0.000040131818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028302261,0.00030043584,0.000269853,0.00029239943,0.0001622499,0.00031120452,0.00012869234,0.00021196314,0.00085181353],"category_scores_gemma":[0.00018655242,0.00013190128,0.0002940006,0.00010001764,0.00027223895,0.00024833495,0.0002652523,0.00044397704,0.0002725753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042117925,0.000024215935,0.0003935867,0.00008404551,0.0000057464486,0.00018524067,0.000050784416,0.000022088849,0.99753535,0.00007643446,0.00001578092,0.0011854518],"study_design_scores_gemma":[0.0001256837,0.0016839852,0.12335198,0.00010138553,0.0000807755,0.0043410733,0.0005557472,0.0011021276,0.86339897,0.0005626391,0.004662287,0.00003334634],"about_ca_topic_score_codex":0.00017490554,"about_ca_topic_score_gemma":0.00022679455,"teacher_disagreement_score":0.00085181353,"about_ca_system_score_codex":0.00013972438,"about_ca_system_score_gemma":0.0001685248,"threshold_uncertainty_score":0.0028495789},"labels":[],"label_agreement":null},{"id":"W2601094905","doi":"10.1080/17446651.2017.1312341","title":"Selective molecular biomarkers to predict biologic behavior in pituitary tumors","year":2017,"lang":"en","type":"article","venue":"Expert Review of Endocrinology & Metabolism","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto","funders":"","keywords":"Carcinogenesis; Pituitary tumors; Pituitary adenoma; microRNA; Cancer research; Biology; Bioinformatics; Cancer; Medicine; Adenoma; Gene; Genetics; Endocrinology","score_opus":0.0166729131805119,"score_gpt":0.3025784154504008,"score_spread":0.2859055022698889,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2601094905","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028311819,0.8846952,0.010190972,0.05707426,0.0056234696,0.00012863745,0.002007065,0.00020468567,0.011763967],"genre_scores_gemma":[0.351703,0.56598747,0.02236153,0.034012932,0.012651421,0.0002745423,0.002507674,0.00006856656,0.010432909],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9992743,0.00025958233,0.0000639888,0.00012622592,0.0002216606,0.000054288572],"domain_scores_gemma":[0.99829656,0.0007501049,0.00027036073,0.000042686403,0.0005785766,0.00006165442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019247431,0.00045795957,0.00073815417,0.0011124059,0.00016751676,0.00084084255,0.00048023774,0.0010800671,0.0030166567],"category_scores_gemma":[0.0035014967,0.000096774376,0.00048280924,0.0007933714,0.0005373983,0.0007431485,0.00032195853,0.0014751358,0.0009478082],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015464433,0.00012211583,0.08696522,0.011107189,0.00064462767,0.0027054846,0.00033775705,0.00088240165,0.03081166,0.008393435,0.141519,0.7149646],"study_design_scores_gemma":[0.0002483794,0.0012977489,0.14750957,0.011298676,0.001598036,0.019702934,0.0011739837,0.002568122,0.028737927,0.021893281,0.7637252,0.00024613366],"about_ca_topic_score_codex":0.00090940075,"about_ca_topic_score_gemma":0.0014574975,"teacher_disagreement_score":0.0030166567,"about_ca_system_score_codex":0.0005927001,"about_ca_system_score_gemma":0.00081633,"threshold_uncertainty_score":0.010179102},"labels":[],"label_agreement":null},{"id":"W2727252409","doi":"10.1182/blood.v128.22.4021.4021","title":"Investigating the Effects of Anti-CD200 Therapy for Childhood ALL","year":2016,"lang":"en","type":"article","venue":"Blood","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trillium Therapeutics (Canada)","funders":"","keywords":"Immunology; Antigen; Immune system; Monoclonal antibody; Bone marrow; Antibody; Minimal residual disease; Cancer research; Lymphocyte; Severe combined immunodeficiency; Medicine; Biology; In vivo","score_opus":0.010077993694487357,"score_gpt":0.21300519151773245,"score_spread":0.2029271978232451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2727252409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98479337,0.011049185,0.00060540315,0.00018965376,0.00008582034,0.00009148205,0.00020453337,0.000056884892,0.0029236814],"genre_scores_gemma":[0.99049604,0.0059427624,0.00074456487,0.0002132059,0.00004357951,0.000064094456,0.0003777041,0.000013608158,0.002104298],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999101,0.00002449394,0.0000061338246,0.000008779805,0.000020574258,0.000029880719],"domain_scores_gemma":[0.99991906,0.000020793792,0.000015220377,0.000007855443,0.00000828959,0.000028720702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019369091,0.0002508589,0.00042765876,0.00022532565,0.00012946036,0.00028394884,0.00017368038,0.00025338022,0.0011810675],"category_scores_gemma":[0.00010818906,0.000057105306,0.00019358123,0.00015590103,0.00012909535,0.00017023513,0.00014175399,0.000738158,0.00022993887],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009267762,0.0029886833,0.0030770723,0.0007982346,0.00015244675,0.00052693783,0.00016245013,0.0013292001,0.811617,0.0008279075,0.0015739058,0.1676783],"study_design_scores_gemma":[0.0014152137,0.08175937,0.0347272,0.0001256325,0.00042661044,0.0026136935,0.000249151,0.0019527191,0.8165769,0.00041468279,0.05971486,0.000023885748],"about_ca_topic_score_codex":0.0004874706,"about_ca_topic_score_gemma":0.0011800819,"teacher_disagreement_score":0.0011810675,"about_ca_system_score_codex":0.00028036436,"about_ca_system_score_gemma":0.00022510321,"threshold_uncertainty_score":0.0039510727},"labels":[],"label_agreement":null},{"id":"W2738534526","doi":"10.1139/cjpp-2016-0664","title":"The role of damage- and pathogen-associated molecular patterns in inflammation-mediated vulnerability of atherosclerotic plaques","year":2017,"lang":"en","type":"review","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Inflammation; HMGB1; Immunology; Rage (emotion); Pattern recognition receptor; Matrix metalloproteinase; Proinflammatory cytokine; Biology; Tumor necrosis factor alpha; Pathogen-associated molecular pattern; Innate immune system; Medicine; Immune system; Internal medicine","score_opus":0.024224416600645296,"score_gpt":0.289976928740783,"score_spread":0.26575251214013773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738534526","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012640134,0.9968065,0.00029835213,0.00040681157,0.00031271833,0.000004436078,0.000029791408,0.000009039945,0.000868404],"genre_scores_gemma":[0.00604207,0.9921605,0.0003765602,0.00026030905,0.00032376035,0.000008137051,0.000055449163,0.0000023360403,0.0007707791],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9997812,0.000042949632,0.00004597968,0.000039141756,0.000056870158,0.000033932145],"domain_scores_gemma":[0.99979764,0.0000630262,0.000039642116,0.000006138541,0.00006871219,0.00002480371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045401114,0.0004706117,0.00078292977,0.0010351441,0.00030709154,0.0009573186,0.00043071658,0.0007388607,0.0016505655],"category_scores_gemma":[0.000575715,0.00013600352,0.00042463964,0.0010312526,0.00039503837,0.0010945805,0.0005435878,0.0010065635,0.00058506435],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045206878,0.00012632797,0.00295267,0.03740227,0.0002529565,0.0018420357,0.0010192305,0.0007053922,0.026971199,0.011668647,0.033104476,0.8835026],"study_design_scores_gemma":[0.00002290102,0.00034842762,0.008425655,0.005220377,0.0003270507,0.0077573555,0.00053786463,0.00024438612,0.007187023,0.0043154433,0.9655448,0.00006867656],"about_ca_topic_score_codex":0.00070478127,"about_ca_topic_score_gemma":0.0006796424,"teacher_disagreement_score":0.0016505655,"about_ca_system_score_codex":0.0003649921,"about_ca_system_score_gemma":0.0011096172,"threshold_uncertainty_score":0.0055217147},"labels":[],"label_agreement":null},{"id":"W2749588584","doi":"10.1097/shk.0000000000000969","title":"The Atypical Chemokine Receptor ACKR2 is Protective Against Sepsis","year":2017,"lang":"en","type":"article","venue":"Shock","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Medical Research Council; Fundação de Amparo à Pesquisa do Estado de São Paulo; Conselho Nacional de Desenvolvimento Científico e Tecnológico; European Commission; Universidade de São Paulo; Coordenação de Aperfeiçoamento de Pessoal de Nível Superior; Wellcome Trust","keywords":"Sepsis; Chemokine; Chemokine receptor; Infiltration (HVAC); Kidney; Inflammation; Immunology; Lung; Medicine; Internal medicine","score_opus":0.016083691280149012,"score_gpt":0.2492647360953813,"score_spread":0.23318104481523227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2749588584","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9842919,0.009432395,0.002478667,0.0006313336,0.0002820631,0.00003357976,0.0006025201,0.00021018255,0.0020374788],"genre_scores_gemma":[0.99212766,0.0028830706,0.0011723127,0.00030890843,0.00012602322,0.0000394952,0.00084250764,0.000036718313,0.0024631852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997185,0.00006362473,0.000029474355,0.00005445865,0.000057560297,0.00007638194],"domain_scores_gemma":[0.99971896,0.000014880793,0.000102769656,0.000028414755,0.000030871997,0.00010407393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025526475,0.0005189184,0.00046891143,0.00024255594,0.00014638536,0.00040969285,0.00025525672,0.00041755574,0.0018357359],"category_scores_gemma":[0.00023650941,0.00016714897,0.0003220583,0.0001299748,0.0003015211,0.00038595908,0.00028672913,0.0008576191,0.00063033594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001014362,0.000056328616,0.00063324475,0.000109598164,0.000021160975,0.00012341351,0.00000847719,0.00007746426,0.9955047,0.00014734591,0.00025057074,0.002053385],"study_design_scores_gemma":[0.0006078423,0.005818501,0.10165047,0.00013390499,0.00033798482,0.0043407795,0.00018493627,0.0033670533,0.85700023,0.0005625344,0.025916865,0.00007891064],"about_ca_topic_score_codex":0.00015289002,"about_ca_topic_score_gemma":0.00018528508,"teacher_disagreement_score":0.0018357359,"about_ca_system_score_codex":0.00017168168,"about_ca_system_score_gemma":0.0002054611,"threshold_uncertainty_score":0.006141126},"labels":[],"label_agreement":null},{"id":"W2753715211","doi":"10.3389/fncel.2017.00256","title":"Corrigendum: Divergent Neuroinflammatory Regulation of Microglial TREM Expression and Involvement of NF-κB","year":2017,"lang":"en","type":"erratum","venue":"Frontiers in Cellular Neuroscience","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council","keywords":"Neuroinflammation; Microglia; NF-κB; Neuroscience; Expression (computer science); Cell biology; Medicine; Biology; Immunology; Inflammation; Computer science; Signal transduction","score_opus":0.02200586941821471,"score_gpt":0.21575037960705692,"score_spread":0.1937445101888422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753715211","genre_codex":"editorial","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001753806,0.0014132151,0.00047750605,0.028499916,0.9661213,0.000018354705,0.00046978862,0.00025029873,0.0025743432],"genre_scores_gemma":[0.02100482,0.01744352,0.0040495847,0.08676632,0.50360984,0.00028559502,0.004504036,0.0014107694,0.3609256],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99535394,0.00051757856,0.00084215606,0.00089159945,0.001893473,0.00050132436],"domain_scores_gemma":[0.978403,0.0029516495,0.0010671505,0.0013821166,0.014989856,0.0012061291],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033504807,0.002203613,0.0023991412,0.0024613135,0.0029665413,0.0036206602,0.0031209385,0.006236623,0.06610797],"category_scores_gemma":[0.033009045,0.0010847362,0.0019516578,0.0017467387,0.002411684,0.0020935535,0.002348405,0.0071529984,0.052250408],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041916188,0.000009253152,0.00006965817,0.0001407825,0.00001458503,0.0003167123,0.000023761671,0.00003483548,0.00016126792,0.0004915819,0.9929482,0.0057474193],"study_design_scores_gemma":[0.00003408525,0.00005191153,0.0013466869,0.0002599089,0.00006807763,0.001439627,0.000098486445,0.00023349554,0.0016008301,0.0012593077,0.9935522,0.000055388908],"about_ca_topic_score_codex":0.008329864,"about_ca_topic_score_gemma":0.011368175,"teacher_disagreement_score":0.06610797,"about_ca_system_score_codex":0.0048892833,"about_ca_system_score_gemma":0.003880556,"threshold_uncertainty_score":0.2211532},"labels":[],"label_agreement":null},{"id":"W2765178179","doi":"10.1021/acs.molpharmaceut.7b00711","title":"Novel TREM-1 Inhibitors Attenuate Tumor Growth and Prolong Survival in Experimental Pancreatic Cancer","year":2017,"lang":"en","type":"article","venue":"Molecular Pharmaceutics","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Public Health Agency of Canada","keywords":"Pancreatic cancer; Cancer research; Pharmacology; Blockade; Medicine; Cancer; In vivo; Metastasis; Receptor; Immunology; Biology; Internal medicine","score_opus":0.033381701178773454,"score_gpt":0.30917984478935445,"score_spread":0.27579814361058097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765178179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962794,0.0011894197,0.0009555879,0.000094502386,0.000056183,0.00006868301,0.00027095005,0.00009832336,0.0009869837],"genre_scores_gemma":[0.99332124,0.002004713,0.0015188293,0.000081658036,0.000026053567,0.00014528938,0.00057374727,0.000018610452,0.0023097347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999255,0.000014532955,0.0000067014716,0.000012380532,0.000012946233,0.00002787698],"domain_scores_gemma":[0.9999286,0.000010449396,0.00001826339,0.000008132022,0.0000065286586,0.000028029473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019156697,0.00048770904,0.0005094019,0.00025418404,0.00014650224,0.00019695352,0.00023752022,0.0002389911,0.0010785131],"category_scores_gemma":[0.000108061206,0.00014065798,0.00025449003,0.00016520574,0.0001931977,0.0002363,0.000118244505,0.0010465631,0.000228873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0042555355,0.0030818398,0.00034844442,0.00022014773,0.00004623441,0.00011053772,0.000042097392,0.0008735727,0.97597516,0.00022221064,0.00047474244,0.014349475],"study_design_scores_gemma":[0.00075545907,0.021898944,0.0040223105,0.000016107286,0.00008578506,0.00032383588,0.00004984423,0.0033406743,0.9659067,0.00009024178,0.0034980748,0.000012004237],"about_ca_topic_score_codex":0.00031519402,"about_ca_topic_score_gemma":0.0006665508,"teacher_disagreement_score":0.0010785131,"about_ca_system_score_codex":0.00020262979,"about_ca_system_score_gemma":0.00033943218,"threshold_uncertainty_score":0.0036079884},"labels":[],"label_agreement":null},{"id":"W2765654190","doi":"10.1038/s41598-017-14516-4","title":"TREM-1 promotes intestinal tumorigenesis","year":2017,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Bernische Krebsliga","keywords":"Carcinogenesis; Biology; Inflammation; Cancer research; Immune system; Innate immune system; Myeloid; Population; Colorectal cancer; Immunology; Cancer; Medicine; Genetics","score_opus":0.02259793363732533,"score_gpt":0.24885833399031138,"score_spread":0.22626040035298606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765654190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9967894,0.0010753759,0.0005735155,0.000118071745,0.000031264066,0.000015670026,0.00016062472,0.00007860977,0.0011574778],"genre_scores_gemma":[0.9968831,0.00046094958,0.00039164608,0.0000393161,0.000013983896,0.000011711437,0.00015397792,0.000007773722,0.0020375159],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998889,0.000028912973,0.0000075083963,0.000019181316,0.000022228256,0.00003334846],"domain_scores_gemma":[0.9997824,0.00002260485,0.000053768374,0.000016960827,0.000016459247,0.000107878026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016157892,0.00025464394,0.00021906095,0.00028634258,0.00012744818,0.0002203083,0.00009147473,0.00022923991,0.0021836057],"category_scores_gemma":[0.00012916209,0.00012897428,0.00015973988,0.00009142606,0.00018298932,0.0001361077,0.00022625459,0.00062104943,0.00054264354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095677,0.00014430849,0.001668132,0.00009363907,0.0000071325458,0.00029265633,0.00002114747,0.00007039718,0.99394375,0.000148999,0.00017573593,0.0024773404],"study_design_scores_gemma":[0.00018223579,0.0048522,0.091609575,0.000045883786,0.00006480414,0.004116717,0.00019187563,0.0038793464,0.88552123,0.00041548346,0.009105392,0.000015303503],"about_ca_topic_score_codex":0.00012492968,"about_ca_topic_score_gemma":0.00016465186,"teacher_disagreement_score":0.0021836057,"about_ca_system_score_codex":0.00016203731,"about_ca_system_score_gemma":0.00016930919,"threshold_uncertainty_score":0.007304907},"labels":[],"label_agreement":null},{"id":"W2791292621","doi":"10.1164/rccm.201709-1964le","title":"TREM-1 Response Signatures Common to Expression Profiles of Both Asthma Affection and Asthma Control","year":2018,"lang":"en","type":"letter","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health; Ontario Centres of Excellence","keywords":"Medicine; Asthma; Affection; Expression (computer science); Immunology","score_opus":0.009508059303967283,"score_gpt":0.2707146361527912,"score_spread":0.26120657684882387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791292621","genre_codex":"commentary","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35715562,0.013213884,0.005556964,0.5517576,0.027263725,0.00019236091,0.001309487,0.0003848642,0.04316552],"genre_scores_gemma":[0.81038123,0.0028935303,0.0031603873,0.13015229,0.038432512,0.00014112353,0.0005269563,0.000058531434,0.014253413],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9994522,0.0001589507,0.000063335814,0.0000792918,0.0001335164,0.000112621376],"domain_scores_gemma":[0.9990276,0.00043080858,0.000077479424,0.0000747317,0.00027458076,0.00011468967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007361773,0.00019976094,0.00041681976,0.00022501328,0.00040135952,0.0005423059,0.00020358007,0.0018337118,0.002090599],"category_scores_gemma":[0.0030571045,0.00009249255,0.00019707206,0.00016441623,0.0003784867,0.0003643088,0.00027171592,0.0018926943,0.0009991841],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031149301,0.0003307712,0.20551254,0.0005245888,0.00014554556,0.053838313,0.0011640714,0.00031664962,0.04601432,0.005992401,0.44396353,0.23908244],"study_design_scores_gemma":[0.00047417652,0.0010833796,0.2739647,0.0005233021,0.00021081544,0.12691562,0.0020189926,0.0034851877,0.012358101,0.012690523,0.5661671,0.00010807295],"about_ca_topic_score_codex":0.00024647173,"about_ca_topic_score_gemma":0.00053429726,"teacher_disagreement_score":0.002090599,"about_ca_system_score_codex":0.000341876,"about_ca_system_score_gemma":0.00024024032,"threshold_uncertainty_score":0.0069937706},"labels":[],"label_agreement":null},{"id":"W2791788131","doi":"10.1159/000485245","title":"Higher Serum Endocan Level Is Associated with Alzheimer Disease","year":2017,"lang":"en","type":"article","venue":"Dementia and Geriatric Cognitive Disorders","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Internal medicine; Pathophysiology; Montreal Cognitive Assessment; Medicine; Proinflammatory cytokine; Gastroenterology; Cognitive impairment; Endocrinology; Disease; Inflammation","score_opus":0.022016156631712684,"score_gpt":0.24232954974834706,"score_spread":0.22031339311663437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791788131","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9974558,0.0009249097,0.00017080514,0.000053777192,0.000017981727,0.0000069168764,0.00017681967,0.000015727917,0.0011773474],"genre_scores_gemma":[0.99871814,0.0002959191,0.00023194993,0.00003364948,0.000025872516,0.000006319036,0.00017287629,0.0000027358985,0.00051271374],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998808,0.000018555258,0.000020600473,0.00003166489,0.000030220266,0.000018133136],"domain_scores_gemma":[0.9994735,0.00006196231,0.0002649082,0.000024568102,0.000086730724,0.000088423876],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019043419,0.0003086157,0.00033513346,0.0007233084,0.0002719256,0.00039616183,0.00014410053,0.000348372,0.0020646339],"category_scores_gemma":[0.00059655274,0.00015840994,0.00023028531,0.00067218597,0.00015635672,0.00020446147,0.00019460483,0.00041173148,0.0002953415],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010755486,0.00009330893,0.9853867,0.000048634127,0.00011005358,0.0008772053,0.00007338921,0.00003685022,0.0056579947,0.00004495842,0.0002993981,0.0062958193],"study_design_scores_gemma":[0.000007270841,0.000119216085,0.99732167,0.000006738449,0.00004676688,0.0015319573,0.000044611137,0.000118040196,0.00043561522,0.000058145844,0.00030553856,0.0000043723903],"about_ca_topic_score_codex":0.0009821838,"about_ca_topic_score_gemma":0.0010515993,"teacher_disagreement_score":0.0020646339,"about_ca_system_score_codex":0.00015996912,"about_ca_system_score_gemma":0.00011113282,"threshold_uncertainty_score":0.0069069266},"labels":[],"label_agreement":null},{"id":"W2794024987","doi":"10.1152/ajpgi.00027.2018","title":"Protective effects of guggulsterone against colitis are associated with the suppression of TREM-1 and modulation of macrophages","year":2018,"lang":"en","type":"article","venue":"American Journal of Physiology-Gastrointestinal and Liver Physiology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Yonsei University College of Medicine; Korea Research Institute of Bioscience and Biotechnology; National Research Foundation of Korea; Korea Health Industry Development Institute; Yonsei University; Ministry of Science, ICT and Future Planning; Korean Society of Gastroenterology; National Research Foundation","keywords":"Colitis; Inflammatory bowel disease; TLR4; Cancer research; Receptor; Myeloid; Toll-like receptor; Inflammation; Signal transduction; Chemistry; Immunology; Pharmacology; Biology; Medicine; Cell biology; Innate immune system; Internal medicine; Disease","score_opus":0.004701146812092775,"score_gpt":0.19088627526166063,"score_spread":0.18618512844956786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794024987","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9944516,0.0038445515,0.0006122829,0.000097109165,0.00004063724,0.000029477507,0.00021565435,0.00007397913,0.0006347483],"genre_scores_gemma":[0.9951662,0.0027264012,0.00072841754,0.00010375571,0.000023436145,0.000040524006,0.00026105356,0.000007730816,0.000942397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99993575,0.000018478398,0.000009916975,0.0000090306885,0.000007833266,0.000018945633],"domain_scores_gemma":[0.9999312,0.0000083371815,0.000022556746,0.0000066936022,0.000006251929,0.000025050325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009060044,0.0004852536,0.00037102468,0.00026810117,0.0001016276,0.00011234021,0.00013071645,0.00024103209,0.0009004625],"category_scores_gemma":[0.00010647333,0.000102746046,0.00024948976,0.00012303388,0.00023314319,0.00013500654,0.00014340652,0.00046228114,0.00017357062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017867992,0.00011990586,0.0002626809,0.00017022324,0.000016124552,0.00016489509,0.000015289235,0.000051081435,0.9929102,0.000030351002,0.000056805155,0.0044156336],"study_design_scores_gemma":[0.0005729236,0.009616611,0.02379663,0.00003623041,0.00014746023,0.0009430378,0.00007594259,0.0004438691,0.9611963,0.000120224824,0.00303506,0.000015654194],"about_ca_topic_score_codex":0.00017782938,"about_ca_topic_score_gemma":0.0003773063,"teacher_disagreement_score":0.0009004625,"about_ca_system_score_codex":0.000078697274,"about_ca_system_score_gemma":0.00014138006,"threshold_uncertainty_score":0.0030124187},"labels":[],"label_agreement":null},{"id":"W2807664488","doi":"10.1016/j.atherosclerosissup.2018.04.261","title":"The Role of CX3CL1 and CSF1 in Maintaining Myeloid Cell Homeostasis in the Intima and Adventitia of the Aorta","year":2018,"lang":"en","type":"article","venue":"Atherosclerosis Supplements","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Adventitia; Aorta; Homeostasis; CX3CL1; Myeloid; Cell; Medicine; Cell biology; Internal medicine; Pathology; Biology; Inflammation; Chemokine; Genetics","score_opus":0.007172917083088701,"score_gpt":0.21177301713420643,"score_spread":0.20460010005111773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807664488","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9586966,0.031663712,0.00249532,0.002393783,0.00022954414,0.000049182763,0.00047518674,0.000058626403,0.003937889],"genre_scores_gemma":[0.9869086,0.006440465,0.0028061045,0.0003435009,0.00021494682,0.000038154376,0.00019935794,0.000015128353,0.0030336452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997272,0.000055040677,0.000024884506,0.000035810357,0.00007410843,0.00008292725],"domain_scores_gemma":[0.99968565,0.00003210324,0.00007975715,0.000022118737,0.000067637455,0.00011275076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043362202,0.00033610966,0.00035188047,0.0006886753,0.00048174246,0.0010724958,0.00031684837,0.00052188645,0.00080592075],"category_scores_gemma":[0.00049502536,0.00016089431,0.00022381442,0.00021071563,0.00050943904,0.00060843996,0.00065735914,0.0007355185,0.00016317941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0021391744,0.00010524364,0.009960478,0.0005369712,0.000054942022,0.0011681144,0.00037388518,0.00025602136,0.93829095,0.005303596,0.0017479189,0.040062793],"study_design_scores_gemma":[0.00030121225,0.0017050992,0.27638432,0.00054132775,0.00046427216,0.004242052,0.002073174,0.005267201,0.656093,0.008391668,0.04444448,0.000092267685],"about_ca_topic_score_codex":0.0022536274,"about_ca_topic_score_gemma":0.0023993202,"teacher_disagreement_score":0.0022536274,"about_ca_system_score_codex":0.00068510993,"about_ca_system_score_gemma":0.0012283413,"threshold_uncertainty_score":0.0049708486},"labels":[],"label_agreement":null},{"id":"W2945393348","doi":"10.1093/cid/ciz419","title":"Prognostic Accuracy of Soluble Triggering Receptor Expressed on Myeloid Cells (sTREM-1)-based Algorithms in Febrile Adults Presenting to Tanzanian Outpatient Clinics","year":2019,"lang":"en","type":"article","venue":"Clinical Infectious Diseases","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"Canadian Institutes of Health Research; Jiangsu National Synergistic Innovation Center for Advanced Materials; Bill and Melinda Gates Foundation","keywords":"Medicine; Myeloid cells; Myeloid; Algorithm; Immunology; Pediatrics","score_opus":0.020356271695124658,"score_gpt":0.29182650485855105,"score_spread":0.2714702331634264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945393348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9989297,0.00034837,0.00016720881,0.00008463796,0.000012544082,0.000017824572,0.00022763504,0.000008900237,0.00020319146],"genre_scores_gemma":[0.999209,0.00007244774,0.00039081826,0.000019202178,0.00000904194,0.000009332486,0.0002606941,9.058515e-7,0.000028640316],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99959487,0.00015657592,0.00006230678,0.00006131858,0.00005469648,0.00007027388],"domain_scores_gemma":[0.9984037,0.00045779915,0.0005914609,0.00006754074,0.00022860769,0.00025093232],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011981324,0.00043636185,0.00035145352,0.0010451449,0.0002483508,0.00048096039,0.00036355108,0.00032083679,0.0008923226],"category_scores_gemma":[0.0052536605,0.00015930545,0.0002752689,0.00044333952,0.0001593413,0.00023231708,0.00057944376,0.00034495973,0.00018158875],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015987559,0.000010790578,0.9975873,0.0000145169315,0.000013109428,0.000042018633,0.00003988212,0.00012741664,0.00018184946,0.000008923549,0.00011264304,0.0017016827],"study_design_scores_gemma":[0.000037064994,0.000334287,0.99193066,0.000053817956,0.000059869086,0.0004882534,0.0002485602,0.006201822,0.0003077774,0.000052615807,0.0002761771,0.000008980847],"about_ca_topic_score_codex":0.00278656,"about_ca_topic_score_gemma":0.0047907364,"teacher_disagreement_score":0.00278656,"about_ca_system_score_codex":0.0003940323,"about_ca_system_score_gemma":0.00039255337,"threshold_uncertainty_score":0.006336391},"labels":[],"label_agreement":null},{"id":"W2950571660","doi":"10.1093/cdn/nzz036.p13-025-19","title":"Development and Validation of a Fecal Extraction Procedure for the Assessment of Multiple Fecal Biomarkers of Intestinal Inflammation (P13-025-19)","year":2019,"lang":"en","type":"article","venue":"Current Developments in Nutrition","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Feces; Extraction (chemistry); Inflammation; Chemistry; Chromatography; Biology; Immunology; Microbiology","score_opus":0.03233730812883134,"score_gpt":0.3070676088005052,"score_spread":0.27473030067167387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2950571660","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3803824,0.0037395072,0.5929648,0.00047580595,0.0005341061,0.012015061,0.004599374,0.0014555046,0.003833446],"genre_scores_gemma":[0.18680552,0.0027103848,0.78357136,0.00051303994,0.00012322227,0.0075200778,0.012227099,0.00029366594,0.006235574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954157,0.0010755901,0.0004558096,0.0007653971,0.002049108,0.00023843914],"domain_scores_gemma":[0.99696594,0.00038328985,0.00047866767,0.00034925557,0.0015933525,0.00022940217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005782269,0.0016725289,0.0010313508,0.001798108,0.0008045856,0.0009402972,0.0014517261,0.0013652893,0.0021344025],"category_scores_gemma":[0.004644541,0.00074449566,0.0011420833,0.0011530453,0.0008273472,0.0005783899,0.0012342358,0.0012098835,0.002471089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003739953,0.0006034096,0.0050374735,0.0003403862,0.00009037701,0.00019650393,0.00007876459,0.00034552166,0.9614422,0.00021314275,0.00049975584,0.03077837],"study_design_scores_gemma":[0.0002563177,0.006765245,0.033375356,0.00023224376,0.00030007638,0.002488772,0.00012112151,0.0050834245,0.92892087,0.0002533315,0.022124916,0.000078287296],"about_ca_topic_score_codex":0.0013079839,"about_ca_topic_score_gemma":0.0026453983,"teacher_disagreement_score":0.005782269,"about_ca_system_score_codex":0.00039907423,"about_ca_system_score_gemma":0.0024224296,"threshold_uncertainty_score":0.030579865},"labels":[],"label_agreement":null},{"id":"W2952732468","doi":"10.1186/s12929-019-0539-4","title":"TREM-1-dependent M1 macrophage polarization restores intestinal epithelium damaged by DSS-induced colitis by activating IL-22-producing innate lymphoid cells","year":2019,"lang":"en","type":"article","venue":"Journal of Biomedical Science","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Far Eastern Memorial Hospital; National Health Research Institutes; Ministry of Science and Technology, Taiwan; National Yang-Ming University; Ministry of Education, India; Academia Sinica","keywords":"Innate lymphoid cell; Lamina propria; Colitis; Immunology; Inflammatory bowel disease; Innate immune system; Macrophage; Macrophage polarization; Intestinal mucosa; Proinflammatory cytokine; Intestinal epithelium; Cell biology; Immune system; Biology; Cancer research; Inflammation; Medicine; Epithelium; Pathology; Internal medicine; Disease","score_opus":0.007184043874911722,"score_gpt":0.2271461266842996,"score_spread":0.21996208280938787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952732468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99685633,0.0009559543,0.0010684129,0.000110382956,0.00004011218,0.0000462247,0.00024980976,0.0000939192,0.00057878246],"genre_scores_gemma":[0.9939095,0.0008256903,0.0021721919,0.00009231497,0.000032465923,0.00009919605,0.00047204588,0.000029155546,0.002367501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998485,0.000024310128,0.000016767981,0.000023152417,0.00003081731,0.00005629776],"domain_scores_gemma":[0.9998048,0.0000090639205,0.00005634729,0.000015662306,0.00001770559,0.00009640276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020549716,0.00049035606,0.0005386827,0.0003690928,0.00019199248,0.00025059236,0.00028292876,0.00041198317,0.0015153592],"category_scores_gemma":[0.0001232423,0.00016182623,0.0003267244,0.000120026096,0.00033967287,0.00022244031,0.00023821602,0.0010893376,0.0005510201],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070924195,0.00023379209,0.0002610645,0.00012795134,0.00000972641,0.00010148093,0.0000245693,0.00007274384,0.99625814,0.000075786105,0.00007862192,0.0020469187],"study_design_scores_gemma":[0.00027899066,0.004260033,0.008436848,0.000047497866,0.00007333386,0.0008428927,0.0000971173,0.0013257237,0.98003995,0.0001395232,0.0044446476,0.00001334251],"about_ca_topic_score_codex":0.00015717707,"about_ca_topic_score_gemma":0.00028748627,"teacher_disagreement_score":0.0015153592,"about_ca_system_score_codex":0.00016199345,"about_ca_system_score_gemma":0.0003322674,"threshold_uncertainty_score":0.005069375},"labels":[],"label_agreement":null},{"id":"W2962482334","doi":"10.3389/fnins.2019.00742","title":"A Candidate Regulatory Variant at the TREM Gene Cluster Confer Alzheimer’s Disease Risk by Modulating Both Amyloid-β Pathology and Neuronal Degeneration","year":2019,"lang":"en","type":"article","venue":"Frontiers in Neuroscience","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; Canadian Institutes of Health Research; National Institutes of Health; H. Lundbeck A/S; Servier; Eisai; Genentech; IXICO; National Natural Science Foundation of China; Pfizer; Novartis Pharmaceuticals Corporation; Meso Scale Diagnostics; Northern California Institute for Research and Education; F. Hoffmann-La Roche; University of Southern California; BioClinica; Bristol-Myers Squibb; Eli Lilly and Company; Biogen; Foundation for the National Institutes of Health","keywords":"TREM2; Dementia; Alzheimer's Disease Neuroimaging Initiative; Cerebrospinal fluid; Pathogenesis; Disease; Neuroimaging; Internal medicine; Medicine; Alzheimer's disease; Amyloid (mycology); Oncology; Psychology; Pathology; Receptor; Neuroscience","score_opus":0.008404174014881369,"score_gpt":0.1997550338281931,"score_spread":0.19135085981331174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962482334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999102,0.000097688506,0.00035467205,0.000035984307,0.000007491291,0.0000058962323,0.00018799322,0.000010617764,0.00019773445],"genre_scores_gemma":[0.9989281,0.000035694655,0.0005121974,0.000032606655,0.000012957469,0.000007413649,0.00019698903,0.0000081089165,0.00026588637],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996921,0.00010816052,0.000034296638,0.00010072789,0.0000348577,0.000029967112],"domain_scores_gemma":[0.9993606,0.00026019217,0.00018656076,0.00006118996,0.000048483646,0.00008294041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049009436,0.0006755727,0.00040490413,0.0005667214,0.0003517889,0.00027120142,0.00033239537,0.0007768869,0.0036511368],"category_scores_gemma":[0.0010595003,0.00017785348,0.0006215673,0.00058232277,0.00024503,0.00012449383,0.00023118728,0.0003314369,0.00033777923],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.014211531,0.00062527054,0.69801396,0.00018367026,0.0023568664,0.010153103,0.0006661867,0.0016650269,0.2540275,0.001142498,0.0010800709,0.015874444],"study_design_scores_gemma":[0.0002475353,0.0008306254,0.9814317,0.000036751986,0.00083801226,0.0052896673,0.00015986501,0.0027676069,0.006784292,0.00073470816,0.000850227,0.0000290068],"about_ca_topic_score_codex":0.0016059445,"about_ca_topic_score_gemma":0.0016296105,"teacher_disagreement_score":0.0036511368,"about_ca_system_score_codex":0.00013189387,"about_ca_system_score_gemma":0.00019120236,"threshold_uncertainty_score":0.012214303},"labels":[],"label_agreement":null},{"id":"W2975268492","doi":"","title":"Role of C-reactive Protein and Tumor Necrosis Factor-Alpha in Differentiating between Ventilator-Associated Pneumonia and Systemic Inflammatory Response Syndrome without Infectious Etiology.","year":2016,"lang":"en","type":"article","venue":"PubMed","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Etiology; Systemic inflammatory response syndrome; Pneumonia; Ventilator-associated pneumonia; Internal medicine; C-reactive protein; Tumor necrosis factor alpha; Intensive care unit; Gastroenterology; APACHE II; Prospective cohort study; Immunology; Inflammation; Sepsis","score_opus":0.008273256428739745,"score_gpt":0.18763266509466947,"score_spread":0.17935940866592973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975268492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961886,0.0030331165,0.00029286195,0.00008803539,0.000024521963,0.000022134172,0.00010121753,0.000003852348,0.00024584637],"genre_scores_gemma":[0.9989913,0.0002797241,0.00052324083,0.00002054557,0.00003102197,0.000009576208,0.000104084706,6.866986e-7,0.000039776325],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99884856,0.00045408626,0.00018201425,0.00017764502,0.00025021876,0.00008746276],"domain_scores_gemma":[0.99468404,0.002189175,0.0018543688,0.00019083027,0.0004302371,0.00065132976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023824617,0.00043385083,0.0004382791,0.00070533564,0.00019946745,0.0005434075,0.00037249064,0.0006310233,0.00059393456],"category_scores_gemma":[0.0052882824,0.00019451967,0.0003552103,0.00041359436,0.00037836007,0.00045353983,0.0003898905,0.00060622965,0.00019388678],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000906751,0.00011939916,0.9939434,0.00003603485,0.000044956363,0.0001391002,0.000024911671,0.00004443629,0.0007297316,0.000008143251,0.000037889593,0.003965282],"study_design_scores_gemma":[0.000053164793,0.0013752844,0.9946608,0.000030948,0.000115516414,0.0017542628,0.00012652596,0.0010129876,0.000642988,0.000050455714,0.0001701009,0.000006965176],"about_ca_topic_score_codex":0.00044055085,"about_ca_topic_score_gemma":0.00075554784,"teacher_disagreement_score":0.0023824617,"about_ca_system_score_codex":0.00019192476,"about_ca_system_score_gemma":0.00040670298,"threshold_uncertainty_score":0.012599766},"labels":[],"label_agreement":null},{"id":"W2982673033","doi":"10.3760/cma.j.issn.2095-4352.2019.05.018","title":"[Clinical study on the factors associated with long-term cognitive function in patients with sepsis].","year":2019,"lang":"zh","type":"article","venue":"PubMed","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Montreal Cognitive Assessment; Sepsis; Univariate analysis; Logistic regression; Cognition; Internal medicine; Intensive care unit; Statistical significance; Clinical significance; Cognitive impairment; Multivariate analysis; Pediatrics; Psychiatry","score_opus":0.03730951055216626,"score_gpt":0.23763335679708167,"score_spread":0.2003238462449154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982673033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936907,0.003632376,0.00012952149,0.0003150476,0.00009552037,0.0001235251,0.0010004165,0.000005201578,0.0010076948],"genre_scores_gemma":[0.9964646,0.0011435235,0.00023315892,0.00023693478,0.0001240896,0.00013301297,0.0012421304,0.000001170235,0.00042117218],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99983585,0.000041578114,0.000030670908,0.000024786876,0.000032387088,0.000034706634],"domain_scores_gemma":[0.9995221,0.000034086795,0.00014915489,0.00001684189,0.00012221557,0.00015554002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049262564,0.00035587026,0.00037158604,0.0005328227,0.00040867805,0.00028068986,0.00027225117,0.00040739035,0.0012786344],"category_scores_gemma":[0.00093792035,0.00012708508,0.00039031333,0.00072926766,0.00016029067,0.0002629248,0.0002578301,0.0004511199,0.00029510199],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00071066,0.00020228965,0.99123985,0.00016727607,0.0000974461,0.00040400634,0.00007630236,0.000040829873,0.0003176129,0.000017011726,0.00072129734,0.0060054106],"study_design_scores_gemma":[0.00007624722,0.0008834667,0.9975975,0.000044569126,0.0000490834,0.0006292281,0.000112630434,0.00007327562,0.000053712713,0.000019663197,0.00045499566,0.0000055693536],"about_ca_topic_score_codex":0.0023197082,"about_ca_topic_score_gemma":0.0026502234,"teacher_disagreement_score":0.0023197082,"about_ca_system_score_codex":0.00018033157,"about_ca_system_score_gemma":0.0007125373,"threshold_uncertainty_score":0.004612386},"labels":[],"label_agreement":null},{"id":"W2993605366","doi":"","title":"miRNA-34a down-regulates the triggering receptor and phagocytosis sensor TREM2 in age-related macular degeneration (AMD)","year":2015,"lang":"en","type":"article","venue":"Investigative Ophthalmology & Visual Science","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Macular degeneration; Phagocytosis; TREM2; microRNA; Medicine; Receptor; Ophthalmology; Biology; Immunology; Internal medicine; Gene; Genetics; Myeloid cells","score_opus":0.044719072240273876,"score_gpt":0.29163302244629785,"score_spread":0.24691395020602397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2993605366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9890126,0.004762337,0.0025484303,0.00039834707,0.00027851333,0.000043122855,0.0006668564,0.00025893882,0.0020309198],"genre_scores_gemma":[0.99506193,0.000969268,0.0014278882,0.0001906437,0.000034786342,0.00004760782,0.00034594757,0.000033340308,0.0018885799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99965477,0.000053521177,0.000041824533,0.00007666123,0.00009751352,0.00007576868],"domain_scores_gemma":[0.99984455,0.000022615961,0.000052430652,0.0000141031505,0.000033023036,0.000033292705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032256686,0.00028385522,0.0005074324,0.00034770876,0.00027981025,0.00043917785,0.00025456867,0.00051920733,0.0018784648],"category_scores_gemma":[0.00045779592,0.0003030497,0.0005302805,0.00015613562,0.00029243258,0.00024539404,0.00034590898,0.00083156547,0.00064183096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022063577,0.00015272152,0.0025403537,0.00023551464,0.00008996059,0.00037961142,0.000057879213,0.00017312466,0.98428094,0.00040867046,0.0007889403,0.008685899],"study_design_scores_gemma":[0.0005023555,0.001928853,0.06875129,0.000052982028,0.00052283634,0.0029073984,0.00020452171,0.005027864,0.90332866,0.00095626997,0.01576485,0.00005213073],"about_ca_topic_score_codex":0.0005896889,"about_ca_topic_score_gemma":0.0006238323,"teacher_disagreement_score":0.0018784648,"about_ca_system_score_codex":0.0002689732,"about_ca_system_score_gemma":0.00036977115,"threshold_uncertainty_score":0.0062841177},"labels":[],"label_agreement":null},{"id":"W3013245496","doi":"10.13201/j.issn.1001-1781.2018.07.002","title":"[Correlation study between the levels of serum MCP-1,SAA and cognitive function in patients with COPD-OSAHS].","year":2018,"lang":"en","type":"article","venue":"PubMed","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Internal medicine; Medicine; Gastroenterology; Montreal Cognitive Assessment; Correlation; Obstructive sleep apnea; Serum amyloid A; COPD; Cognition; Serum Amyloid A Protein; Hypopnea; Negative correlation; Cognitive impairment; Endocrinology; Apnea; Disease; Polysomnography; Inflammation; Psychiatry","score_opus":0.017909753016050942,"score_gpt":0.19899736106340363,"score_spread":0.1810876080473527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013245496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968004,0.0016735224,0.00018765123,0.00010427236,0.000071056056,0.000033524742,0.0004882943,0.000008306513,0.0006330325],"genre_scores_gemma":[0.9983163,0.00035825255,0.00020185858,0.00009045694,0.00006364525,0.000021800768,0.00045213962,9.685972e-7,0.00049461535],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99991596,0.000012535338,0.000013514177,0.000017704384,0.000017775543,0.000022548269],"domain_scores_gemma":[0.99980026,0.000020180718,0.00005888181,0.000009492563,0.000047349517,0.00006386435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028376566,0.0002970879,0.00029688462,0.0006364262,0.00035142654,0.0003062831,0.0001296165,0.0003572062,0.0014536545],"category_scores_gemma":[0.0005342013,0.0001437481,0.00043894388,0.0005887513,0.00014418451,0.0002126137,0.0001913001,0.00041119923,0.00020900919],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018857875,0.0002471905,0.984844,0.00011685465,0.00025847918,0.0005662612,0.00013352897,0.00004239842,0.0029544726,0.000048472633,0.0006747213,0.008227847],"study_design_scores_gemma":[0.00006049133,0.000865454,0.99672794,0.000017043774,0.00015247759,0.00079884205,0.00014227825,0.000164922,0.00049350056,0.00007095115,0.0004969884,0.000009058875],"about_ca_topic_score_codex":0.002116936,"about_ca_topic_score_gemma":0.0023041964,"teacher_disagreement_score":0.002116936,"about_ca_system_score_codex":0.00013962915,"about_ca_system_score_gemma":0.00026901966,"threshold_uncertainty_score":0.0048630238},"labels":[],"label_agreement":null},{"id":"W3028885247","doi":"10.3760/cma.j.issn.1674-6554.2016.09.010","title":"Correlation between plasma NGAL and ET-1 levels and cognitive dysfunction in patients with chronic obstructive pulmonary disease","year":2016,"lang":"en","type":"article","venue":"Zhonghua xingwei yixue yu naokexue zazhi","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Internal medicine; Medicine; COPD; Montreal Cognitive Assessment; Gastroenterology; Cognition; Pulmonary disease; Endocrinology; Cognitive impairment; Disease; Psychiatry","score_opus":0.008865505822076547,"score_gpt":0.1992213355073957,"score_spread":0.19035582968531917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3028885247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993099,0.0003507429,0.000049579274,0.00001985488,0.000006537593,0.0000040389446,0.000070505135,0.0000019446347,0.00018693454],"genre_scores_gemma":[0.9996872,0.000064246546,0.000050106217,0.00001555557,0.000015324704,0.0000041274643,0.00007256043,6.4732836e-7,0.00009025461],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997137,0.000064573884,0.000037089612,0.00007090301,0.000063276435,0.00005038048],"domain_scores_gemma":[0.999106,0.00023348643,0.0003449294,0.000045461366,0.00011241489,0.00015771264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044171608,0.00042597431,0.00042394438,0.0007426359,0.00042925632,0.0005000458,0.00020511306,0.0005286192,0.0011306754],"category_scores_gemma":[0.0016261355,0.00021255715,0.00028679502,0.0004609204,0.00028443767,0.00027607314,0.00023102532,0.000432996,0.00013747571],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044275488,0.00007774188,0.9976234,0.000012497202,0.00007423433,0.0002196175,0.00004804567,0.000019979576,0.0006439613,0.000009647534,0.000035896457,0.0007922208],"study_design_scores_gemma":[0.000018378383,0.00021791877,0.9985884,0.0000038349035,0.000038773138,0.0007454989,0.00007087299,0.00012093293,0.000097499265,0.000017737288,0.00007732868,0.0000027833955],"about_ca_topic_score_codex":0.0012792733,"about_ca_topic_score_gemma":0.0013061756,"teacher_disagreement_score":0.0012792733,"about_ca_system_score_codex":0.00015301544,"about_ca_system_score_gemma":0.00012352114,"threshold_uncertainty_score":0.0037824512},"labels":[],"label_agreement":null},{"id":"W3029691603","doi":"10.3760/cma.j.issn.0254-9026.2015.04.013","title":"Relating factors analysis of cognition dysfunction in patients with acute exacerbation of chronic obstructive pulmonary disease","year":2015,"lang":"en","type":"article","venue":"Zhonghua laonian yixue zazhi","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; COPD; Internal medicine; Exacerbation; Montreal Cognitive Assessment; Acute exacerbation of chronic obstructive pulmonary disease; Depression (economics); Body mass index; Cognition; Hamd; Pulmonary function testing; Gastroenterology; Cognitive impairment; Disease; Psychiatry; Significant difference","score_opus":0.010527339109244213,"score_gpt":0.2040572931604734,"score_spread":0.1935299540512292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029691603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985252,0.00078066887,0.0000734302,0.000044037515,0.00001119371,0.000009342755,0.00014392588,0.0000027051217,0.0004094448],"genre_scores_gemma":[0.99961877,0.00009672866,0.000059893573,0.000015848635,0.000011825336,0.0000040819705,0.00012434216,5.233624e-7,0.0000679951],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996555,0.00007810221,0.000050889197,0.000061959174,0.00008874235,0.00006476037],"domain_scores_gemma":[0.9994112,0.00007963669,0.00028339244,0.00002496272,0.00008285622,0.000117951815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003096487,0.00041165142,0.0004915693,0.0009449868,0.00051091274,0.00049851474,0.00020147656,0.00035895896,0.0010609294],"category_scores_gemma":[0.0015099805,0.00013442065,0.0007604792,0.00082902226,0.00019152169,0.0002464809,0.00033915575,0.000407672,0.00013573418],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012262119,0.000030106581,0.9980925,0.000012504306,0.000061816776,0.000084324616,0.000033066557,0.000019671603,0.00012211283,0.000005036422,0.00004183103,0.0013743789],"study_design_scores_gemma":[0.0000037225786,0.00008126321,0.9994099,0.0000039605416,0.000028265935,0.0002184888,0.00006808847,0.00008737856,0.000025567384,0.000015871577,0.000055220815,0.0000022495703],"about_ca_topic_score_codex":0.0035362004,"about_ca_topic_score_gemma":0.0044384506,"teacher_disagreement_score":0.0035362004,"about_ca_system_score_codex":0.00022920688,"about_ca_system_score_gemma":0.00026448412,"threshold_uncertainty_score":0.0070312023},"labels":[],"label_agreement":null},{"id":"W3032128691","doi":"10.1038/s41598-020-65528-6","title":"The Effect of Corrected Inflammation, Oxidative Stress and Endothelial Dysfunction on Fmd Levels in Patients with Selected Chronic Diseases: A Quasi-Experimental Study","year":2020,"lang":"en","type":"article","venue":"Scientific Reports","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":68,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Western Ontario; Western University","funders":"","keywords":"Endothelial dysfunction; Oxidative stress; Medicine; Malondialdehyde; Internal medicine; PTX3; Inflammation; Asymmetric dimethylarginine; C-reactive protein; Superoxide dismutase; Endocrinology; Immunology; Gastroenterology; Arginine; Biochemistry; Chemistry","score_opus":0.0055932010147267215,"score_gpt":0.2084311758917603,"score_spread":0.2028379748770336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3032128691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99958724,0.00011462038,0.00008413819,0.000008921185,0.0000072038247,0.000054777967,0.000033830158,0.0000013905513,0.000107951026],"genre_scores_gemma":[0.99905854,0.00009371582,0.00026288617,0.00004115303,0.00003618936,0.00013909151,0.00013027145,0.0000014411733,0.00023680579],"study_design_codex":"observational","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9992854,0.00037284108,0.000047934707,0.00012870587,0.00006953625,0.000095650736],"domain_scores_gemma":[0.9988312,0.0002833452,0.00020109801,0.00028521207,0.000102549515,0.00029657307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015790436,0.0005102265,0.00079116394,0.00037801504,0.00070514216,0.00036993402,0.00023032985,0.0004959979,0.0015713127],"category_scores_gemma":[0.0011672087,0.00029041464,0.00071172835,0.00029666617,0.0007191121,0.0004046099,0.00040376897,0.00059811043,0.0002461967],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.15583377,0.068993926,0.7076944,0.00033671173,0.0008228103,0.0007629334,0.0014492575,0.0002776365,0.042745467,0.00028824512,0.00043888798,0.02035597],"study_design_scores_gemma":[0.0033488686,0.2845986,0.70389783,0.000015232527,0.000357672,0.00053353026,0.00061135076,0.00044733178,0.004547853,0.00013293163,0.001479723,0.000029085331],"about_ca_topic_score_codex":0.00039114506,"about_ca_topic_score_gemma":0.00052206207,"teacher_disagreement_score":0.0015790436,"about_ca_system_score_codex":0.0002454776,"about_ca_system_score_gemma":0.0003885414,"threshold_uncertainty_score":0.008350909},"labels":[],"label_agreement":null},{"id":"W3033819416","doi":"10.1136/annrheumdis-2020-eular.4953","title":"FRI0547 THE EFFECT OF CORRECTED INFLAMMATION, OXIDATIVE STRESS AND ENDOTHELIAL DYSFUNCTION ON FMD LEVELS IN PATIENTS WITH SELECTED CHRONIC DISEASES: A QUASI-EXPERIMENTAL STUDY","year":2020,"lang":"en","type":"article","venue":"Annals of the Rheumatic Diseases","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Medicine; Endothelial dysfunction; Oxidative stress; Internal medicine; Malondialdehyde; Inflammation; Asymmetric dimethylarginine; Immunology; C-reactive protein; Gastroenterology; Endocrinology; Biochemistry; Arginine","score_opus":0.012008927804868008,"score_gpt":0.23499695659789224,"score_spread":0.22298802879302423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033819416","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99923253,0.00021312626,0.00012036306,0.000025768893,0.000025408754,0.0000786961,0.00011374931,0.000005624792,0.00018484672],"genre_scores_gemma":[0.9980324,0.00016626106,0.00043026186,0.0000694843,0.00006295765,0.00023382483,0.00020439347,0.000005074485,0.0007955143],"study_design_codex":"randomized_trial","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.9992879,0.00030297853,0.00004183391,0.00014647689,0.000071820476,0.00014899086],"domain_scores_gemma":[0.9990164,0.00029691105,0.00012956657,0.00022970131,0.000060786188,0.0002666702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016353497,0.00072992267,0.0013731382,0.00038056597,0.00083165814,0.0006541621,0.000392397,0.00082234095,0.0041598845],"category_scores_gemma":[0.0012121795,0.00036734014,0.0010738376,0.00033176094,0.0010515713,0.00055936136,0.00043770042,0.0013105714,0.0005108149],"study_design_candidate":"nonrandomized_trial","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.72601396,0.10792638,0.043227848,0.0004933053,0.00094080175,0.00033919644,0.00090084574,0.0004997356,0.08755843,0.00041977703,0.0007068551,0.03097286],"study_design_scores_gemma":[0.019279968,0.7564596,0.20651458,0.000026901256,0.000766407,0.00030004955,0.00053885113,0.00070147426,0.013327763,0.0002232311,0.0017957687,0.00006555557],"about_ca_topic_score_codex":0.0006885398,"about_ca_topic_score_gemma":0.0007839444,"teacher_disagreement_score":0.0041598845,"about_ca_system_score_codex":0.00036877644,"about_ca_system_score_gemma":0.00063955004,"threshold_uncertainty_score":0.013916254},"labels":[],"label_agreement":null},{"id":"W3035391663","doi":"10.21608/mjcu.2020.93996","title":"Endothelial-Specific Molecule 1 (Endocan) as a Marker of Vascular Endothelial Regulation of Obesity-Associated Peripheral Polyneuropathy in the Non-Diabetic Obese Patients","year":2020,"lang":"en","type":"article","venue":"The Medical Journal of Cairo University/The Medical Journal of Cairo University","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Peripheral; Obesity; Diabetes mellitus; Polyneuropathy; Internal medicine; Endocrinology","score_opus":0.005882581313688596,"score_gpt":0.17856109260983463,"score_spread":0.17267851129614603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035391663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988024,0.00068277883,0.00009876865,0.000016706184,0.0000050609324,0.000006611379,0.00008890514,0.0000025188358,0.00029626317],"genre_scores_gemma":[0.99932206,0.00016879171,0.0001683994,0.000024814713,0.0000063438392,0.000008094618,0.00009293586,6.770686e-7,0.00020783508],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999045,0.00002238966,0.000009712996,0.000028587476,0.000020493246,0.000014333427],"domain_scores_gemma":[0.9997421,0.00005413031,0.000109747714,0.000009193446,0.000039704228,0.00004510214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019219617,0.0001901914,0.00018890965,0.00033231016,0.00020047417,0.00028316973,0.00011473791,0.00019084773,0.0012902213],"category_scores_gemma":[0.00055051164,0.00011087561,0.0001422938,0.00036636228,0.00008545498,0.00015811672,0.00013739301,0.00031164216,0.00010209316],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000833479,0.0001556564,0.98856735,0.000054103853,0.000085349224,0.00028357803,0.00007340258,0.0000545873,0.0043946896,0.00002195692,0.0001076924,0.0053680413],"study_design_scores_gemma":[0.000017608547,0.00050078175,0.99760854,0.000010098295,0.000050791583,0.0008881988,0.00007208503,0.00020790733,0.00041725487,0.00002590934,0.00019717618,0.0000036307745],"about_ca_topic_score_codex":0.0005705446,"about_ca_topic_score_gemma":0.00072036765,"teacher_disagreement_score":0.0012902213,"about_ca_system_score_codex":0.00011129571,"about_ca_system_score_gemma":0.00008487593,"threshold_uncertainty_score":0.0043162704},"labels":[],"label_agreement":null},{"id":"W3037195467","doi":"10.1016/j.cyto.2020.155175","title":"Dysregulation of angiopoietin-Tie-2 axis in ugandan children hospitalized with pneumonia","year":2020,"lang":"en","type":"article","venue":"Cytokine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Women and Children’s Health Research Institute; University of Alberta","funders":"Grand Challenges Canada; Women and Children's Health Research Institute","keywords":"Medicine; Pneumonia; Internal medicine; Tachypnea; Prospective cohort study; Gastroenterology","score_opus":0.007603486022828045,"score_gpt":0.1889241007415964,"score_spread":0.18132061471876837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3037195467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9982632,0.0011199946,0.00006851173,0.00010387492,0.000012942276,0.000008378408,0.00008619741,0.000002603758,0.00033425778],"genre_scores_gemma":[0.99900633,0.0005353543,0.00014795928,0.000062903324,0.000011494778,0.000017917411,0.00006895341,0.0000011072351,0.00014806853],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9996512,0.000095495125,0.000041832078,0.000046181598,0.00004015818,0.00012518765],"domain_scores_gemma":[0.9995353,0.00010351934,0.00021540067,0.000012261535,0.00006316741,0.00007036633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002203524,0.0002941007,0.0003390258,0.000402202,0.00054916635,0.00085337256,0.00021027931,0.00043458678,0.0007630083],"category_scores_gemma":[0.0014159328,0.00030613362,0.00017151756,0.00042380212,0.00036973343,0.00040462267,0.00058616116,0.0007592968,0.00007705957],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043476652,0.000082720646,0.9859174,0.00016602364,0.00005160329,0.002544237,0.0013596143,0.00012069266,0.0022973707,0.0001249085,0.00031575837,0.006584963],"study_design_scores_gemma":[0.000018705943,0.00028045394,0.9872569,0.00021166807,0.00008192267,0.0034417445,0.0057282294,0.00044411747,0.0009198651,0.00017833896,0.0014228085,0.000015406207],"about_ca_topic_score_codex":0.0038210372,"about_ca_topic_score_gemma":0.0046472885,"teacher_disagreement_score":0.0038210372,"about_ca_system_score_codex":0.00049606146,"about_ca_system_score_gemma":0.00072824646,"threshold_uncertainty_score":0.0075976253},"labels":[],"label_agreement":null},{"id":"W3047482558","doi":"10.1002/hep.31499","title":"Tacrolimus Impairs Kupffer Cell Capacity to Control Bacteremia: Why Transplant Recipients Are Susceptible to Infection","year":2020,"lang":"en","type":"article","venue":"Hepatology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Toronto General Hospital; University of Calgary","funders":"Alberta Innovates; Deutsche Forschungsgemeinschaft; Canadian Institutes of Health Research; Canadian Liver Foundation; Toronto General and Western Hospital Foundation; American Society of Transplantation","keywords":"Tacrolimus; Calcineurin; Bacteremia; Immunology; Innate immune system; Liver transplantation; Biology; Population; Transplantation; Microbiology; Medicine; Immune system; Internal medicine; Antibiotics","score_opus":0.021423522003900554,"score_gpt":0.2073615628081274,"score_spread":0.18593804080422685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047482558","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962154,0.0026074194,0.0004954309,0.00013053232,0.000023043443,0.000008516332,0.000037195325,0.00003056935,0.00045185338],"genre_scores_gemma":[0.998771,0.0006800261,0.00019771834,0.0000551501,0.000022077604,0.0000076218594,0.000041177926,0.0000061707806,0.00021905598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997286,0.000050066643,0.00003519472,0.00003636841,0.00007030266,0.000079406665],"domain_scores_gemma":[0.99958915,0.000042939093,0.00015716896,0.000048385573,0.00004491703,0.00011745642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030423191,0.00021370286,0.00032976078,0.0002696935,0.00017979572,0.00051726284,0.00017487585,0.00026245016,0.0008524181],"category_scores_gemma":[0.00045742292,0.00008456263,0.0002027156,0.00014855151,0.00024083795,0.00031038138,0.00015788757,0.00048499397,0.0002867671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016960648,0.00029759214,0.0506319,0.0001913788,0.00006959358,0.0007080375,0.00010231906,0.00014723215,0.917478,0.00023400704,0.00033067729,0.028113257],"study_design_scores_gemma":[0.000087233566,0.0035521714,0.5816188,0.000076161676,0.00034551395,0.009515273,0.00043666686,0.0019330067,0.3963139,0.00034411967,0.0057471627,0.00002999512],"about_ca_topic_score_codex":0.00015240039,"about_ca_topic_score_gemma":0.0001748505,"teacher_disagreement_score":0.0008524181,"about_ca_system_score_codex":0.00017209437,"about_ca_system_score_gemma":0.00015878362,"threshold_uncertainty_score":0.0028516054},"labels":[],"label_agreement":null},{"id":"W3092054289","doi":"10.1016/j.jaci.2020.10.001","title":"COVID-19 risk stratification algorithms based on sTREM-1 and IL-6 in emergency department","year":2020,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":80,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"National Research Council Canada; Canadian Institutes of Health Research; Fast Grants; Centre Hospitalier Universitaire Vaudois; Université de Lausanne; Fondation Leenaards; Canada Research Chairs","keywords":"Receiver operating characteristic; Medicine; Emergency department; Intubation; Area under the curve; Likelihood ratios in diagnostic testing; Coronavirus disease 2019 (COVID-19); Algorithm; Internal medicine; Emergency medicine; Observational study; Surgery; Disease; Infectious disease (medical specialty)","score_opus":0.04064990094974523,"score_gpt":0.3143770243996507,"score_spread":0.27372712344990546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092054289","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9093105,0.01295063,0.041564696,0.0038031344,0.0012427478,0.0012119738,0.015249825,0.0010922463,0.013574136],"genre_scores_gemma":[0.9202931,0.0028803966,0.05132942,0.0010708923,0.00065403717,0.0008017596,0.01926981,0.00013218276,0.0035683443],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.998838,0.00032370497,0.00018763213,0.00017837687,0.0002911929,0.00018099695],"domain_scores_gemma":[0.9981754,0.0005745581,0.00034482346,0.000098545905,0.0004059297,0.00040081117],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023075182,0.0010572653,0.0015739384,0.0020293968,0.00041829236,0.002184201,0.0012581354,0.0008329223,0.00407275],"category_scores_gemma":[0.0059340163,0.00036691595,0.0018491343,0.00077080383,0.00018027931,0.0007040043,0.0018102635,0.0014949199,0.0013040227],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.011164635,0.0005565939,0.7935311,0.0004715366,0.001475216,0.00035766853,0.00010902595,0.0093583185,0.0017670519,0.002234608,0.017379073,0.16159512],"study_design_scores_gemma":[0.003863194,0.003741295,0.66322786,0.0017800629,0.0047084196,0.0024313887,0.0005889979,0.262266,0.007217834,0.014013296,0.035808228,0.00035339338],"about_ca_topic_score_codex":0.001736192,"about_ca_topic_score_gemma":0.0031711208,"teacher_disagreement_score":0.00407275,"about_ca_system_score_codex":0.0006287588,"about_ca_system_score_gemma":0.0015965566,"threshold_uncertainty_score":0.013624728},"labels":[],"label_agreement":null},{"id":"W3097501875","doi":"","title":"OP-087 : Structural brain change and cognitive dysfunction in COPD patients","year":2019,"lang":"en","type":"article","venue":"대한결핵및호흡기학회 추계학술발표초록집","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; Montreal Cognitive Assessment; Internal medicine; Cardiology; Cognition; COPD; Stroke (engine); Comorbidity; Exacerbation; Dementia; Depression (economics); Quality of life (healthcare); Psychiatry","score_opus":0.013563907650464687,"score_gpt":0.21301384206034712,"score_spread":0.19944993440988243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097501875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9968567,0.0009485321,0.000068628884,0.00020368616,0.000019079922,0.00002228128,0.00037635484,0.000005949048,0.0014986546],"genre_scores_gemma":[0.99864215,0.00022130288,0.00008730868,0.000083946405,0.000036563393,0.00001912126,0.00040719708,0.0000018984284,0.00050052436],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99986327,0.000018765346,0.000019151708,0.00003323154,0.000035867528,0.000029689008],"domain_scores_gemma":[0.99968255,0.000036222256,0.0001293384,0.000010067617,0.00006433073,0.00007753435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021293931,0.00032020698,0.00033949903,0.0005612575,0.0005603162,0.00053975376,0.00027933848,0.0006571565,0.003500372],"category_scores_gemma":[0.00073757017,0.00010805935,0.00040712656,0.00048997294,0.00021186759,0.000279261,0.00033923564,0.00056177477,0.00037604917],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004440405,0.00016384272,0.992814,0.0000659169,0.00008896988,0.00072188047,0.000058385885,0.000039118742,0.00087034225,0.000030616022,0.00035241686,0.004350485],"study_design_scores_gemma":[0.000011985165,0.00016373461,0.99813026,0.00001228512,0.000050870123,0.0010968113,0.00006273049,0.00010238855,0.00009681942,0.00005602645,0.00021305098,0.0000029590203],"about_ca_topic_score_codex":0.0022866053,"about_ca_topic_score_gemma":0.0033096562,"teacher_disagreement_score":0.003500372,"about_ca_system_score_codex":0.00027882654,"about_ca_system_score_gemma":0.00033641467,"threshold_uncertainty_score":0.0117099285},"labels":[],"label_agreement":null},{"id":"W3106939516","doi":"10.15698/cst2020.12.237","title":"TLR4: the fall guy in sepsis?","year":2020,"lang":"en","type":"letter","venue":"Cell Stress","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"La Trobe University; Strategic Innovation Fund","keywords":"Sepsis; Cytokine storm; Immune system; Immunology; Medicine; Population; Inflammation; Disease; Internal medicine; Infectious disease (medical specialty)","score_opus":0.015006335407753594,"score_gpt":0.20131582833109196,"score_spread":0.18630949292333837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106939516","genre_codex":"review","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"commentary","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013650584,0.57125217,0.00445521,0.38755965,0.013468524,0.00002867662,0.00072522036,0.00046154208,0.00839844],"genre_scores_gemma":[0.16537529,0.590334,0.008631729,0.18712097,0.023822803,0.00014764564,0.0011355692,0.00023631219,0.02319569],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988445,0.0002784691,0.00013676118,0.00023491621,0.00026286094,0.00024234065],"domain_scores_gemma":[0.99815446,0.0004918866,0.00020243808,0.0001267983,0.0004499628,0.0005743615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026749286,0.0007616694,0.0012660379,0.001036726,0.0010265382,0.0027360092,0.0009437963,0.0052335565,0.008616851],"category_scores_gemma":[0.0032442915,0.00043953385,0.00075233664,0.00081429293,0.0036781614,0.006013321,0.0023496053,0.009742459,0.003886359],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002690525,0.00023560158,0.010300901,0.0032034111,0.000203482,0.0018826594,0.0008642878,0.00047346417,0.0215877,0.05491002,0.2755132,0.62813467],"study_design_scores_gemma":[0.00023132953,0.0012196355,0.015007577,0.0036051911,0.00021156769,0.0070280354,0.002934006,0.0011262828,0.005121997,0.10121612,0.86206263,0.00023566993],"about_ca_topic_score_codex":0.001038172,"about_ca_topic_score_gemma":0.0011563534,"teacher_disagreement_score":0.008616851,"about_ca_system_score_codex":0.0013998402,"about_ca_system_score_gemma":0.001903898,"threshold_uncertainty_score":0.028826296},"labels":[],"label_agreement":null},{"id":"W3155082009","doi":"10.1139/cjpp-2020-0646","title":"Overexpression of miR-365a-3p relieves sepsis-induced acute myocardial injury by targeting MyD88/NF-κB pathway","year":2021,"lang":"en","type":"article","venue":"Canadian Journal of Physiology and Pharmacology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Sepsis; Tumor necrosis factor alpha; Apoptosis; Lipopolysaccharide; Inflammation; Flow cytometry; NF-κB; Western blot; Cancer research; Proinflammatory cytokine; NFKB1; Medicine; In vivo; Interleukin; Immunology; Cytokine; Chemistry; Biology; Transcription factor; Gene; Biochemistry","score_opus":0.008943205780315239,"score_gpt":0.24184215728056152,"score_spread":0.23289895150024628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155082009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9711149,0.010882884,0.011404637,0.0007151839,0.00034490295,0.00019569519,0.0012104964,0.00065655756,0.0034747832],"genre_scores_gemma":[0.9834204,0.0040325127,0.00858226,0.00039767526,0.000052232885,0.00021410764,0.0010846821,0.00009478868,0.0021213614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99974626,0.00003489987,0.000038708415,0.000047917496,0.00007530411,0.000056919067],"domain_scores_gemma":[0.9998759,0.000015348793,0.000044965363,0.000011067219,0.000018862222,0.000033852095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027500498,0.000621662,0.00073945563,0.00034158246,0.00029505923,0.0004648609,0.00030084714,0.00046658356,0.001300862],"category_scores_gemma":[0.00022822298,0.00028593992,0.0007017757,0.00020218824,0.0004171189,0.00030368424,0.00035145655,0.0013903301,0.0005733654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000963183,0.00016223923,0.00035510177,0.00028347262,0.000037509442,0.00016476994,0.00005652872,0.00019318199,0.9921556,0.00022459823,0.0002768764,0.005126989],"study_design_scores_gemma":[0.00026746222,0.0019179038,0.0048197154,0.00004631743,0.00018345595,0.0010080046,0.00013028145,0.0024547726,0.975967,0.00030461885,0.012875148,0.000025295189],"about_ca_topic_score_codex":0.0003340836,"about_ca_topic_score_gemma":0.00049293705,"teacher_disagreement_score":0.001300862,"about_ca_system_score_codex":0.00026221483,"about_ca_system_score_gemma":0.00048055872,"threshold_uncertainty_score":0.0043518543},"labels":[],"label_agreement":null},{"id":"W3169875547","doi":"10.1038/s41467-021-27215-6","title":"Risk-stratification of febrile African children at risk of sepsis using sTREM-1 as basis for a rapid triage test","year":2021,"lang":"en","type":"article","venue":"Nature Communications","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network; Western University; St. Michael's Hospital; University of Alberta","funders":"Canadian Institutes of Health Research; Bill and Melinda Gates Foundation","keywords":"Triage; Medicine; Sepsis; Incidence (geometry); Cohort; Risk stratification; Prospective cohort study; Receiver operating characteristic; Internal medicine; Pediatrics; Immunology; Emergency medicine","score_opus":0.02241469477110039,"score_gpt":0.2775565304318472,"score_spread":0.2551418356607468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3169875547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99674976,0.000539722,0.0017862378,0.00019149393,0.000026121092,0.000036938098,0.00020250012,0.000021591382,0.00044569324],"genre_scores_gemma":[0.9969326,0.00018135009,0.002568138,0.000033918303,0.000010677928,0.000018157132,0.00016259681,0.0000030957349,0.00008933803],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990289,0.00054715824,0.00007784006,0.00011060518,0.00012261784,0.000112722366],"domain_scores_gemma":[0.99835795,0.0006241783,0.0005896901,0.00012801171,0.00018162632,0.000118532706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020456228,0.00059567357,0.0005453946,0.001032112,0.00025559036,0.00067862624,0.00037855416,0.0004092726,0.00073292584],"category_scores_gemma":[0.007814931,0.00029818155,0.00051838794,0.00066146825,0.00023401307,0.0004207649,0.0005819671,0.0008119719,0.0002197425],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035276738,0.000025662219,0.9908064,0.000021569276,0.0000446155,0.00012639858,0.00010482159,0.0006055305,0.0007025038,0.000065790635,0.00018640762,0.0069576334],"study_design_scores_gemma":[0.00006746939,0.00082454016,0.9674616,0.00018118152,0.00017316116,0.0014471766,0.00060052366,0.025139904,0.0026314561,0.00042095844,0.0010219312,0.000030140582],"about_ca_topic_score_codex":0.0021924253,"about_ca_topic_score_gemma":0.0022600591,"teacher_disagreement_score":0.0021924253,"about_ca_system_score_codex":0.0003168955,"about_ca_system_score_gemma":0.0004855412,"threshold_uncertainty_score":0.010818362},"labels":[],"label_agreement":null},{"id":"W3171932756","doi":"10.1155/2021/2327721","title":"LR12 Promotes Liver Repair by Improving the Resolution of Inflammation and Liver Regeneration in Mice with Thioacetamide‐ (TAA‐) Induced Acute Liver Failure","year":2021,"lang":"en","type":"article","venue":"Mediators of Inflammation","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Science Foundation of Hebei Province; National Natural Science Foundation of China","keywords":"Thioacetamide; Liver regeneration; Inflammation; Chemokine; Hepatocyte; CCL20; CCR2; p38 mitogen-activated protein kinases; Liver injury; Chemistry; MAPK/ERK pathway; Pharmacology; Cancer research; Regeneration (biology); Immunology; Cell biology; Signal transduction; In vitro; Chemokine receptor; Biology; Biochemistry","score_opus":0.006599607727907628,"score_gpt":0.18758944898375426,"score_spread":0.18098984125584663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3171932756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9927194,0.002842892,0.0020977259,0.00037248898,0.00009981731,0.00012143196,0.0004931871,0.0003463837,0.00090672896],"genre_scores_gemma":[0.98734283,0.0021687208,0.0043166894,0.00022750336,0.00007227025,0.00034544317,0.00078757573,0.000049993352,0.0046889894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997693,0.00004688201,0.00003304487,0.00003950814,0.000040492985,0.00007079843],"domain_scores_gemma":[0.99975544,0.000010906477,0.0000871219,0.000022067985,0.000020673973,0.00010386514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034894093,0.00109754,0.0007472987,0.00079968234,0.00025715522,0.00025801847,0.00028908672,0.000550392,0.0018023734],"category_scores_gemma":[0.00015558946,0.00028761922,0.0006124031,0.0002202035,0.00044234178,0.00039164207,0.0002352733,0.001131406,0.00053625624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032298795,0.0010364729,0.000480359,0.00020265447,0.000025745074,0.00016237702,0.00004613917,0.000113598006,0.9904021,0.0001240444,0.00016203361,0.0040145414],"study_design_scores_gemma":[0.0011652206,0.023348918,0.014402916,0.00005463144,0.00021448045,0.0012054963,0.00012440684,0.0022504535,0.9512469,0.00023223223,0.0057172156,0.000037182606],"about_ca_topic_score_codex":0.00033860622,"about_ca_topic_score_gemma":0.00049049465,"teacher_disagreement_score":0.0018023734,"about_ca_system_score_codex":0.00021987727,"about_ca_system_score_gemma":0.00029913028,"threshold_uncertainty_score":0.006029606},"labels":[],"label_agreement":null},{"id":"W3173353617","doi":"10.29169/1927-5951.2021.11.06","title":"Gadolinium Orthovanadate GdVO4:Eu3+ Nanoparticles Ameliorate Carrageenan-Induced Intestinal Inflammation","year":2021,"lang":"en","type":"article","venue":"Journal of Pharmacy and Nutrition Sciences","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Inflammation; Carrageenan; Lamina propria; Apoptosis; Chemistry; Immune system; Pharmacology; Pathology; Medicine; Internal medicine; Immunology; Biochemistry","score_opus":0.05193837451129559,"score_gpt":0.31421592471207005,"score_spread":0.2622775502007745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3173353617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9923908,0.0029174783,0.00320699,0.00013832774,0.00006553111,0.000047398404,0.00007142341,0.00013875979,0.001023257],"genre_scores_gemma":[0.9921468,0.0019116232,0.0026201103,0.00007270145,0.00001877697,0.000041183986,0.000115106384,0.000018416582,0.0030553667],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999879,0.000017120534,0.000012301904,0.000019643243,0.000034086646,0.00003783858],"domain_scores_gemma":[0.999931,0.0000075046605,0.000027611144,0.000004865794,0.000010412405,0.000018573752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011511622,0.000468596,0.00041228998,0.00030056076,0.00009454814,0.00015544532,0.00015190218,0.00041127173,0.0006811146],"category_scores_gemma":[0.00009501089,0.00014455453,0.00028571862,0.00008634109,0.00024881464,0.00027724824,0.0001842933,0.00043297434,0.0001238183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030045165,0.00006645458,0.000070369984,0.000082242375,0.000006224582,0.000053292653,0.000011977835,0.00006408109,0.99737525,0.000029598503,0.000021139906,0.0019189636],"study_design_scores_gemma":[0.00004947418,0.0017014521,0.0014602346,0.000012094778,0.00003088324,0.00017931411,0.000031497464,0.00050938287,0.99464524,0.000051512754,0.0013244605,0.0000046236346],"about_ca_topic_score_codex":0.00039227318,"about_ca_topic_score_gemma":0.00060263695,"teacher_disagreement_score":0.0006811146,"about_ca_system_score_codex":0.00013561179,"about_ca_system_score_gemma":0.00016229802,"threshold_uncertainty_score":0.0022785068},"labels":[],"label_agreement":null},{"id":"W4224231988","doi":"10.3324/haematol.2021.280404","title":"Persistent DNA damage and oncogenic stress-induced Trem1 promotes leukemia in mice","year":2022,"lang":"en","type":"article","venue":"Haematologica","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Cincinnati Children's Hospital Medical Center; National Institutes of Health; Université Laval; National Heart, Lung, and Blood Institute; University of Pittsburgh","keywords":"FANCA; Myelodysplastic syndromes; Fanconi anemia; Haematopoiesis; Biology; Stem cell; Myeloid leukemia; Cancer research; Leukemia; Immunology; DNA repair; Gene; Cell biology; Bone marrow; Genetics","score_opus":0.022674068464629635,"score_gpt":0.2224568965446786,"score_spread":0.19978282808004896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4224231988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98965466,0.0014373532,0.0033404904,0.00036908442,0.000052997144,0.00011858515,0.0015177154,0.00046113998,0.0030479215],"genre_scores_gemma":[0.9857298,0.0012874539,0.0032189833,0.00022124941,0.00002974967,0.00020021356,0.0011125931,0.0000841669,0.008115806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996681,0.000060915416,0.000030335534,0.000093405455,0.000055515553,0.00009169952],"domain_scores_gemma":[0.99971133,0.000019749037,0.00011895221,0.00002531733,0.000010969594,0.00011365338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002955249,0.0006868165,0.00034053435,0.0011820102,0.0003525204,0.00044977485,0.00036220005,0.0008000729,0.0037808318],"category_scores_gemma":[0.00013602934,0.0003861928,0.00042207577,0.0002750438,0.00053018803,0.0004719768,0.0005317448,0.0014222519,0.0009975852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000862175,0.00040914875,0.0006557724,0.0000744684,0.0000128176225,0.0002988134,0.00006607981,0.00013105983,0.992961,0.0008686247,0.0002059131,0.0034541243],"study_design_scores_gemma":[0.0005161499,0.0051585785,0.021713985,0.00010300036,0.0000895289,0.003850157,0.00018938452,0.0048653325,0.94402796,0.0011011545,0.018345406,0.000039266106],"about_ca_topic_score_codex":0.00029003914,"about_ca_topic_score_gemma":0.00055551704,"teacher_disagreement_score":0.0037808318,"about_ca_system_score_codex":0.0005170006,"about_ca_system_score_gemma":0.00029493464,"threshold_uncertainty_score":0.012648165},"labels":[],"label_agreement":null},{"id":"W4229375725","doi":"10.1007/s00109-022-02201-7","title":"TREM-2 mediates dendritic cell–induced NO to suppress Th17 activation and ameliorate chronic kidney diseases","year":2022,"lang":"en","type":"article","venue":"Journal of Molecular Medicine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre","funders":"Ministry of Science and Technology, Taiwan","keywords":"Myeloid; Kidney; Kidney disease; Cancer research; Medicine; Immunology; Chemistry; Cell biology; Biology; Internal medicine","score_opus":0.00801165410213322,"score_gpt":0.2264505492966926,"score_spread":0.21843889519455936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229375725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99002576,0.0026019327,0.0032270085,0.0005164782,0.00039312599,0.00014101178,0.00040454644,0.00015795883,0.0025320856],"genre_scores_gemma":[0.9927008,0.0011601149,0.0021635017,0.00022752787,0.00013442515,0.00012261093,0.00035268263,0.000019746265,0.0031185725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996513,0.000093807204,0.000034672776,0.000041691215,0.00006468109,0.00011375359],"domain_scores_gemma":[0.9998041,0.000011107384,0.00004916598,0.00002115274,0.000022330394,0.000092212504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005930583,0.0005356713,0.0006009054,0.00026472655,0.00025995783,0.00041685355,0.0003644441,0.0004801121,0.0022635725],"category_scores_gemma":[0.0002700707,0.00021242505,0.0006071453,0.00009169777,0.00042470644,0.0003957962,0.00039545374,0.001984805,0.0007505893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0060589337,0.0012656403,0.0010954472,0.0004351002,0.000081199905,0.0004168857,0.00004919554,0.00030269165,0.9805711,0.0006741869,0.0007262754,0.008323363],"study_design_scores_gemma":[0.0025446021,0.009796917,0.022123398,0.000088519286,0.00042746167,0.0014944386,0.00030074106,0.005016945,0.9426813,0.00093079754,0.01454868,0.00004613192],"about_ca_topic_score_codex":0.00018578576,"about_ca_topic_score_gemma":0.00046657736,"teacher_disagreement_score":0.0022635725,"about_ca_system_score_codex":0.00018309333,"about_ca_system_score_gemma":0.00063141977,"threshold_uncertainty_score":0.0075724125},"labels":[],"label_agreement":null},{"id":"W4229454441","doi":"10.3389/fnagi.2022.843828","title":"Serum sTREM2: A Potential Biomarker for Mild Cognitive Impairment in Patients With Obstructive Sleep Apnea","year":2022,"lang":"en","type":"article","venue":"Frontiers in Aging Neuroscience","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Natural Science Foundation of Liaoning Province","keywords":"Obstructive sleep apnea; Biomarker; Medicine; Cognitive impairment; Sleep apnea; Sleep (system call); Cognition; Internal medicine; Polysomnography; Apnea; Cardiology; Audiology; Psychiatry; Computer science; Biology","score_opus":0.008830898703999616,"score_gpt":0.20924261639294967,"score_spread":0.20041171768895005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229454441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988439,0.000575321,0.00013319828,0.000035290865,0.000007525024,0.000008058664,0.00013822284,0.000004399378,0.00025408744],"genre_scores_gemma":[0.99936444,0.000113510185,0.00020233005,0.000022587301,0.000016211965,0.0000065537374,0.00013415136,5.2878437e-7,0.0001397782],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998313,0.000040307743,0.000028420605,0.000027511356,0.00004354629,0.000028922615],"domain_scores_gemma":[0.99945766,0.00009410405,0.00027053044,0.000017939785,0.00007836158,0.00008137147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004097637,0.00040862858,0.00029094008,0.0006970177,0.00022852083,0.0003448928,0.0001786167,0.0004089912,0.0009037141],"category_scores_gemma":[0.0011931288,0.000119923934,0.00036352317,0.00049588725,0.00012814277,0.00021997918,0.00028325777,0.00033009294,0.00014036482],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029001883,0.000057820576,0.9956593,0.000022428376,0.00006359141,0.00012376864,0.000031192245,0.000059779068,0.0016933089,0.000010955765,0.000059400638,0.0019283657],"study_design_scores_gemma":[0.000009393134,0.00022497473,0.9982634,0.000008397938,0.000036929083,0.00038933405,0.000055365686,0.00056237896,0.0003132232,0.000028432487,0.00010459055,0.0000036347728],"about_ca_topic_score_codex":0.0008187508,"about_ca_topic_score_gemma":0.0013868125,"teacher_disagreement_score":0.0009037141,"about_ca_system_score_codex":0.000120678866,"about_ca_system_score_gemma":0.00012807497,"threshold_uncertainty_score":0.0030232668},"labels":[],"label_agreement":null},{"id":"W4233441564","doi":"10.1164/rccm.201502-0355oc","title":"A Molecular Biomarker to Diagnose Community-acquired Pneumonia on Intensive Care Unit Admission","year":2015,"lang":"en","type":"article","venue":"American Journal of Respiratory and Critical Care Medicine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":256,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Mars","keywords":"Medicine; Procalcitonin; Community-acquired pneumonia; Intensive care unit; Internal medicine; Biomarker; Pneumonia; Cohort; Sepsis; Confidence interval; Cohort study","score_opus":0.04730000868489539,"score_gpt":0.33221112973817474,"score_spread":0.28491112105327937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233441564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99394786,0.0013763014,0.00219852,0.00027753218,0.000049305723,0.000100513185,0.0007383406,0.000064420834,0.0012472182],"genre_scores_gemma":[0.99559855,0.00024165427,0.003228838,0.00012284928,0.00005146353,0.000051755396,0.0005403095,0.0000035324301,0.00016091566],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9995852,0.000106609434,0.000052322262,0.00008991569,0.000112969,0.000052936193],"domain_scores_gemma":[0.99859947,0.0003367455,0.00061038404,0.00004888013,0.00023711541,0.00016745222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073405856,0.00056892395,0.00049751997,0.0011694211,0.00017208896,0.0005965906,0.00034031997,0.00056625414,0.00090470235],"category_scores_gemma":[0.0025722159,0.00009125778,0.00023648347,0.00066726364,0.0002959492,0.00029259437,0.00038469143,0.00053868396,0.0003360491],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011623754,0.00020082868,0.9471227,0.00012850546,0.00009010655,0.00029333396,0.000066850924,0.00078196655,0.023935992,0.00008353505,0.00071325165,0.025420576],"study_design_scores_gemma":[0.0000558573,0.0016470655,0.97258985,0.00009096225,0.00010008872,0.0018079301,0.00023011462,0.007717981,0.014106631,0.00034680127,0.001281881,0.000024815312],"about_ca_topic_score_codex":0.00033680908,"about_ca_topic_score_gemma":0.00038505005,"teacher_disagreement_score":0.0011694211,"about_ca_system_score_codex":0.00028704366,"about_ca_system_score_gemma":0.00033825552,"threshold_uncertainty_score":0.0038821101},"labels":[],"label_agreement":null},{"id":"W4235920885","doi":"10.21203/rs.3.rs-65068/v1","title":"Risk-stratification of febrile African children at risk of sepsis using sTREM-1 as basis for a rapid triage test","year":2020,"lang":"en","type":"preprint","venue":"Research Square (Research Square)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Toronto","funders":"Canadian Institutes of Health Research; Bill and Melinda Gates Foundation","keywords":"Triage; Risk stratification; Test (biology); Sepsis; Medicine; Stratification (seeds); Intensive care medicine; Medical emergency; Internal medicine; Biology","score_opus":0.11086044926594785,"score_gpt":0.38505799752641007,"score_spread":0.2741975482604622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235920885","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9969394,0.00061423366,0.0012916218,0.00021609243,0.00003811142,0.00004082536,0.00028149973,0.000023923256,0.0005542427],"genre_scores_gemma":[0.9980938,0.00014040504,0.001477078,0.00003997912,0.000011301434,0.000018030401,0.00013732193,0.0000023322339,0.00007982883],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991678,0.00046781322,0.00007135528,0.00008778155,0.0001021931,0.0001030574],"domain_scores_gemma":[0.9981609,0.000584114,0.0007662201,0.000112347654,0.00022082865,0.00015558528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016893438,0.0005324822,0.00039653984,0.0008897726,0.00024360162,0.00056044845,0.0003248447,0.00036874006,0.0011452155],"category_scores_gemma":[0.0070134657,0.00024612865,0.0003944032,0.00054909434,0.00021797609,0.0003540841,0.00057722785,0.0007816495,0.00022872117],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020123557,0.000021026635,0.9937271,0.000020395892,0.000027925722,0.000116668976,0.000066875305,0.00024040086,0.0005024057,0.000038466886,0.00024223737,0.0047951224],"study_design_scores_gemma":[0.00004169065,0.0005398913,0.98507416,0.00016096902,0.000084639425,0.0012283839,0.00045177975,0.009364416,0.0019506176,0.00022516484,0.0008609566,0.000017306822],"about_ca_topic_score_codex":0.0023406814,"about_ca_topic_score_gemma":0.0020046083,"teacher_disagreement_score":0.0023406814,"about_ca_system_score_codex":0.00029303768,"about_ca_system_score_gemma":0.0004908085,"threshold_uncertainty_score":0.0089342},"labels":[],"label_agreement":null},{"id":"W4243142249","doi":"10.3410/f.1120707.793503060","title":"Faculty Opinions recommendation of A critical function for CD200 in lung immune homeostasis and the severity of influenza infection.","year":2015,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Lung function; Function (biology); Immune system; Homeostasis; Immunology; Lung; Medicine; Biology; Internal medicine; Evolutionary biology","score_opus":0.03256037094329398,"score_gpt":0.3469404472028908,"score_spread":0.3143800762595968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243142249","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":"evaluation","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":"evaluation","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00059302343,0.00038838165,0.00015035026,0.0004472354,0.000110929854,0.000021290794,0.99637955,0.00031994126,0.0015893249],"genre_scores_gemma":[0.0030775114,0.00030377065,0.00053442165,0.00042022613,0.000055238183,0.00006248141,0.99308115,0.00008405509,0.0023812107],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.998987,0.00015359378,0.00011448788,0.00033009524,0.00026825193,0.00014648096],"domain_scores_gemma":[0.9971535,0.00084583816,0.0004142969,0.00048474778,0.00070045155,0.0004010603],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0013475111,0.001413688,0.0013524217,0.0016933002,0.00060624524,0.0026150157,0.0019631884,0.0024115636,0.06409658],"category_scores_gemma":[0.011490668,0.00044282086,0.0018170021,0.0020490238,0.00026459154,0.0012133671,0.001360558,0.0014449181,0.041468773],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023543542,0.000025732297,0.0058541233,0.0010628528,0.000129568,0.00003626601,0.000012193368,0.00020221421,0.00023485799,0.00032811557,0.9867286,0.0051500807],"study_design_scores_gemma":[0.0008128958,0.000062039,0.032092437,0.0010413594,0.00040624198,0.00027148245,0.000049205955,0.0016378063,0.0010156092,0.0023533825,0.9602021,0.000055412824],"about_ca_topic_score_codex":0.020361071,"about_ca_topic_score_gemma":0.049644098,"teacher_disagreement_score":0.9986525,"about_ca_system_score_codex":0.0011034511,"about_ca_system_score_gemma":0.0028359406,"threshold_uncertainty_score":0.21442437},"labels":[],"label_agreement":null},{"id":"W4253914883","doi":"10.1007/978-3-319-99375-1_23","title":"Signal Transduction Changes in Human Neutrophils with Age","year":2019,"lang":"en","type":"book-chapter","venue":"","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Innate immune system; Receptor; Immune system; Immunology; Signal transduction; Biology; Cytokine; Myeloid cells; Myeloid; Acquired immune system; Cell biology","score_opus":0.017633085275886622,"score_gpt":0.20398355444579258,"score_spread":0.18635046916990597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253914883","genre_codex":"review","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32939875,0.48249283,0.041541226,0.005964312,0.0035378519,0.00024506229,0.003145597,0.0004234797,0.13325094],"genre_scores_gemma":[0.36185372,0.2138361,0.020588916,0.0033364173,0.0012699871,0.00028479623,0.0021509577,0.00008426329,0.39659485],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999527,0.000007895168,0.0000031834022,0.000011331912,0.000016731932,0.00000817137],"domain_scores_gemma":[0.9999832,0.000007763046,0.0000023144773,0.0000014864377,0.000003441166,0.0000018493195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001249286,0.00023450468,0.00020923412,0.00016361159,0.000085371,0.00030783608,0.00021883528,0.0003383013,0.0037780919],"category_scores_gemma":[0.00007057537,0.00009687612,0.00019038482,0.0002197138,0.00010864922,0.00038470497,0.00019256854,0.0004974088,0.0010580164],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006619095,0.00017816438,0.0014313554,0.00070783694,0.000027155775,0.0013015264,0.00033111245,0.0004719709,0.7325435,0.010894518,0.012385329,0.2390656],"study_design_scores_gemma":[0.00005944495,0.0017998896,0.059527595,0.00035048297,0.00012344657,0.007730638,0.00051748304,0.0022250207,0.4579855,0.024208063,0.44539756,0.00007484949],"about_ca_topic_score_codex":0.00025412077,"about_ca_topic_score_gemma":0.0005007395,"teacher_disagreement_score":0.0037780919,"about_ca_system_score_codex":0.00018161403,"about_ca_system_score_gemma":0.00009351955,"threshold_uncertainty_score":0.012638986},"labels":[],"label_agreement":null},{"id":"W4254409278","doi":"10.3410/f.718433745.793532304","title":"Faculty Opinions recommendation of BMP signaling balances murine myeloid potential through SMAD-independent p38MAPK and NOTCH pathways.","year":2017,"lang":"en","type":"dataset","venue":"Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"SMAD; Notch signaling pathway; Signal transduction; Cell biology; Chemistry; Cancer research; Biology","score_opus":0.031242800153439967,"score_gpt":0.32138985514574914,"score_spread":0.2901470549923092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254409278","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007039117,0.00031048193,0.000110028646,0.00017687102,0.000053752705,0.000019157547,0.99747807,0.00031657214,0.00083119393],"genre_scores_gemma":[0.001754882,0.00018480116,0.00036086788,0.00012129269,0.000017429316,0.00006736208,0.996442,0.000056377565,0.0009948736],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988801,0.00021207561,0.00012499545,0.00036077033,0.00027127392,0.00015081989],"domain_scores_gemma":[0.9979982,0.0006316529,0.00029985447,0.00039038374,0.00043464525,0.0002453945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014633149,0.002030841,0.0014858108,0.0019107213,0.0005662258,0.0022137507,0.0022568388,0.00230229,0.034231577],"category_scores_gemma":[0.0065606344,0.00050647854,0.0020542429,0.0025808772,0.0003555703,0.0009917524,0.0013714489,0.0015139312,0.037375066],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005503343,0.00008043398,0.00636991,0.0019770171,0.00025923707,0.00005429921,0.000021351254,0.00071871094,0.0005500698,0.0004096752,0.98174584,0.007263173],"study_design_scores_gemma":[0.0014748132,0.00010241309,0.020894492,0.0010689911,0.0004856158,0.00021615323,0.000100420075,0.0022148215,0.0022113349,0.0019871728,0.9691693,0.00007444943],"about_ca_topic_score_codex":0.017413415,"about_ca_topic_score_gemma":0.04382669,"teacher_disagreement_score":0.034231577,"about_ca_system_score_codex":0.0013368038,"about_ca_system_score_gemma":0.0028950805,"threshold_uncertainty_score":0.11451602},"labels":[],"label_agreement":null},{"id":"W4285085701","doi":"10.1371/journal.pmed.1004057","title":"Immune and endothelial activation markers and risk stratification of childhood pneumonia in Uganda: A secondary analysis of a prospective cohort study","year":2022,"lang":"en","type":"article","venue":"PLoS Medicine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Public Health Ontario; University Health Network; Toronto General Hospital; University of Toronto; Western University","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Pneumonia; Procalcitonin; Prospective cohort study; Internal medicine; Endothelial activation; Immunology; Cohort study; Immune dysregulation; Sepsis; Disease; Inflammation","score_opus":0.006085300007172281,"score_gpt":0.20923832283422703,"score_spread":0.20315302282705475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285085701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985374,0.00023050253,0.0001356214,0.000012836857,0.000008088062,0.00006833287,0.0008718858,0.0000025256545,0.00013266825],"genre_scores_gemma":[0.9980818,0.00014823047,0.0003056962,0.000024621835,0.000011228407,0.00015088025,0.001144607,0.000003551729,0.00012939512],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99818736,0.0007591733,0.00020158531,0.00035929805,0.00020920436,0.00028334625],"domain_scores_gemma":[0.9967573,0.00043779585,0.0011729844,0.00070116913,0.0005693755,0.00036130255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023328809,0.0007741909,0.0009201387,0.0015321932,0.00082583184,0.00095576415,0.0006685969,0.0005432014,0.0010602959],"category_scores_gemma":[0.004383606,0.0008486588,0.0016730506,0.0019538724,0.00038523218,0.0004127674,0.0013694233,0.00089338556,0.00028480237],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030933358,0.000054357264,0.998417,0.000028325945,0.00022222192,0.00007966976,0.00009597277,0.000033753575,0.00011242129,0.000010476153,0.000101885475,0.00053458766],"study_design_scores_gemma":[0.000054705626,0.00034606835,0.9984042,0.000024459803,0.00015745254,0.000255182,0.00022308285,0.0001904638,0.000059826107,0.000011401799,0.00026660642,0.000006575392],"about_ca_topic_score_codex":0.00842147,"about_ca_topic_score_gemma":0.007468377,"teacher_disagreement_score":0.00842147,"about_ca_system_score_codex":0.000491053,"about_ca_system_score_gemma":0.00090461184,"threshold_uncertainty_score":0.016744912},"labels":[],"label_agreement":null},{"id":"W4289837534","doi":"10.1128/mbio.01456-22","title":"TREM2 Promotes Immune Evasion by Mycobacterium tuberculosis in Human Macrophages","year":2022,"lang":"en","type":"article","venue":"mBio","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Ottawa","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Government of Canada","keywords":"TREM2; Macrophage; Immune system; Mycobacterium tuberculosis; Microbiology; Biology; Tumor necrosis factor alpha; Intracellular parasite; Interferon; Interferon gamma; Immunology; Tuberculosis; Medicine; Biochemistry","score_opus":0.008064053803715535,"score_gpt":0.2151743516013237,"score_spread":0.20711029779760817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4289837534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9896863,0.00527508,0.0006739037,0.0004830052,0.00015591568,0.000052111925,0.0003256719,0.000068770816,0.0032792694],"genre_scores_gemma":[0.9944312,0.0015004653,0.00037647533,0.00027908394,0.00008289264,0.0000504155,0.00034540187,0.000009555304,0.002924651],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997482,0.0000876926,0.000013168833,0.000022464175,0.00004308733,0.00008541093],"domain_scores_gemma":[0.9999074,0.0000126465275,0.000015280993,0.000011070532,0.000014761731,0.000038910497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004819448,0.0002571758,0.0002822089,0.00023980251,0.00022548084,0.0004396627,0.00012833084,0.00035471184,0.0039891624],"category_scores_gemma":[0.0002151526,0.00015336763,0.00026170383,0.000103024286,0.00020488338,0.00017917398,0.00042354286,0.0007988316,0.0011000219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033441372,0.0005046439,0.0028724296,0.00042347595,0.000041481475,0.00091343967,0.00014931528,0.00024642076,0.9806188,0.0005551345,0.0017979998,0.00853272],"study_design_scores_gemma":[0.0015506533,0.007745163,0.13148993,0.0002470041,0.00020874527,0.0075285574,0.0011599124,0.004133108,0.7974057,0.0012511078,0.047223885,0.000056176337],"about_ca_topic_score_codex":0.00017598605,"about_ca_topic_score_gemma":0.00031962048,"teacher_disagreement_score":0.0039891624,"about_ca_system_score_codex":0.00013725802,"about_ca_system_score_gemma":0.00027014336,"threshold_uncertainty_score":0.013345063},"labels":[],"label_agreement":null},{"id":"W4292865496","doi":"10.3389/fphys.2022.965611","title":"Endothelitis profile in acute heart failure and cardiogenic shock patients: Endocan as a potential novel biomarker and putative therapeutic target","year":2022,"lang":"en","type":"article","venue":"Frontiers in Physiology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Regional Development Fund; Centre hospitalier universitaire Sainte-Justine; Fundação para a Ciência e a Tecnologia; Ministerio de Economía y Competitividad","keywords":"Medicine; Heart failure; Endothelial activation; Internal medicine; Ejection fraction; Natriuretic peptide; Cardiogenic shock; Creatinine; Endothelial dysfunction; Biomarker; Inflammation; Gastroenterology; Troponin T; Shock (circulatory); Cardiology; Septic shock; Systemic inflammation; Sepsis; Myocardial infarction; Chemistry","score_opus":0.004937588079486238,"score_gpt":0.2014388968151208,"score_spread":0.19650130873563457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4292865496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9729653,0.024050582,0.0009750992,0.0004789202,0.00007217566,0.0000483464,0.00021612168,0.000021924487,0.0011715612],"genre_scores_gemma":[0.99267596,0.005082507,0.0013900851,0.0001758534,0.00018844054,0.000035520057,0.0002041525,0.0000022534396,0.0002452916],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99989605,0.000031421376,0.000012045981,0.000019550693,0.000021212203,0.000019666297],"domain_scores_gemma":[0.99973446,0.0000483999,0.00009927615,0.000006712215,0.00004411242,0.00006707444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031080274,0.00033173975,0.0006035704,0.0005245284,0.00015147318,0.000528141,0.00017628416,0.00035239125,0.0005996033],"category_scores_gemma":[0.0005127674,0.00006128425,0.00019383113,0.0003915751,0.00015484086,0.00023715339,0.00022023353,0.0003884846,0.0000841166],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.009939337,0.0006462051,0.77551395,0.0007704123,0.0003872148,0.0037264407,0.00022433753,0.00084832165,0.059378374,0.00032088178,0.0011310966,0.14711338],"study_design_scores_gemma":[0.0002576505,0.003693476,0.9742106,0.00024156777,0.0005560953,0.004295793,0.0005291866,0.0050489493,0.0067904657,0.0005737576,0.003761653,0.000040843788],"about_ca_topic_score_codex":0.0003120542,"about_ca_topic_score_gemma":0.00044029873,"teacher_disagreement_score":0.0006035704,"about_ca_system_score_codex":0.00016008219,"about_ca_system_score_gemma":0.00023454202,"threshold_uncertainty_score":0.0020058155},"labels":[],"label_agreement":null},{"id":"W4303986734","doi":"10.1186/s12931-022-02198-0","title":"Comparative transcriptomics in human COPD reveals dysregulated genes uniquely expressed in ferrets","year":2022,"lang":"en","type":"article","venue":"Respiratory Research","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institutes of Health; Alpha-1 Foundation","keywords":"Transcriptome; Gene; Biology; COPD; Gene expression profiling; Gene expression; Computational biology; Genetics; Medicine; Internal medicine","score_opus":0.17598948948073231,"score_gpt":0.3836338711484556,"score_spread":0.20764438166772328,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4303986734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938981,0.0013316926,0.002360898,0.00006663189,0.000035626657,0.000032863034,0.0019101802,0.00004521241,0.0003188734],"genre_scores_gemma":[0.9916198,0.0007976491,0.0031892438,0.00013710333,0.000020937872,0.00012912956,0.0034556803,0.000033531775,0.00061678526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99975723,0.000018259474,0.000018058143,0.000115983574,0.000051577066,0.00003886223],"domain_scores_gemma":[0.9998754,0.0000349881,0.000038538037,0.000016396842,0.000017262106,0.000017343737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023183292,0.00031236914,0.00045860984,0.0008511786,0.0003294368,0.00030714396,0.00016318375,0.0003919235,0.00083352096],"category_scores_gemma":[0.0002861652,0.00010499215,0.000481666,0.00041980133,0.00040258883,0.000176763,0.00025246822,0.00030444548,0.0002534713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072859897,0.00003738422,0.0123871565,0.00014118913,0.000055231114,0.0004009783,0.000080858095,0.00018013555,0.98227626,0.0000739547,0.00014920723,0.003488955],"study_design_scores_gemma":[0.00006904451,0.0017455787,0.62010807,0.00007735871,0.00036770484,0.0074985926,0.0009142198,0.0033389207,0.35752523,0.0006826234,0.007622237,0.000050437695],"about_ca_topic_score_codex":0.00033994255,"about_ca_topic_score_gemma":0.00044636853,"teacher_disagreement_score":0.0008511786,"about_ca_system_score_codex":0.00023225971,"about_ca_system_score_gemma":0.00013172458,"threshold_uncertainty_score":0.002788365},"labels":[],"label_agreement":null},{"id":"W4304890722","doi":"10.1016/j.jinf.2022.10.010","title":"Performance of host-response biomarkers to risk-stratify children with pneumonia in Bhutan","year":2022,"lang":"en","type":"article","venue":"Journal of Infection","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Pneumonia; Referral; Intensive care medicine; Biomarker; Triage; Disease; Prioritization; Risk stratification; Pediatrics; Internal medicine; Emergency medicine","score_opus":0.00520744458463356,"score_gpt":0.20643849168269623,"score_spread":0.20123104709806267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304890722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9975896,0.0010332373,0.00026888255,0.00017713303,0.000025296386,0.000021272052,0.00024373659,0.0000075078087,0.00063330925],"genre_scores_gemma":[0.9985733,0.00033450322,0.00048229762,0.00008461576,0.000016006497,0.000016827411,0.00028064227,0.0000027522124,0.00020910948],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9991974,0.0002059092,0.00008969893,0.00011414532,0.0001346136,0.00025821113],"domain_scores_gemma":[0.9990274,0.00020370029,0.00027009565,0.000040902436,0.00021903051,0.0002388861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008532181,0.0005545341,0.0006437967,0.0009751056,0.00089360535,0.0011863727,0.0005923629,0.0006054106,0.00081275526],"category_scores_gemma":[0.0017346389,0.00032964037,0.00053278834,0.0010576285,0.00046452176,0.0006776746,0.0011438516,0.0011471552,0.00021767452],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017993117,0.00008280722,0.9937115,0.00004096667,0.000052523952,0.00018030376,0.00029667784,0.00007597905,0.000535962,0.00005830818,0.00012618468,0.004658904],"study_design_scores_gemma":[0.000024613188,0.0004485863,0.9935988,0.000116664814,0.00013465855,0.0006116616,0.0019628715,0.001361397,0.000705979,0.00024459534,0.00077006494,0.000020103647],"about_ca_topic_score_codex":0.0266904,"about_ca_topic_score_gemma":0.03576636,"teacher_disagreement_score":0.0266904,"about_ca_system_score_codex":0.0010833781,"about_ca_system_score_gemma":0.002111808,"threshold_uncertainty_score":0.05307007},"labels":[],"label_agreement":null},{"id":"W4308695772","doi":"10.1101/2022.11.09.515839","title":"TREM1 <sup>+</sup> regulatory myeloid cells expand in steatohepatitis-HCC and associate with poor prognosis and therapeutic resistance to immune checkpoint blockade","year":2022,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fondation ARC pour la Recherche sur le Cancer; Achievement Rewards for College Scientists Foundation","keywords":"Myeloid; Immune checkpoint; Cancer research; Immunotherapy; Population; Immunology; CD33; Biology; Medicine; Immune system; Stem cell; Cell biology","score_opus":0.008511055081767643,"score_gpt":0.1898192869622186,"score_spread":0.18130823188045095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308695772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99890685,0.00017282256,0.00044608393,0.0000145363265,0.0000015613662,0.000004877197,0.00013025476,0.000021752421,0.00030126996],"genre_scores_gemma":[0.99906176,0.000060648643,0.00029179332,0.000012454663,0.000005798157,0.000006173266,0.00025311825,0.000004300897,0.00030388244],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99995065,0.000009910032,0.0000052205964,0.000012133159,0.000009162852,0.000012859856],"domain_scores_gemma":[0.9998702,0.000016745398,0.000051256015,0.000014025182,0.000013022698,0.00003477674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017474116,0.00011178732,0.00014992557,0.00050662964,0.00012422797,0.00021666074,0.000089114066,0.00013712942,0.0017765437],"category_scores_gemma":[0.00014331425,0.00010690663,0.000109823355,0.00022297309,0.00012275638,0.00009639787,0.0001952198,0.00021530324,0.00034586334],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002796534,0.00009242808,0.48701727,0.00008711737,0.00005899611,0.0011890824,0.00018638972,0.00038634348,0.49022886,0.0003656913,0.00053972885,0.017051559],"study_design_scores_gemma":[0.000024292167,0.0003741671,0.96184576,0.000008087908,0.00003049371,0.0046874997,0.00016645643,0.002714343,0.028248237,0.00027919677,0.0016137388,0.000007714635],"about_ca_topic_score_codex":0.0001653717,"about_ca_topic_score_gemma":0.0001605207,"teacher_disagreement_score":0.0017765437,"about_ca_system_score_codex":0.000071370814,"about_ca_system_score_gemma":0.000055494696,"threshold_uncertainty_score":0.0059431195},"labels":[],"label_agreement":null},{"id":"W4312088112","doi":"10.1002/alz.061927","title":"sTREM2 affects cytokine expression profiles in THP‐1 cell model.","year":2022,"lang":"en","type":"article","venue":"Alzheimer s & Dementia","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Ottawa","funders":"","keywords":"THP1 cell line; Cytokine; Inflammation; Chemokine; Monoclonal antibody; Proinflammatory cytokine; Innate immune system; Macrophage; Tumor necrosis factor alpha; Cell biology; Immunology; Immune system; Antibody; Cell culture; Biology; In vitro; Biochemistry","score_opus":0.018031963766068568,"score_gpt":0.2249112715839714,"score_spread":0.2068793078179028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312088112","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9816506,0.0050785514,0.0040187906,0.0005636286,0.00040481437,0.0001250035,0.004270148,0.00019354459,0.0036949222],"genre_scores_gemma":[0.9742768,0.0027517278,0.008545534,0.0005098014,0.00012363648,0.0003847676,0.0045790155,0.000038763246,0.00878981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977535,0.000046765304,0.00002479332,0.000039440394,0.000056284087,0.000057373723],"domain_scores_gemma":[0.99988794,0.00001753356,0.000024941566,0.000012415692,0.000025792533,0.000031438118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023921404,0.00042898452,0.0003915596,0.00025915922,0.00016423101,0.00024389189,0.00014114812,0.000427893,0.0020204238],"category_scores_gemma":[0.0001419929,0.00015059096,0.00035991843,0.00022820948,0.0001890729,0.00018916234,0.0001369261,0.0008481434,0.00070528424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005731928,0.00010600336,0.00022162129,0.00014530896,0.0000076227334,0.00013654708,0.00003179406,0.000080673715,0.9973226,0.00004328196,0.00027951293,0.0010518796],"study_design_scores_gemma":[0.00007531965,0.0016676891,0.007081155,0.000022538346,0.00003474758,0.00056091574,0.0001485236,0.001195511,0.9835845,0.000086873304,0.0055291834,0.000013125957],"about_ca_topic_score_codex":0.00030545052,"about_ca_topic_score_gemma":0.00058947,"teacher_disagreement_score":0.0020204238,"about_ca_system_score_codex":0.00013870397,"about_ca_system_score_gemma":0.00016002008,"threshold_uncertainty_score":0.006758988},"labels":[],"label_agreement":null},{"id":"W4313385041","doi":"10.4049/jimmunol.198.supp.208.4","title":"Leukotriene (LT) B4 metabolites inhibit the LTB4-mediated responses of human neutrophils.","year":2017,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Moncton; Centre de Développement du Porc du Québec; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Leukotriene B4; Phagocyte; Leukotriene; Receptor; Chemotaxis; Degranulation; Chemistry; Biochemistry; Pharmacology; Biology; Inflammation; Phagocytosis; Cell biology; Immunology","score_opus":0.022634196520069975,"score_gpt":0.2586731809121383,"score_spread":0.23603898439206833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313385041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98483765,0.0097233355,0.0024600518,0.0002176082,0.000095523654,0.00015616944,0.00038537782,0.00007686331,0.0020474258],"genre_scores_gemma":[0.9926421,0.002048706,0.0010648499,0.00010484108,0.00004230117,0.00008566277,0.0007190547,0.000008442502,0.003284153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996625,0.00015248686,0.00003684289,0.000023050961,0.00004741746,0.00007765824],"domain_scores_gemma":[0.99988735,0.000033127348,0.000021642498,0.000015453175,0.00001731621,0.000025042895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003929287,0.0005337699,0.00031374893,0.00020867884,0.00015497261,0.00022338079,0.00025731194,0.00032800902,0.0042344998],"category_scores_gemma":[0.00034388257,0.00015471512,0.0003692547,0.00011643948,0.0001614919,0.00015695932,0.00026820577,0.00036672325,0.0011501017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0031058677,0.00038022033,0.00070156436,0.00020450926,0.000035014746,0.00019281634,0.00003940675,0.00017598622,0.9846501,0.00008318259,0.00025238236,0.010179028],"study_design_scores_gemma":[0.00030973257,0.00809909,0.006401603,0.000023425357,0.00006572574,0.0005403136,0.000034734167,0.0010041845,0.979494,0.000052389238,0.00396804,0.0000067200667],"about_ca_topic_score_codex":0.0006698923,"about_ca_topic_score_gemma":0.00061597215,"teacher_disagreement_score":0.0042344998,"about_ca_system_score_codex":0.00018472361,"about_ca_system_score_gemma":0.00025905375,"threshold_uncertainty_score":0.014165819},"labels":[],"label_agreement":null},{"id":"W4313385736","doi":"10.4049/jimmunol.196.supp.208.10","title":"Over-expression of CD200 protects mice from dextran sodium sulfate induced colitis","year":2016,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Social Innovation; University of Toronto","funders":"","keywords":"Colitis; Inflammatory bowel disease; Inflammation; FOXP3; IL-2 receptor; Immunology; Ulcerative colitis; Proinflammatory cytokine; Genetically modified mouse; Chemistry; Medicine; Molecular biology; Biology; Pathology; Transgene; T cell; Immune system; Biochemistry","score_opus":0.013516618062028215,"score_gpt":0.2175329106448404,"score_spread":0.20401629258281218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313385736","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99589765,0.0010726986,0.0010188429,0.00013352277,0.00004685848,0.000040114675,0.0006820012,0.00026403746,0.0008443114],"genre_scores_gemma":[0.9908372,0.0011390437,0.0019233183,0.00017783282,0.00003407718,0.00009169969,0.0015068321,0.00007832233,0.004211682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997563,0.00003935285,0.000029433306,0.000051929022,0.000046626985,0.000076349796],"domain_scores_gemma":[0.9994011,0.00004854025,0.00019952451,0.000052904237,0.00003002509,0.00026792864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000234308,0.0008433633,0.0007333272,0.0007522033,0.00015893872,0.00037472416,0.00030977506,0.0007682699,0.001935742],"category_scores_gemma":[0.0001614437,0.0003692908,0.0003529391,0.00025049085,0.0003176662,0.00030003855,0.0002342593,0.0012205266,0.00072242145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064917473,0.0002030114,0.00022918716,0.0000380043,0.000009911291,0.000055148415,0.000009172321,0.000049469054,0.9979578,0.000035310943,0.00006682078,0.0006969479],"study_design_scores_gemma":[0.0002999612,0.006947915,0.01564137,0.000054307333,0.00008637787,0.0007613572,0.000066928485,0.0015855362,0.97179157,0.00011470294,0.002626051,0.00002395913],"about_ca_topic_score_codex":0.00037580094,"about_ca_topic_score_gemma":0.00053880666,"teacher_disagreement_score":0.001935742,"about_ca_system_score_codex":0.00023659939,"about_ca_system_score_gemma":0.00021191547,"threshold_uncertainty_score":0.0064757466},"labels":[],"label_agreement":null},{"id":"W4313386411","doi":"10.4049/jimmunol.190.supp.136.25","title":"Over-expression of CD200 protects mice from dextran sodium sulfate induced colitis (P3286)","year":2013,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Colitis; Inflammation; Immunosuppression; Genetically modified mouse; Immunology; FOXP3; Azoxymethane; Medicine; Cancer research; Chemistry; Transgene; Biology; Endocrinology; Internal medicine; Cancer; Colorectal cancer; Immune system; Biochemistry","score_opus":0.012036412936239133,"score_gpt":0.21048430852823513,"score_spread":0.198447895591996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313386411","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964246,0.00057656877,0.0008801192,0.00014157887,0.000035940826,0.00002938708,0.00065992516,0.00022872901,0.0010230624],"genre_scores_gemma":[0.9900692,0.0006800237,0.0016195058,0.0001265557,0.000020197549,0.000055927645,0.0012927098,0.000060947536,0.006074975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998431,0.000018914705,0.000016895632,0.000033504726,0.000032398508,0.00005509853],"domain_scores_gemma":[0.999736,0.00001778238,0.000088718865,0.000024105148,0.000012852217,0.000120587596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00013716171,0.00053918763,0.0003836923,0.00049411197,0.0001416625,0.00029062017,0.00018380754,0.0005800102,0.0022625218],"category_scores_gemma":[0.0000839476,0.00024193162,0.00023698478,0.00020939297,0.00024374638,0.00019499917,0.0001737304,0.0009263155,0.00080073875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055895734,0.00020879989,0.00017307048,0.000027761718,0.0000053060166,0.000042740136,0.0000069333837,0.000042559866,0.99795866,0.000036449586,0.00007131319,0.0008673846],"study_design_scores_gemma":[0.00016992699,0.0048423978,0.01175643,0.000028244507,0.000037558002,0.0005276787,0.000048235783,0.0009775715,0.97909755,0.00007848354,0.0024241295,0.000011777746],"about_ca_topic_score_codex":0.00045013576,"about_ca_topic_score_gemma":0.0005965002,"teacher_disagreement_score":0.0022625218,"about_ca_system_score_codex":0.00017493838,"about_ca_system_score_gemma":0.00019869392,"threshold_uncertainty_score":0.0075689554},"labels":[],"label_agreement":null},{"id":"W4313405938","doi":"10.4049/jimmunol.208.supp.110.04","title":"CD200 is required to control LPS-induced lung inflammation.","year":2022,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"ARDS; Bronchoalveolar lavage; Proinflammatory cytokine; Medicine; Inflammation; Chemokine; Lung; CXCL2; CXCL1; Immunology; Tumor necrosis factor alpha; Internal medicine; Chemokine receptor","score_opus":0.012554379097869335,"score_gpt":0.23008194904989573,"score_spread":0.2175275699520264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313405938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9782736,0.0050556175,0.006936706,0.00054339843,0.00022137525,0.00007792917,0.0029815428,0.00056516053,0.005344789],"genre_scores_gemma":[0.9857459,0.0009019563,0.002911349,0.00024759534,0.000030592888,0.00007619163,0.0031891365,0.0000616661,0.006835554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99984646,0.00001554679,0.000012946247,0.000041310894,0.00004037672,0.000043220927],"domain_scores_gemma":[0.999819,0.000013792558,0.00005662628,0.000019209503,0.000025467225,0.000065900276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000086366206,0.0003645892,0.00022612434,0.00024814135,0.00017489685,0.0003635958,0.00027294015,0.00051163597,0.003610463],"category_scores_gemma":[0.00012479609,0.00012186696,0.00026048056,0.00014508232,0.00019691877,0.00025293225,0.0002461683,0.0006367135,0.0015505827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023262073,0.000035488818,0.000184657,0.00006312247,0.000005431383,0.000100215184,0.0000061894916,0.00003743625,0.997654,0.0001536399,0.00021676229,0.001310413],"study_design_scores_gemma":[0.00008004051,0.0003044871,0.011396325,0.000025351008,0.000023261728,0.0011699806,0.000043161905,0.0014469773,0.9711014,0.00019307,0.014206131,0.000009889101],"about_ca_topic_score_codex":0.0004048983,"about_ca_topic_score_gemma":0.00042763553,"teacher_disagreement_score":0.003610463,"about_ca_system_score_codex":0.00038758622,"about_ca_system_score_gemma":0.00018371711,"threshold_uncertainty_score":0.012078226},"labels":[],"label_agreement":null},{"id":"W4313429244","doi":"10.4049/jimmunol.178.supp.101.1","title":"Susceptibility of PIR-B deficient mice to Salmonella infection (101.1)","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Aging","funders":"","keywords":"Spleen; Biology; Immunology; Microbiology; Sepsis; Myeloid; Ex vivo; In vivo","score_opus":0.013712647161109138,"score_gpt":0.2451336000192795,"score_spread":0.23142095285817035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313429244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992955,0.00067138707,0.0018167933,0.00019456283,0.00007918943,0.00009035509,0.002911261,0.00022655491,0.0010549431],"genre_scores_gemma":[0.9781616,0.000920181,0.0032815463,0.0003447061,0.00007430532,0.0004288145,0.005040544,0.00028899717,0.011459496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993331,0.000076833276,0.0000845632,0.00021555125,0.00010693971,0.00018294311],"domain_scores_gemma":[0.9986135,0.00016077525,0.00051359885,0.00010690368,0.00006304894,0.00054217264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047405335,0.0013944987,0.00072173745,0.001903658,0.00036508794,0.0007914927,0.0005696863,0.0017298121,0.007088208],"category_scores_gemma":[0.0004227762,0.0009135198,0.0007715116,0.00038517875,0.0006880249,0.00056118984,0.00059193594,0.0023075938,0.0020551444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011438599,0.00032977032,0.0005652576,0.00005814124,0.000019207955,0.0001876638,0.00003580598,0.000082614475,0.99664176,0.00012786189,0.000107592285,0.00070033007],"study_design_scores_gemma":[0.0009161405,0.01633891,0.06396232,0.00017615521,0.00020352677,0.0066479933,0.0005197409,0.0032064863,0.9009185,0.0006753067,0.006322997,0.00011203654],"about_ca_topic_score_codex":0.0004953688,"about_ca_topic_score_gemma":0.00033110214,"teacher_disagreement_score":0.007088208,"about_ca_system_score_codex":0.00043993772,"about_ca_system_score_gemma":0.00019787945,"threshold_uncertainty_score":0.023712456},"labels":[],"label_agreement":null},{"id":"W4313533089","doi":"10.1136/lupus-2022-lupus21century.14","title":"402 Serum cytokine profiling reveals elevated levels of S100A8/A9 and MMP-9 in systemic lupus erythematosus patients with cognitive impairment independently of disease activity and inflammatory markers","year":2022,"lang":"en","type":"article","venue":"","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Work & Health; Toronto Western Hospital; Toronto Rehabilitation Institute; University of Calgary; Krembil Foundation; University of Toronto; University Health Network","funders":"","keywords":"Medicine; Internal medicine; Cytokine; Immunology; Logistic regression; Systemic lupus erythematosus; Pathogenesis; Rank correlation; Disease; Neuropsychology; Cognition; Psychiatry","score_opus":0.0077139011825863475,"score_gpt":0.20285226969923595,"score_spread":0.1951383685166496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313533089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995152,0.00010115438,0.00004053249,0.000013454761,0.0000027358165,0.0000048565403,0.000083653526,0.0000028205131,0.00023566137],"genre_scores_gemma":[0.99969566,0.000037377446,0.000059633658,0.000020048039,0.000006928027,0.0000039400766,0.00008595931,6.9474356e-7,0.00008977944],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998838,0.000016461187,0.000025510419,0.000027420885,0.000022052682,0.000024760067],"domain_scores_gemma":[0.9996619,0.000058002544,0.000116623,0.000014699913,0.000040300874,0.000108425564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018369434,0.00028453802,0.00032599227,0.00062285113,0.0002783978,0.00036699884,0.00011151424,0.00036497854,0.0013694037],"category_scores_gemma":[0.00046941233,0.00014876782,0.00024157966,0.00037432482,0.00018547264,0.00019524344,0.0001976639,0.00029911488,0.00033929743],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011839197,0.000162512,0.97797555,0.000029263281,0.0000400122,0.002902462,0.00020524056,0.000046406643,0.013789178,0.000017759574,0.0001803948,0.0034674455],"study_design_scores_gemma":[0.000024049039,0.00035350473,0.99434894,0.000005494476,0.000019687588,0.0040964074,0.00014722426,0.00017434813,0.0006335284,0.00002556384,0.00016645665,0.000004821261],"about_ca_topic_score_codex":0.0011408644,"about_ca_topic_score_gemma":0.0010531162,"teacher_disagreement_score":0.0013694037,"about_ca_system_score_codex":0.00015258083,"about_ca_system_score_gemma":0.000111948175,"threshold_uncertainty_score":0.0045811534},"labels":[],"label_agreement":null},{"id":"W4313826415","doi":"10.3390/cells12020257","title":"Evaluation of Endocan as a Treatment for Acute Inflammatory Respiratory Failure","year":2023,"lang":"en","type":"article","venue":"Cells","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Health Research Foundation","keywords":"ARDS; Medicine; Hypoxemia; Lung; Inflammation; Oxygenation; Diffuse alveolar damage; Acute respiratory distress; Gastroenterology; Internal medicine; Anesthesia; Immunology","score_opus":0.04527702653384635,"score_gpt":0.30913055132656775,"score_spread":0.2638535247927214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313826415","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9661908,0.028911036,0.0014577507,0.00049014593,0.0001996729,0.00025583283,0.0003182164,0.000042515974,0.00213389],"genre_scores_gemma":[0.9836625,0.010976236,0.0027485823,0.000267739,0.000097301294,0.00023441685,0.0003557306,0.000009611007,0.0016478593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998276,0.000047897454,0.000015619735,0.000023386672,0.000059571837,0.000025800646],"domain_scores_gemma":[0.9998056,0.000033548742,0.000056381043,0.000010122176,0.000039358776,0.000055060642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042476394,0.00033254785,0.00038414227,0.00029151342,0.00012728616,0.00035341366,0.00026867387,0.00045228394,0.0015695124],"category_scores_gemma":[0.0002201781,0.000058172318,0.00029529026,0.00019925986,0.00024240057,0.00024041103,0.00013882053,0.0006571759,0.00016838023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.019465566,0.0044226763,0.003491184,0.0017650224,0.00034179195,0.0003317855,0.0000632427,0.00047367343,0.83187133,0.0005423139,0.001116158,0.13611528],"study_design_scores_gemma":[0.003548928,0.1903319,0.035043903,0.00038802237,0.0011541626,0.0011818669,0.00022353465,0.002220947,0.73241276,0.0002500692,0.03319663,0.000047325106],"about_ca_topic_score_codex":0.00015674827,"about_ca_topic_score_gemma":0.00043366104,"teacher_disagreement_score":0.0015695124,"about_ca_system_score_codex":0.00025767946,"about_ca_system_score_gemma":0.00028542784,"threshold_uncertainty_score":0.0052505136},"labels":[],"label_agreement":null},{"id":"W4315779391","doi":"10.1038/s42255-022-00715-5","title":"TREM2hi resident macrophages protect the septic heart by maintaining cardiomyocyte homeostasis","year":2023,"lang":"en","type":"article","venue":"Nature Metabolism","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":195,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Science Foundation of Zhejiang Province; National Key Research and Development Program of China; Institute of Genetics; National Natural Science Foundation of China; Zhejiang University; Sir Run Run Shaw Hospital","keywords":"Homeostasis; Cell biology; Medicine; Biology","score_opus":0.007501079167848497,"score_gpt":0.24104015838216322,"score_spread":0.23353907921431472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4315779391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996249,0.00095623516,0.001556751,0.00010929346,0.000034730594,0.000024161287,0.00016750414,0.00005103825,0.00085125305],"genre_scores_gemma":[0.99581677,0.00040659955,0.0013898723,0.00010596399,0.000026152024,0.00003704651,0.00016237922,0.000007705601,0.0020475285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999347,0.00001556742,0.000006202647,0.000011350767,0.0000096108715,0.000022584783],"domain_scores_gemma":[0.9999287,0.0000052959917,0.000018431032,0.000007580184,0.000008354807,0.00003160884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017876682,0.00023440341,0.00021083721,0.00012754445,0.00012045307,0.00017547699,0.00010251429,0.00018965664,0.0012548933],"category_scores_gemma":[0.00007535822,0.000077088596,0.00009498488,0.00004401667,0.00015058348,0.00014671136,0.00018072937,0.00039107128,0.0002978599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028616743,0.000045524193,0.0003941719,0.00003438435,0.000002544609,0.000044848337,0.0000077406885,0.00002317082,0.9977787,0.000051001018,0.000053482672,0.0012782799],"study_design_scores_gemma":[0.000108352135,0.0034027987,0.028038908,0.00003160648,0.000031922464,0.0010717362,0.00015324507,0.0012523647,0.96201164,0.00021637414,0.003671311,0.000009720855],"about_ca_topic_score_codex":0.0000688969,"about_ca_topic_score_gemma":0.000107837834,"teacher_disagreement_score":0.0012548933,"about_ca_system_score_codex":0.000067502966,"about_ca_system_score_gemma":0.00013008714,"threshold_uncertainty_score":0.0041980147},"labels":[],"label_agreement":null},{"id":"W4361305104","doi":"10.30978/utj2023-1-5","title":"Evaluation of the effects of ethylmethylhydroxypyridine succinate on cognitive function and clinical-functional status of patients with chronic obstructive pulmonary disease and ischemic heart disease","year":2023,"lang":"en","type":"article","venue":"Ukrainian Therapeutical Journal","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Medicine; COPD; Spirometry; Depression (economics); Physical therapy; Pulmonary function testing; Internal medicine; Anxiety; Anthropometry; Hospital Anxiety and Depression Scale; Pulmonary disease; Disease; Asthma; Psychiatry","score_opus":0.02232126866264403,"score_gpt":0.27743519250757437,"score_spread":0.2551139238449303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361305104","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9960821,0.0030643397,0.00004618246,0.000046972847,0.000015818714,0.000029971334,0.000102260834,0.000004920105,0.0006074572],"genre_scores_gemma":[0.9987815,0.0006416545,0.00013024577,0.000051543444,0.000020192287,0.00001439751,0.00011381644,6.716688e-7,0.0002458081],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.999788,0.000088386005,0.000028458264,0.000025535966,0.000042844626,0.000026807747],"domain_scores_gemma":[0.99952376,0.00008821496,0.00015463143,0.00002137265,0.000074278425,0.00013781695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043238697,0.00031805533,0.0005592353,0.0002754353,0.00019487407,0.00017234775,0.0001402828,0.00023370472,0.0009534772],"category_scores_gemma":[0.00068401324,0.00009518417,0.00046921015,0.00021597435,0.00009834405,0.00014250196,0.00017560001,0.000319608,0.00010570611],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.037349954,0.0065462315,0.84585696,0.00078666135,0.0013470857,0.00069486175,0.00034760422,0.00031731432,0.0100506395,0.00003687389,0.0005048658,0.09616092],"study_design_scores_gemma":[0.00053576095,0.025891833,0.9698008,0.00004059304,0.00044726566,0.0004618425,0.00014917979,0.00032108874,0.0014874552,0.000025893713,0.0008270637,0.000011301106],"about_ca_topic_score_codex":0.0007714575,"about_ca_topic_score_gemma":0.0018846733,"teacher_disagreement_score":0.0009534772,"about_ca_system_score_codex":0.000115635165,"about_ca_system_score_gemma":0.00015552968,"threshold_uncertainty_score":0.003189683},"labels":[],"label_agreement":null},{"id":"W4389239921","doi":"10.1158/2326-6074.tumimm23-a015","title":"Abstract A015: Rapid mitochondrial reactive oxygen species production precedes NF-κB activation and pro-inflammatory responses in macrophages","year":2023,"lang":"en","type":"article","venue":"Cancer Immunology Research","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Reactive oxygen species; Proinflammatory cytokine; Chemistry; Cell biology; Mitochondrial ROS; Lipopolysaccharide; Inflammation; NF-κB; Context (archaeology); Pharmacology; Signal transduction; Biochemistry; Immunology; Biology","score_opus":0.0801465144568929,"score_gpt":0.34463482955673336,"score_spread":0.26448831509984044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389239921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86501217,0.0380951,0.036956146,0.0039837197,0.011475996,0.0006020876,0.021425078,0.0026607641,0.019788979],"genre_scores_gemma":[0.9321095,0.0076839933,0.009073773,0.00061169575,0.0011024667,0.00037480737,0.008452119,0.00015873233,0.040432975],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9997379,0.000021072015,0.000035206256,0.000065456945,0.00009339817,0.00004693897],"domain_scores_gemma":[0.9997507,0.000028772802,0.00006495408,0.000023245593,0.0000726852,0.00005961442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030421017,0.00048775505,0.0004903133,0.00064707565,0.00042286672,0.00058120384,0.0004596876,0.00073156157,0.021387523],"category_scores_gemma":[0.0002736802,0.00020844341,0.0005573717,0.0005193804,0.00024824878,0.00071580964,0.00033757897,0.00080016017,0.0051747174],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000842738,0.000080514685,0.0005411352,0.0004418376,0.000013801539,0.00021890002,0.000028092914,0.000043591153,0.99181753,0.00034962696,0.001560105,0.004062007],"study_design_scores_gemma":[0.00016006209,0.0012296127,0.032662895,0.00009266378,0.00006834932,0.0014931291,0.00018032634,0.00096587394,0.9280583,0.0014669261,0.03357697,0.000044826033],"about_ca_topic_score_codex":0.00031589827,"about_ca_topic_score_gemma":0.00022215482,"teacher_disagreement_score":0.021387523,"about_ca_system_score_codex":0.00031511558,"about_ca_system_score_gemma":0.0004208062,"threshold_uncertainty_score":0.0715484},"labels":[],"label_agreement":null},{"id":"W4391745281","doi":"10.1016/j.celrep.2024.113773","title":"THBS1+ myeloid cells expand in SLD hepatocellular carcinoma and contribute to immunosuppression and unfavorable prognosis through TREM1","year":2024,"lang":"en","type":"article","venue":"Cell Reports","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Université de Bordeaux; Fondation ARC pour la Recherche sur le Cancer; Institut National de la Santé et de la Recherche Médicale","keywords":"Myeloid; Hepatocellular carcinoma; Immunology; Inflammation; Cancer research; Immunotherapy; Immunosuppression; Biology; Immune system; Medicine","score_opus":0.010360214548464568,"score_gpt":0.2136833977225414,"score_spread":0.20332318317407685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391745281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9961196,0.0012247928,0.0009938463,0.00011107577,0.000014016161,0.00002872421,0.00017804993,0.000033604047,0.001296291],"genre_scores_gemma":[0.9971667,0.00041546783,0.0005557618,0.000043229284,0.000026186775,0.000023388538,0.00022150086,0.00000518958,0.001542651],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9999107,0.000024579129,0.0000076159154,0.000011179147,0.000020152847,0.00002576421],"domain_scores_gemma":[0.99989116,0.000010437481,0.0000405511,0.000008463468,0.000011980961,0.00003734478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022206081,0.00019443902,0.00014237454,0.00044297287,0.00012259529,0.00019554955,0.000064016094,0.00011776672,0.0030756856],"category_scores_gemma":[0.000117996926,0.00009121289,0.0000977469,0.00013780934,0.00014026248,0.000169962,0.000183286,0.00036056273,0.00051802833],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010907153,0.000097487195,0.03261564,0.00013822809,0.000017306123,0.000690781,0.00008683203,0.00009020332,0.9540328,0.0004862405,0.00037693948,0.010276889],"study_design_scores_gemma":[0.00021840805,0.0020796675,0.40043962,0.000059059406,0.00016894175,0.0082314825,0.00060141546,0.0034579623,0.5636978,0.0012369554,0.019786006,0.000022696693],"about_ca_topic_score_codex":0.00013902175,"about_ca_topic_score_gemma":0.00028486212,"teacher_disagreement_score":0.0030756856,"about_ca_system_score_codex":0.00012231307,"about_ca_system_score_gemma":0.00012986665,"threshold_uncertainty_score":0.010289192},"labels":[],"label_agreement":null},{"id":"W4401825682","doi":"10.24198/jkp.v12i2.2526","title":"Correlation between Neutrophil/Lymphocyte Ratio (NLR), lipid profile, lesion location and vascular cognitive impairment in acute ischemic stroke patients","year":2024,"lang":"en","type":"article","venue":"Jurnal Keperawatan Padjadjaran","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"Universitas Sebelas Maret","keywords":"Montreal Cognitive Assessment; Medicine; Internal medicine; Stroke (engine); Correlation; Neutrophil to lymphocyte ratio; Lipid profile; Cognitive impairment; Hyperlipidemia; Ischemic stroke; Lymphocyte; Physical therapy; Cardiology; Cholesterol; Disease; Ischemia; Endocrinology; Diabetes mellitus","score_opus":0.00877212757210615,"score_gpt":0.22740518932881157,"score_spread":0.2186330617567054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401825682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998575,0.0005669058,0.000047229692,0.000046756842,0.0000073961373,0.000007970004,0.0001914257,0.000002653256,0.0005547113],"genre_scores_gemma":[0.9994273,0.00010795516,0.000051914114,0.000017909582,0.000010943358,0.000008143232,0.0002175167,7.2679086e-7,0.00015756671],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99977726,0.000047121568,0.0000441896,0.00004404739,0.00004575912,0.000041627256],"domain_scores_gemma":[0.9990345,0.00022889221,0.00042245394,0.000042984568,0.00012215364,0.00014901505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037957882,0.00020620196,0.0002728582,0.0005613728,0.00024847873,0.00043783226,0.00017529153,0.0002858175,0.0020429941],"category_scores_gemma":[0.0019333408,0.00013340551,0.00015665339,0.0005027647,0.00013884105,0.00028183567,0.00020186692,0.0004175418,0.0002725979],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012423682,0.000027560576,0.99878234,0.00000717785,0.000018011893,0.00007593944,0.000017133685,0.000017053839,0.00010806786,0.0000053824656,0.00005674203,0.00076037965],"study_design_scores_gemma":[0.000006582423,0.0001480169,0.99885523,0.000005285314,0.000023711134,0.0005645884,0.000069176924,0.00011265441,0.00005753018,0.000027700617,0.0001267838,0.0000026909968],"about_ca_topic_score_codex":0.0010219285,"about_ca_topic_score_gemma":0.0014535354,"teacher_disagreement_score":0.0020429941,"about_ca_system_score_codex":0.00016424747,"about_ca_system_score_gemma":0.0002067869,"threshold_uncertainty_score":0.0068345666},"labels":[],"label_agreement":null},{"id":"W4402204578","doi":"10.1002/hsr2.70044","title":"Endocan as a biomarker for acute respiratory distress syndrome: A systematic review and meta‐analysis","year":2024,"lang":"en","type":"review","venue":"Health Science Reports","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"ARDS; Medicine; Meta-analysis; Confidence interval; Biomarker; Internal medicine; Strictly standardized mean difference; Acute respiratory distress; Gastroenterology; Lung","score_opus":0.09572563047876988,"score_gpt":0.41844214183775935,"score_spread":0.3227165113589895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402204578","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058096973,0.99213094,0.0006086197,0.00020906584,0.00014518642,0.0002769812,0.000604083,0.0000244615,0.00019091238],"genre_scores_gemma":[0.25320023,0.7389268,0.0030011458,0.001062919,0.00038744305,0.0017366768,0.0012427481,0.000037087877,0.00040496117],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.9910802,0.0043614577,0.002298585,0.0010301971,0.00089251745,0.00033710862],"domain_scores_gemma":[0.98268557,0.012558063,0.002552167,0.0005988454,0.00135297,0.0002523409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011996788,0.00283283,0.017198103,0.0063782036,0.0007393728,0.0032744668,0.0021639697,0.0022706264,0.004155322],"category_scores_gemma":[0.025954861,0.0014653228,0.03745861,0.00765441,0.00070286135,0.0016303369,0.0014997557,0.0018463657,0.00033853488],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001330735,0.000028894725,0.006609119,0.31720245,0.6666777,0.00012694621,0.00006374082,0.0005126147,0.00018883045,0.00010638187,0.0004912813,0.0066613965],"study_design_scores_gemma":[0.00029266454,0.00014503582,0.004345652,0.016652942,0.9770752,0.00007681146,0.000034409262,0.00019568717,0.00007972502,0.00011843643,0.00096442265,0.000018923769],"about_ca_topic_score_codex":0.0065020574,"about_ca_topic_score_gemma":0.013031543,"teacher_disagreement_score":0.017198103,"about_ca_system_score_codex":0.0022045444,"about_ca_system_score_gemma":0.0034911928,"threshold_uncertainty_score":0.063445866},"labels":[],"label_agreement":null},{"id":"W4404237231","doi":"10.1093/neuonc/noae165.0909","title":"NCOG-27. HIGHER LEVELS OF SERUM ICAM-1 AND IL-10 ARE ASSOCIATED WITH COGNITIVE DYSFUNCTION IN BOTH IDH-WILDTYPE AND IDH-MUTANT GLIOMA","year":2024,"lang":"en","type":"article","venue":"Neuro-Oncology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Wild type; Mutant; Glioma; Biology; Cancer research; Genetics; Gene","score_opus":0.01978293145703199,"score_gpt":0.24633273726975163,"score_spread":0.22654980581271963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404237231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99882406,0.00017327773,0.00008839018,0.000026932968,0.000009000926,0.0000075733624,0.0003443196,0.000009366189,0.00051701633],"genre_scores_gemma":[0.9990557,0.000043883734,0.00008556514,0.000017777702,0.0000048352626,0.000006121468,0.00042743928,0.0000023727916,0.00035632018],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9999043,0.000008397882,0.000009984551,0.000026546011,0.000022462307,0.000028391469],"domain_scores_gemma":[0.999622,0.000025383773,0.0001713381,0.00001636432,0.000039511247,0.0001252965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012697207,0.00034127175,0.00026255604,0.0005058496,0.0002534092,0.000384937,0.00020243398,0.0002596212,0.001940699],"category_scores_gemma":[0.0004279842,0.000097623386,0.0002227247,0.00034027148,0.00019594446,0.00011916417,0.0002112326,0.0003484793,0.00031526343],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015312902,0.00011789667,0.97572154,0.000028392345,0.0000687204,0.0010177994,0.00005889391,0.000051691688,0.01716974,0.00005036354,0.00035868693,0.0038249388],"study_design_scores_gemma":[0.00001772046,0.00020344788,0.9951049,0.000005025942,0.000030686406,0.0023621828,0.0000880184,0.0001519075,0.0015621013,0.00005672553,0.0004135887,0.0000036127933],"about_ca_topic_score_codex":0.0027353235,"about_ca_topic_score_gemma":0.0023180742,"teacher_disagreement_score":0.0027353235,"about_ca_system_score_codex":0.0002875057,"about_ca_system_score_gemma":0.00019506777,"threshold_uncertainty_score":0.006492257},"labels":[],"label_agreement":null},{"id":"W4404620909","doi":"10.3389/fnagi.2024.1463065","title":"Higher soluble TREM-1 levels are associated with cognitive impairment after acute ischemic stroke","year":2024,"lang":"en","type":"article","venue":"Frontiers in Aging Neuroscience","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Montreal Cognitive Assessment; Medicine; Quartile; Confounding; Internal medicine; Confidence interval; Stroke (engine); Odds ratio; Cognition; Ischemic stroke; Cognitive impairment; Psychiatry; Ischemia; Disease","score_opus":0.014438246077385532,"score_gpt":0.2302576068210403,"score_spread":0.21581936074365476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404620909","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9993728,0.0002297333,0.000058374324,0.000026801368,0.0000044872436,0.0000037998866,0.00011262972,0.0000040947943,0.00018724159],"genre_scores_gemma":[0.99957544,0.00008353906,0.000075868804,0.000012402357,0.000016973172,0.0000039612573,0.00011164251,0.0000011056388,0.00011900604],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99979466,0.00004257673,0.000030102583,0.000039703897,0.000043670832,0.000049331262],"domain_scores_gemma":[0.99840647,0.00022504583,0.0009606296,0.00006327173,0.000118770324,0.00022590315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004917809,0.00037805774,0.00036075784,0.00068136817,0.00032421848,0.00045088987,0.00029539753,0.00038801282,0.0021019783],"category_scores_gemma":[0.0019274224,0.00015839151,0.0003280578,0.00058059924,0.0002265607,0.00020738835,0.00034724397,0.0005359174,0.0002536207],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00116201,0.00011765739,0.9943282,0.00003247666,0.00009087281,0.0002531161,0.000052651667,0.0001028499,0.00096788147,0.000027529193,0.00011197755,0.00275285],"study_design_scores_gemma":[0.000011251628,0.00014967016,0.99881905,0.000004232491,0.000028227087,0.00045437782,0.000036257676,0.00026841537,0.000115322306,0.00004756279,0.0000620131,0.0000035101298],"about_ca_topic_score_codex":0.00090775674,"about_ca_topic_score_gemma":0.00091071404,"teacher_disagreement_score":0.0021019783,"about_ca_system_score_codex":0.00017039785,"about_ca_system_score_gemma":0.00020811631,"threshold_uncertainty_score":0.007031858},"labels":[],"label_agreement":null},{"id":"W4406379619","doi":"10.3389/fnagi.2024.1481526","title":"Association of CSF soluble TREM1 levels with hippocampal atrophy in cognitively impaired older adults","year":2025,"lang":"en","type":"article","venue":"Frontiers in Aging Neuroscience","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; National Institutes of Health; Genentech; IXICO; H. Lundbeck A/S; Servier; Eisai; Northern California Institute for Research and Education; F. Hoffmann-La Roche; University of Southern California; Biogen; Eli Lilly and Company; Bristol-Myers Squibb; BioClinica; U.S. Department of Defense; Meso Scale Diagnostics; Alzheimer's Disease Neuroimaging Initiative; Novartis Pharmaceuticals Corporation; Pfizer; National Institute on Aging; Alzheimer's Association","keywords":"Atrophy; Hippocampal formation; Hippocampus; Medicine; Association (psychology); Internal medicine; Neuroscience; Endocrinology; Psychology","score_opus":0.008387053284819626,"score_gpt":0.21719310243986842,"score_spread":0.2088060491550488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406379619","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99939156,0.00030481617,0.000020787676,0.000016401335,0.0000027743058,0.0000030246454,0.00013319215,0.000002065296,0.00012547293],"genre_scores_gemma":[0.99960464,0.000094041265,0.00006011298,0.0000121889325,0.0000075210232,0.0000042627967,0.00012884082,4.993522e-7,0.000087963934],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99988127,0.000020448475,0.000018704295,0.000032506305,0.000027124519,0.000019880106],"domain_scores_gemma":[0.9991109,0.000110893096,0.0004937071,0.000047180158,0.0001272957,0.0001100721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000446928,0.00036450595,0.00032975856,0.00065582135,0.00033335757,0.00037771135,0.00030102133,0.00044092897,0.0010592948],"category_scores_gemma":[0.001464352,0.00016263108,0.0002531728,0.00046192564,0.0001821645,0.00022848358,0.00032035017,0.0003841591,0.0001387271],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004320828,0.000041776522,0.99711144,0.000024071345,0.00006657127,0.00013271463,0.0000767684,0.00003234449,0.00051474065,0.000008915618,0.00006075707,0.0014977573],"study_design_scores_gemma":[0.0000048861025,0.00009476218,0.9994747,0.000003941257,0.000022928643,0.0001934325,0.000043856027,0.000068486435,0.00004478106,0.000010386425,0.000036428064,0.0000013955146],"about_ca_topic_score_codex":0.0029476255,"about_ca_topic_score_gemma":0.0038991338,"teacher_disagreement_score":0.0029476255,"about_ca_system_score_codex":0.00016673177,"about_ca_system_score_gemma":0.00014248877,"threshold_uncertainty_score":0.0058609247},"labels":[],"label_agreement":null},{"id":"W4406576330","doi":"10.1016/s1553-3212(12)70094-8","title":"10.1016/s1553-3212(12)70094-8","year":2000,"lang":"en","type":"article","venue":"Time to knit","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"","funders":"","keywords":"Vasculitis; Medicine; Neuroscience; Psychology; Internal medicine; Disease","score_opus":0.005517156775172757,"score_gpt":0.15700433786664206,"score_spread":0.1514871810914693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406576330","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000465369,0.000696836,0.00075333397,0.00053192844,0.0005025499,0.00013089458,0.0009326586,0.0008924631,0.99509406],"genre_scores_gemma":[0.00048819493,0.00026151846,0.00034949777,0.0002435991,0.00012594994,0.000069755246,0.00043601188,0.00013590604,0.9978896],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99918157,0.00005150678,0.00007141835,0.0003004274,0.00021533633,0.00017960907],"domain_scores_gemma":[0.9973327,0.00062537665,0.00018183842,0.00027911115,0.0004243571,0.0011566771],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014861561,0.003702096,0.0025335564,0.003108649,0.002825747,0.004800472,0.0039474685,0.0072410884,0.9902023],"category_scores_gemma":[0.0018422971,0.0013091798,0.0020386036,0.0024715967,0.002489165,0.0062796664,0.0040478525,0.0037616345,0.9933535],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006462566,0.00033195008,0.0007254634,0.000946031,0.000051427138,0.00029594923,0.00011450312,0.0005511045,0.002887807,0.005566136,0.37449637,0.613387],"study_design_scores_gemma":[0.00009126029,0.00017924543,0.0007324004,0.0003527306,0.000015655049,0.00038123122,0.00011155807,0.00020434172,0.00044947467,0.0007414387,0.9967127,0.00002800455],"about_ca_topic_score_codex":0.0028689888,"about_ca_topic_score_gemma":0.0024816191,"teacher_disagreement_score":0.009797692,"about_ca_system_score_codex":0.0013396951,"about_ca_system_score_gemma":0.0013788963,"threshold_uncertainty_score":0.013975143},"labels":[],"label_agreement":null},{"id":"W4407387327","doi":"10.1093/ijnp/pyae059.368","title":"CLINICAL VALUE OF PLASMA SOLUBLE TREM2 IN IDENTIFYING MILD COGNITIVE IMPAIRMENT: A COMMUNITY-BASED STUDY OF THE CHINESE ELDERLY","year":2025,"lang":"en","type":"article","venue":"The International Journal of Neuropsychopharmacology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"TREM2; Cognitive impairment; Value (mathematics); Cognition; Psychology; Medicine; Clinical psychology; Psychiatry; Internal medicine; Statistics; Mathematics; Receptor","score_opus":0.03606168119100338,"score_gpt":0.3754941103446431,"score_spread":0.3394324291536397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407387327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.999711,0.00004669228,0.00003549361,0.000016214708,0.0000031139427,0.00001073904,0.000057266712,0.0000010392155,0.00011847575],"genre_scores_gemma":[0.9996662,0.00003466803,0.00004758298,0.000028027838,0.000008407774,0.000010337144,0.00008411371,4.577603e-7,0.00012015686],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99973375,0.000047177793,0.000033795382,0.00008082727,0.00005328394,0.000051067433],"domain_scores_gemma":[0.9995927,0.00004310718,0.00008212235,0.000038503927,0.000077286066,0.00016622097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006503264,0.00053433294,0.00048270755,0.0010116734,0.001178809,0.00039502367,0.00030205998,0.00055336906,0.0010022145],"category_scores_gemma":[0.00095474994,0.00035857625,0.00042526308,0.0008457421,0.00041777533,0.00038844047,0.00038753613,0.00034861756,0.00017962232],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015827575,0.000085239524,0.99764097,0.000012549267,0.00004807874,0.0001984443,0.00024317382,0.00002260217,0.00065779494,0.000008317079,0.00004431929,0.000880174],"study_design_scores_gemma":[0.000012990015,0.00012523921,0.999223,0.0000023666796,0.000023810271,0.00016630454,0.00022813444,0.00010819001,0.000041194795,0.000013120019,0.000052256284,0.000003349351],"about_ca_topic_score_codex":0.01578902,"about_ca_topic_score_gemma":0.015188821,"teacher_disagreement_score":0.01578902,"about_ca_system_score_codex":0.00039881523,"about_ca_system_score_gemma":0.00048027546,"threshold_uncertainty_score":0.031394243},"labels":[],"label_agreement":null},{"id":"W4408863138","doi":"10.21203/rs.3.rs-6222217/v1","title":"TREM2 expression is differentially associated with microglia and hematogenous monocyte/macrophages proximally and distally located to amyloid plaques","year":2025,"lang":"en","type":"preprint","venue":"Research Square","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Western University","funders":"","keywords":"TREM2; Microglia; Monocyte; Amyloid (mycology); Expression (computer science); Macrophage; Cell biology; Pathology; Amyloid β; Phagocytosis; Biology; Chemistry; Immunology; Medicine; Inflammation; Disease; Computer science; Genetics; In vitro","score_opus":0.030274981059649958,"score_gpt":0.31016985178898765,"score_spread":0.2798948707293377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408863138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9955161,0.0008004064,0.0014852239,0.00005449767,0.0000180745,0.00001118155,0.0006358828,0.000034078283,0.0014446093],"genre_scores_gemma":[0.9882355,0.0006297582,0.0018821988,0.000081443664,0.00005960324,0.000047318747,0.0015890363,0.000031849293,0.007443361],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998204,0.000021174217,0.000006755203,0.000048087324,0.00003153361,0.00007198022],"domain_scores_gemma":[0.9998692,0.000014032113,0.00004023733,0.0000109623015,0.000028686914,0.000036715974],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017160819,0.00028385522,0.00027843256,0.00059797394,0.00031920936,0.000521595,0.00014322285,0.00036925505,0.003696957],"category_scores_gemma":[0.00022852629,0.00022875343,0.00026200965,0.00025089047,0.00022881472,0.00024328947,0.00037198287,0.00042520065,0.0012031576],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011467219,0.000030988846,0.00688556,0.000092728835,0.000022478076,0.00036058406,0.00010763454,0.00004289388,0.9887706,0.00018850408,0.00015662063,0.0021945965],"study_design_scores_gemma":[0.000083322266,0.00049061247,0.6215729,0.00006397783,0.00013216308,0.0043652356,0.0010559257,0.0014508619,0.36367568,0.00071933033,0.006357589,0.000032388514],"about_ca_topic_score_codex":0.0004183472,"about_ca_topic_score_gemma":0.0005642341,"teacher_disagreement_score":0.003696957,"about_ca_system_score_codex":0.00014170358,"about_ca_system_score_gemma":0.0001295746,"threshold_uncertainty_score":0.012367547},"labels":[],"label_agreement":null},{"id":"W4410951186","doi":"10.1371/journal.pntd.0013084","title":"Soluble triggering receptor expressed on myeloid cells 1 is associated with hemoconcentration and endothelial activation in children and young adults with dengue virus infection in the Philippines","year":2025,"lang":"en","type":"article","venue":"PLoS neglected tropical diseases","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network; University of British Columbia","funders":"Canadian Institutes of Health Research; Canada Research Chairs; BC Children's Hospital; Rotary Foundation","keywords":"Hemoconcentration; Dengue fever; Endothelial activation; Medicine; Immunology; Inflammation; Dengue virus; Systemic inflammation; Leukocytosis; Internal medicine; Myeloid; Proinflammatory cytokine","score_opus":0.005131622540657331,"score_gpt":0.18664857831966064,"score_spread":0.18151695577900331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410951186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9995813,0.000165138,0.000021845552,0.00002367744,0.0000016251126,0.0000029657929,0.000087355715,0.0000018847053,0.000114309994],"genre_scores_gemma":[0.9997404,0.00007616416,0.000038057555,0.000008554841,0.0000034975253,0.0000027047588,0.000092238995,5.38628e-7,0.000037938695],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9998178,0.00004108835,0.00001962519,0.000038544265,0.000037379123,0.000045514415],"domain_scores_gemma":[0.9992962,0.000061535604,0.000412959,0.000018381803,0.000071413604,0.0001395594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020871905,0.00028639418,0.00020272468,0.00044514163,0.00027525655,0.00030274788,0.00018721102,0.00020496975,0.0013109467],"category_scores_gemma":[0.00089046004,0.00016606507,0.00021647263,0.00057187816,0.0002394984,0.00022220924,0.0003028963,0.00040884636,0.00010163323],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025932262,0.0000065254753,0.99880743,0.0000080274585,0.000007715605,0.0003157862,0.00011389692,0.000008614851,0.00019066452,0.0000052227306,0.000039889794,0.00047022087],"study_design_scores_gemma":[0.0000013803867,0.00004367072,0.99845064,0.00000465905,0.0000086416885,0.001023599,0.00028883462,0.000053803113,0.000043270626,0.000006108031,0.000073896364,0.0000014335774],"about_ca_topic_score_codex":0.0059296414,"about_ca_topic_score_gemma":0.005318001,"teacher_disagreement_score":0.0059296414,"about_ca_system_score_codex":0.00029585414,"about_ca_system_score_gemma":0.00033024244,"threshold_uncertainty_score":0.011790276},"labels":[],"label_agreement":null},{"id":"W4412707572","doi":"10.1038/s43856-025-01014-2","title":"Soluble triggering receptor expressed on myeloid cells 1 (sTREM-1) predicts mortality in patients with febrile illness in southern Mozambique","year":2025,"lang":"en","type":"article","venue":"Communications Medicine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto General Hospital; University Health Network","funders":"Agencia Estatal de Investigación; Agencia Española de Cooperación Internacional para el Desarrollo; Instituto de Salud Carlos III; Canadian Institutes of Health Research; European and Developing Countries Clinical Trials Partnership; Universitat de Barcelona; Department of Medicine, University of Toronto; Institució Catalana de Recerca i Estudis Avançats; University of Toronto; European Commission; United States Agency for International Development; Centres de Recerca de Catalunya; Generalitat de Catalunya; London School of Hygiene and Tropical Medicine; HORIZON EUROPE Framework Programme; HORIZON EUROPE Marie Sklodowska-Curie Actions; Government of the United Kingdom","keywords":"Myeloid cells; Myeloid; Receptor; Medicine; Biology; Immunology; Internal medicine","score_opus":0.017128500681974176,"score_gpt":0.24658899421676966,"score_spread":0.22946049353479547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412707572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99905974,0.0003150456,0.00004834021,0.000068986046,0.000004136684,0.000009274887,0.00033249657,0.0000024903954,0.00015950833],"genre_scores_gemma":[0.9995395,0.00008877709,0.00005592323,0.00001443969,0.0000066131033,0.00000849311,0.00023097888,5.04137e-7,0.000054707798],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99981695,0.00004479699,0.000016492375,0.000033870278,0.000024079065,0.00006387694],"domain_scores_gemma":[0.9994404,0.00007068738,0.00029559984,0.000022976887,0.000081665174,0.000088688066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046529467,0.00044130802,0.0002722875,0.00048024664,0.00037209704,0.00045425247,0.00021380457,0.0002863079,0.00085981976],"category_scores_gemma":[0.001555256,0.00019282226,0.00025289005,0.00051884796,0.00023314319,0.00018618119,0.00036161262,0.00045088577,0.0001158768],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055228917,0.00000702321,0.9988638,0.000014470376,0.00001605588,0.000044248492,0.000067901645,0.00002637825,0.00019326154,0.0000046008627,0.000103541584,0.0006034916],"study_design_scores_gemma":[0.000006055251,0.000038467668,0.999385,0.00001350122,0.000015208331,0.00009649241,0.00014732375,0.00013996662,0.000026723214,0.000007110539,0.00012238415,0.0000017449304],"about_ca_topic_score_codex":0.028763937,"about_ca_topic_score_gemma":0.043322805,"teacher_disagreement_score":0.028763937,"about_ca_system_score_codex":0.00054662046,"about_ca_system_score_gemma":0.0006702895,"threshold_uncertainty_score":0.05719304},"labels":[],"label_agreement":null},{"id":"W4413177713","doi":"10.7717/peerj.19619","title":"Identification of hub genes and prediction of the ceRNA network in adult sepsis","year":2025,"lang":"en","type":"article","venue":"PeerJ","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Natural Science Foundation of China","keywords":"KEGG; Competing endogenous RNA; Gene; Computational biology; Biology; Identification (biology); Gene co-expression network; Transcriptome; Bioinformatics; Gene expression; Gene ontology; Genetics; RNA; Long non-coding RNA","score_opus":0.007248614767017183,"score_gpt":0.2120957728431753,"score_spread":0.2048471580761581,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413177713","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68163055,0.20726228,0.08064873,0.001276484,0.00019726976,0.000434061,0.02159271,0.00065418234,0.0063037323],"genre_scores_gemma":[0.9149742,0.038295787,0.035626512,0.00020842542,0.00012011095,0.00028390117,0.009650003,0.00003241624,0.00080869213],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9996792,0.00007564043,0.00003749783,0.00010025469,0.00007609263,0.000031176696],"domain_scores_gemma":[0.99899095,0.0004406413,0.0002746427,0.00002555121,0.00021262004,0.00005567766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009855805,0.00042643302,0.0005798985,0.0046037603,0.00020835915,0.0005625691,0.00033094056,0.00032098577,0.0010069482],"category_scores_gemma":[0.0021346128,0.0001049353,0.0006392947,0.0030370366,0.00023607751,0.00042112864,0.0003771639,0.00019028535,0.00020304715],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020841823,0.00026233032,0.24883948,0.031851258,0.0019471972,0.004124649,0.0005937367,0.032718576,0.10011651,0.0056711626,0.010599185,0.56119174],"study_design_scores_gemma":[0.0002424063,0.0017397442,0.61882037,0.005654323,0.008657486,0.0069857603,0.0015543806,0.13686995,0.08333634,0.027112707,0.10875123,0.00027534994],"about_ca_topic_score_codex":0.0009497119,"about_ca_topic_score_gemma":0.0013698936,"teacher_disagreement_score":0.0046037603,"about_ca_system_score_codex":0.00037374842,"about_ca_system_score_gemma":0.00072441454,"threshold_uncertainty_score":0.005212307},"labels":[],"label_agreement":null},{"id":"W4415793620","doi":"10.1161/circ.152.suppl_3.4369077","title":"Abstract 4369077: Postoperative Inflammation Promotes HDL Dysfunction, Disrupting Reverse Cholesterol Transport and Driving Rapid Atherosclerotic Plaque Destabilization","year":2025,"lang":"en","type":"article","venue":"Circulation","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Reverse cholesterol transport; Inflammation; Cholesterol; Foam cell; Efflux; Fibrous cap; Macrophage; In vivo; Randomized controlled trial","score_opus":0.011384875200820774,"score_gpt":0.2213466214600806,"score_spread":0.20996174625925984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415793620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9940739,0.0013859435,0.00086125016,0.00044127635,0.00024405039,0.000078431585,0.0010314861,0.00007224478,0.0018113782],"genre_scores_gemma":[0.98547125,0.001653617,0.0014383408,0.0006430382,0.00025028174,0.00024631433,0.002512781,0.000038232894,0.007746187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999811,0.00002497604,0.00001964974,0.000038942828,0.00004006475,0.000065402885],"domain_scores_gemma":[0.9998584,0.000015414415,0.000027285323,0.0000143130155,0.000018127645,0.00006648491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002674377,0.00052417273,0.00063948083,0.00019464733,0.00027881723,0.00039055676,0.00020940175,0.00046059123,0.007758847],"category_scores_gemma":[0.000103295686,0.00016810303,0.00042249841,0.00020277474,0.00042216384,0.00020768894,0.00027604288,0.0009377112,0.0019375316],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0062672924,0.00075531425,0.0032744042,0.00024171633,0.000038940565,0.000646481,0.000034549175,0.00003751558,0.98124653,0.00016022936,0.0010945122,0.0062024216],"study_design_scores_gemma":[0.0016234813,0.035735637,0.12903166,0.00012036273,0.000347055,0.0064006955,0.0005104994,0.0012471856,0.8079117,0.00047710718,0.01655272,0.00004193925],"about_ca_topic_score_codex":0.00033137656,"about_ca_topic_score_gemma":0.00036653067,"teacher_disagreement_score":0.007758847,"about_ca_system_score_codex":0.00020871687,"about_ca_system_score_gemma":0.00051055494,"threshold_uncertainty_score":0.025955975},"labels":[],"label_agreement":null},{"id":"W4416097169","doi":"10.21203/rs.3.rs-8016030/v1","title":"Calnexin-TREM1 engagement improves tumor antigen presentation and enhances the activation of anti-tumor T cells","year":2025,"lang":"","type":"preprint","venue":"Research Square","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"National Science and Technology Council; Ministry of Education, India; Shanghai Educational Development Foundation; Academia Sinica","keywords":"Cytotoxic T cell; Antigen; Regulator; T cell; Chimeric antigen receptor; Antigen processing; Antigen presentation; Tumor microenvironment; Antigen-presenting cell","score_opus":0.04499212917906207,"score_gpt":0.3511762216101598,"score_spread":0.30618409243109773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416097169","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99180615,0.0017915296,0.0015188849,0.0005854377,0.00021538074,0.000051402127,0.00050601136,0.00018959706,0.0033355453],"genre_scores_gemma":[0.9908695,0.00067229744,0.0011437201,0.00019183221,0.00005687794,0.000034440098,0.00053641293,0.00003659297,0.0064582736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981326,0.000023698321,0.000010795674,0.00003808015,0.000045165005,0.000068955094],"domain_scores_gemma":[0.9998846,0.000015543143,0.000023433304,0.000013294653,0.000011114924,0.00005192187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001470883,0.00028994848,0.00032659422,0.00015703145,0.00014838106,0.00049942697,0.00016008188,0.00047227848,0.005246105],"category_scores_gemma":[0.000196523,0.00010018736,0.00017931685,0.00010214194,0.00018851145,0.00036055566,0.00025320658,0.0014513804,0.0011078353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00095028826,0.00020276468,0.00019501065,0.000084019615,0.000009971922,0.00006266895,0.000017800692,0.00012540634,0.99251735,0.0001575413,0.0005475999,0.0051295036],"study_design_scores_gemma":[0.00014641316,0.0011502792,0.004016679,0.000010844179,0.000024474935,0.0002821695,0.00004331545,0.0008534648,0.9872793,0.00018288003,0.0060034264,0.00000668777],"about_ca_topic_score_codex":0.0001634223,"about_ca_topic_score_gemma":0.00033380088,"teacher_disagreement_score":0.005246105,"about_ca_system_score_codex":0.0002235649,"about_ca_system_score_gemma":0.00025663056,"threshold_uncertainty_score":0.017549992},"labels":[],"label_agreement":null},{"id":"W6902212999","doi":"10.6084/m9.figshare.4456559.v2","title":"Additional file 3 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Systemic inflammatory response syndrome; MEDLINE; Disease; Immune system","score_opus":0.025020562548596924,"score_gpt":0.2663011267622067,"score_spread":0.24128056421360977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6902212999","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010644979,0.00058393093,0.00017357335,0.00043647242,0.00009646156,0.00034604158,0.99669397,0.00015352397,0.0014094958],"genre_scores_gemma":[0.008688835,0.006707,0.00752266,0.003618036,0.0006267992,0.011024384,0.9261833,0.0008488041,0.034780197],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99875414,0.0002603852,0.0004162352,0.00020699142,0.0002387843,0.000123384],"domain_scores_gemma":[0.9546778,0.03717954,0.002509008,0.0006826721,0.004525335,0.00042567938],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0035916155,0.0015308966,0.002110004,0.006362573,0.0007889791,0.0024822967,0.002040577,0.0017410805,0.85714877],"category_scores_gemma":[0.04475048,0.00081505795,0.0030898652,0.008144365,0.00039010003,0.0032268246,0.0017350015,0.0012117374,0.08977944],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006705984,0.00004676772,0.0010184529,0.14138056,0.00028080738,0.000112190355,0.00015332644,0.00031131553,0.00016227647,0.0010971932,0.8355071,0.019259531],"study_design_scores_gemma":[0.004205678,0.00020650681,0.014152796,0.12321805,0.0015470394,0.000566027,0.0005895066,0.0004864534,0.0005432885,0.006210191,0.84811854,0.00015587804],"about_ca_topic_score_codex":0.010717868,"about_ca_topic_score_gemma":0.016378669,"teacher_disagreement_score":0.14285123,"about_ca_system_score_codex":0.0020977117,"about_ca_system_score_gemma":0.004504269,"threshold_uncertainty_score":0.20375985},"labels":[],"label_agreement":null},{"id":"W6907588148","doi":"10.25316/ir-329","title":"Nanaimo Pride Day 2005","year":2005,"lang":"it","type":"other","venue":"VIURRSpace (Vancouver Island University)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Nucleofection; Gestational period; TSG101; Dysgeusia; Liquation; Diafiltration; Emperipolesis; Triacetin; Durvalumab","score_opus":0.007158744449721637,"score_gpt":0.18691903023780557,"score_spread":0.17976028578808392,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6907588148","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013974248,0.0095911985,0.0004788013,0.017893463,0.019717712,0.0000508624,0.00066441763,0.00035360697,0.9498526],"genre_scores_gemma":[0.00092101994,0.00078472256,0.0000775602,0.000506179,0.00023850205,0.0000042240536,0.000096881406,0.00002749836,0.99734336],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9995364,0.00003197026,0.000008694144,0.00008036701,0.0002375462,0.00010505633],"domain_scores_gemma":[0.9992774,0.00004325548,0.000023600796,0.000042893822,0.0002659139,0.00034703547],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00045697644,0.000581262,0.00039426074,0.0007011877,0.0022414215,0.004130242,0.000604368,0.001675431,0.395468],"category_scores_gemma":[0.0010388264,0.00020308666,0.00027295758,0.00061838207,0.00044838357,0.00073838036,0.0016942347,0.0019047672,0.1573254],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003833098,0.000021939433,0.00013351513,0.000039313916,0.0000027320903,0.00007169726,0.000042410567,0.000027265685,0.00023123641,0.0029390112,0.93020785,0.06624466],"study_design_scores_gemma":[0.0000018788234,0.0000060765524,0.00026760876,0.000021037498,7.98544e-7,0.000022140579,0.000031426178,0.000012829231,0.000065328284,0.0002241446,0.99934524,0.0000015231653],"about_ca_topic_score_codex":0.017387407,"about_ca_topic_score_gemma":0.111252934,"teacher_disagreement_score":0.9826126,"about_ca_system_score_codex":0.0017400741,"about_ca_system_score_gemma":0.0024059159,"threshold_uncertainty_score":0.8622915},"labels":[],"label_agreement":null},{"id":"W6929813062","doi":"10.5281/zenodo.10306533","title":"Fig. 16. Pleuroseta left wings, ventral view. A in A revision of the Australian genus Pleuroseta Richards (Diptera, Sphaeroceridae)","year":2023,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Paratype; Holotype; Genus; Scale (ratio); Key (lock)","score_opus":0.026457001589577662,"score_gpt":0.24100848399067093,"score_spread":0.21455148240109326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6929813062","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20266575,0.021995965,0.056496304,0.0024310583,0.0029110932,0.00082579,0.06966487,0.0067833574,0.6362259],"genre_scores_gemma":[0.6043194,0.0078033195,0.042252045,0.0009365948,0.00043063538,0.00047490935,0.046749465,0.0011809152,0.29585275],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9999175,0.000007999356,0.000005448168,0.000030106456,0.000026668438,0.000012221257],"domain_scores_gemma":[0.99991596,0.000011696282,0.000022884513,0.000014257218,0.000013656902,0.000021469592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007837658,0.0005500449,0.00024196117,0.0011130765,0.00047946905,0.00036773185,0.00026347762,0.00053625467,0.04517108],"category_scores_gemma":[0.00016590348,0.00025670422,0.00040010232,0.0005975258,0.0005605817,0.0005216619,0.0005596048,0.0007641969,0.01606969],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010133114,0.000092517555,0.012911887,0.0030309358,0.0001020572,0.0036803472,0.0007628064,0.0011123684,0.4855845,0.007024712,0.11266243,0.37202215],"study_design_scores_gemma":[0.00006204893,0.00024382428,0.15835722,0.0004067833,0.0000720636,0.0073186224,0.00043613784,0.0007423746,0.023850253,0.0014327624,0.8070373,0.00004067507],"about_ca_topic_score_codex":0.001432819,"about_ca_topic_score_gemma":0.0022487629,"teacher_disagreement_score":0.04517108,"about_ca_system_score_codex":0.00017488135,"about_ca_system_score_gemma":0.00018589277,"threshold_uncertainty_score":0.15111232},"labels":[],"label_agreement":null},{"id":"W6931103630","doi":"10.5281/zenodo.5176260","title":"Repository supporting the implementation of FAIR principles in the IPCC-WGI Atlas","year":2021,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ouranos","funders":"","keywords":"Transparency (behavior); Atlas (anatomy); Work (physics); Information system; Set (abstract data type)","score_opus":0.030012221210854263,"score_gpt":0.2639734109820984,"score_spread":0.23396118977124417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931103630","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0033634494,0.00060901564,0.21451113,0.0043835803,0.0033302312,0.0014624252,0.27559975,0.09680922,0.39993128],"genre_scores_gemma":[0.041123644,0.0012012485,0.19547491,0.0017311099,0.0008670325,0.0023230335,0.5798374,0.054175377,0.123266295],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9867138,0.0032747593,0.0012147317,0.0014510759,0.006183951,0.0011617134],"domain_scores_gemma":[0.9590736,0.0049790437,0.0012945121,0.022685068,0.009622003,0.0023456933],"candidate_categories":["open_science"],"consensus_categories":[],"category_scores_codex":[0.022532193,0.0018474646,0.0017687305,0.008749284,0.0025616211,0.013176022,0.0063838726,0.003980311,0.1321822],"category_scores_gemma":[0.037342165,0.0010947448,0.0018028481,0.010067436,0.0018956087,0.00992015,0.013181281,0.0031148677,0.11042547],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046562002,0.00013143603,0.0022037071,0.001391914,0.00012369972,0.000312608,0.0009474442,0.0068694153,0.0026194698,0.17306434,0.7060766,0.10579383],"study_design_scores_gemma":[0.000042725922,0.000017285896,0.000893915,0.00022040591,0.000020701931,0.00007136287,0.00013815056,0.0017234278,0.0021070098,0.028614918,0.9660777,0.00007244962],"about_ca_topic_score_codex":0.016132139,"about_ca_topic_score_gemma":0.009254865,"teacher_disagreement_score":0.9936161,"about_ca_system_score_codex":0.004267827,"about_ca_system_score_gemma":0.014770127,"threshold_uncertainty_score":0.4421935},"labels":[],"label_agreement":null},{"id":"W6931690418","doi":"10.5281/zenodo.6206478","title":"Rhynchelmis (Rhynchelmoides) bolinensis Fend & Lenat, 2010, n. sp.","year":2010,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Tributary; Fish fin; Appendage; Chondrichthyes","score_opus":0.022881048282385484,"score_gpt":0.2213609790653453,"score_spread":0.1984799307829598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6931690418","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6190846,0.027551273,0.005364998,0.0012015284,0.00040294146,0.00080650684,0.010034206,0.0013050984,0.33424887],"genre_scores_gemma":[0.94025195,0.00844764,0.0058904467,0.0007832439,0.00015577771,0.00033029477,0.0030894903,0.00008778012,0.04096332],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9999062,0.000008431683,0.000009410207,0.0000347524,0.000028329452,0.000012840852],"domain_scores_gemma":[0.9998851,0.000016065598,0.00005785157,0.000011558093,0.000018164888,0.000011358683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011197765,0.0006275202,0.00026564256,0.0013314126,0.0009804309,0.00030881347,0.00041826963,0.00046662492,0.0064572],"category_scores_gemma":[0.0003355601,0.00027690138,0.00011638186,0.0006393913,0.00059273536,0.00087782455,0.0006899655,0.00041460356,0.0044760844],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010188074,0.00018429491,0.11754678,0.0026300023,0.00025245565,0.0069470843,0.005019696,0.002085484,0.15084723,0.006679614,0.052605927,0.6541826],"study_design_scores_gemma":[0.00013810249,0.00030406885,0.6824487,0.0010424231,0.00022743989,0.009848726,0.0025026074,0.00060260773,0.010154751,0.0018707608,0.2907987,0.00006110444],"about_ca_topic_score_codex":0.009639514,"about_ca_topic_score_gemma":0.04967608,"teacher_disagreement_score":0.009639514,"about_ca_system_score_codex":0.00080604217,"about_ca_system_score_gemma":0.00035343843,"threshold_uncertainty_score":0.021601498},"labels":[],"label_agreement":null},{"id":"W6958437839","doi":"10.6084/m9.figshare.18318211","title":"Additional file 3 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Sputum; Airway; Pulmonary disease; Hemosiderin; COPD; Respiratory disease","score_opus":0.00913871427006781,"score_gpt":0.1995689863358587,"score_spread":0.19043027206579088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958437839","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015874379,0.000030767547,0.000108881184,0.0001182088,0.000023104452,0.000058237285,0.9988053,0.00013433804,0.0005624256],"genre_scores_gemma":[0.016039161,0.00037901106,0.0033468031,0.0013134129,0.00030925722,0.0030641516,0.9590217,0.0010484986,0.015477943],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99899954,0.00016870939,0.00019345082,0.00025706083,0.00021415301,0.00016720775],"domain_scores_gemma":[0.9719786,0.022394873,0.0015385798,0.0010362808,0.00243938,0.0006122406],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017862627,0.001232948,0.001961571,0.0020152195,0.0010264775,0.002379931,0.0018836835,0.0015301862,0.8994129],"category_scores_gemma":[0.040357314,0.00075181987,0.0016562799,0.003772846,0.00029652874,0.00205602,0.0012316381,0.0010101502,0.1630139],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007014248,0.000110559384,0.004527228,0.0067128427,0.00012053043,0.00009706862,0.00008307368,0.0004355692,0.000113244816,0.00074113,0.9772702,0.009087293],"study_design_scores_gemma":[0.019280225,0.00074405456,0.08860096,0.014109169,0.00081942143,0.0012165074,0.0008922688,0.0033878249,0.0011893304,0.020397844,0.84901416,0.00034817873],"about_ca_topic_score_codex":0.010168717,"about_ca_topic_score_gemma":0.016801968,"teacher_disagreement_score":0.8994129,"about_ca_system_score_codex":0.0010703402,"about_ca_system_score_gemma":0.0019490005,"threshold_uncertainty_score":0.14347523},"labels":[],"label_agreement":null},{"id":"W6958622403","doi":"10.6084/m9.figshare.26589783.v1","title":"Additional file 1 of Endocan in prediabetes, diabetes, and diabetes-related complications: a systematic review and meta-analysis","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plot (graphics); Bubble; Table (database); Scale (ratio); Current (fluid)","score_opus":0.027057133642662014,"score_gpt":0.22932307575161648,"score_spread":0.20226594210895446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958622403","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008728902,0.0029517205,0.0008847694,0.00035905192,0.00011959217,0.0015742988,0.99164987,0.00033303935,0.0012549382],"genre_scores_gemma":[0.05590692,0.01530865,0.036628865,0.004966629,0.0008769732,0.088981695,0.7523916,0.0021614777,0.042777207],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.99848026,0.0003953472,0.00044670445,0.00031023007,0.00022435847,0.00014308965],"domain_scores_gemma":[0.96892416,0.024876915,0.0033870428,0.0007313135,0.0017885574,0.0002919957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003590998,0.0021531763,0.0042250766,0.007155739,0.00069708214,0.0020290532,0.0017455376,0.00149933,0.7781969],"category_scores_gemma":[0.0430144,0.0011309895,0.00587598,0.00937401,0.0004203644,0.0034281977,0.0013921069,0.0011193841,0.035927884],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019978147,0.00009242569,0.0031324765,0.7108889,0.0042738775,0.00017451833,0.00017936488,0.0010158486,0.00038694518,0.0023108583,0.25761554,0.017931415],"study_design_scores_gemma":[0.046471834,0.0015956741,0.05993586,0.28573138,0.037490018,0.0019062336,0.00080651493,0.0051914714,0.0014302398,0.024759738,0.5340873,0.00059379],"about_ca_topic_score_codex":0.0051523345,"about_ca_topic_score_gemma":0.016256697,"teacher_disagreement_score":0.7781969,"about_ca_system_score_codex":0.002063098,"about_ca_system_score_gemma":0.003495241,"threshold_uncertainty_score":0.3163752},"labels":[],"label_agreement":null},{"id":"W6958626303","doi":"10.6084/m9.figshare.18318217","title":"Additional file 4 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Sputum; Pulmonary disease; Airway; Hemosiderin; COPD; Respiratory disease","score_opus":0.00920875118536705,"score_gpt":0.19988976334823447,"score_spread":0.19068101216286742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6958626303","genre_codex":"dataset","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018407332,0.00003500693,0.00012102821,0.00012776667,0.000025758516,0.00005924015,0.9987311,0.00015144219,0.00056454295],"genre_scores_gemma":[0.019144421,0.00041324482,0.0038751587,0.0013838412,0.000343656,0.0032295226,0.9531301,0.001197061,0.017282927],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.9990121,0.00018417851,0.00017906216,0.00024865416,0.00020017322,0.00017577705],"domain_scores_gemma":[0.9718103,0.022683762,0.0015159841,0.0010492287,0.0023408276,0.0005998845],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001790772,0.0012723076,0.0019508203,0.0020383582,0.0009592144,0.0021772222,0.0019728183,0.0015786227,0.8967444],"category_scores_gemma":[0.03961943,0.0007652948,0.0018034257,0.0037062087,0.0002899778,0.0019669377,0.0011642068,0.0010279983,0.15876643],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007233504,0.00011587162,0.0051601543,0.006565535,0.00013316367,0.00009785445,0.00008291188,0.0004939211,0.00011176353,0.0006928852,0.9763579,0.0094647445],"study_design_scores_gemma":[0.021027837,0.0007816527,0.10595075,0.014825236,0.0009231421,0.0012411347,0.00092433055,0.0041257427,0.0012365867,0.019913536,0.82867336,0.0003766723],"about_ca_topic_score_codex":0.010888818,"about_ca_topic_score_gemma":0.016895592,"teacher_disagreement_score":0.8967444,"about_ca_system_score_codex":0.0010358257,"about_ca_system_score_gemma":0.0018800569,"threshold_uncertainty_score":0.14728153},"labels":[],"label_agreement":null},{"id":"W6976758879","doi":"10.6084/m9.figshare.18318226.v1","title":"Additional file 7 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Sputum; Airway; Pulmonary disease; Hemosiderin; COPD; Respiratory disease","score_opus":0.009159091528491982,"score_gpt":0.19975652157537613,"score_spread":0.19059743004688415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6976758879","genre_codex":"dataset","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018539066,0.000041386138,0.00012323904,0.00014883922,0.00003249197,0.000057146484,0.998642,0.00016791915,0.00060158706],"genre_scores_gemma":[0.021008769,0.00050097174,0.004432389,0.0016968744,0.0004566897,0.003124173,0.9475371,0.0013217061,0.019921323],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988545,0.00022098882,0.00019690295,0.00028281027,0.00023866168,0.000206168],"domain_scores_gemma":[0.9689617,0.024922403,0.0016270612,0.0011576514,0.0026586652,0.0006724143],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018907557,0.0013723602,0.0019513763,0.0021433246,0.0009915191,0.0023802526,0.0021517857,0.0017680774,0.8893038],"category_scores_gemma":[0.042664085,0.00082159566,0.0021816678,0.0035591742,0.00028890898,0.002316545,0.0012529859,0.0011234168,0.15799828],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078277994,0.000113990136,0.0059658224,0.0067765284,0.00017438503,0.00012136802,0.000083215906,0.0005089718,0.00011801147,0.0007149318,0.9753434,0.009296553],"study_design_scores_gemma":[0.022294441,0.0008192501,0.11427119,0.017100967,0.0012382988,0.0015786217,0.0010313706,0.0046023857,0.0013108907,0.021937555,0.8133931,0.0004218193],"about_ca_topic_score_codex":0.011421956,"about_ca_topic_score_gemma":0.018194709,"teacher_disagreement_score":0.8893038,"about_ca_system_score_codex":0.0010322321,"about_ca_system_score_gemma":0.0019752947,"threshold_uncertainty_score":0.15789461},"labels":[],"label_agreement":null},{"id":"W6977102269","doi":"10.6084/m9.figshare.18318211.v1","title":"Additional file 3 of Iron in airway macrophages and infective exacerbations of chronic obstructive pulmonary disease","year":2022,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Sputum; Airway; Pulmonary disease; Hemosiderin; COPD; Respiratory disease","score_opus":0.00913871427006781,"score_gpt":0.1995689863358587,"score_spread":0.19043027206579088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977102269","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015874393,0.000030767576,0.00010888129,0.00011820903,0.000023104498,0.000058237285,0.9988053,0.00013433804,0.0005624259],"genre_scores_gemma":[0.016039152,0.00037901144,0.0033467999,0.0013134135,0.0003092575,0.0030641502,0.9590217,0.0010484986,0.015477943],"study_design_codex":"not_applicable","study_design_gemma":"observational","domain_scores_codex":[0.99899954,0.00016870988,0.0001934512,0.0002570611,0.00021415301,0.00016720808],"domain_scores_gemma":[0.9719786,0.0223949,0.0015385805,0.0010362823,0.0024393823,0.00061224174],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017862618,0.0012329486,0.0019615719,0.0020152223,0.0010264785,0.0023799322,0.0018836841,0.0015301883,0.8994129],"category_scores_gemma":[0.040357366,0.0007518206,0.001656283,0.0037728492,0.00029652903,0.0020560238,0.0012316405,0.0010101522,0.1630139],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007014254,0.000110559384,0.0045272256,0.006712836,0.000120530545,0.00009706862,0.00008307377,0.00043556938,0.000113244605,0.00074112957,0.9772702,0.009087284],"study_design_scores_gemma":[0.01928024,0.00074405456,0.08860096,0.014109182,0.000819423,0.0012165096,0.00089227036,0.0033878284,0.0011893292,0.020397853,0.84901416,0.00034817905],"about_ca_topic_score_codex":0.010168731,"about_ca_topic_score_gemma":0.016801992,"teacher_disagreement_score":0.8994129,"about_ca_system_score_codex":0.0010703402,"about_ca_system_score_gemma":0.0019490015,"threshold_uncertainty_score":0.14347523},"labels":[],"label_agreement":null},{"id":"W6977291875","doi":"10.6084/m9.figshare.26589783","title":"Additional file 1 of Endocan in prediabetes, diabetes, and diabetes-related complications: a systematic review and meta-analysis","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Plot (graphics); Bubble; Table (database); Scale (ratio); Current (fluid)","score_opus":0.027057133642662014,"score_gpt":0.22932307575161648,"score_spread":0.20226594210895446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6977291875","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008728902,0.0029517205,0.0008847694,0.00035905192,0.00011959217,0.0015742988,0.99164987,0.00033303935,0.0012549382],"genre_scores_gemma":[0.05590692,0.01530865,0.036628865,0.004966629,0.0008769732,0.088981695,0.7523916,0.0021614777,0.042777207],"study_design_codex":"systematic_review","study_design_gemma":"not_applicable","domain_scores_codex":[0.99848026,0.0003953472,0.00044670445,0.00031023007,0.00022435847,0.00014308965],"domain_scores_gemma":[0.96892416,0.024876915,0.0033870428,0.0007313135,0.0017885574,0.0002919957],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003590998,0.0021531763,0.0042250766,0.007155739,0.00069708214,0.0020290532,0.0017455376,0.00149933,0.7781969],"category_scores_gemma":[0.0430144,0.0011309895,0.00587598,0.00937401,0.0004203644,0.0034281977,0.0013921069,0.0011193841,0.035927884],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019978147,0.00009242569,0.0031324765,0.7108889,0.0042738775,0.00017451833,0.00017936488,0.0010158486,0.00038694518,0.0023108583,0.25761554,0.017931415],"study_design_scores_gemma":[0.046471834,0.0015956741,0.05993586,0.28573138,0.037490018,0.0019062336,0.00080651493,0.0051914714,0.0014302398,0.024759738,0.5340873,0.00059379],"about_ca_topic_score_codex":0.0051523345,"about_ca_topic_score_gemma":0.016256697,"teacher_disagreement_score":0.7781969,"about_ca_system_score_codex":0.002063098,"about_ca_system_score_gemma":0.003495241,"threshold_uncertainty_score":0.3163752},"labels":[],"label_agreement":null},{"id":"W6981159652","doi":"","title":"Disorienting geographies, unsettled bodies : Anglo-Canadian female Gothic","year":2005,"lang":"en","type":"dissertation","venue":"Queensland's institutional digital repository (The University of Queensland)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Perspective (graphical); Object (grammar); Style (visual arts); Agency (philosophy); Clothing","score_opus":0.007176335726446371,"score_gpt":0.18439553864486286,"score_spread":0.17721920291841647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6981159652","genre_codex":"empirical","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91754925,0.0026379486,0.00020870726,0.0044932067,0.00019621459,0.00003188346,0.0003393247,0.000017509592,0.07452593],"genre_scores_gemma":[0.91533554,0.002511972,0.00032056108,0.00091931014,0.000031516185,0.00001455293,0.0001308941,0.00003534773,0.08070035],"study_design_codex":"qualitative","study_design_gemma":"not_applicable","domain_scores_codex":[0.9994248,0.00006495075,0.000008417312,0.00008260928,0.00013016569,0.0002889268],"domain_scores_gemma":[0.99964786,0.000037999922,0.000040697534,0.000013504422,0.00013184897,0.00012810783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005133807,0.0005319263,0.00048985967,0.001013444,0.021775624,0.004407173,0.00072820793,0.0010435072,0.010217596],"category_scores_gemma":[0.000873143,0.0003960344,0.00019047796,0.0021408775,0.008532547,0.00082922843,0.0016557557,0.0020091343,0.0008043886],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007600945,0.000027646693,0.012758089,0.00007837985,0.000009262734,0.0011273425,0.95525986,0.000036661946,0.00081464153,0.005833491,0.0070698666,0.016908629],"study_design_scores_gemma":[0.0000045141205,0.000032726697,0.042947944,0.00013862374,0.000015629206,0.0006665072,0.87199837,0.000021054353,0.0001654227,0.00039443633,0.08358485,0.000029962477],"about_ca_topic_score_codex":0.9733493,"about_ca_topic_score_gemma":0.9949427,"teacher_disagreement_score":0.026650727,"about_ca_system_score_codex":0.020808225,"about_ca_system_score_gemma":0.015204742,"threshold_uncertainty_score":0.15097499},"labels":[],"label_agreement":null},{"id":"W6995612144","doi":"","title":"Performance of structural systems in fire","year":2009,"lang":"en","type":"article","venue":"NPARC","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":true,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Structural system; Structural stability; Structural integrity; Structural health monitoring","score_opus":0.008839225766332979,"score_gpt":0.20803006280938593,"score_spread":0.19919083704305296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6995612144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9863775,0.000610213,0.007699025,0.0002473899,0.00004679654,0.000030876043,0.00012559045,0.000054029228,0.0048085283],"genre_scores_gemma":[0.99801695,0.00018386471,0.00083852786,0.000013090806,0.0000068014865,0.000006546012,0.00007456254,0.0000058136097,0.00085385866],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9995696,0.00009979282,0.000024877216,0.00006775639,0.00011044669,0.0001274499],"domain_scores_gemma":[0.99931526,0.00012875834,0.00014080174,0.00008933369,0.00020195248,0.00012387245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084346696,0.00042470562,0.00054335623,0.00053490873,0.00089243444,0.0012511541,0.0005261402,0.0006129485,0.0055567133],"category_scores_gemma":[0.0014131294,0.00022542494,0.00031242362,0.00029847334,0.00077724596,0.0012627225,0.0008651856,0.0004762579,0.0007418169],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014390548,0.00052757293,0.10340754,0.0007241576,0.00023798054,0.00086024427,0.00087737344,0.29034033,0.5218231,0.017574642,0.000958672,0.061229236],"study_design_scores_gemma":[0.000082312705,0.0047558504,0.24598077,0.00014819355,0.00021624647,0.0010626239,0.0045721414,0.4722857,0.23036914,0.031503964,0.008824288,0.00019888242],"about_ca_topic_score_codex":0.002400408,"about_ca_topic_score_gemma":0.0025448496,"teacher_disagreement_score":0.0055567133,"about_ca_system_score_codex":0.00079347315,"about_ca_system_score_gemma":0.00063448213,"threshold_uncertainty_score":0.01858902},"labels":[],"label_agreement":null},{"id":"W7112933231","doi":"","title":"Reduced expression of TLR3, TLR10 and TREM1 by human macrophages in Chronic cavitary pulmonary aspergillosis, and novel associations of VEGFA, DENND1B and PLAT","year":2014,"lang":"en","type":"article","venue":"Research Explorer (The University of Manchester)","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"CCPA; TLR3; Gene; Chronic mucocutaneous candidiasis; Receptor; Single-nucleotide polymorphism; Disease; Gene expression","score_opus":0.04379875743022122,"score_gpt":0.26834113578546226,"score_spread":0.22454237835524105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7112933231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9997416,0.00009685392,0.00005546629,0.0000064242536,9.0834016e-7,0.0000017527125,0.00004458593,8.694896e-7,0.000051379007],"genre_scores_gemma":[0.99969816,0.00003490059,0.00007821287,0.000009473162,0.000002606452,0.0000034732827,0.00007716923,6.375293e-7,0.00009538174],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998971,0.000020310496,0.000013475341,0.00003111534,0.000018170582,0.000019867592],"domain_scores_gemma":[0.99982136,0.000033662018,0.000068819405,0.000019506846,0.000022600861,0.00003402999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016210316,0.00016999459,0.00016124954,0.00035102124,0.00016916734,0.00020274884,0.000099639816,0.00026653556,0.0006856063],"category_scores_gemma":[0.00029721626,0.00015397939,0.00015798154,0.00016780997,0.00025991246,0.00007932837,0.00016009486,0.00018874687,0.00012447686],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030447717,0.00012107997,0.39132333,0.000073265364,0.000062685474,0.0015699537,0.00037621442,0.00013493797,0.59972906,0.00006131606,0.00008674554,0.0034165336],"study_design_scores_gemma":[0.000042569176,0.00028555875,0.9784243,0.0000067086,0.00003940506,0.004024999,0.00022998944,0.0004115253,0.016115801,0.000082177496,0.00032994678,0.000006992678],"about_ca_topic_score_codex":0.0007521015,"about_ca_topic_score_gemma":0.00065043115,"teacher_disagreement_score":0.0007521015,"about_ca_system_score_codex":0.000105086,"about_ca_system_score_gemma":0.000071051785,"threshold_uncertainty_score":0.0022935867},"labels":[],"label_agreement":null},{"id":"W7117466878","doi":"10.3390/jpm16010007","title":"Endocan as a Novel Biomarker for Endothelial Dysfunction and Cardiovascular Prognosis in ST-Elevation Myocardial Infarction: A Contemporary Literature Review","year":2025,"lang":"en","type":"article","venue":"Journal of Personalized Medicine","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Red Deer Regional Hospital","funders":"","keywords":"Biomarker; Endothelial dysfunction; TIMI; Myocardial infarction; Coronary artery disease; Clinical significance; Percutaneous coronary intervention; CD31","score_opus":0.025893842390227625,"score_gpt":0.2805082672637361,"score_spread":0.2546144248735085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7117466878","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026525217,0.9992854,0.00004964988,0.00015835669,0.000051178184,0.000007403157,0.000034227738,0.0000024725116,0.0001461581],"genre_scores_gemma":[0.0020718446,0.99743,0.0001476703,0.00013500426,0.00010992203,0.000014261826,0.00004579292,8.226689e-7,0.000044698103],"study_design_codex":"design_other","study_design_gemma":"systematic_review","domain_scores_codex":[0.9989623,0.00016270923,0.00039156122,0.00016324717,0.0002720061,0.00004816258],"domain_scores_gemma":[0.9953176,0.003011302,0.0008629323,0.00006252903,0.0006560455,0.000089611756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018016641,0.00091135857,0.0028295896,0.00846175,0.00046944412,0.0020636427,0.0015670754,0.0014641351,0.0025677704],"category_scores_gemma":[0.004782806,0.00036625925,0.0019052649,0.010032989,0.0007403243,0.002002201,0.00083442056,0.00089113443,0.0004191112],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027802886,0.00012572652,0.0047898865,0.29633194,0.0015188027,0.00056592125,0.00035622934,0.00029180068,0.00073725975,0.0015638267,0.011224585,0.6822159],"study_design_scores_gemma":[0.00016674229,0.0006228489,0.045327347,0.3939258,0.032252785,0.012466058,0.0014521591,0.0010045904,0.001320521,0.0046062325,0.50662094,0.00023399787],"about_ca_topic_score_codex":0.003077527,"about_ca_topic_score_gemma":0.0034984678,"teacher_disagreement_score":0.00846175,"about_ca_system_score_codex":0.00090291584,"about_ca_system_score_gemma":0.0038589987,"threshold_uncertainty_score":0.009528279},"labels":[],"label_agreement":null},{"id":"W7125126869","doi":"10.14309/ctg.0000000000000960","title":"Combining Cytokine-Related Biomarkers to Better Define Tumor Necrosis Factor-α Antagonist Response in Inflammatory Bowel Disease: An Observational Cohort Study","year":2025,"lang":"en","type":"article","venue":"Clinical and Translational Gastroenterology","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Observational study; Cohort study; Tumor necrosis factor alpha; Inflammatory Bowel Diseases; Inflammatory bowel disease; Antagonist; Tumor necrosis factor α; Cohort","score_opus":0.0325207552592851,"score_gpt":0.30473261774087457,"score_spread":0.27221186248158946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7125126869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9988938,0.00033682867,0.00026011677,0.000019137191,0.0000099564995,0.000014428272,0.00036202138,0.0000030263611,0.00010060648],"genre_scores_gemma":[0.99915075,0.00009011048,0.00018369062,0.000023475135,0.000012595941,0.000018539411,0.00045054898,0.0000025277893,0.00006768719],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984579,0.0005083267,0.00016756363,0.00048954744,0.00021165307,0.0001649661],"domain_scores_gemma":[0.9971667,0.000488273,0.0010823619,0.00069564633,0.00022857128,0.00033851367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026386017,0.00047445952,0.0007643473,0.00062259415,0.00056219124,0.001148634,0.0005811894,0.00062482007,0.00094329205],"category_scores_gemma":[0.0029632824,0.00046486396,0.0011325021,0.001172714,0.00033982217,0.0006263413,0.0006025703,0.0009475969,0.00020720316],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000756594,0.00005956992,0.99767715,0.000012915018,0.00040264687,0.000042491985,0.00003967796,0.00004406579,0.00040945536,0.000015720221,0.000059535618,0.00048010447],"study_design_scores_gemma":[0.00007640116,0.00040886214,0.9978771,0.000011113489,0.00035837697,0.0002718042,0.00010725328,0.0004956285,0.00012406716,0.000036589707,0.00022411541,0.000008658909],"about_ca_topic_score_codex":0.0022282752,"about_ca_topic_score_gemma":0.002436298,"teacher_disagreement_score":0.0026386017,"about_ca_system_score_codex":0.00027862855,"about_ca_system_score_gemma":0.00044178325,"threshold_uncertainty_score":0.013954461},"labels":[],"label_agreement":null},{"id":"W7127599771","doi":"10.1093/eurheartj/ehaf784.2036","title":"Common predictors of death in patients with STEMI and NSTEMI during 1st year of postinfarction period","year":2025,"lang":"en","type":"article","venue":"European Heart Journal","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nova Scotia Hospital","funders":"","keywords":"Myocardial infarction; Culprit; Hemostasis; Risk stratification; Platelet; Cause of death","score_opus":0.008118102632326067,"score_gpt":0.2074101346144293,"score_spread":0.19929203198210324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7127599771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99934644,0.00018865947,0.00004155657,0.000038347214,0.0000085028305,0.0000035002536,0.00014346748,0.0000014477981,0.00022817697],"genre_scores_gemma":[0.99952996,0.0000613957,0.000034734152,0.000009376796,0.000016848351,0.0000042759098,0.00023110161,5.5406065e-7,0.00011189986],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99984336,0.000033045304,0.000020230362,0.000034515255,0.000025532168,0.000043237775],"domain_scores_gemma":[0.99938583,0.000112478236,0.00023005487,0.000027373218,0.000054346692,0.00018989113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028187787,0.0002132744,0.0002829088,0.00044434099,0.00031042635,0.0004153536,0.00019417223,0.00034801752,0.001642191],"category_scores_gemma":[0.0012380453,0.00015071104,0.0003682616,0.00036911323,0.00014183336,0.00029836808,0.0003291116,0.00054925506,0.00016891476],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009616508,0.0000150267615,0.9993049,0.000003852117,0.000015367963,0.00006030347,0.00001422594,0.000015338272,0.000044107222,0.000007164906,0.000036901638,0.00038655772],"study_design_scores_gemma":[0.000004632521,0.00010201104,0.99921286,0.0000044347466,0.000017852575,0.00025921362,0.00009229184,0.0001686283,0.000031789194,0.000024446836,0.000079516016,0.0000021917815],"about_ca_topic_score_codex":0.0010325596,"about_ca_topic_score_gemma":0.0017605972,"teacher_disagreement_score":0.001642191,"about_ca_system_score_codex":0.00011732967,"about_ca_system_score_gemma":0.0002045192,"threshold_uncertainty_score":0.0054937005},"labels":[],"label_agreement":null},{"id":"W7127999004","doi":"10.1093/eurheartj/ehaf784.4333","title":"Cognitive function and dementia risk in midlife adults with cardiovascular disease","year":2025,"lang":"en","type":"article","venue":"European Heart Journal","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Cognition; Dementia; Disease; Cognitive decline; Cognitive test; Montreal Cognitive Assessment; Blood pressure; Risk factor","score_opus":0.011174149389379292,"score_gpt":0.21004529510323733,"score_spread":0.19887114571385803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7127999004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.998033,0.0005722755,0.0000624132,0.000060896273,0.000013264999,0.000013824416,0.00057233416,0.0000048284983,0.0006671861],"genre_scores_gemma":[0.9989681,0.0001431231,0.00008629893,0.000059347694,0.000017526489,0.00001621039,0.00038802018,8.475196e-7,0.0003205835],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9997532,0.000051485455,0.000028504044,0.000056361903,0.000050769297,0.00005968767],"domain_scores_gemma":[0.99940455,0.000052030202,0.00020466335,0.000029607261,0.000107200605,0.00020193432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046653865,0.00033280218,0.0003654811,0.0008290606,0.0007039533,0.0009128681,0.0002968736,0.0005565934,0.0018452096],"category_scores_gemma":[0.0013107262,0.00024197614,0.00041896538,0.0007657103,0.0001451778,0.0004499652,0.00056131475,0.00069343887,0.00031841337],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014203678,0.00011572887,0.9981698,0.000010197917,0.000049677103,0.00004013268,0.000076994096,0.000016093747,0.00010781974,0.000009479278,0.00012506248,0.0011370715],"study_design_scores_gemma":[0.0000058519504,0.00011537547,0.9994892,0.000005542878,0.000016923026,0.00007325805,0.000095857926,0.00006429701,0.00002074689,0.000017392531,0.000093505034,0.00000197446],"about_ca_topic_score_codex":0.006351621,"about_ca_topic_score_gemma":0.008574047,"teacher_disagreement_score":0.006351621,"about_ca_system_score_codex":0.00020781354,"about_ca_system_score_gemma":0.00021802347,"threshold_uncertainty_score":0.012629271},"labels":[],"label_agreement":null},{"id":"W7136221767","doi":"10.6084/m9.figshare.4456559","title":"Additional file 3 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Systemic inflammatory response syndrome; MEDLINE; Disease; Immune system","score_opus":0.02701041771664896,"score_gpt":0.2722262293000628,"score_spread":0.24521581158341382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136221767","genre_codex":"dataset","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000107247055,0.0006313629,0.00018159638,0.00045735837,0.00010321819,0.00037806793,0.9965078,0.00015961747,0.0014736524],"genre_scores_gemma":[0.00876207,0.0071037877,0.007893267,0.0037481878,0.0006661326,0.011620245,0.9237895,0.0008910915,0.035525702],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.9987098,0.0002714215,0.00043647518,0.0002121841,0.00024424223,0.00012600863],"domain_scores_gemma":[0.95307946,0.038538247,0.0025648235,0.00071573956,0.004667531,0.00043407927],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.003695024,0.0015499191,0.0021604288,0.006516282,0.00080227206,0.0024964819,0.0020937,0.0017600082,0.85684514],"category_scores_gemma":[0.04524615,0.0008391068,0.0032078216,0.008253171,0.00040211497,0.003252227,0.0017628261,0.0012411198,0.090585515],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006684394,0.000045963377,0.0009480879,0.14528413,0.00028678853,0.00010862264,0.00015511547,0.00030623833,0.00016763266,0.0010821748,0.8313692,0.019577542],"study_design_scores_gemma":[0.0040730042,0.00020466243,0.01351571,0.12582289,0.0015880052,0.0005562463,0.0005771423,0.00047448094,0.000545298,0.0061284686,0.84635854,0.00015565637],"about_ca_topic_score_codex":0.010685896,"about_ca_topic_score_gemma":0.01621296,"teacher_disagreement_score":0.85684514,"about_ca_system_score_codex":0.0021590507,"about_ca_system_score_gemma":0.0046355007,"threshold_uncertainty_score":0.20419294},"labels":[],"label_agreement":null},{"id":"W7136283676","doi":"10.6084/m9.figshare.4456565","title":"Additional file 5 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Systemic inflammatory response syndrome; MEDLINE; Disease; Immune system","score_opus":0.027020763908244625,"score_gpt":0.27238945121278413,"score_spread":0.2453686873045395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136283676","genre_codex":"dataset","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014897855,0.0008274372,0.0001973792,0.00060158316,0.00013742202,0.00068268104,0.99541795,0.00016780838,0.0018187794],"genre_scores_gemma":[0.013004679,0.010168809,0.011825813,0.004896916,0.00082716194,0.023740934,0.8904321,0.00097869,0.044124804],"study_design_codex":"not_applicable","study_design_gemma":"systematic_review","domain_scores_codex":[0.99843425,0.00035524752,0.0005581983,0.000224266,0.00027584872,0.00015216085],"domain_scores_gemma":[0.94604826,0.044205908,0.0030074161,0.00077583257,0.005425498,0.0005370075],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0045671063,0.001539057,0.0023244915,0.0070620934,0.00084956,0.0025568036,0.0020787902,0.0017645807,0.8485888],"category_scores_gemma":[0.05092644,0.00089087547,0.0035578657,0.008666797,0.0004167185,0.0033327055,0.001847359,0.0012899708,0.067237526],"study_design_candidate":"systematic_review","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008697855,0.00005914682,0.0010194015,0.23006421,0.00038136795,0.00012132667,0.00020560039,0.00036657965,0.00016996595,0.0012352105,0.7426192,0.022888234],"study_design_scores_gemma":[0.0059079705,0.00027947864,0.015631195,0.19314839,0.002379549,0.00053154316,0.0007901234,0.0005354269,0.0006117605,0.0062569776,0.77374834,0.00017930183],"about_ca_topic_score_codex":0.011316005,"about_ca_topic_score_gemma":0.019475687,"teacher_disagreement_score":0.8485888,"about_ca_system_score_codex":0.0024780005,"about_ca_system_score_gemma":0.0059991977,"threshold_uncertainty_score":0.21596956},"labels":[],"label_agreement":null},{"id":"W7136394172","doi":"10.6084/m9.figshare.4456553","title":"Additional file 7 of Inflammatory mediators in intra-abdominal sepsis or injury – a scoping review","year":2021,"lang":"","type":"article","venue":"Figshare","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Foothills Medical Centre","funders":"","keywords":"Sepsis; Inflammation; Inflammatory response; MEDLINE; Immune system","score_opus":0.027057454057592516,"score_gpt":0.2724500434462459,"score_spread":0.24539258938865338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7136394172","genre_codex":"dataset","genre_gemma":"dataset","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"dataset","genre_consensus":"dataset","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015650534,0.00092628464,0.00029268788,0.00075776514,0.00017102774,0.0008092508,0.9942889,0.00023353855,0.0023640033],"genre_scores_gemma":[0.013249517,0.012248941,0.014726033,0.0051397677,0.0009084571,0.022724058,0.8707406,0.0011990541,0.059063498],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99859506,0.00035023186,0.00043030412,0.00019098117,0.00029998744,0.00013342887],"domain_scores_gemma":[0.95007885,0.04091363,0.0024622667,0.0008213162,0.0052265865,0.0004973657],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0051936037,0.0013461994,0.0018782135,0.0052349046,0.0007298503,0.0022772125,0.0021010013,0.0016813091,0.851969],"category_scores_gemma":[0.046153344,0.000800841,0.003099464,0.006348468,0.00040223074,0.003083078,0.0016179289,0.0012160463,0.08416778],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00090844027,0.000062815496,0.000707986,0.1486634,0.00029168645,0.000095869465,0.00015399289,0.00027980263,0.00017889231,0.0011471638,0.8227992,0.024710823],"study_design_scores_gemma":[0.0047786725,0.00028953352,0.010727402,0.12280564,0.0018274284,0.00043171315,0.0005611209,0.00039681984,0.0007013671,0.0056678294,0.85167456,0.00013784731],"about_ca_topic_score_codex":0.009048617,"about_ca_topic_score_gemma":0.01655626,"teacher_disagreement_score":0.851969,"about_ca_system_score_codex":0.002119935,"about_ca_system_score_gemma":0.0058376687,"threshold_uncertainty_score":0.2111482},"labels":[],"label_agreement":null},{"id":"W99625482","doi":"10.1096/fasebj.22.1_supplement.1078.19","title":"Lymphoma cell surface expression of CD200 modulates anti‐tumor immunity","year":2008,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Inflammation biomarkers and pathways","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Hospital; University of Toronto","funders":"","keywords":"CTL*; Immunology; Tumor necrosis factor alpha; Cancer research; Biology; Antigen; Tumor progression; Cancer; Medicine; Internal medicine; CD8","score_opus":0.015218773418588474,"score_gpt":0.20464365382394498,"score_spread":0.1894248804053565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W99625482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99726415,0.0011048885,0.00023908156,0.00004038058,0.000008409685,0.000007463668,0.00004275424,0.000019813386,0.0012729614],"genre_scores_gemma":[0.99882084,0.0003580706,0.00010576142,0.000031966996,0.000010182908,0.000006168653,0.00008707574,0.0000024605208,0.0005773455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997799,0.0000531368,0.000010859831,0.000022857559,0.00003847898,0.000094826195],"domain_scores_gemma":[0.9999095,0.00001949246,0.000017988748,0.000009089612,0.000012910211,0.000030988744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011322671,0.0001768038,0.00017562765,0.00022128133,0.000090570466,0.00036337748,0.00008765725,0.00023472747,0.0011832826],"category_scores_gemma":[0.00015363621,0.00006794354,0.00011213707,0.0001211561,0.00012224335,0.00018406288,0.00015301195,0.0004050892,0.0003827565],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019994308,0.000057356756,0.00096057466,0.00002668044,0.000003668783,0.00007110321,0.000021084157,0.000049228558,0.995754,0.000082943094,0.00005431371,0.0027192398],"study_design_scores_gemma":[0.00006241191,0.0012918818,0.030378811,0.000016895076,0.00004426765,0.0005241693,0.00011064945,0.0016733512,0.96182346,0.00015035168,0.0039174,0.0000063563025],"about_ca_topic_score_codex":0.00012781608,"about_ca_topic_score_gemma":0.00023010245,"teacher_disagreement_score":0.0011832826,"about_ca_system_score_codex":0.00025261968,"about_ca_system_score_gemma":0.00008385079,"threshold_uncertainty_score":0.0039584637},"labels":[],"label_agreement":null}]}